Package evaluation of NTNk on Julia 1.13.0-DEV.853 (3e868b27cf*) started at 2025-07-17T13:10:41.223 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 8.79s ################################################################################ # Installation # Installing NTNk... Resolving package versions... Installed Conda ──── v1.10.2 Installed PyCall ─── v1.96.4 Installed IJulia ─── v1.29.0 Installed PlotlyJS ─ v0.18.16 Installed WebIO ──── v0.8.21 Updating `~/.julia/environments/v1.13/Project.toml` [530fd2b5] + NTNk v1.0.0 Updating `~/.julia/environments/v1.13/Manifest.toml` [47edcb42] + ADTypes v1.15.0 [a4c015fc] + ANSIColoredPrinters v0.0.1 [621f4979] + AbstractFFTs v1.5.0 [1520ce14] + AbstractTrees v0.4.5 [79e6a3ab] + Adapt v4.3.0 [a0f608ac] + AffineInvariantMCMC v1.3.0 [66dad0bd] + AliasTables v1.1.3 [fd9e7046] + Anasol v1.0.1 [dce04be8] + ArgCheck v2.5.0 [ec485272] + ArnoldiMethod v0.4.0 [7d9fca2a] + Arpack v0.5.4 [4fba245c] + ArrayInterface v7.19.0 [bf4720bc] + AssetRegistry v0.1.0 [13072b0f] + AxisAlgorithms v1.1.0 [39de3d68] + AxisArrays v0.4.7 [7f9c7709] + BIGUQ v1.1.1 [6e4b80f9] + BenchmarkTools v1.6.0 [d1d4a3ce] + BitFlags v0.1.9 [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 [a134a8b2] + BlackBoxOptim v0.6.3 [ad839575] + Blink v0.12.9 [a74b3585] + Blosc v0.7.3 [e1450e63] + BufferedStreams v1.2.2 [fa961155] + CEnum v0.5.0 [2a0fbf3d] + CPUSummary v0.2.6 [a9c8d775] + CPUTime v1.0.0 [336ed68f] + CSV v0.10.15 [159f3aea] + Cairo v1.1.1 [6c57e878] + CanDecomp v1.1.2 [aafaddc9] + CatIndices v0.2.2 [324d7699] + CategoricalArrays v0.10.8 [d360d2e6] + ChainRulesCore v1.25.2 [fb6a15b2] + CloseOpenIntervals v0.1.13 [aaaa29a8] + Clustering v0.15.8 [523fee87] + CodecBzip2 v0.8.5 [6309b1aa] + CodecInflate64 v0.1.3 [944b1d66] + CodecZlib v0.7.8 [35d6a980] + ColorSchemes v3.30.0 [3da002f7] + ColorTypes v0.12.1 [c3611d14] + ColorVectorSpace v0.11.0 [5ae59095] + Colors v0.13.1 [bbf7d656] + CommonSubexpressions v0.3.1 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.17.0 [a81c6b42] + Compose v0.9.6 [ed09eef8] + ComputationalResources v0.3.2 [f0e56b4a] + ConcurrentUtilities v2.5.0 [8f4d0f93] + Conda v1.10.2 [187b0558] + ConstructionBase v1.6.0 [d38c429a] + Contour v0.6.3 [150eb455] + CoordinateTransformations v0.6.4 [7ad07ef1] + CoupledFields v0.3.0 [adafc99b] + CpuId v0.3.1 [a8cc5b0e] + Crayons v4.1.1 [dc8bdbbb] + CustomUnitRanges v1.0.2 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.7.0 [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [e7dc6d0d] + DataValues v0.4.13 [8bb1440f] + DelimitedFiles v1.9.1 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [a0c0ee7d] + DifferentiationInterface v0.7.3 [b4f34e82] + Distances v0.10.12 [aaf54ef3] + DistributedArrays v0.6.7 [31c24e10] + Distributions v0.25.120 [ffbed154] + DocStringExtensions v0.9.5 [e1f3b4f0] + DocumentFunction v1.4.0 [e30172f5] + Documenter v1.14.1 [497a8b3b] + DoubleFloats v1.4.3 [4e289a0a] + EnumX v1.0.5 [460bff9d] + ExceptionUnwrapping v0.1.11 [8f5d6c58] + EzXML v1.2.1 [4f61f5a4] + FFTViews v0.3.2 [7a1cc6ca] + FFTW v1.9.0 [5789e2e9] + FileIO v1.17.0 ⌅ [8fc22ac5] + FilePaths v0.8.3 [48062228] + FilePathsBase v0.9.24 [1a297f60] + FillArrays v1.13.0 [6a86dc24] + FiniteDiff v2.27.0 [53c48c17] + FixedPointNumbers v0.8.5 [186bb1d3] + Fontconfig v0.4.1 ⌅ [f6369f11] + ForwardDiff v0.10.38 [de31a74c] + FunctionalCollections v0.5.0 [c91e804a] + Gadfly v1.4.1 [14197337] + GenericLinearAlgebra v0.3.17 [0ef565a4] + Geodesy v1.1.0 [acd30bff] + GeostatInversion v1.2.0 [d7ba0133] + Git v1.4.0 [a2bd30eb] + Graphics v1.1.3 [86223c79] + Graphs v1.13.0 [42e2da0e] + Grisu v1.0.2 [c8ec2601] + H5Zblosc v0.1.2 [f67ccb44] + HDF5 v0.17.2 [cd3eb016] + HTTP v1.10.17 [076d061b] + HashArrayMappedTries v0.2.0 [a1b4810d] + Hexagons v0.2.0 [9fb69e20] + Hiccup v0.2.2 [2c695a8d] + HistogramThresholding v0.3.1 [3e5b6fbb] + HostCPUFeatures v0.1.17 [34004b35] + HypergeometricFunctions v0.3.28 [7073ff75] + IJulia v1.29.0 [b5f81e59] + IOCapture v0.2.5 [615f187c] + IfElse v0.1.1 [2803e5a7] + ImageAxes v0.6.12 [c817782e] + ImageBase v0.1.7 [cbc4b850] + ImageBinarization v0.3.1 [f332f351] + ImageContrastAdjustment v0.3.12 [a09fc81d] + ImageCore v0.10.5 [89d5987c] + ImageCorners v0.1.3 [51556ac3] + ImageDistances v0.2.17 [6a3955dd] + ImageFiltering v0.7.10 [82e4d734] + ImageIO v0.6.9 [6218d12a] + ImageMagick v1.4.2 [bc367c6b] + ImageMetadata v0.9.10 [787d08f9] + ImageMorphology v0.4.6 [2996bd0c] + ImageQualityIndexes v0.3.7 [80713f31] + ImageSegmentation v1.9.0 [4e3cecfd] + ImageShow v0.3.8 [02fcd773] + ImageTransformations v0.10.2 [916415d5] + Images v0.26.2 [9b13fd28] + IndirectArrays v1.0.0 [d25df0c9] + Inflate v0.1.5 [842dd82b] + InlineStrings v1.4.4 [0c81fc1b] + InputBuffers v1.1.1 [18e54dd8] + IntegerMathUtils v0.1.3 [1d092043] + IntegralArrays v0.1.6 ⌅ [a98d9a8b] + Interpolations v0.15.1 [8197267c] + IntervalSets v0.7.11 [41ab1584] + InvertedIndices v1.3.1 [b6b21f68] + Ipopt v1.10.6 [92d709cd] + IrrationalConstants v0.2.4 [c8e1da08] + IterTools v1.10.0 [1c8ee90f] + IterableTables v1.0.0 [42fd0dbc] + IterativeSolvers v0.9.4 [82899510] + IteratorInterfaceExtensions v1.0.0 [4138dd39] + JLD v0.13.5 [033835bb] + JLD2 v0.5.15 [692b3bcd] + JLLWrappers v1.7.0 [97c1335a] + JSExpr v0.5.4 [682c06a0] + JSON v0.21.4 [0f8b85d8] + JSON3 v1.14.3 [7d188eb4] + JSONSchema v1.4.1 [b835a17e] + JpegTurbo v0.1.6 [4076af6c] + JuMP v1.26.0 [5ab0869b] + KernelDensity v0.6.10 [6133562b] + Kriging v1.3.0 [2d691ee1] + LIBLINEAR v0.7.1 [8ac3fa9e] + LRUCache v1.6.2 [b964fa9f] + LaTeXStrings v1.4.0 [10f19ff3] + LayoutPointers v0.1.17 [0e77f7df] + LazilyInitializedFields v1.3.0 [50d2b5c4] + Lazy v0.15.1 ⌅ [7031d0ef] + LazyGrids v0.5.0 [8cdb02fc] + LazyModules v0.3.1 [9c8b4983] + LightXML v0.9.2 [d3d80556] + LineSearches v7.4.0 [bae27b42] + LoadTensorDecompositions v1.1.0 [4345ca2d] + Loess v0.6.4 [2ab3a3ac] + LogExpFunctions v0.3.29 [e6f89c97] + LoggingExtras v1.1.0 [bdcacae8] + LoopVectorization v0.12.172 [2fda8390] + LsqFit v0.15.1 [3da0fdf6] + MPIPreferences v0.1.11 [1914dd2f] + MacroTools v0.5.16 [d6bdc55b] + Mads v1.6.5 [d125e4d3] + ManualMemory v0.1.8 [dbb5928d] + MappedArrays v0.4.2 [d0879d2d] + MarkdownAST v0.1.2 [b8f27783] + MathOptInterface v1.42.0 [739be429] + MbedTLS v1.1.9 [442fdcdd] + Measures v0.3.2 [626554b9] + MetaGraphs v0.8.0 [b1909ce5] + MetaProgTools v1.0.0 [e1d29d7a] + Missings v1.2.0 [e94cdb99] + MosaicViews