Package evaluation to test CliqueTrees on Julia 1.12.4 (422f456051*) started at 2026-01-29T02:34:13.087 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.12` Set-up completed after 9.68s ################################################################################ # Installation # Installing CliqueTrees... Resolving package versions... Installed Collects ─────────── v1.0.0 Installed Inflate ──────────── v0.1.5 Installed AbstractTrees ────── v0.4.5 Installed MacroTools ───────── v0.5.16 Installed OrderedCollections ─ v1.8.1 Installed FixedSizeArrays ──── v1.2.0 Installed SimpleTraits ─────── v0.9.5 Installed ArnoldiMethod ────── v0.4.0 Installed FillArrays ───────── v1.16.0 Installed StaticArrays ─────── v1.9.16 Installed CliqueTrees ──────── v1.12.3 Installed Preferences ──────── v1.5.1 Installed Statistics ───────── v1.11.1 Installed Graphs ───────────── v1.13.4 Installed StaticArraysCore ─── v1.4.4 Installed DataStructures ───── v0.19.3 Installed PrecompileTools ──── v1.3.3 Updating `~/.julia/environments/v1.12/Project.toml` [60701a23] + CliqueTrees v1.12.3 Updating `~/.julia/environments/v1.12/Manifest.toml` [1520ce14] + AbstractTrees v0.4.5 [ec485272] + ArnoldiMethod v0.4.0 [60701a23] + CliqueTrees v1.12.3 [08986516] + Collects v1.0.0 [864edb3b] + DataStructures v0.19.3 [1a297f60] + FillArrays v1.16.0 [3821ddf9] + FixedSizeArrays v1.2.0 [86223c79] + Graphs v1.13.4 [d25df0c9] + Inflate v0.1.5 [1914dd2f] + MacroTools v0.5.16 [bac558e1] + OrderedCollections v1.8.1 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.1 [699a6c99] + SimpleTraits v0.9.5 [90137ffa] + StaticArrays v1.9.16 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [d6f4376e] + Markdown v1.11.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [4536629a] + OpenBLAS_jll v0.3.29+0 [bea87d4a] + SuiteSparse_jll v7.8.3+2 [8e850b90] + libblastrampoline_jll v5.15.0+0 Installation completed after 6.09s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... 4630.5 ms ✓ TestEnv 1 dependency successfully precompiled in 5 seconds. 26 already precompiled. ┌ Warning: Could not use exact versions of packages in manifest, re-resolving └ @ TestEnv ~/.julia/packages/TestEnv/h9a3r/src/julia-1.12/activate_set.jl:78 ┌ Warning: tarball content does not match git-tree-sha1 └ @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:811 Precompiling package dependencies... Precompiling packages... 2200.6 ms ✓ Combinatorics 705.0 ms ✓ AlgebraicInterfaces 855.1 ms ✓ Compiler 788.6 ms ✓ LaTeXStrings 683.3 ms ✓ IteratorInterfaceExtensions 850.7 ms ✓ TensorCore 1040.3 ms ✓ WorkerUtilities 874.6 ms ✓ StatsAPI 875.9 ms ✓ Contour 3576.6 ms ✓ CEnum 2528.9 ms ✓ Format 918.5 ms ✓ Measures 1085.2 ms ✓ Statistics 36097.6 ms ✓ JuliaSyntax 866.7 ms ✓ PrettyPrint 859.8 ms ✓ ArgCheck 1136.9 ms ✓ IterTools 7331.3 ms ✓ MacroTools 4051.7 ms ✓ Grisu 4073.1 ms ✓ OrderedCollections 1123.1 ms ✓ Requires 782.8 ms ✓ DataValueInterfaces 907.0 ms ✓ StableRNGs 4010.1 ms ✓ Unzip 744.2 ms ✓ Reexport 1091.1 ms ✓ DocStringExtensions 1730.0 ms ✓ InlineStrings 1043.1 ms ✓ AbstractTrees 5147.6 ms ✓ IrrationalConstants 1215.8 ms ✓ URIs 778.7 ms ✓ SimpleBufferStream 837.1 ms ✓ PEG 781.4 ms ✓ PtrArrays 1293.9 ms ✓ TranscodingStreams 905.6 ms ✓ HashArrayMappedTries 3824.6 ms ✓ NaNMath 955.0 ms ✓ DelimitedFiles 843.0 ms ✓ InvertedIndices 31299.8 ms ✓ MLStyle 1029.7 ms ✓ Inflate 825.1 ms ✓ DataAPI 4796.4 ms ✓ Crayons 844.2 ms ✓ BitFlags 988.5 ms ✓ StaticArraysCore 2192.6 ms ✓ ConcurrentUtilities 