Package evaluation of openPMD on Julia 1.13.0-DEV.853 (3e868b27cf*) started at 2025-07-17T01:52:21.317


################################################################################
# Set-up
#


Set-up completed after 0.24s


################################################################################
# Installation
#

Installing openPMD...
   Resolving package versions...
    Updating `~/.julia/environments/v1.13/Project.toml`
  [e4c73209] + openPMD v0.3.2
    Updating `~/.julia/environments/v1.13/Manifest.toml`
⌅ [1f15a43c] + CxxWrap v0.14.2
  [ffbed154] + DocStringExtensions v0.9.5
  [692b3bcd] + JLLWrappers v1.7.0
  [da04e1cc] + MPI v0.20.22
  [3da0fdf6] + MPIPreferences v0.1.11
  [1914dd2f] + MacroTools v0.5.16
  [c03570c3] + Memoize v0.4.4
  [eebad327] + PkgVersion v0.3.3
  [aea7be01] + PrecompileTools v1.3.2
  [21216c6a] + Preferences v1.4.3
  [ae029012] + Requires v1.3.1
  [90137ffa] + StaticArrays v1.9.14
  [1e83bf80] + StaticArraysCore v1.4.3
  [e4c73209] + openPMD v0.3.2
⌃ [44b1415a] + ADIOS2_jll v2.10.3+0
  [d43303dc] + Blosc2_jll v201.1800.0+0
  [6e34b625] + Bzip2_jll v1.0.9+0
⌅ [0234f1f7] + HDF5_jll v1.14.3+3
  [e33a78d0] + Hwloc_jll v2.12.1+0
  [5ced341a] + Lz4_jll v1.10.1+0
  [7cb0a576] + MPICH_jll v4.3.1+0
  [f1f71cc9] + MPItrampoline_jll v5.5.4+0
  [9237b28f] + MicrosoftMPI_jll v10.1.4+3
⌅ [fe0851c0] + OpenMPI_jll v4.1.8+1
  [8f1865be] + ZeroMQ_jll v4.3.6+0
  [477f73a3] + libaec_jll v1.1.3+0
⌅ [3eaa8342] + libcxxwrap_julia_jll v0.11.2+1
  [b53b4c65] + libpng_jll v1.6.50+0
  [a9144af2] + libsodium_jll v1.0.21+0
  [0cbd5639] + openPMD_api_jll v0.16.3+0
  [c7845625] + protoc_jll v105.29.3+0
  [ef860afa] + pugixml_jll v1.14.1+0
  [01fea8cc] + yaml_cpp_jll v0.8.1+0
  [007be453] + zfp_jll v1.0.2+0
  [0dad84c5] + ArgTools v1.1.2
  [56f22d72] + Artifacts v1.11.0
  [2a0f44e3] + Base64 v1.11.0
  [ade2ca70] + Dates v1.11.0
  [8ba89e20] + Distributed v1.11.0
  [f43a241f] + Downloads v1.7.0
  [7b1f6079] + FileWatching v1.11.0
  [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0
  [4af54fe1] + LazyArtifacts v1.11.0
  [b27032c2] + LibCURL v0.6.4
  [76f85450] + LibGit2 v1.11.0
  [8f399da3] + Libdl v1.11.0
  [37e2e46d] + LinearAlgebra v1.12.0
  [56ddb016] + Logging v1.11.0
  [d6f4376e] + Markdown v1.11.0
  [ca575930] + NetworkOptions v1.3.0
  [44cfe95a] + Pkg v1.13.0
  [de0858da] + Printf v1.11.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v0.7.0
  [9e88b42a] + Serialization v1.11.0
  [6462fe0b] + Sockets v1.11.0
  [f489334b] + StyledStrings v1.11.0
  [fa267f1f] + TOML v1.0.3
  [a4e569a6] + Tar v1.10.0
  [cf7118a7] + UUIDs v1.11.0
  [4ec0a83e] + Unicode v1.11.0
  [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1
  [deac9b47] + LibCURL_jll v8.14.1+1
  [e37daf67] + LibGit2_jll v1.9.1+0
  [29816b5a] + LibSSH2_jll v1.11.3+1
  [14a3606d] + MozillaCACerts_jll v2025.5.20
  [4536629a] + OpenBLAS_jll v0.3.29+0
  [458c3c95] + OpenSSL_jll v3.5.1+0
  [efcefdf7] + PCRE2_jll v10.45.0+0
  [83775a58] + Zlib_jll v1.3.1+2
  [3161d3a3] + Zstd_jll v1.5.7+1
  [8e850b90] + libblastrampoline_jll v5.13.1+0
  [8e850ede] + nghttp2_jll v1.65.0+0
  [3f19e933] + p7zip_jll v17.5.0+2
        Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m`