v0.3.4 [6f286f6a] + MultivariateStats v0.10.3 [ffc61752] + Mustache v1.0.21 [d8a4904e] + MutableArithmetics v1.6.4 [a975b10e] + Mux v1.0.2 [d41bc354] + NLSolversBase v7.10.0 [76087f3c] + NLopt v1.2.0 [6ef6ca0d] + NMF v1.0.3 [e40cd9e2] + NMFk v1.4.15 [1226e131] + NTFk v1.3.0 [530fd2b5] + NTNk v1.0.0 [77ba4419] + NaNMath v1.1.3 [b8a86587] + NearestNeighbors v0.4.22 [f09324ee] + Netpbm v1.1.1 [2bd173c7] + NodeJS v2.0.0 [b7351bd1] + NonNegLeastSquares v0.4.1 [4d1e1d77] + Nullables v1.0.0 [510215fc] + Observables v0.5.5 [6fe1bfb0] + OffsetArrays v1.17.0 [52e1d378] + OpenEXR v0.3.3 [4d8831e6] + OpenSSL v1.5.0 [429524aa] + Optim v1.13.2 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.35 [f57f5aa1] + PNGFiles v0.4.4 [5432bcbf] + PaddedViews v0.5.12 [d96e819e] + Parameters v0.12.3 [69de0a69] + Parsers v2.8.3 [fa939f87] + Pidfile v1.3.0 [eebad327] + PkgVersion 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+ Rotations v1.7.1 [fdea26ae] + SIMD v3.7.1 [94e857df] + SIMDTypes v0.1.0 [476501e8] + SLEEFPirates v0.6.43 [22bb73d7] + SVR v1.4.1 [7e506255] + ScopedValues v1.4.0 [91c51154] + SentinelArrays v1.4.8 [efcf1570] + Setfield v1.1.2 [992d4aef] + Showoff v1.0.3 [777ac1f9] + SimpleBufferStream v1.2.0 [699a6c99] + SimpleTraits v0.9.4 [47aef6b3] + SimpleWeightedGraphs v1.5.0 [45858cf5] + Sixel v0.1.5 [b85f4697] + SoftGlobalScope v1.1.0 [a2af1166] + SortingAlgorithms v1.2.1 [d4ead438] + SpatialIndexing v0.1.6 [276daf66] + SpecialFunctions v2.5.1 [cae243ae] + StackViews v0.1.2 [aedffcd0] + Static v1.2.0 [0d7ed370] + StaticArrayInterface v1.8.0 [90137ffa] + StaticArrays v1.9.14 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 [2913bbd2] + StatsBase v0.34.5 [4c63d2b9] + StatsFuns v1.5.0 ⌅ [5e0ebb24] + Strided v1.2.3 [69024149] + StringEncodings v0.3.7 [892a3eda] + StringManipulation v0.4.1 [856f2bd8] + StructTypes v1.11.0 [fd094767] + Suppressor 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LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.13.0 [de0858da] + Printf v1.11.0 [9abbd945] + Profile v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.14.1+1 [e37daf67] + LibGit2_jll v1.9.1+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.5.20 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.5+0 [458c3c95] + OpenSSL_jll v3.5.1+0 [efcefdf7] + PCRE2_jll v10.45.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.13.1+0 [8e850ede] + nghttp2_jll v1.65.0+0 [3f19e933] + p7zip_jll v17.5.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Building Conda ───→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/b19db3927f0db4151cb86d073689f2428e524576/build.log` Building PyCall ──→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/9816a3826b0ebf49ab4926e2b18842ad8b5c8f04/build.log` Building IJulia ──→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/9e60d328aa8060368d6dadd24b644d0ebaf0c1cb/build.log` Building WebIO ───→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/0eef0765186f7452e52236fa42ca8c9b3c11c6e3/build.log` Building PlotlyJS → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/b816b0f301b074e002476159a9ada5691eebaf61/build.log` Installation completed after 89.17s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 2133.12s ################################################################################ # Testing # Testing NTNk Status `/tmp/jl_Ex0tRl/Project.toml` [e40cd9e2] NMFk v1.4.15 [1226e131] NTFk v1.3.0 [530fd2b5] NTNk v1.0.