1740.1 ms ✓ AMD 2084.7 ms ✓ SentinelArrays 4485.8 ms ✓ StructTypes 862.7 ms ✓ Scratch 1057.6 ms ✓ LoggingExtras 1115.9 ms ✓ Preferences 3893.3 ms ✓ Compat 1678.4 ms ✓ CodeTracking 3116.8 ms ✓ UnicodeFun 1621.3 ms ✓ ExceptionUnwrapping 1420.1 ms ✓ RandomV06 1458.8 ms ✓ Permutations 762.1 ms ✓ TableTraits 6595.8 ms ✓ FixedPointNumbers 1306.9 ms ✓ Statistics → SparseArraysExt 860.2 ms ✓ NameResolution 3158.4 ms ✓ SimpleTraits 838.5 ms ✓ Showoff 9437.7 ms ✓ FileIO 1396.3 ms ✓ LogExpFunctions 965.1 ms ✓ AliasTables 935.5 ms ✓ CodecZlib 886.6 ms ✓ ScopedValues 10901.9 ms ✓ CompTime 996.1 ms ✓ PooledArrays 3750.2 ms ✓ Missings 4505.5 ms ✓ OpenSSL 1123.8 ms ✓ RelocatableFolders 1138.7 ms ✓ JLLWrappers 1482.7 ms ✓ MPIPreferences 855.2 ms ✓ PrecompileTools 868.3 ms ✓ Compat → CompatLinearAlgebraExt 12022.4 ms ✓ JuliaInterpreter 4511.8 ms ✓ Tables 5171.0 ms ✓ ColorTypes 12111.2 ms ✓ JuliaVariables 1264.5 ms ✓ MatrixMarket 1499.3 ms ✓ boost_jll 1402.7 ms ✓ Graphite2_jll 1389.7 ms ✓ Libmount_jll 1088.2 ms ✓ EpollShim_jll 1415.2 ms ✓ LLVMOpenMP_jll 1391.2 ms ✓ Bzip2_jll 1433.0 ms ✓ Xorg_libpciaccess_jll 1404.0 ms ✓ METIS_jll 1407.5 ms ✓ Xorg_libICE_jll 1398.8 ms ✓ Xorg_libXau_jll 1434.4 ms ✓ libpng_jll 1414.8 ms ✓ libfdk_aac_jll 1417.5 ms ✓ LAME_jll 1463.3 ms ✓ PicoSAT_jll 1410.8 ms ✓ LERC_jll 1405.6 ms ✓ fzf_jll 1494.2 ms ✓ JpegTurbo_jll 1539.5 ms ✓ XZ_jll 1398.6 ms ✓ Ogg_jll 1412.8 ms ✓ mtdev_jll 1407.3 ms ✓ FlowCutterPACE17_jll 1413.3 ms ✓ Xorg_libXdmcp_jll 1432.2 ms ✓ x265_jll 1507.5 ms ✓ x264_jll 1474.4 ms ✓ Arpack_jll 1426.2 ms ✓ libaom_jll 1400.1 ms ✓ MbedTLS_jll 1431.7 ms ✓ Zstd_jll 1398.2 ms ✓ Expat_jll 1487.5 ms ✓ Lingeling_jll 1414.4 ms ✓ LZO_jll 1401.3 ms ✓ libpicosat_jll 1385.3 ms ✓ Opus_jll 1119.2 ms ✓ MicrosoftMPI_jll 1227.5 ms ✓ Xorg_xtrans_jll 1429.0 ms ✓ libevdev_jll 1448.4 ms ✓ Libiconv_jll 1412.6 ms ✓ Libffi_jll 1456.5 ms ✓ eudev_jll 1454.9 ms ✓ Libuuid_jll 1507.8 ms ✓ FriBidi_jll 4747.8 ms ✓ MPItrampoline_jll 18110.4 ms ✓ StaticArrays 2997.6 ms ✓ RecipesBase 3393.3 ms ✓ StringManipulation 21956.2 ms ✓ Parsers 55749.5 ms ✓ JLD2 3931.3 ms ✓ DataStructures 2389.7 ms ✓ FilePathsBase 6506.9 ms ✓ Aqua 863.7 ms ✓ StructEquality 21219.7 ms ✓ LoweredCodeUtils 6436.9 ms ✓ ColorVectorSpace 1188.0 ms ✓ ColorTypes → StyledStringsExt 9515.5 ms ✓ Colors 1370.0 ms ✓ KaHyPar_jll 1363.2 ms ✓ Pixman_jll 1362.6 ms ✓ FreeType2_jll 2305.3 ms ✓ Metis 1426.7 ms ✓ Xorg_libSM_jll 2049.5 ms ✓ JLFzf 1516.3 ms ✓ Ghostscript_jll 1404.9 ms ✓ libvorbis_jll 1512.3 ms ✓ Xorg_libxcb_jll 1388.5 ms ✓ Arpack 2076.5 ms ✓ MbedTLS 1423.5 ms ✓ Libtiff_jll 1392.5 ms ✓ Dbus_jll 1436.6 ms ✓ XML2_jll 1443.1 ms ✓ GettextRuntime_jll 1371.6 ms ✓ Wayland_jll 1343.5 ms ✓ libinput_jll 2408.7 ms ✓ BitBasis 7121.4 ms ✓ ArnoldiMethod 1342.5 ms ✓ StaticArrays → StaticArraysStatisticsExt 41643.0 ms ✓ Polynomials 34991.9 ms ✓ PrettyTables 18696.9 ms ✓ JSON3 3905.9 ms ✓ JSON 940.8 ms ✓ InlineStrings → ParsersExt 1663.2 ms ✓ SortingAlgorithms 15913.7 ms ✓ GeneralizedGenerated 1345.0 ms ✓ FilePathsBase → FilePathsBaseMmapExt 3260.7 ms ✓ FilePathsBase → FilePathsBaseTestExt 13227.4 ms ✓ Revise 8549.5 ms ✓ ColorSchemes 1610.8 ms ✓ KaHyPar 1533.0 ms ✓ Fontconfig_jll 9998.9 ms ✓ Latexify 1405.8 ms ✓ Xorg_xcb_util_jll 1592.0 ms ✓ Xorg_libX11_jll 32194.2 ms ✓ HTTP 989.3 ms ✓ LightXML 1379.9 ms ✓ Hwloc_jll 1736.3 ms ✓ Glib_jll 13121.3 ms ✓ Graphs 40107.0 ms ✓ ACSets 9246.3 ms ✓ Compose 77089.2 ms ✓ GATlab 2337.3 ms ✓ WeakRefStrings 8021.6 ms ✓ StatsBase 92247.7 