Installation completed after 13.08s


################################################################################
# Precompilation
#

Precompiling PkgEval dependencies...
No packages added to or removed from `~/.julia/environments/pkgeval/Project.toml`
No packages added to or removed from `~/.julia/environments/pkgeval/Manifest.toml`

Precompiling package dependencies...
Precompiling packages...
   1686.5 ms  ✓ libcxxwrap_julia_jll
  14475.1 ms  ✓ ADIOS2_jll
           ✗ CxxWrap
   1542.5 ms  ✓ openPMD_api_jll
           ✗ openPMD
  3 dependencies successfully precompiled in 35 seconds. 59 already precompiled.

ERROR: LoadError: The following 1 direct dependency failed to precompile:

openPMD 

Failed to precompile openPMD [e4c73209-6c8c-4213-807b-38d671e094ab] to "/home/pkgeval/.julia/compiled/v1.13/openPMD/jl_85NXQ7" (ProcessExited(1)).
ERROR: LoadError: libcxxwrap_julia_jll not available on this platform
Stacktrace:
  [1] error(s::String)
    @ Base ./error.jl:44
  [2] top-level scope
    @ ~/.julia/packages/CxxWrap/5IZvn/src/CxxWrap.jl:18
  [3] include(mod::Module, _path::String)
    @ Base ./Base.jl:309
  [4] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String)
    @ Base ./loading.jl:3002
  [5] top-level scope
    @ stdin:5
  [6] eval(m::Module, e::Any)
    @ Core ./boot.jl:489
  [7] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base ./loading.jl:2848
  [8] include_string
    @ ./loading.jl:2858 [inlined]
  [9] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:318
 [10] _start()
    @ Base ./client.jl:553
in expression starting at /home/pkgeval/.julia/packages/CxxWrap/5IZvn/src/CxxWrap.jl:1
in expression starting at stdin:5
ERROR: LoadError: Failed to precompile CxxWrap [1f15a43c-97ca-5a2a-ae31-89f07a497df4] to "/home/pkgeval/.julia/compiled/v1.13/CxxWrap/jl_SjGV3J" (ProcessExited(1)).
Stacktrace:
  [1] error(s::String)
    @ Base ./error.jl:44
  [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing)
    @ Base ./loading.jl:3289
  [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})()
    @ Base ./loading.jl:2654
  [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool})
    @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94
  [5] #mkpidlock#7
    @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined]
  [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64})
    @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115
  [7] #invokelatest_gr#236
    @ ./reflection.jl:1332 [inlined]
  [8] invokelatest_gr
    @ ./reflection.jl:1324 [inlined]
  [9] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)
    @ Base ./loading.jl:3860
 [10] maybe_cachefile_lock
    @ ./loading.jl:3857 [inlined]
 [11] __require_prelocked(pkg::Base.PkgId, env::String)
    @ Base ./loading.jl:2640
 [12] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:2468
 [13] macro expansion
    @ ./loading.jl:2396 [inlined]
 [14] macro expansion
    @ ./lock.jl:376 [inlined]
 [15] __require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2360
 [16] require
    @ ./loading.jl:2336 [inlined]
 [17] eval_import_path
    @ ./module.jl:36 [inlined]
 [18] eval_import_path_all(at::Module, path::Expr, keyword::String)
    @ Base ./module.jl:60
 [19] _eval_using(to::Module, path::Expr)
    @ Base ./module.jl:137
 [20] top-level scope
    @ ~/.julia/packages/openPMD/1A9D7/src/openPMD.jl:3
 [21] include(mod::Module, _path::String)
    @ Base ./Base.jl:309
 [22] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base ./loading.jl:3002
 [23] top-level scope
    @ stdin:5
 [24] eval(m::Module, e::Any)
    @ Core ./boot.jl:489
 [25] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base ./loading.jl:2848
 [26] include_string
    @ ./loading.jl:2858 [inlined]
 [27] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:318
 [28] _start()
    @ Base ./client.jl:553
in expression starting at /home/pkgeval/.julia/packages/openPMD/1A9D7/src/openPMD.jl:1
in expression starting at stdin:
in expression starting at /PkgEval.jl/scripts/precompile.jl:37

