Package evaluation of Peridynamics on Julia 1.13.0-DEV.853 (3e868b27cf*) started at 2025-07-17T03:40:35.847


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# Set-up
#


Set-up completed after 0.25s


################################################################################
# Installation
#

Installing Peridynamics...
   Resolving package versions...
    Updating `~/.julia/environments/v1.13/Project.toml`
  [4dc47793] + Peridynamics v0.4.1
    Updating `~/.julia/environments/v1.13/Manifest.toml`
  [bc6b9049] + AbaqusReader v0.2.6
  [79e6a3ab] + Adapt v4.3.0
  [4fba245c] + ArrayInterface v7.19.0
  [a9b6321e] + Atomix v1.1.1
  [62783981] + BitTwiddlingConvenienceFunctions v0.1.6
  [fa961155] + CEnum v0.5.0
  [2a0fbf3d] + CPUSummary v0.2.6
  [fb6a15b2] + CloseOpenIntervals v0.1.13
  [944b1d66] + CodecZlib v0.7.8
  [f70d9fcc] + CommonWorldInvalidations v1.0.0
  [34da2185] + Compat v4.17.0
  [adafc99b] + CpuId v0.3.1
  [8bb1440f] + DelimitedFiles v1.9.1
  [ffbed154] + DocStringExtensions v0.9.5
  [e2ba6199] + ExprTools v0.1.10
  [1a297f60] + FillArrays v1.13.0
  [46192b85] + GPUArraysCore v0.2.0
  [0e44f5e4] + Hwloc v3.3.0
  [615f187c] + IfElse v0.1.1
  [692b3bcd] + JLLWrappers v1.7.0
  [63c18a36] + KernelAbstractions v0.9.37
  [10f19ff3] + LayoutPointers v0.1.17
  [9c8b4983] + LightXML v0.9.2
  [da04e1cc] + MPI v0.20.22
  [3da0fdf6] + MPIPreferences v0.1.11
  [1914dd2f] + MacroTools v0.5.16
  [d125e4d3] + ManualMemory v0.1.8
  [4d1e1d77] + Nullables v1.0.0
  [4dc47793] + Peridynamics v0.4.1
  [eebad327] + PkgVersion v0.3.3
⌅ [1c4d5385] + PointNeighbors v0.5.0
  [f517fe37] + Polyester v0.7.18
  [1d0040c9] + PolyesterWeave v0.2.2
  [aea7be01] + PrecompileTools v1.3.2
  [21216c6a] + Preferences v1.4.3
  [92933f4c] + ProgressMeter v1.10.4
  [189a3867] + Reexport v1.2.2
  [ae029012] + Requires v1.3.1
  [94e857df] + SIMDTypes v0.1.0
  [91464d47] + StableTasks v0.1.7
  [aedffcd0] + Static v1.2.0
  [0d7ed370] + StaticArrayInterface v1.8.0
  [90137ffa] + StaticArrays v1.9.14
  [1e83bf80] + StaticArraysCore v1.4.3
  [7792a7ef] + StrideArraysCore v0.5.7