ms ✓ DataFrames 3916.5 ms ✓ Revise → DistributedExt 116151.5 ms ✓ JET 20810.5 ms ✓ PlotUtils 2572.1 ms ✓ Latexify → SparseArraysExt 2084.5 ms ✓ Xorg_xcb_util_image_jll 2050.5 ms ✓ Xorg_xcb_util_keysyms_jll 2036.9 ms ✓ Xorg_xcb_util_renderutil_jll 1473.5 ms ✓ Xorg_xcb_util_wm_jll 1465.3 ms ✓ Xorg_libXrender_jll 1463.8 ms ✓ Xorg_libXext_jll 1467.9 ms ✓ Xorg_libXfixes_jll 1480.6 ms ✓ Xorg_libxkbfile_jll 6372.1 ms ✓ FileIO → HTTPExt 4750.5 ms ✓ OpenMPI_jll 5223.3 ms ✓ MPICH_jll 5524.3 ms ✓ CliqueTrees 3319.5 ms ✓ Metis → MetisGraphs 3972.9 ms ✓ TreeWidthSolver 108897.3 ms ✓ Catlab 33428.1 ms ✓ CSV 14598.1 ms ✓ SuiteSparseMatrixCollection 5748.6 ms ✓ Latexify → DataFramesExt 13202.9 ms ✓ ACSets → DataFramesACSetsExt 9739.2 ms ✓ PlotThemes 9671.7 ms ✓ RecipesPipeline 1374.7 ms ✓ Xorg_xcb_util_cursor_jll 1472.5 ms ✓ Xorg_libXinerama_jll 1384.4 ms ✓ Xorg_libXrandr_jll 1432.0 ms ✓ Libglvnd_jll 1493.1 ms ✓ Cairo_jll 1394.5 ms ✓ Xorg_libXcursor_jll 1442.4 ms ✓ Xorg_libXi_jll 1405.3 ms ✓ Xorg_xkbcomp_jll 5136.1 ms ✓ CryptoMiniSat_jll 3217.6 ms ✓ CliqueTrees → MetisExt 3230.4 ms ✓ CliqueTrees → AMDExt 3468.2 ms ✓ CliqueTrees → TreeWidthSolverExt 21077.8 ms ✓ Catlab → CatlabDataFramesExt 17822.4 ms ✓ Catlab → CatlabGraphsExt 18062.1 ms ✓ CliqueTrees → CatlabExt 1468.5 ms ✓ HarfBuzz_jll 1235.1 ms ✓ Xorg_xkeyboard_config_jll 1483.4 ms ✓ libass_jll 1475.3 ms ✓ Pango_jll 1437.0 ms ✓ xkbcommon_jll 1562.1 ms ✓ FFMPEG_jll 1444.8 ms ✓ Vulkan_Loader_jll 1531.0 ms ✓ libdecor_jll 1197.0 ms ✓ FFMPEG 1577.5 ms ✓ Qt6Base_jll 1528.8 ms ✓ GLFW_jll 1526.0 ms ✓ Qt6ShaderTools_jll 1647.9 ms ✓ GR_jll 1595.2 ms ✓ Qt6Declarative_jll 1580.2 ms ✓ Qt6Wayland_jll 7052.3 ms ✓ GR 119711.1 ms ✓ Plots 18215.3 ms ✓ Plots → FileIOExt 21193.0 ms ✓ Laplacians 19782.3 ms ✓ CliqueTrees → LaplaciansExt 244 dependencies successfully precompiled in 1620 seconds. 42 already precompiled. 2 dependencies had output during precompilation: ┌ Catlab │ WARNING: Constructor for type "FinCat" was extended in `FinSets` without explicit qualification or import. │ NOTE: Assumed "FinCat" refers to `FinCats.FinCat`. This behavior is deprecated and may differ in future versions.` │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function FinCat end`. │ Hint: To silence the warning, qualify `FinCat` as `FinCats.FinCat` in the method signature or explicitly `import FinCats: FinCat`. │ WARNING: Constructor for type "SetOb" was extended in `FinSets` without explicit qualification or import. │ NOTE: Assumed "SetOb" refers to `Sets.SetOb`. This behavior is deprecated and may differ in future versions.` │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function SetOb end`. │ Hint: To silence the warning, qualify `SetOb` as `Sets.SetOb` in the method signature or explicitly `import Sets: SetOb`. │ WARNING: Constructor for type "VarSet" was extended in `CSets` without explicit qualification or import. │ NOTE: Assumed "VarSet" refers to `FinSets.VarSet`. This behavior is deprecated and may differ in future versions.` │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function VarSet end`. │ Hint: To silence the warning, qualify `VarSet` as `FinSets.VarSet` in the method signature or explicitly `import FinSets: VarSet`. │ WARNING: Constructor for type "VarFunction" was extended in `CSets` without explicit qualification or import. │ NOTE: Assumed "VarFunction" refers to `FinSets.VarFunction`. This behavior is deprecated and may differ in future versions.