Precompilation failed after 41.26s



################################################################################
# Loading
#

Loading openPMD...
Precompiling packages...
           ✗ CxxWrap
Info Given openPMD was explicitly requested, output will be shown live 
ERROR: LoadError: libcxxwrap_julia_jll not available on this platform
Stacktrace:
  [1] error(s::String)
    @ Base ./error.jl:44
  [2] top-level scope
    @ ~/.julia/packages/CxxWrap/5IZvn/src/CxxWrap.jl:18
  [3] include(mod::Module, _path::String)
    @ Base ./Base.jl:309
  [4] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String)
    @ Base ./loading.jl:3002
  [5] top-level scope
    @ stdin:5
  [6] eval(m::Module, e::Any)
    @ Core ./boot.jl:489
  [7] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base ./loading.jl:2848
  [8] include_string
    @ ./loading.jl:2858 [inlined]
  [9] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:318
 [10] _start()
    @ Base ./client.jl:553
in expression starting at /home/pkgeval/.julia/packages/CxxWrap/5IZvn/src/CxxWrap.jl:1
in expression starting at stdin:5
ERROR: LoadError: Failed to precompile CxxWrap [1f15a43c-97ca-5a2a-ae31-89f07a497df4] to "/home/pkgeval/.julia/compiled/v1.13/CxxWrap/jl_2PQpJV" (ProcessExited(1)).
Stacktrace:
  [1] error(s::String)
    @ Base ./error.jl:44
  [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing)
    @ Base ./loading.jl:3289
  [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})()
    @ Base ./loading.jl:2654
  [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool})
    @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94
  [5] #mkpidlock#7
    @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined]
  [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64})
    @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115
  [7] #invokelatest_gr#236
    @ ./reflection.jl:1332 [inlined]
  [8] invokelatest_gr
    @ ./reflection.jl:1324 [inlined]
  [9] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)
    @ Base ./loading.jl:3860
 [10] maybe_cachefile_lock
    @ ./loading.jl:3857 [inlined]
 [11] __require_prelocked(pkg::Base.PkgId, env::String)
    @ Base ./loading.jl:2640
 [12] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:2468
 [13] macro expansion
    @ ./loading.jl:2396 [inlined]
 [14] macro expansion
    @ ./lock.jl:376 [inlined]
 [15] __require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2360
 [16] require
    @ ./loading.jl:2336 [inlined]
 [17] eval_import_path
    @ ./module.jl:36 [inlined]
 [18] eval_import_path_all(at::Module, path::Expr, keyword::String)
    @ Base ./module.jl:60
 [19] _eval_using(to::Module, path::Expr)
    @ Base ./module.jl:137
 [20] top-level scope
    @ ~/.julia/packages/openPMD/1A9D7/src/openPMD.jl:3
 [21] include(mod::Module, _path::String)
    @ Base ./Base.jl:309
 [22] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base ./loading.jl:3002
 [23] top-level scope
    @ stdin:5
 [24] eval(m::Module, e::Any)
    @ Core ./boot.jl:489
 [25] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base ./loading.jl:2848
 [26] include_string
    @ ./loading.jl:2858 [inlined]
 [27] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:318
 [28] _start()
    @ Base ./client.jl:553
in expression starting at /home/pkgeval/.julia/packages/openPMD/1A9D7/src/openPMD.jl:1
in expression starting at stdin:5
           ✗ openPMD
  0 dependencies successfully precompiled in 11 seconds. 62 already precompiled.

