Package evaluation of RecurrenceAnalysis on Julia 1.13.0-DEV.853 (3e868b27cf*) started at 2025-07-17T02:12:34.280


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# Set-up
#

Installing PkgEval dependencies (TestEnv)...

Set-up completed after 6.44s


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# Installation
#

Installing RecurrenceAnalysis...
   Resolving package versions...
    Updating `~/.julia/environments/v1.13/Project.toml`
  [639c3291] + RecurrenceAnalysis v2.1.2
    Updating `~/.julia/environments/v1.13/Manifest.toml`
  [66dad0bd] + AliasTables v1.1.3
  [ec485272] + ArnoldiMethod v0.4.0
  [35d6a980] + ColorSchemes v3.30.0
  [3da002f7] + ColorTypes v0.12.1
  [c3611d14] + ColorVectorSpace v0.11.0
  [5ae59095] + Colors v0.13.1
  [34da2185] + Compat v4.17.0
  [d38c429a] + Contour v0.6.3
  [a8cc5b0e] + Crayons v4.1.1
  [9a962f9c] + DataAPI v1.16.0
  [864edb3b] + DataStructures v0.18.22
  [8bb1440f] + DelimitedFiles v1.9.1
  [b4f34e82] + Distances v0.10.12
  [ffbed154] + DocStringExtensions v0.9.5
  [53c48c17] + FixedPointNumbers v0.8.5
  [86223c79] + Graphs v1.13.0
  [d25df0c9] + Inflate v0.1.5
  [92d709cd] + IrrationalConstants v0.2.4
  [2ab3a3ac] + LogExpFunctions v0.3.29
  [1914dd2f] + MacroTools v0.5.16
  [299715c1] + MarchingCubes v0.1.11
  [e1d29d7a] + Missings v1.2.0
  [77ba4419] + NaNMath v1.1.3
  [b8a86587] + NearestNeighbors v0.4.22
  [645ca80c] + Neighborhood v0.2.4
  [bac558e1] + OrderedCollections v1.8.1
  [aea7be01] + PrecompileTools v1.3.2
  [21216c6a] + Preferences v1.4.3
  [43287f4e] + PtrArrays v1.3.0
  [639c3291] + RecurrenceAnalysis v2.1.2
  [189a3867] + Reexport v1.2.2
  [ae029012] + Requires v1.3.1
  [699a6c99] + SimpleTraits v0.9.4
  [a2af1166] + SortingAlgorithms v1.2.1
  [40b095a5] + StateSpaceSets v2.4.0
  [90137ffa] + StaticArrays v1.9.14
  [1e83bf80] + StaticArraysCore v1.4.3
  [10745b16] + Statistics v1.11.1
  [82ae8749] + StatsAPI v1.7.1
  [2913bbd2] + StatsBase v0.34.5
  [62fd8b95] + TensorCore v0.1.1
  [b8865327] + UnicodePlots v3.8.1
  [56f22d72] + Artifacts v1.11.0
  [2a0f44e3] + Base64 v1.11.0
  [ade2ca70] + Dates v1.11.0
  [8ba89e20] + Distributed v1.11.0
  [b77e0a4c] + InteractiveUtils v1.11.0
  [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0
  [8f399da3] + Libdl v1.11.0
  [37e2e46d] + LinearAlgebra v1.12.0
  [56ddb016] + Logging v1.11.0
  [d6f4376e] + Markdown v1.11.0
  [a63ad114] + Mmap v1.11.0
  [de0858da] + Printf v1.11.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v0.7.0
  [9e88b42a] + Serialization v1.11.0
  [1a1011a3] + SharedArrays v1.11.0
  [6462fe0b] + Sockets v1.11.0
  [2f01184e] + SparseArrays v1.12.0
  [f489334b] + StyledStrings v1.11.0
  [fa267f1f] + TOML v1.0.3
  [8dfed614] + Test v1.11.0
  [cf7118a7] + UUIDs v1.11.0
  [4ec0a83e] + Unicode v1.11.0
  [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1
  [4536629a] + OpenBLAS_jll v0.3.29+0
  [05823500] + OpenLibm_jll v0.8.5+0
  [bea87d4a] + SuiteSparse_jll v7.10.1+0
  [8e850b90] + libblastrampoline_jll v5.13.1+0

Installation completed after 3.07s


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# Precompilation
#

Precompiling PkgEval dependencies...