` │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function VarFunction end`. │ Hint: To silence the warning, qualify `VarFunction` as `FinSets.VarFunction` in the method signature or explicitly `import FinSets: VarFunction`. │ WARNING: Constructor for type "ACSet" was extended in `CSets` without explicit qualification or import. │ NOTE: Assumed "ACSet" refers to `ACSets.ACSet`. This behavior is deprecated and may differ in future versions.` │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function ACSet end`. │ Hint: To silence the warning, qualify `ACSet` as `ACSets.ACSet` in the method signature or explicitly `import ACSets: ACSet`. └ ┌ Polynomials │ WARNING: Constructor for type "Symbol" was extended in `Polynomials` without explicit qualification or import. │ NOTE: Assumed "Symbol" refers to `Base.Symbol`. This behavior is deprecated and may differ in future versions.` │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Symbol end`. │ Hint: To silence the warning, qualify `Symbol` as `Base.Symbol` in the method signature or explicitly `import Base: Symbol`. └ Precompilation completed after 1677.39s ################################################################################ # Testing # Testing CliqueTrees Test Could not use exact versions of packages in manifest. Re-resolving dependencies Updating `/tmp/jl_XWxwZ8/Project.toml` [14f7f29c] + AMD v0.5.3 [4c88cf16] + Aqua v0.8.14 ⌃ [134e5e36] + Catlab v0.16.20 ⌃ [60701a23] + CliqueTrees v1.2.0 ⌃ [86223c79] ↓ Graphs v1.13.4 ⇒ v1.13.1 [c3a54625] + JET v0.11.3 [aa1ae85d] + JuliaInterpreter v0.10.9 [2a6221f6] + KaHyPar v0.3.1 [6f8e5838] + Laplacians v1.4.1 [4d4711f2] + MatrixMarket v0.5.2 [2679e427] + Metis v1.5.0 [ac199af8] + SuiteSparseMatrixCollection v0.5.7 [7d267fc5] + TreeWidthSolver v0.3.5 [cf02a7a8] + CryptoMiniSat_jll v6.0.0+0 [008204e2] + FlowCutterPACE17_jll v0.0.2+0 [54ea7443] + Lingeling_jll v1.0.0+1 [e78fa76d] + PicoSAT_jll v965.0.0+0 [6b231c3b] + libpicosat_jll v965.0.1+0 [8dfed614] ~ Test ⇒ v1.11.0 Updating `/tmp/jl_XWxwZ8/Manifest.toml` [227ef7b5] + ACSets v0.2.26 [14f7f29c] + AMD v0.5.3 [23cfdc9f] + AlgebraicInterfaces v0.1.4 [66dad0bd] + AliasTables v1.1.3 [4c88cf16] + Aqua v0.8.14 [dce04be8] + ArgCheck v2.5.0 [7d9fca2a] + Arpack v0.5.4 [50ba71b6] + BitBasis v0.9.10 [d1d4a3ce] + BitFlags v0.1.9 [fa961155] + CEnum v0.5.0 [336ed68f] + CSV v0.10.15 ⌃ [134e5e36] + Catlab v0.16.20 ⌃ [60701a23] + CliqueTrees v1.2.0 [da1fd8a2] + CodeTracking v3.0.0 [944b1d66] + CodecZlib v0.7.8 [35d6a980] + ColorSchemes v3.31.0 [3da002f7] + ColorTypes v0.12.1 [c3611d14] + ColorVectorSpace v0.11.0 [5ae59095] + Colors v0.13.1 [861a8166] + Combinatorics v1.1.0 [0fb5dd42] + CompTime v0.1.2 [34da2185] + Compat v4.18.1 [807dbc54] + Compiler v0.1.1 [a81c6b42] + Compose v0.9.6 [f0e56b4a] + ConcurrentUtilities v2.5.0 [d38c429a] + Contour v0.6.3 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.8.1 ⌅ [864edb3b] ↓ DataStructures v0.19.3 ⇒ v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [8bb1440f] + DelimitedFiles v1.9.1 [ffbed154] + DocStringExtensions v0.9.5 [460bff9d] + ExceptionUnwrapping v0.1.11 [c87230d0] + FFMPEG v0.4.5 [5789e2e9] + FileIO v1.17.1 [48062228] + FilePathsBase v0.9.24 [53c48c17] + FixedPointNumbers v0.8.5 [1fa38f19] + Format v1.3.7 ⌅ [f0ffcf3b] + GATlab v0.1.6 [28b8d3ca] + GR v0.73.22 [6b9d7cbe] + GeneralizedGenerated v0.3.3 ⌃ [86223c79] ↓ Graphs v1.13.4 ⇒ v1.13.1 [42e2da0e] + Grisu v1.0.2 [cd3eb016] + HTTP v1.10.19 [076d061b] + HashArrayMappedTries