Package evaluation to test BetaML on Julia 1.12.4 (422f456051*) started at 2026-01-29T12:29:57.662 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.12` Set-up completed after 7.97s ################################################################################ # Installation # Installing BetaML... Resolving package versions... Installed BetaML ─ v0.12.6 Updating `~/.julia/environments/v1.12/Project.toml` [024491cd] + BetaML v0.12.6 Updating `~/.julia/environments/v1.12/Manifest.toml` [621f4979] + AbstractFFTs v1.5.0 [1520ce14] + AbstractTrees v0.4.5 [79e6a3ab] + Adapt v4.4.0 [66dad0bd] + AliasTables v1.1.3 [4fba245c] + ArrayInterface v7.22.0 [024491cd] + BetaML v0.12.6 [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 [2a0fbf3d] + CPUSummary v0.2.7 [324d7699] + CategoricalArrays v1.0.2 [082447d4] + ChainRules v1.72.6 [d360d2e6] + ChainRulesCore v1.26.0 [0b6fb165] + ChunkCodecCore v1.0.1 [4c0bbee4] + ChunkCodecLibZlib v1.0.0 [55437552] + ChunkCodecLibZstd v1.0.0 [fb6a15b2] + CloseOpenIntervals v0.1.13 [861a8166] + Combinatorics v1.1.0 [bbf7d656] + CommonSubexpressions v0.3.1 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.18.1 [187b0558] + ConstructionBase v1.6.0 [adafc99b] + CpuId v0.3.1 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.19.3 [e2d170a0] + DataValueInterfaces v1.0.0 [8bb1440f] + DelimitedFiles v1.9.1 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [31c24e10] + Distributions v0.25.123 [ffbed154] + DocStringExtensions v0.9.5 [5789e2e9] + FileIO v1.17.1 [1a297f60] + FillArrays v1.16.0 [9dda63f9] + ForceImport v0.0.3 [f6369f11] + ForwardDiff v1.3.1 [46192b85] + GPUArraysCore v0.2.0 [076d061b] + HashArrayMappedTries v0.2.0 [3e5b6fbb] + HostCPUFeatures v0.1.18 [34004b35] + HypergeometricFunctions v0.3.28 [7869d1d1] + IRTools v0.4.15 [615f187c] + IfElse v0.1.1 [92d709cd] + IrrationalConstants v0.2.6 [82899510] + IteratorInterfaceExtensions v1.0.0 [033835bb] + JLD2 v0.6.3 [692b3bcd] + JLLWrappers v1.7.1 [10f19ff3] + LayoutPointers v0.1.17 [2ab3a3ac] + LogExpFunctions v0.3.29 [bdcacae8] + LoopVectorization v0.12.173 [e80e1ace] + MLJModelInterface v1.12.1 [1914dd2f] + MacroTools v0.5.16 [d125e4d3] + ManualMemory v0.1.8 [e1d29d7a] + Missings v1.2.0 [77ba4419] + NaNMath v1.1.3 [6fe1bfb0] + OffsetArrays v1.17.0 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.37 [1d0040c9] + PolyesterWeave v0.2.2 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.1 [92933f4c] + ProgressMeter v1.11.0 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [c1ae055f] + RealDot v0.1.0 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.9.0 [94e857df] + SIMDTypes v0.1.0 [476501e8] + SLEEFPirates v0.6.43 [431bcebd] + SciMLPublic v1.0.1 [30f210dd] + ScientificTypesBase v3.0.0 [7e506255] + ScopedValues v1.5.0 [a2af1166] + SortingAlgorithms v1.2.2 [dc90abb0] + SparseInverseSubset v0.1.2 [276daf66] + SpecialFunctions v2.6.1 [860ef19b] + StableRNGs v1.0.4 [aedffcd0] + Static v1.3.1 [0d7ed370] + StaticArrayInterface v1.8.0 [90137ffa] + StaticArrays v1.9.16 [1e83bf80] + StaticArraysCore v1.4.4 [64bff920] + StatisticalTraits v3.5.0 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 [2913bbd2] + StatsBase v0.34.10 [4c63d2b9] + StatsFuns v1.5.2 [09ab397b] + StructArrays v0.7.2 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [8290d209] + ThreadingUtilities v0.5.5 [3a884ed6] + UnPack v1.0.2 [3d5dd08c] + VectorizationBase v0.21.72 [e88e6eb3] + Zygote