Precompiling package dependencies...

Precompilation completed after 14.04s


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# Testing
#

     Testing RecurrenceAnalysis
      Status `/tmp/jl_Tv2EjI/Project.toml`
  [5732040d] DelayEmbeddings v2.9.0
  [8bb1440f] DelimitedFiles v1.9.1
  [b4f34e82] Distances v0.10.12
  [86223c79] Graphs v1.13.0
  [639c3291] RecurrenceAnalysis v2.1.2
  [10745b16] Statistics v1.11.1
  [f43a241f] Downloads v1.7.0
  [37e2e46d] LinearAlgebra v1.12.0
  [9a3f8284] Random v1.11.0
  [2f01184e] SparseArrays v1.12.0
  [8dfed614] Test v1.11.0
      Status `/tmp/jl_Tv2EjI/Manifest.toml`
  [66dad0bd] AliasTables v1.1.3
  [ec485272] ArnoldiMethod v0.4.0
  [35d6a980] ColorSchemes v3.30.0
  [3da002f7] ColorTypes v0.12.1
  [c3611d14] ColorVectorSpace v0.11.0
  [5ae59095] Colors v0.13.1
  [34da2185] Compat v4.17.0
  [d38c429a] Contour v0.6.3
  [a8cc5b0e] Crayons v4.1.1
  [9a962f9c] DataAPI v1.16.0
  [864edb3b] DataStructures v0.18.22
  [5732040d] DelayEmbeddings v2.9.0
  [8bb1440f] DelimitedFiles v1.9.1
  [b4f34e82] Distances v0.10.12
  [31c24e10] Distributions v0.25.120
  [ffbed154] DocStringExtensions v0.9.5
  [1a297f60] FillArrays v1.13.0
  [53c48c17] FixedPointNumbers v0.8.5
  [86223c79] Graphs v1.13.0
  [34004b35] HypergeometricFunctions v0.3.28
  [d25df0c9] Inflate v0.1.5
  [92d709cd] IrrationalConstants v0.2.4
  [692b3bcd] JLLWrappers v1.7.0
  [2ab3a3ac] LogExpFunctions v0.3.29
  [1914dd2f] MacroTools v0.5.16
  [299715c1] MarchingCubes v0.1.11
  [e1d29d7a] Missings v1.2.0
  [77ba4419] NaNMath v1.1.3
  [b8a86587] NearestNeighbors v0.4.22
  [645ca80c] Neighborhood v0.2.4
  [bac558e1] OrderedCollections v1.8.1
  [90014a1f] PDMats v0.11.35
  [aea7be01] PrecompileTools v1.3.2
  [21216c6a] Preferences v1.4.3
  [43287f4e] PtrArrays v1.3.0
  [1fd47b50] QuadGK v2.11.2
  [639c3291] RecurrenceAnalysis v2.1.2
  [189a3867] Reexport v1.2.2
  [ae029012] Requires v1.3.1
  [79098fc4] Rmath v0.8.0
  [699a6c99] SimpleTraits v0.9.4
  [a2af1166] SortingAlgorithms v1.2.1
  [276daf66] SpecialFunctions v2.5.1
  [40b095a5] StateSpaceSets v2.4.0
  [90137ffa] StaticArrays v1.9.14
  [1e83bf80] StaticArraysCore v1.4.3
  [10745b16] Statistics v1.11.1
  [82ae8749] StatsAPI v1.7.1
  [2913bbd2] StatsBase v0.34.5
  [4c63d2b9] StatsFuns v1.5.0
  [62fd8b95] TensorCore v0.1.1
  [b8865327] UnicodePlots v3.8.1
  [efe28fd5] OpenSpecFun_jll v0.5.6+0
  [f50d1b31] Rmath_jll v0.5.1+0
  [0dad84c5] ArgTools v1.1.2
  [56f22d72] Artifacts v1.11.0
  [2a0f44e3] Base64 v1.11.0
  [ade2ca70] Dates v1.11.0
  [8ba89e20] Distributed v1.11.0
  [f43a241f] Downloads v1.7.0
  [7b1f6079] FileWatching v1.11.0