ERROR: The following 1 direct dependency failed to precompile:

openPMD 

Failed to precompile openPMD [e4c73209-6c8c-4213-807b-38d671e094ab] to "/home/pkgeval/.julia/compiled/v1.13/openPMD/jl_XlBLEN" (ProcessExited(1)).
ERROR: LoadError: libcxxwrap_julia_jll not available on this platform
Stacktrace:
  [1] error(s::String)
    @ Base ./error.jl:44
  [2] top-level scope
    @ ~/.julia/packages/CxxWrap/5IZvn/src/CxxWrap.jl:18
  [3] include(mod::Module, _path::String)
    @ Base ./Base.jl:309
  [4] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String)
    @ Base ./loading.jl:3002
  [5] top-level scope
    @ stdin:5
  [6] eval(m::Module, e::Any)
    @ Core ./boot.jl:489
  [7] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base ./loading.jl:2848
  [8] include_string
    @ ./loading.jl:2858 [inlined]
  [9] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:318
 [10] _start()
    @ Base ./client.jl:553
in expression starting at /home/pkgeval/.julia/packages/CxxWrap/5IZvn/src/CxxWrap.jl:1
in expression starting at stdin:5
ERROR: LoadError: Failed to precompile CxxWrap [1f15a43c-97ca-5a2a-ae31-89f07a497df4] to "/home/pkgeval/.julia/compiled/v1.13/CxxWrap/jl_2PQpJV" (ProcessExited(1)).
Stacktrace:
  [1] error(s::String)
    @ Base ./error.jl:44
  [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing)
    @ Base ./loading.jl:3289
  [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})()
    @ Base ./loading.jl:2654
  [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool})
    @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94
  [5] #mkpidlock#7
    @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined]
  [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64})
    @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115
  [7] #invokelatest_gr#236
    @ ./reflection.jl:1332 [inlined]
  [8] invokelatest_gr
    @ ./reflection.jl:1324 [inlined]
  [9] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)
    @ Base ./loading.jl:3860
 [10] maybe_cachefile_lock
    @ ./loading.jl:3857 [inlined]
 [11] __require_prelocked(pkg::Base.PkgId, env::String)
    @ Base ./loading.jl:2640
 [12] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:2468
 [13] macro expansion
    @ ./loading.jl:2396 [inlined]
 [14] macro expansion
    @ ./lock.jl:376 [inlined]
 [15] __require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2360
 [16] require
    @ ./loading.jl:2336 [inlined]
 [17] eval_import_path
    @ ./module.jl:36 [inlined]
 [18] eval_import_path_all(at::Module, path::Expr, keyword::String)
    @ Base ./module.jl:60
 [19] _eval_using(to::Module, path::Expr)
    @ Base ./module.jl:137
 [20] top-level scope
    @ ~/.julia/packages/openPMD/1A9D7/src/openPMD.jl:3
 [21] include(mod::Module, _path::String)
    @ Base ./Base.jl:309
 [22] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base ./loading.jl:3002
 [23] top-level scope
    @ stdin:5
 [24] eval(m::Module, e::Any)
    @ Core ./boot.jl:489
 [25] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base ./loading.jl:2848
 [26] include_string
    @ ./loading.jl:2858 [inlined]
 [27] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:318
 [28] _start()
    @ Base ./client.jl:553
in expression starting at /home/pkgeval/.julia/packages/openPMD/1A9D7/src/openPMD.jl:1
in expression starting at stdin:

Loading failed after 13.39s

ERROR: LoadError: failed process: Process(`/opt/julia/bin/julia -C native -J/opt/julia/lib/julia/sys.so -g1 --check-bounds=yes --inline=yes --pkgimages=existing -e 'using openPMD'`, ProcessExited(1)) [1]

Stacktrace:
 [1] pipeline_error
   @ ./process.jl:602 [inlined]
 [2] run(::Cmd; wait::Bool)
   @ Base ./process.jl:517
 [3] run(::Cmd)
   @ Base ./process.jl:514
 [4] top-level scope
   @ /PkgEval.jl/scripts/evaluate.jl:193
 [5] include(mod::Module, _path::String)
   @ Base ./Base.jl:309
 [6] exec_options(opts::Base.JLOptions)
   @ Base ./client.jl:320
 [7] _start()
   @ Base ./client.jl:553
in expression starting at /PkgEval.jl/scripts/evaluate.jl:184

PkgEval failed after 134.25s: package fails to precompile