v0.7.10 [700de1a5] + ZygoteRules v0.2.7 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [3161d3a3] + Zstd_jll v1.5.7+1 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.12.1 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.15.0+0 [e37daf67] + LibGit2_jll v1.9.0+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.11.4 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [bea87d4a] + SuiteSparse_jll v7.8.3+2 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.64.0+1 [3f19e933] + p7zip_jll v17.7.0+0 Building BetaML → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/63ef34d620fca7dc7e49ed2b6f64ea1c872757b6/build.log` Installation completed after 12.07s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompiling packages... 6839.6 ms ✓ Zygote → ZygoteColorsExt 13846.7 ms ✓ ScientificTypes 32717.0 ms ✓ MLDatasets 142052.3 ms ✓ Plots 14547.5 ms ✓ CategoricalDistributions 16533.2 ms ✓ MLJTransforms 20029.3 ms ✓ Plots → GeometryBasicsExt 20707.7 ms ✓ Plots → FileIOExt 109750.5 ms ✓ StatisticalMeasures 22971.8 ms ✓ MLJModels 21769.1 ms ✓ MLJBase 14415.1 ms ✓ MLJEnsembles 13288.3 ms ✓ StatisticalMeasures → ScientificTypesExt 17002.9 ms ✓ MLJBalancing 16705.3 ms ✓ MLJTestInterface 10559.7 ms ✓ MLJBase → DefaultMeasuresExt 19308.7 ms ✓ MLJIteration 33750.6 ms ✓ MLJFlow 22525.1 ms ✓ MLJTuning 49717.4 ms ✓ MLJ 81186.4 ms ✓ MLJTestIntegration 21 dependencies successfully precompiled in 719 seconds. 401 already precompiled. Precompilation completed after 782.94s ################################################################################ # Testing # Testing BetaML Status `/tmp/jl_qnMatG/Project.toml` [1520ce14] AbstractTrees v0.4.5 [024491cd] BetaML v0.12.6 [324d7699] CategoricalArrays v1.0.2 [861a8166] Combinatorics v1.1.0 [7806a523] DecisionTree v0.12.4 [8bb1440f] DelimitedFiles v1.9.1 [31c24e10] Distributions v0.25.123 [ffbed154] DocStringExtensions v0.9.5 ⌃ [eb30cadb] MLDatasets v0.5.13 [a7f614a8] MLJBase v1.12.1 [697918b4] MLJTestIntegration v0.5.4 [72560011] MLJTestInterface v0.2.9 [90014a1f] PDMats v0.11.37 [b98c9c47] Pipe v1.3.0 [91a5bcdd] Plots v1.41.4 [92933f4c] ProgressMeter v1.11.0 [189a3867] Reexport v1.2.2 [860ef19b] StableRNGs v1.0.4 [a19d573c] StatisticalMeasures v0.3.4 [10745b16] Statistics v1.11.1 [1fa7448c] TreeRecipe v0.2.0 [e88e6eb3] Zygote v0.7.10 [ade2ca70] Dates v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_qnMatG/Manifest.toml` [da404889] ARFFFiles v1.6.0 [621f4979] AbstractFFTs v1.5.0 [1520ce14] AbstractTrees v0.4.5 [7d9f7c33] Accessors v0.1.43 [79e6a3ab] Adapt v4.4.0 [66dad0bd] AliasTables v1.1.3 [dce04be8] ArgCheck v2.5.0 [ec485272] ArnoldiMethod v0.4.0 [4fba245c] ArrayInterface v7.22.0 [a9b6321e] Atomix v1.1.2 [198e06fe] BangBang v0.4.7 [9718e550] Baselet v0.1.1 [024491cd] BetaML v0.12.6 [9e28174c] BinDeps v1.0.2 [50ba71b6] BitBasis v0.9.10 [d1d4a3ce] BitFlags v0.1.9 [62783981] BitTwiddlingConvenienceFunctions v0.1.6 [e1450e63] BufferedStreams v1.2.2 [2a0fbf3d] CPUSummary v0.2.7 [324d7699] CategoricalArrays v1.0.2 [af321ab8] CategoricalDistributions v0.2.1 [082447d4] ChainRules v1.72.6 [d360d2e6] ChainRulesCore v1.26.0 [0b6fb165] ChunkCodecCore v1.0.1 [4c0bbee4] ChunkCodecLibZlib v1.0.0 [55437552] ChunkCodecLibZstd v1.0.0 [fb6a15b2] CloseOpenIntervals v0.1.13 [944b1d66] CodecZlib v0.7.8 [35d6a980] ColorSchemes v3.31.0 ⌅ [3da002f7] ColorTypes v0.11.5 ⌃ [c3611d14] ColorVectorSpace v0.10.0 [5ae59095] Colors v0.13.1 [861a8166] Combinatorics v1.1.0 [bbf7d656] CommonSubexpressions v0.3.1 [f70d9fcc] CommonWorldInvalidations v1.0.0 [34da2185] Compat v4.18.1 [a33af91c] CompositionsBase v0.1.2 [ed09eef8] ComputationalResources v0.3.2 [f0e56b4a] ConcurrentUtilities v2.5.0 [8f4d0f93] Conda v1.10.3 [187b0558] ConstructionBase v1.6.0 [6add18c4] ContextVariablesX v0.1.3 [d38c429a] Contour v0.6.3 [adafc99b] CpuId v0.3.1 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [124859b0] DataDeps v0.7.13 [864edb3b] DataStructures v0.19.3 [e2d170a0] DataValueInterfaces v1.0.0 [7806a523] DecisionTree v0.12.4 [244e2a9f] DefineSingletons v0.1.2 [8bb1440f] DelimitedFiles v1.9.1 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [b4f34e82] Distances v0.10.12 [31c24e10] Distributions v0.25.123 [ffbed154] DocStringExtensions v0.9.5 [792122b4] EarlyStopping v0.3.0 [460bff9d] ExceptionUnwrapping v0.1.11 [411431e0] Extents v0.1.6 [c87230d0] FFMPEG v0.4.5 [cc61a311] FLoops v0.2.2 [b9860ae5] FLoopsBase v0.1.1 [33837fe5] FeatureSelection v0.2.4 [5789e2e9] FileIO v1.17.1 [48062228] FilePathsBase v0.9.24 [1a297f60] FillArrays v1.16.0 [53c48c17] FixedPointNumbers v0.8.5 [9dda63f9] ForceImport v0.0.3 [1fa38f19] Format v1.3.7 [f6369f11] ForwardDiff v1.3.1 [46192b85] GPUArraysCore v0.2.0 [28b8d3ca] GR v0.73.22 ⌅ [92fee26a] GZip v0.5.2 [5c1252a2] GeometryBasics v0.5.10 [86223c79] Graphs v1.13.4 [42e2da0e] Grisu v1.0.2 [f67ccb44] HDF5 v0.17.2 [cd3eb016] HTTP v1.10.19 [076d061b] HashArrayMappedTries v0.2.0 [3e5b6fbb] HostCPUFeatures v0.1.18 [34004b35] HypergeometricFunctions v0.3.28 [7869d1d1] IRTools v0.4.15 [615f187c] IfElse v0.1.1 [d25df0c9] Inflate v0.1.5 [22cec73e] InitialValues v0.3.1 [3587e190] InverseFunctions v0.1.17 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.6 [c8e1da08] IterTools v1.10.0 [b3c1a2ee] IterationControl v0.5.4 [82899510] IteratorInterfaceExtensions v1.0.0 [033835bb] JLD2 v0.6.3 [1019f520] JLFzf v0.1.11 [692b3bcd] JLLWrappers v1.7.1 ⌅ [682c06a0] JSON v0.21.4 [0f8b85d8] JSON3 v1.14.3 [b14d175d] JuliaVariables v0.2.4 [63c18a36] KernelAbstractions v0.9.39 [b964fa9f] LaTeXStrings v1.4.0 [23fbe1c1] Latexify v0.16.10 [a5e1c1ea] LatinHypercubeSampling v1.9.0 [10f19ff3] LayoutPointers v0.1.17 [92ad9a40] LearnAPI v2.0.1 [2ab3a3ac] LogExpFunctions v0.3.29 [e6f89c97] LoggingExtras v1.2.0 [bdcacae8] LoopVectorization v0.12.173 ⌅ [23992714] MAT v0.10.7 [c2834f40] MLCore v1.0.0 ⌃ [eb30cadb] MLDatasets v0.5.13 ⌅ [64a0f543] MLFlowClient v0.5.1 [add582a8] MLJ v0.22.0 [45f359ea] MLJBalancing v0.1.5 [a7f614a8] MLJBase v1.12.1 [50ed68f4] MLJEnsembles v0.4.4 [7b7b8358] MLJFlow v0.5.0 [614be32b] MLJIteration v0.6.4 [e80e1ace] MLJModelInterface v1.12.1 [d491faf4] MLJModels v0.18.3 [697918b4] MLJTestIntegration v0.5.4 [72560011] MLJTestInterface v0.2.9 [23777cdb] MLJTransforms v0.1.4 [03970b2e] MLJTuning v0.8.9 [d8e11817] MLStyle v0.4.17 [f1d291b0] MLUtils v0.4.8 [3da0fdf6] MPIPreferences v0.1.11 [1914dd2f] MacroTools v0.5.16 [d125e4d3] ManualMemory v0.1.8 [739be429] MbedTLS v1.1.9 [442fdcdd] Measures v0.3.3 [128add7d] MicroCollections v0.2.0 [e1d29d7a] Missings v1.2.0 [872c559c] NNlib v0.9.33 [77ba4419] NaNMath v1.1.3 [71a1bf82] NameResolution v0.1.5 [636a865e] NearestNeighborModels v0.2.3 [b8a86587] NearestNeighbors v0.4.26 [46757867] NetworkLayout v0.4.10 [6fe1bfb0] OffsetArrays v1.17.0 [8b6db2d4] OpenML v0.3.3 [4d8831e6] OpenSSL v1.6.1 [bac558e1] OrderedCollections v1.8.1 [90014a1f] PDMats v0.11.37 [d96e819e] Parameters v0.12.3 [69de0a69] Parsers v2.8.3 [b98c9c47] Pipe v1.3.0 [ccf2f8ad] PlotThemes v3.3.0 [995b91a9] PlotUtils v1.4.4 [91a5bcdd] Plots v1.41.4 [1d0040c9] PolyesterWeave v0.2.2 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.1 [8162dcfd] PrettyPrint v0.2.0 [54e16d92] PrettyPrinting v0.4.2 [08abe8d2] PrettyTables v3.1.2 [92933f4c] ProgressMeter v1.11.0 [43287f4e] PtrArrays v1.3.0 [438e738f] PyCall v1.96.4 [1fd47b50] QuadGK v2.11.2 [c1ae055f] RealDot v0.1.0 [3cdcf5f2] RecipesBase v1.3.4 [01d81517] RecipesPipeline v0.6.12 [189a3867] Reexport v1.2.2 [05181044] RelocatableFolders v1.0.1 [ae029012] Requires v1.3.1 [79098fc4] Rmath v0.9.0 [94e857df] SIMDTypes v0.1.0 [476501e8] SLEEFPirates v0.6.43 [431bcebd] SciMLPublic v1.0.1 [321657f4] ScientificTypes v3.1.2 [30f210dd] ScientificTypesBase v3.0.0 [6e75b9c4] ScikitLearnBase v0.5.0 [7e506255] ScopedValues v1.5.0 [6c6a2e73] Scratch v1.3.0 [91c51154] SentinelArrays v1.4.9 [efcf1570] Setfield v1.1.2 [605ecd9f] ShowCases v0.1.0 [992d4aef] Showoff v1.0.3 [777ac1f9] SimpleBufferStream v1.2.0 [699a6c99] SimpleTraits v0.9.5 [a2af1166] SortingAlgorithms v1.2.2 [dc90abb0] SparseInverseSubset v0.1.2 [276daf66] SpecialFunctions v2.6.1 [171d559e] SplittablesBase v0.1.15 [860ef19b] StableRNGs v1.0.4 [aedffcd0] Static v1.3.1 [0d7ed370] StaticArrayInterface v1.8.0 [90137ffa] StaticArrays v1.9.16 [1e83bf80] StaticArraysCore v1.4.4 [a19d573c] StatisticalMeasures v0.3.4 [c062fc1d] StatisticalMeasuresBase v0.1.3 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v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.12.1 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.12.0 [f489334b] StyledStrings v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.15.0+0 [e37daf67] LibGit2_jll v1.9.0+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.11.4 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.7+0 [458c3c95] OpenSSL_jll v3.5.4+0 [efcefdf7] PCRE2_jll v10.44.0+1 [bea87d4a] SuiteSparse_jll v7.8.3+2 [83775a58] Zlib_jll v1.3.1+2 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.64.0+1 [3f19e933] p7zip_jll v17.7.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... Precompiling packages... 9208.6 ms ✓ Distributions → DistributionsTestExt 1 dependency successfully precompiled in 13 seconds. 48 already precompiled. Running normal testing *** Testing individual utility functions (module `Utils`)... ** Going through Test2 (softmax and other activation functions)... ** Going through Test3 (autojacobian)... ** Testing cross-entropy... ** Testing permutations... ** Going through testing accuracy... ** Going through testing scaling... ** Testing batch()... ** Testing relative_mean_error()... Test Summary: | Pass Total Time mase (Mean Absolute Scaled Error) test | 2 2 23.1s ** Testing pca()... ** Testing AutoEncoder... *** *** Training for 400 epochs with algorithm ADAM. Training.. avg loss on epoch 1 (1): 59.232326082599755 Training.. avg loss on epoch 40 (40): 44.50049882301843 Training.. avg loss on epoch 80 (80): 7.520320043940394 Training.. avg loss on epoch 120 (120): 0.4022105678128309 Training.. avg loss on epoch 160 (160): 0.26753687657957126 Training.. avg loss on epoch 200 (200): 0.22593371791757116 Training the Neural Network... 