v0.2.0 [842dd82b] + InlineStrings v1.4.5 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.6 [c8e1da08] + IterTools v1.10.0 [82899510] + IteratorInterfaceExtensions v1.0.0 [c3a54625] + JET v0.11.3 ⌅ [033835bb] + JLD2 v0.5.15 [1019f520] + JLFzf v0.1.11 [692b3bcd] + JLLWrappers v1.7.1 ⌅ [682c06a0] + JSON v0.21.4 [0f8b85d8] + JSON3 v1.14.3 [aa1ae85d] + JuliaInterpreter v0.10.9 [70703baa] + JuliaSyntax v1.0.2 [b14d175d] + JuliaVariables v0.2.4 [2a6221f6] + KaHyPar v0.3.1 [b964fa9f] + LaTeXStrings v1.4.0 [6f8e5838] + Laplacians v1.4.1 [23fbe1c1] + Latexify v0.16.10 [9c8b4983] + LightXML v0.9.3 [2ab3a3ac] + LogExpFunctions v0.3.29 [e6f89c97] + LoggingExtras v1.2.0 [6f1432cf] + LoweredCodeUtils v3.5.0 [d8e11817] + MLStyle v0.4.17 [3da0fdf6] + MPIPreferences v0.1.11 [4d4711f2] + MatrixMarket v0.5.2 [739be429] + MbedTLS v1.1.9 [442fdcdd] + Measures v0.3.3 [2679e427] + Metis v1.5.0 [e1d29d7a] + Missings v1.2.0 [77ba4419] + NaNMath v1.1.3 [71a1bf82] + NameResolution v0.1.5 [4d8831e6] + OpenSSL v1.6.1 [12d937ae] + PEG v1.0.4 [69de0a69] + Parsers v2.8.3 [2ae35dd2] + Permutations v0.4.23 [ccf2f8ad] + PlotThemes v3.3.0 [995b91a9] + PlotUtils v1.4.4 [91a5bcdd] + Plots v1.41.4 ⌅ [f27b6e38] + Polynomials v3.2.13 [2dfb63ee] + PooledArrays v1.4.3 [8162dcfd] + PrettyPrint v0.2.0 ⌅ [08abe8d2] + PrettyTables v2.4.0 [43287f4e] + PtrArrays v1.3.0 [3639840a] + RandomV06 v0.0.2 [3cdcf5f2] + RecipesBase v1.3.4 [01d81517] + RecipesPipeline v0.6.12 [189a3867] + Reexport v1.2.2 [05181044] + RelocatableFolders v1.0.1 [ae029012] + Requires v1.3.1 [295af30f] + Revise v3.13.2 [7e506255] + ScopedValues v1.5.0 [6c6a2e73] + Scratch v1.3.0 [91c51154] + SentinelArrays v1.4.9 [992d4aef] + Showoff v1.0.3 [777ac1f9] + SimpleBufferStream v1.2.0 [a2af1166] + SortingAlgorithms v1.2.2 [860ef19b] + StableRNGs v1.0.4 [82ae8749] + StatsAPI v1.8.0 [2913bbd2] + StatsBase v0.34.10 [892a3eda] + StringManipulation v0.4.2 [6ec83bb0] + StructEquality v2.1.0 [856f2bd8] + StructTypes v1.11.0 [ac199af8] + SuiteSparseMatrixCollection v0.5.7 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [62fd8b95] + TensorCore v0.1.1 [3bb67fe8] + TranscodingStreams v0.11.3 [7d267fc5] + TreeWidthSolver v0.3.5 [5c2747f8] + URIs v1.6.1 [1cfade01] + UnicodeFun v0.4.1 [41fe7b60] + Unzip v0.2.0 [ea10d353] + WeakRefStrings v1.4.2 [76eceee3] + WorkerUtilities v1.6.1 ⌅ [68821587] + Arpack_jll v3.5.2+0 [6e34b625] + Bzip2_jll v1.0.9+0 [83423d85] + Cairo_jll v1.18.5+0 [cf02a7a8] + CryptoMiniSat_jll v6.0.0+0 [ee1fde0b] + Dbus_jll v1.16.2+0 [2702e6a9] + EpollShim_jll v0.0.20230411+1 [2e619515] + Expat_jll v2.7.3+0 [b22a6f82] + FFMPEG_jll v8.0.1+0 [008204e2] + FlowCutterPACE17_jll v0.0.2+0 [a3f928ae] + Fontconfig_jll v2.17.1+0 [d7e528f0] + FreeType2_jll v2.13.4+0 [559328eb] + FriBidi_jll v1.0.17+0 [0656b61e] + GLFW_jll v3.4.1+0 [d2c73de3] + GR_jll v0.73.22+0 [b0724c58] + GettextRuntime_jll v0.22.4+0 [61579ee1] + Ghostscript_jll v9.55.1+0 [7746bdde] + Glib_jll v2.86.2+0 [3b182d85] + Graphite2_jll v1.3.15+0 [2e76f6c2] + HarfBuzz_jll v8.5.1+0 [e33a78d0] + Hwloc_jll v2.12.2+0 [aacddb02] + JpegTurbo_jll v3.1.4+0 ⌅ [87a0c12d] + KaHyPar_jll v1.3.3+0 [c1c5ebd0] + LAME_jll v3.100.3+0 [88015f11] + LERC_jll v4.0.1+0 [1d63c593] + LLVMOpenMP_jll v18.1.8+0 [dd4b983a] + LZO_jll v2.10.3+0 ⌅ [e9f186c6] + Libffi_jll v3.4.7+0 [7e76a0d4] + Libglvnd_jll v1.7.1+1 [94ce4f54] + Libiconv_jll v1.18.0+0 [4b2f31a3] + Libmount_jll v2.41.2+0 [89763e89] + Libtiff_jll v4.7.2+0 [38a345b3] + Libuuid_jll v2.41.2+0 [54ea7443] + Lingeling_jll v1.0.0+1 [d00139f3] + METIS_jll v5.1.3+0 [7cb0a576] + MPICH_jll v4.3.2+0 [f1f71cc9] + MPItrampoline_jll v5.5.4+0 [c8ffd9c3] + MbedTLS_jll v2.28.1010+0 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 [e7412a2a] + Ogg_jll v1.3.6+0 [fe0851c0] + OpenMPI_jll v5.0.9+0 [91d4177d] + Opus_jll v1.6.0+0 [36c8627f] + Pango_jll v1.57.0+0 [e78fa76d] + PicoSAT_jll v965.0.0+0 ⌅ [30392449] + Pixman_jll v0.44.2+0 [c0090381] + Qt6Base_jll v6.8.2+2 [629bc702] + Qt6Declarative_jll v6.8.2+1 [ce943373] + Qt6ShaderTools_jll v6.8.2+1 [e99dba38] + Qt6Wayland_jll v6.8.2+2 [a44049a8] + Vulkan_Loader_jll v1.3.243+0 [a2964d1f] + Wayland_jll v1.24.0+0 ⌅ [02c8fc9c] + XML2_jll v2.13.9+0 [ffd25f8a] + XZ_jll v5.8.2+0 [f67eecfb] + Xorg_libICE_jll v1.1.2+0 [c834827a] + Xorg_libSM_jll v1.2.6+0 [4f6342f7] + Xorg_libX11_jll v1.8.12+0 [0c0b7dd1] + Xorg_libXau_jll v1.0.13+0 [935fb764] + Xorg_libXcursor_jll v1.2.4+0 [a3789734] + Xorg_libXdmcp_jll v1.1.6+0 [1082639a] + Xorg_libXext_jll v1.3.7+0 [d091e8ba] + Xorg_libXfixes_jll v6.0.2+0 [a51aa0fd] + Xorg_libXi_jll v1.8.3+0 [d1454406] + Xorg_libXinerama_jll v1.1.6+0 [ec84b674] + Xorg_libXrandr_jll v1.5.5+0 [ea2f1a96] + Xorg_libXrender_jll v0.9.12+0 [a65dc6b1] + Xorg_libpciaccess_jll v0.18.1+0 [c7cfdc94] + Xorg_libxcb_jll v1.17.1+0 [cc61e674] + Xorg_libxkbfile_jll v1.1.3+0 [e920d4aa] + Xorg_xcb_util_cursor_jll v0.1.6+0 [12413925] + Xorg_xcb_util_image_jll v0.4.1+0 [2def613f] + Xorg_xcb_util_jll v0.4.1+0 [975044d2] + Xorg_xcb_util_keysyms_jll v0.4.1+0 [0d47668e] + Xorg_xcb_util_renderutil_jll v0.3.10+0 [c22f9ab0] + Xorg_xcb_util_wm_jll v0.4.2+0 [35661453] + Xorg_xkbcomp_jll v1.4.7+0 [33bec58e] + Xorg_xkeyboard_config_jll v2.44.0+0 [c5fb5394] + Xorg_xtrans_jll v1.6.0+0 [3161d3a3] + Zstd_jll v1.5.7+1 ⌅ [28df3c45] + boost_jll v1.76.0+1 [35ca27e7] + eudev_jll v3.2.14+0 [214eeab7] + fzf_jll v0.61.1+0 [a4ae2306] + libaom_jll v3.13.1+0 [0ac62f75] + libass_jll v0.17.4+0 [1183f4f0] + libdecor_jll v0.2.2+0 [2db6ffa8] + libevdev_jll v1.13.4+0 [f638f0a6] + libfdk_aac_jll v2.0.4+0 [36db933b] + libinput_jll v1.28.1+0 [6b231c3b] + libpicosat_jll v965.0.1+0 [b53b4c65] + libpng_jll v1.6.54+0 [f27f6e37] + libvorbis_jll v1.3.8+0 [009596ad] + mtdev_jll v1.1.7+0 ⌅ [1270edf5] + x264_jll v10164.0.1+0 [dfaa095f] + x265_jll v4.1.0+0 [d8fb68d0] + xkbcommon_jll v1.13.0+0 [0dad84c5] + ArgTools v1.1.2 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [56ddb016] + Logging v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.12.1 [3fa0cd96] + REPL v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [4607b0f0] + SuiteSparse [a4e569a6] + Tar v1.10.0 [8dfed614] ~ Test ⇒ v1.11.0 [cf7118a7] + UUIDs v1.11.0 [781609d7] + GMP_jll v6.3.0+2 [deac9b47] + LibCURL_jll v8.15.0+0 [e37daf67] + LibGit2_jll v1.9.0+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.11.4 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [efcefdf7] + PCRE2_jll v10.44.0+1 [83775a58] + Zlib_jll v1.3.1+2 [8e850ede] + nghttp2_jll v1.64.0+1 [3f19e933] + p7zip_jll v17.7.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Test Successfully re-resolved Status `/tmp/jl_XWxwZ8/Project.toml` [14f7f29c] AMD v0.5.3 [1520ce14] AbstractTrees v0.4.5 [4c88cf16] Aqua v0.8.14 ⌃ [134e5e36] Catlab v0.16.20 ⌃ [60701a23] CliqueTrees v1.2.0 ⌃ [86223c79] Graphs v1.13.1 [c3a54625] JET v0.11.3 [aa1ae85d] JuliaInterpreter v0.10.9 [2a6221f6] KaHyPar v0.3.1 [6f8e5838] Laplacians v1.4.1 [4d4711f2] MatrixMarket v0.5.2 [2679e427] Metis v1.5.0 [ac199af8] SuiteSparseMatrixCollection v0.5.7 [7d267fc5] TreeWidthSolver v0.3.5 [cf02a7a8] CryptoMiniSat_jll v6.0.0+0 [008204e2] FlowCutterPACE17_jll v0.0.2+0 [54ea7443] Lingeling_jll v1.0.0+1 [e78fa76d] PicoSAT_jll v965.0.0+0 [6b231c3b] libpicosat_jll v965.0.1+0 [37e2e46d] LinearAlgebra v1.12.0 [2f01184e] SparseArrays v1.12.