  [b77e0a4c] InteractiveUtils v1.11.0
  [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0
  [b27032c2] LibCURL v0.6.4
  [8f399da3] Libdl v1.11.0
  [37e2e46d] LinearAlgebra v1.12.0
  [56ddb016] Logging v1.11.0
  [d6f4376e] Markdown v1.11.0
  [a63ad114] Mmap v1.11.0
  [ca575930] NetworkOptions v1.3.0
  [de0858da] Printf v1.11.0
  [9a3f8284] Random v1.11.0
  [ea8e919c] SHA v0.7.0
  [9e88b42a] Serialization v1.11.0
  [1a1011a3] SharedArrays v1.11.0
  [6462fe0b] Sockets v1.11.0
  [2f01184e] SparseArrays v1.12.0
  [f489334b] StyledStrings v1.11.0
  [4607b0f0] SuiteSparse
  [fa267f1f] TOML v1.0.3
  [8dfed614] Test v1.11.0
  [cf7118a7] UUIDs v1.11.0
  [4ec0a83e] Unicode v1.11.0
  [e66e0078] CompilerSupportLibraries_jll v1.3.0+1
  [deac9b47] LibCURL_jll v8.14.1+1
  [29816b5a] LibSSH2_jll v1.11.3+1
  [14a3606d] MozillaCACerts_jll v2025.5.20
  [4536629a] OpenBLAS_jll v0.3.29+0
  [05823500] OpenLibm_jll v0.8.5+0
  [458c3c95] OpenSSL_jll v3.5.1+0
  [bea87d4a] SuiteSparse_jll v7.10.1+0
  [83775a58] Zlib_jll v1.3.1+2
  [8e850b90] libblastrampoline_jll v5.13.1+0
  [8e850ede] nghttp2_jll v1.65.0+0
     Testing Running tests...
running test file rmatrix_analytic.jl
running test file rqa_rna_analytic.jl
┌ Warning: Infinite path length detected for vertex 1
└ @ Graphs ~/.julia/packages/Graphs/awp48/src/distance.jl:78
┌ Warning: Infinite path length detected for vertex 2
└ @ Graphs ~/.julia/packages/Graphs/awp48/src/distance.jl:78
┌ Warning: Infinite path length detected for vertex 3
└ @ Graphs ~/.julia/packages/Graphs/awp48/src/distance.jl:78
┌ Warning: Infinite path length detected for vertex 4
└ @ Graphs ~/.julia/packages/Graphs/awp48/src/distance.jl:78
┌ Warning: Infinite path length detected for vertex 5
└ @ Graphs ~/.julia/packages/Graphs/awp48/src/distance.jl:78
┌ Warning: Infinite path length detected for vertex 6
└ @ Graphs ~/.julia/packages/Graphs/awp48/src/distance.jl:78
┌ Warning: Infinite path length detected for vertex 7
└ @ Graphs ~/.julia/packages/Graphs/awp48/src/distance.jl:78
┌ Warning: Infinite path length detected for vertex 8
└ @ Graphs ~/.julia/packages/Graphs/awp48/src/distance.jl:78
┌ Warning: Infinite path length detected for vertex 9
└ @ Graphs ~/.julia/packages/Graphs/awp48/src/distance.jl:78
┌ Warning: Infinite path length detected for vertex 10
└ @ Graphs ~/.julia/packages/Graphs/awp48/src/distance.jl:78
running test file skeletontest.jl
running test file windowtest.jl
Test Summary:            | Pass  Total     Time
RecurrenceAnalysis tests |  124    124  1m13.0s
     Testing RecurrenceAnalysis tests passed 

Testing completed after 83.88s

PkgEval succeeded after 136.6s