51%|██████████▊ | ETA: 0:00:01Training.. avg loss on epoch 240 (240): 0.18486866536678356 Training.. avg loss on epoch 280 (280): 0.1485542303494302 Training.. avg loss on epoch 320 (320): 0.11618280921716444 Training.. avg loss on epoch 360 (360): 0.0868958730087477 Training.. avg loss on epoch 400 (400): 0.06289132845069043 Training the Neural Network... 100%|█████████████████████| Time: 0:00:02 Training of 400 epoch completed. Final epoch error: 0.06289132845069043. ** Testing accuracy() on probs given in a dictionary... ** Testing mode(dicts)... ** Testing ConfusionMatrix()... ** Testing class_counts()... ** Testing gini()... ** Testing entropy()... ** Testing mean_dicts()... ** Testing partition()... ** Testing KFold sampler with a single X matrix... ** Testing KFold sampler with multiple matrices... ** Testing cross_validation... Done iteration 1. This iteration output: [0.2743589743589744, 0.37435897435897436] Done iteration 2. This iteration output: [0.3547619047619048, 0.4547619047619048] Done iteration 3. This iteration output: [0.3303030303030303, 0.4303030303030303] ** Testing autotuning... ** Testing consistent_shuffle()... ** Testing generate_parallel_rngs()... ** Testing pool1d()... ** Testing get_parametric_types() (this uses Julia internals!)... Testing pairwise and silhouette... ** Testing xavier_init.... ** Testing cosine distance.... ** Testing Sobol Index.... [0.07381670969829102, 0.07381670969829102, 0.07240524462281735, 0.3078251482373956, 0.06937333494508434, 0.03718614747574485, 0.06497757813377811] ** Testing Feature Importance.... Testing MLJ interface for Utils.... Precompiling packages... 5173.3 ms ✓ BangBang → BangBangTablesExt 3855.3 ms ✓ MLCore 48087.6 ms ✓ PrettyTables 4086.4 ms ✓ CategoricalArrays → CategoricalArraysRecipesBaseExt 12449.2 ms ✓ KernelAbstractions 11576.9 ms ✓ Transducers 11536.1 ms ✓ ScientificTypes 3203.1 ms ✓ KernelAbstractions → SparseArraysExt 2664.5 ms ✓ KernelAbstractions → LinearAlgebraExt 2777.6 ms ✓ Transducers → TransducersAdaptExt 16955.0 ms ✓ FLoops 15249.7 ms ✓ CategoricalDistributions 15792.5 ms ✓ NNlib 3905.5 ms ✓ NNlib → NNlibSpecialFunctionsExt 26003.4 ms ✓ MLUtils 23114.6 ms ✓ StatisticalMeasuresBase 23213.8 ms ✓ MLJBase 17 dependencies successfully precompiled in 234 seconds. 132 already precompiled. Precompiling packages... 1286.1 ms ✓ BangBang → BangBangStructArraysExt 1 dependency successfully precompiled in 2 seconds. 24 already precompiled. Precompiling packages... 2747.3 ms ✓ StructArrays → StructArraysGPUArraysCoreExt 1 dependency successfully precompiled in 3 seconds. 36 already precompiled. Precompiling packages... 3375.8 ms ✓ NNlib → NNlibForwardDiffExt 1 dependency successfully precompiled in 4 seconds. 50 already precompiled. Precompiling packages... Info Given ForwardDiffNNlibExt was explicitly requested, output will be shown live  WARNING: method definition for relu at /home/pkgeval/.julia/packages/LoopVectorization/GKxH5/ext/ForwardDiffNNlibExt.jl:5 declares type variable S but does not use it. WARNING: method definition for leakyrelu at /home/pkgeval/.julia/packages/LoopVectorization/GKxH5/ext/ForwardDiffNNlibExt.jl:22 declares type variable S but does not use it. 5351.3 ms ✓ LoopVectorization → ForwardDiffNNlibExt 1 dependency successfully precompiled in 7 seconds. 80 already precompiled. 1 dependency had output during precompilation: ┌ LoopVectorization → ForwardDiffNNlibExt │ [Output was shown above] └ [ Info: Training machine(AutoEncoder(encoded_size = 2, …), …). *** *** Training for 200 epochs with algorithm ADAM. Training.. avg loss on epoch 1 (1): 24.0422719488856 Training of 200 epoch completed. Final epoch error: 29.22417704566309. Precompiling packages... 