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_XWxwZ8/Manifest.toml` [227ef7b5] ACSets v0.2.26 [14f7f29c] AMD v0.5.3 [1520ce14] AbstractTrees v0.4.5 [23cfdc9f] AlgebraicInterfaces v0.1.4 [66dad0bd] AliasTables v1.1.3 [4c88cf16] Aqua v0.8.14 [dce04be8] ArgCheck v2.5.0 [ec485272] ArnoldiMethod v0.4.0 [7d9fca2a] Arpack v0.5.4 [50ba71b6] BitBasis v0.9.10 [d1d4a3ce] BitFlags v0.1.9 [fa961155] CEnum v0.5.0 [336ed68f] CSV v0.10.15 ⌃ [134e5e36] Catlab v0.16.20 ⌃ [60701a23] CliqueTrees v1.2.0 [da1fd8a2] CodeTracking v3.0.0 [944b1d66] CodecZlib v0.7.8 [35d6a980] ColorSchemes v3.31.0 [3da002f7] ColorTypes v0.12.1 [c3611d14] ColorVectorSpace v0.11.0 [5ae59095] Colors v0.13.1 [861a8166] Combinatorics v1.1.0 [0fb5dd42] CompTime v0.1.2 [34da2185] Compat v4.18.1 [807dbc54] Compiler v0.1.1 [a81c6b42] Compose v0.9.6 [f0e56b4a] ConcurrentUtilities v2.5.0 [d38c429a] Contour v0.6.3 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.8.1 ⌅ [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [8bb1440f] DelimitedFiles v1.9.1 [ffbed154] DocStringExtensions v0.9.5 [460bff9d] ExceptionUnwrapping v0.1.11 [c87230d0] FFMPEG v0.4.5 [5789e2e9] FileIO v1.17.1 [48062228] FilePathsBase v0.9.24 [53c48c17] FixedPointNumbers v0.8.5 [1fa38f19] Format v1.3.7 ⌅ [f0ffcf3b] GATlab v0.1.6 [28b8d3ca] GR v0.73.22 [6b9d7cbe] GeneralizedGenerated v0.3.3 ⌃ [86223c79] Graphs v1.13.1 [42e2da0e] Grisu v1.0.2 [cd3eb016] HTTP v1.10.19 [076d061b] HashArrayMappedTries v0.2.0 [d25df0c9] Inflate v0.1.5 [842dd82b] InlineStrings v1.4.5 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.6 [c8e1da08] IterTools v1.10.0 [82899510] IteratorInterfaceExtensions v1.0.0 [c3a54625] JET v0.11.3 ⌅ [033835bb] JLD2 v0.5.15 [1019f520] JLFzf v0.1.11 [692b3bcd] JLLWrappers v1.7.1 ⌅ [682c06a0] JSON v0.21.4 [0f8b85d8] JSON3 v1.14.3 [aa1ae85d] JuliaInterpreter v0.10.9 [70703baa] JuliaSyntax v1.0.2 [b14d175d] JuliaVariables v0.2.4 [2a6221f6] KaHyPar v0.3.1 [b964fa9f] LaTeXStrings v1.4.0 [6f8e5838] Laplacians v1.4.1 [23fbe1c1] Latexify v0.16.10 [9c8b4983] LightXML v0.9.3 [2ab3a3ac] LogExpFunctions v0.3.29 [e6f89c97] LoggingExtras v1.2.0 [6f1432cf] LoweredCodeUtils v3.5.0 [d8e11817] MLStyle v0.4.17 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[9237b28f] MicrosoftMPI_jll v10.1.4+3 [e7412a2a] Ogg_jll v1.3.6+0 [fe0851c0] OpenMPI_jll v5.0.9+0 [91d4177d] Opus_jll v1.6.0+0 [36c8627f] Pango_jll v1.57.0+0 [e78fa76d] PicoSAT_jll v965.0.0+0 ⌅ [30392449] Pixman_jll v0.44.2+0 [c0090381] Qt6Base_jll v6.8.2+2 [629bc702] Qt6Declarative_jll v6.8.2+1 [ce943373] Qt6ShaderTools_jll v6.8.2+1 [e99dba38] Qt6Wayland_jll v6.8.2+2 [a44049a8] Vulkan_Loader_jll v1.3.243+0 [a2964d1f] Wayland_jll v1.24.0+0 ⌅ [02c8fc9c] XML2_jll v2.13.9+0 [ffd25f8a] XZ_jll v5.8.2+0 [f67eecfb] Xorg_libICE_jll v1.1.2+0 [c834827a] Xorg_libSM_jll v1.2.6+0 [4f6342f7] Xorg_libX11_jll v1.8.12+0 [0c0b7dd1] Xorg_libXau_jll v1.0.13+0 [935fb764] Xorg_libXcursor_jll v1.2.4+0 [a3789734] Xorg_libXdmcp_jll v1.1.6+0 [1082639a] Xorg_libXext_jll v1.3.7+0 [d091e8ba] Xorg_libXfixes_jll v6.0.2+0 [a51aa0fd] Xorg_libXi_jll v1.8.3+0 [d1454406] Xorg_libXinerama_jll v1.1.6+0 [ec84b674] Xorg_libXrandr_jll v1.5.5+0 [ea2f1a96] Xorg_libXrender_jll v0.9.12+0 [a65dc6b1] Xorg_libpciaccess_jll v0.18.1+0 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xkbcommon_jll v1.13.0+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.12.1 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [1a1011a3] SharedArrays v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.12.0 [f489334b] StyledStrings v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [781609d7] GMP_jll v6.3.0+2 [deac9b47] LibCURL_jll v8.15.0+0 [e37daf67] LibGit2_jll v1.9.0+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.11.4 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.7+0 [458c3c95] OpenSSL_jll v3.5.4+0 [efcefdf7] PCRE2_jll v10.44.0+1 [bea87d4a] SuiteSparse_jll v7.8.3+2 [83775a58] Zlib_jll v1.3.1+2 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.64.0+1 [3f19e933] p7zip_jll v17.7.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... Test Summary: | Pass Total Time Code Quality (Aqua.jl) | 11 11 1m02.7s Test Summary: | Total Time Code Quality (JET.jl) | 0 7.2s WARNING: Imported binding CliqueTrees.Parent was undeclared at import time during import to Main. WARNING: Imported binding CliqueTrees.cliquetree! was undeclared at import time during import to Main. Core: Error During Test at /home/pkgeval/.julia/packages/CliqueTrees/Tzv8B/test/runtests.jl:11 Got exception outside of a @test LoadError: UndefVarError: `KaHyParND` not defined in `Main` Suggestion: check for spelling errors or missing imports. Stacktrace: [1] top-level scope @ ~/.julia/packages/CliqueTrees/Tzv8B/test/core.jl:44 [2] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:307 [3] top-level scope @ ~/.julia/packages/CliqueTrees/Tzv8B/test/runtests.jl:12 [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.12/Test/src/Test.jl:1776 [inlined] [5] macro expansion @ ~/.julia/packages/CliqueTrees/Tzv8B/test/runtests.jl:12 [inlined] [6] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:307 [7] top-level scope @ none:6 [8] eval(m::Module, e::Any) @ Core ./boot.jl:489 [9] exec_options(opts::Base.JLOptions) @ Base ./client.jl:283 [10] _start() @ Base ./client.jl:550 in expression starting at /home/pkgeval/.julia/packages/CliqueTrees/Tzv8B/test/core.jl:35 Test Summary: | Pass Error Total Time Core | 5 1 6 1m43.1s errors | 5 5 0.5s RNG of the outermost testset: Random.Xoshiro(0x063891a52f13692d, 0x8b42f9af89172f04, 0xb0c3544b47a06fe3, 0x72632fd1bb27b7fe, 0x3c8872e84e912d9a) ERROR: LoadError: Some tests did not pass: 5 passed, 0 failed, 1 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/CliqueTrees/Tzv8B/test/runtests.jl:11 Testing failed after 234.57s ERROR: LoadError: Package CliqueTrees errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2535 [3] test @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2384 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:538 [5] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:169 [6] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:157 [7] test @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:157 [inlined] [8] #test#81 @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:156 [inlined] [9] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:223 [10] include(mod::Module, _path::String) @ Base ./Base.jl:306 [11] exec_options(opts::Base.JLOptions) @ Base ./client.jl:317 [12] _start() @ Base ./client.jl:550 in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 PkgEval failed after 1968.81s: package tests unexpectedly errored