  [90a7ee08] + SysInfo v0.3.0
  [811555cd] + ThreadPinning v1.0.2
  [6f48bc29] + ThreadPinningCore v0.4.5
  [8290d209] + ThreadingUtilities v0.5.5
  [a759f4b9] + TimerOutputs v0.5.29
  [3bb67fe8] + TranscodingStreams v0.11.3
  [013be700] + UnsafeAtomics v0.3.0
  [4004b06d] + VTKBase v1.0.1
  [64499a7a] + WriteVTK v1.21.2
  [e33a78d0] + Hwloc_jll v2.12.1+0
  [94ce4f54] + Libiconv_jll v1.18.0+0
  [7cb0a576] + MPICH_jll v4.3.1+0
  [f1f71cc9] + MPItrampoline_jll v5.5.4+0
  [9237b28f] + MicrosoftMPI_jll v10.1.4+3
  [fe0851c0] + OpenMPI_jll v5.0.8+0
  [02c8fc9c] + XML2_jll v2.14.4+0
  [0dad84c5] + ArgTools v1.1.2
  [56f22d72] + Artifacts v1.11.0
  [2a0f44e3] + Base64 v1.11.0
  [ade2ca70] + Dates v1.11.0
  [8ba89e20] + Distributed v1.11.0
  [f43a241f] + Downloads v1.7.0
  [7b1f6079] + FileWatching v1.11.0
  [b77e0a4c] + InteractiveUtils v1.11.0
  [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0
  [4af54fe1] + LazyArtifacts v1.11.0
  [b27032c2] + LibCURL v0.6.4
  [76f85450] + LibGit2 v1.11.0
  [8f399da3] + Libdl v1.11.0
  [37e2e46d] + LinearAlgebra v1.12.0
  [56ddb016] + Logging v1.11.0
  [d6f4376e] + Markdown v1.11.0
  [a63ad114] + Mmap v1.11.0
  [ca575930] + NetworkOptions v1.3.0
  [44cfe95a] + Pkg v1.13.0
  [de0858da] + Printf v1.11.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v0.7.0
  [9e88b42a] + Serialization v1.11.0
  [6462fe0b] + Sockets v1.11.0
  [f489334b] + StyledStrings v1.11.0
  [fa267f1f] + TOML v1.0.3
  [a4e569a6] + Tar v1.10.0
  [cf7118a7] + UUIDs v1.11.0
  [4ec0a83e] + Unicode v1.11.0
  [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1
  [deac9b47] + LibCURL_jll v8.14.1+1
  [e37daf67] + LibGit2_jll v1.9.1+0
  [29816b5a] + LibSSH2_jll v1.11.3+1
  [14a3606d] + MozillaCACerts_jll v2025.5.20
  [4536629a] + OpenBLAS_jll v0.3.29+0
  [458c3c95] + OpenSSL_jll v3.5.1+0
  [efcefdf7] + PCRE2_jll v10.45.0+0
  [83775a58] + Zlib_jll v1.3.1+2
  [8e850b90] + libblastrampoline_jll v5.13.1+0
  [8e850ede] + nghttp2_jll v1.65.0+0
  [3f19e933] + p7zip_jll v17.5.0+2
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`