22189.6 ms ✓ MLJTestInterface 1 dependency successfully precompiled in 26 seconds. 165 already precompiled. Test Summary: | Pass Total Time generic mlj interface test | 1 1 1m17.7s Precompiling packages... 52350.3 ms ✓ StatisticalMeasures 13500.6 ms ✓ StatisticalMeasures → ScientificTypesExt 2 dependencies successfully precompiled in 72 seconds. 140 already precompiled. Precompiling packages... 13240.4 ms ✓ MLJBase → DefaultMeasuresExt 1 dependency successfully precompiled in 17 seconds. 151 already precompiled. *** Testing Decision trees/Random Forest algorithms... Testing basic classification of decision trees... Node printing: 2 >= 3.0? dim2 >= 18.0? ├─ -18.98 │ └─ 3.4 dim1 >= 0.7? ├─ "c" => 0.3333 │ "a" => 0.6667 │ └─ "b" => 1.0 Testing classification of the sepal database using decision trees... Testing decision trees regression... Testing classification of the sepal database using random forests... Testing random forest regression... ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 501 running 1 of 1 signal (10): User defined signal 1 jl_to_typeof at /source/src/julia.h:983 [inlined] verify_type at /source/src/gf.c:3982 [inlined] _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_invoke at /source/src/gf.c:4021 tojlinvoke84806.1 at /opt/julia/lib/julia/sys.so (unknown line) j_count_added_nodeNOT._79401.1 at /opt/julia/lib/julia/sys.so (unknown line) insert_node! at ./../usr/share/julia/Compiler/src/ssair/ir.jl:979 insert_node! at ./../usr/share/julia/Compiler/src/ssair/ir.jl:976 [inlined] perform_lifting! at ./../usr/share/julia/Compiler/src/ssair/passes.jl:842 perform_lifting! at ./../usr/share/julia/Compiler/src/ssair/passes.jl:779 [inlined] sroa_pass! at ./../usr/share/julia/Compiler/src/ssair/passes.jl:1496 run_passes_ipo_safe at ./../usr/share/julia/Compiler/src/optimize.jl:1013 run_passes_ipo_safe at ./../usr/share/julia/Compiler/src/optimize.jl:1027 [inlined] optimize at ./../usr/share/julia/Compiler/src/optimize.jl:1002 jfptr_optimize_82456.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 finish_nocycle at ./../usr/share/julia/Compiler/src/typeinfer.jl:202 jfptr_finish_nocycle_83247.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 typeinf at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:4508 typeinf_ext at ./../usr/share/julia/Compiler/src/typeinfer.jl:1254 typeinf_ext_toplevel at ./../usr/share/julia/Compiler/src/typeinfer.jl:1437 [inlined] typeinf_ext_toplevel at ./../usr/share/julia/Compiler/src/typeinfer.jl:1446 jfptr_typeinf_ext_toplevel_83488.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2391 [inlined] jl_type_infer at /source/src/gf.c:466 jl_compile_method_internal at /source/src/gf.c:3516 _jl_invoke at /source/src/gf.c:4006 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2391 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:689 jl_interpret_toplevel_thunk at /source/src/interpreter.c:898 jl_toplevel_eval_flex at /source/src/toplevel.c:1035 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 include_string at ./loading.jl:2870 _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 _include at ./loading.jl:2930 include at ./Base.jl:307 IncludeInto at ./Base.jl:308 jfptr_IncludeInto_61918.