Installation completed after 9.87s


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# Precompilation
#

Precompiling PkgEval dependencies...
No packages added to or removed from `~/.julia/environments/pkgeval/Project.toml`
No packages added to or removed from `~/.julia/environments/pkgeval/Manifest.toml`

Precompiling package dependencies...
Precompiling packages...
  14532.6 ms  ✓ ThreadPinning
   8226.9 ms  ✓ PointNeighbors
   2243.0 ms  ✓ ThreadPinning → DistributedExt
   6187.5 ms  ✓ ThreadPinning → MPIExt
 105512.1 ms  ✓ Peridynamics
  5 dependencies successfully precompiled in 138 seconds. 95 already precompiled.
  1 dependency had output during precompilation:
┌ Peridynamics
│  ┌ Warning: Error return code
│  │   ret = -22
│  └ @ ThreadPinningCore.Internals ~/.julia/packages/ThreadPinningCore/fdkhT/src/internals.jl:173
└  

Precompilation completed after 147.32s


################################################################################
# Loading
#

Loading Peridynamics...
┌ Warning: Error return code
│   ret = -22
└ @ ThreadPinningCore.Internals ~/.julia/packages/ThreadPinningCore/fdkhT/src/internals.jl:173
ERROR: InitError: Couldn't set the affinity on this system.
Stacktrace:
  [1] setaffinity(mask::Vector{Int8}; threadid::Int64)
    @ ThreadPinningCore.Internals ~/.julia/packages/ThreadPinningCore/fdkhT/src/internals.jl:174
  [2] setaffinity
    @ ~/.julia/packages/ThreadPinningCore/fdkhT/src/internals.jl:145 [inlined]
  [3] #pinthread#25
    @ ~/.julia/packages/ThreadPinningCore/fdkhT/src/internals.jl:192 [inlined]
  [4] pinthread
    @ ~/.julia/packages/ThreadPinningCore/fdkhT/src/internals.jl:182 [inlined]
  [5] pinthreads(cpuids::Vector{Int64}; threadpool::Symbol, threadids::UnitRange{Int64}, nthreads::Nothing, force::Bool)
    @ ThreadPinningCore.Internals ~/.julia/packages/ThreadPinningCore/fdkhT/src/internals.jl:210
  [6] pinthreads
    @ ~/.julia/packages/ThreadPinningCore/fdkhT/src/internals.jl:196 [inlined]
  [7] pinthreads(cpuids::Vector{Int64}; warn::Bool, force::Bool, kwargs::@Kwargs{})
    @ ThreadPinning.Pinning ~/.julia/packages/ThreadPinning/qBVhU/src/pinning.jl:305
  [8] pinthreads
    @ ~/.julia/packages/ThreadPinning/qBVhU/src/pinning.jl:292 [inlined]
  [9] #pinthreads#20
    @ ~/.julia/packages/ThreadPinning/qBVhU/src/pinning.jl:352 [inlined]
 [10] pinthreads(symb::Symbol; kwargs::@Kwargs{force::Bool})
    @ ThreadPinning.Pinning ~/.julia/packages/ThreadPinning/qBVhU/src/pinning.jl:346
 [11] pinthreads
    @ ~/.julia/packages/ThreadPinning/qBVhU/src/pinning.jl:346 [inlined]
 [12] __init__()
    @ Peridynamics ~/.julia/packages/Peridynamics/N7Qqk/src/Peridynamics.jl:46
 [13] run_module_init(mod::Module, i::Int64)
    @ Base ./loading.jl:1417
 [14] register_restored_modules(sv::Core.SimpleVector, pkg::Base.PkgId, path::String)
    @ Base ./loading.jl:1405
 [15] _include_from_serialized(pkg::Base.PkgId, path::String, ocachepath::Nothing, depmods::Vector{Any}; register::Bool)
    @ Base ./loading.jl:1293
 [16] _include_from_serialized
    @ ./loading.jl:1247 [inlined]
 [17] _require_search_from_serialized(pkg::Base.PkgId, sourcepath::String, build_id::UInt128, stalecheck::Bool; reasons::Dict{String, Int64}, DEPOT_PATH::Vector{String})
    @ Base ./loading.jl:2089
 [18] __require_prelocked(pkg::Base.PkgId, env::String)
    @ Base ./loading.jl:2602
 [19] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:2468
 [20] macro expansion
    @ ./loading.jl:2396 [inlined]
 [21] macro expansion
    @ ./lock.jl:376 [inlined]
 [22] __require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2360
 [23] require
    @ ./loading.jl:2336 [inlined]
 [24] eval_import_path
    @ ./module.jl:36 [inlined]
 [25] eval_import_path_all(at::Module, path::Expr, keyword::String)
    @ Base ./module.jl:60
 [26] _eval_using(to::Module, path::Expr)
    @ Base ./module.jl:137
 [27] top-level scope
    @ none:1
 [28] eval(m::Module, e::Any)
    @ Core ./boot.jl:489
 [29] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:286
 [30] _start()
    @ Base ./client.jl:553
during initialization of module Peridynamics

Loading failed after 27.61s

ERROR: LoadError: failed process: Process(`/opt/julia/bin/julia -C native -J/opt/julia/lib/julia/sys.so -g1 --check-bounds=yes --inline=yes --pkgimages=existing -e 'using Peridynamics'`, ProcessExited(1)) [1]

Stacktrace:
 [1] pipeline_error
   @ ./process.jl:602 [inlined]
 [2] run(::Cmd; wait::Bool)
   @ Base ./process.jl:517
 [3] run(::Cmd)
   @ Base ./process.jl:514
 [4] top-level scope
   @ /PkgEval.jl/scripts/evaluate.jl:193
 [5] include(mod::Module, _path::String)
   @ Base ./Base.jl:309
 [6] exec_options(opts::Base.JLOptions)
   @ Base ./client.jl:320
 [7] _start()
   @ Base ./client.jl:553
in expression starting at /PkgEval.jl/scripts/evaluate.jl:184

PkgEval failed after 203.95s: there were unidentified errors