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2391 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:689 jl_interpret_toplevel_thunk at /source/src/interpreter.c:898 jl_toplevel_eval_flex at /source/src/toplevel.c:1035 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 include_string at ./loading.jl:2870 _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 _include at ./loading.jl:2930 include at ./Base.jl:307 IncludeInto at ./Base.jl:308 jfptr_IncludeInto_61918.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2391 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:689 jl_interpret_toplevel_thunk at /source/src/interpreter.c:898 jl_toplevel_eval_flex at /source/src/toplevel.c:1035 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 exec_options at ./client.jl:283 _start at ./client.jl:550 jfptr__start_55866.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2391 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1139 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x79d1a23dd249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== Testing all possible combinations... ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 poptask at ./task.jl:1216 wait at ./task.jl:1228 #wait#398 at ./condition.jl:141 wait at ./process.jl:685 wait at ./process.jl:686 jfptr_wait_46335.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 subprocess_handler at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2553 unknown function (ip: 0x7e24ea58c133) at (unknown file) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 #205 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2493 withenv at ./env.jl:265 #190 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2308 with_temp_env at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2161 #186 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2275 #mktempdir#21 at ./file.jl:936 unknown function (ip: 0x7e24ea589a9c) at (unknown file) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 mktempdir at ./file.jl:932 mktempdir at ./file.jl:932 #sandbox#182 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2222 [inlined] sandbox at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2212 unknown function (ip: 0x7e24ea57d1f1) at (unknown file) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 #test#193 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2478 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2384 [inlined] #test#170 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:538 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:515 unknown function (ip: 0x7e24ea57c751) at (unknown file) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 #test#84 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:169 unknown function (ip: 0x7e24ea5794d0) at (unknown file) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:158 #test#82 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:157 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:157 [inlined] #test#81 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:156 [inlined] test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:156 unknown function (ip: 0x7e24ea57231f) at (unknown file) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2391 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:689 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 jl_interpret_toplevel_thunk at /source/src/interpreter.c:898 jl_toplevel_eval_flex at /source/src/toplevel.c:1035 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 include_string at ./loading.jl:2870 _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 _include at ./loading.jl:2930 include at ./Base.jl:306 exec_options at ./client.jl:317 _start at ./client.jl:550 jfptr__start_55866.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2391 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1139 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x7e2506622249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.12/Profile/src/Profile.jl:1361 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x00007e24ec1fc010 Total snapshots: 377. Utilization: 0% ╎377 @Base/client.jl:550 _start() ╎ 377 @Base/client.jl:317 exec_options(opts::Base.JLOptions) ╎ 377 @Base/Base.jl:306 include(mod::Module, _path::String) ╎ 377 @Base/loading.jl:2930 _include(mapexpr::Function, mod::Module, _pat… ╎ 377 @Base/loading.jl:2870 include_string(mapexpr::typeof(identity), mo… ╎ 377 @Base/boot.jl:489 eval(m::Module, e::Any) ╎ ╎ 377 @Pkg/src/API.jl:156 kwcall(::@NamedTuple{julia_args::Cmd}, ::typ… ╎ ╎ 377 @Pkg/src/API.jl:156 #test#81 ╎ ╎ 377 @Pkg/src/API.jl:157 test ╎ ╎ 377 @Pkg/src/API.jl:157 test(pkgs::Vector{String}; kwargs::Base.P… ╎ ╎ 377 @Pkg/src/API.jl:158 kwcall(::@NamedTuple{julia_args::Cmd}, :… ╎ ╎ ╎ 377 @Pkg/src/API.jl:169 test(pkgs::Vector{PackageSpec}; io::IOC… ╎ ╎ ╎ 377 @Pkg/src/API.jl:515 kwcall(::@NamedTuple{julia_args::Cmd, … ╎ ╎ ╎ 377 @Pkg/src/API.jl:538 test(ctx::Pkg.Types.Context, pkgs::Ve… ╎ ╎ ╎ 377 @Pkg/…erations.jl:2384 test ╎ ╎ ╎ 377 @Pkg/…erations.jl:2478 test(ctx::Pkg.Types.Context, pkg… ╎ ╎ ╎ ╎ 377 @Pkg/…rations.jl:2212 kwcall(::@NamedTuple{preferences… ╎ ╎ ╎ ╎ 377 @Pkg/…rations.jl:2222 #sandbox#182 ╎ ╎ ╎ ╎ 377 @Base/file.jl:932 mktempdir(fn::Function) ╎ ╎ ╎ ╎ 377 @Base/file.jl:932 mktempdir(fn::Function, parent::S… ╎ ╎ ╎ ╎ 377 @Base/file.jl:936 mktempdir(fn::Pkg.Operations.var… ╎ ╎ ╎ ╎ ╎ 377 @Pkg/…tions.jl:2275 (::Pkg.Operations.var"#186#18… ╎ ╎ ╎ ╎ ╎ 377 @Pkg/…tions.jl:2161 with_temp_env(fn::Pkg.Operat… ╎ ╎ ╎ ╎ ╎ 377 @Pkg/…tions.jl:2308 (::Pkg.Operations.var"#190#… ╎ ╎ ╎ ╎ ╎ 377 @Base/env.jl:265 withenv(::Pkg.Operations.var"… ╎ ╎ ╎ ╎ ╎ 377 @Pkg/…ions.jl:2493 (::Pkg.Operations.var"#205… ╎ ╎ ╎ ╎ ╎ ╎ 377 @Pkg/…ons.jl:2553 subprocess_handler(cmd::Cm… ╎ ╎ ╎ ╎ ╎ ╎ 377 @Base/…ss.jl:686 wait(x::Base.Process) ╎ ╎ ╎ ╎ ╎ ╎ 377 @Base/…ss.jl:685 wait(x::Base.Process, syn… ╎ ╎ ╎ ╎ ╎ ╎ 377 @Base/…on.jl:141 wait(c::Base.GenericCond… ╎ ╎ ╎ ╎ ╎ ╎ 377 @Base/…sk.jl:1228 wait() 376╎ ╎ ╎ ╎ ╎ ╎ ╎ 377 @Base/…sk.jl:1216 poptask(W::Base.Intru… [1] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 poptask at ./task.jl:1216 wait at ./task.jl:1228 #wait#398 at ./condition.jl:141 _trywait at ./asyncevent.jl:163 profile_printing_listener at ./Base.jl:332 #start_profile_listener##0 at ./Base.jl:352 jfptr_YY.start_profile_listenerYY.YY.0_18905.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2391 [inlined] start_task at /source/src/task.c:1252 unknown function (ip: (nil)) at (unknown file) Allocations: 29032433 (Pool: 29031789; Big: 644); GC: 22 [501] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/BetaML/h8dAU/test/Trees_tests.jl:286 _ZN4llvm13X86AsmPrinter23EmitAndCountInstructionERNS_6MCInstE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) unknown function (ip: (nil)) at (unknown file) Allocations: 1322219688 (Pool: 1322216276; Big: 3412); GC: 1124 PkgEval terminated after 2726.09s: test duration exceeded the time limit