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_Ex0tRl/Manifest.toml` [47edcb42] ADTypes v1.15.0 [a4c015fc] ANSIColoredPrinters v0.0.1 [621f4979] AbstractFFTs v1.5.0 [1520ce14] AbstractTrees v0.4.5 [79e6a3ab] Adapt v4.3.0 [a0f608ac] AffineInvariantMCMC v1.3.0 [66dad0bd] AliasTables v1.1.3 [fd9e7046] Anasol v1.0.1 [dce04be8] ArgCheck v2.5.0 [ec485272] ArnoldiMethod v0.4.0 [7d9fca2a] Arpack v0.5.4 [4fba245c] ArrayInterface v7.19.0 [bf4720bc] AssetRegistry v0.1.0 [13072b0f] AxisAlgorithms v1.1.0 [39de3d68] AxisArrays v0.4.7 [7f9c7709] BIGUQ v1.1.1 [6e4b80f9] BenchmarkTools v1.6.0 [d1d4a3ce] BitFlags v0.1.9 [62783981] BitTwiddlingConvenienceFunctions v0.1.6 [a134a8b2] BlackBoxOptim v0.6.3 [ad839575] Blink v0.12.9 [a74b3585] Blosc v0.7.3 [e1450e63] BufferedStreams v1.2.2 [fa961155] CEnum v0.5.0 [2a0fbf3d] CPUSummary v0.2.6 [a9c8d775] CPUTime v1.0.0 [336ed68f] CSV v0.10.15 [159f3aea] Cairo v1.1.1 [6c57e878] CanDecomp v1.1.2 [aafaddc9] CatIndices v0.2.2 [324d7699] CategoricalArrays v0.10.8 [d360d2e6] ChainRulesCore v1.25.2 [fb6a15b2] CloseOpenIntervals v0.1.13 [aaaa29a8] Clustering v0.15.8 [523fee87] CodecBzip2 v0.8.5 [6309b1aa] CodecInflate64 v0.1.3 [944b1d66] CodecZlib v0.7.8 [35d6a980] ColorSchemes v3.30.0 [3da002f7] ColorTypes v0.12.1 [c3611d14] ColorVectorSpace v0.11.0 [5ae59095] Colors v0.13.1 [bbf7d656] CommonSubexpressions v0.3.1 [f70d9fcc] CommonWorldInvalidations v1.0.0 [34da2185] Compat v4.17.0 [a81c6b42] Compose v0.9.6 [ed09eef8] ComputationalResources v0.3.2 [f0e56b4a] ConcurrentUtilities v2.5.0 [8f4d0f93] Conda v1.10.2 [187b0558] ConstructionBase v1.6.0 [d38c429a] Contour v0.6.3 [150eb455] CoordinateTransformations v0.6.4 [7ad07ef1] CoupledFields v0.3.0 [adafc99b] CpuId v0.3.1 [a8cc5b0e] 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[56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.13.0 [de0858da] Printf v1.11.0 [9abbd945] Profile v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [1a1011a3] SharedArrays v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.12.0 [f489334b] StyledStrings v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.14.1+1 [e37daf67] LibGit2_jll v1.9.1+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.5.20 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.5+0 [458c3c95] OpenSSL_jll v3.5.1+0 [efcefdf7] PCRE2_jll v10.45.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.13.1+0 [8e850ede] nghttp2_jll v1.65.0+0 [3f19e933] p7zip_jll v17.5.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... WARNING: Method definition PNG(Any...) in module Compose at /home/pkgeval/.julia/packages/Compose/eWKZh/src/Compose.jl:138 overwritten at /home/pkgeval/.julia/packages/Compose/eWKZh/src/cairo_backends.jl:208. WARNING: Method definition kwcall(NamedTuple{names, T} where T<:Tuple where names, typeof(Compose.PNG), Any...) in module Compose at /home/pkgeval/.julia/packages/Compose/eWKZh/src/Compose.jl:138 overwritten at /home/pkgeval/.julia/packages/Compose/eWKZh/src/cairo_backends.jl:208. WARNING: Method definition PDF(Any...) in module Compose at /home/pkgeval/.julia/packages/Compose/eWKZh/src/Compose.jl:138 overwritten at /home/pkgeval/.julia/packages/Compose/eWKZh/src/cairo_backends.jl:208. WARNING: Method definition kwcall(NamedTuple{names, T} where T<:Tuple where names, typeof(Compose.PDF), Any...) in module Compose at /home/pkgeval/.julia/packages/Compose/eWKZh/src/Compose.jl:138 overwritten at /home/pkgeval/.julia/packages/Compose/eWKZh/src/cairo_backends.jl:208. WARNING: Method definition PS(Any...) in module Compose at /home/pkgeval/.julia/packages/Compose/eWKZh/src/Compose.jl:138 overwritten at /home/pkgeval/.julia/packages/Compose/eWKZh/src/cairo_backends.jl:208. WARNING: Method definition kwcall(NamedTuple{names, T} where T<:Tuple where names, typeof(Compose.PS), Any...) in module Compose at /home/pkgeval/.julia/packages/Compose/eWKZh/src/Compose.jl:138 overwritten at /home/pkgeval/.julia/packages/Compose/eWKZh/src/cairo_backends.jl:208. WARNING: Method definition max_text_extents(AbstractString, Measures.Measure, AbstractString...) in module Compose at /home/pkgeval/.julia/packages/Compose/eWKZh/src/fontfallback.jl:83 overwritten at /home/pkgeval/.julia/packages/Compose/eWKZh/src/pango.jl:119. WARNING: Method definition text_extents(AbstractString, Measures.Measure, AbstractString...) in module Compose at /home/pkgeval/.julia/packages/Compose/eWKZh/src/fontfallback.jl:114 overwritten at /home/pkgeval/.julia/packages/Compose/eWKZh/src/pango.jl:131. WARNING: Method definition pango_to_svg(AbstractString) in module Compose at /home/pkgeval/.julia/packages/Compose/eWKZh/src/fontfallback.jl:147 overwritten at /home/pkgeval/.julia/packages/Compose/eWKZh/src/pango.jl:319. [ Info: Installing matplotlib via the Conda matplotlib package... [ Info: Running `conda install -q -y matplotlib` in root environment Channels: - conda-forge Platform: linux-64 Collecting package metadata (repodata.json): ...working... done Solving environment: ...working... done ## Package Plan ## environment location: /home/pkgeval/.julia/conda/3/x86_64 added / updated specs: - matplotlib The following packages will be downloaded: package | build ---------------------------|----------------- alsa-lib-1.2.14 | hb9d3cd8_0 553 KB conda-forge brotli-1.1.0 | hb9d3cd8_2 19 KB conda-forge brotli-bin-1.1.0 | hb9d3cd8_2 18 KB conda-forge cairo-1.18.4 | h3394656_0 955 KB conda-forge contourpy-1.3.2 | py312h68727a3_0 270 KB conda-forge cycler-0.12.1 | pyhd8ed1ab_1 13 KB conda-forge cyrus-sasl-2.1.28 | hd9c7081_0 205 KB conda-forge dbus-1.16.2 | h3c4dab8_0 428 KB conda-forge double-conversion-3.3.1 | h5888daf_0 68 KB conda-forge font-ttf-dejavu-sans-mono-2.37| hab24e00_0 388 KB conda-forge font-ttf-inconsolata-3.000 | h77eed37_0 94 KB conda-forge font-ttf-source-code-pro-2.038| h77eed37_0 684 KB conda-forge font-ttf-ubuntu-0.83 | h77eed37_3 1.5 MB conda-forge fontconfig-2.15.0 | h7e30c49_1 259 KB conda-forge fonts-conda-ecosystem-1 | 0 4 KB conda-forge fonts-conda-forge-1 | 0 4 KB conda-forge fonttools-4.59.0 | py312h8a5da7c_0 2.7 MB conda-forge freetype-2.13.3 | ha770c72_1 168 KB conda-forge graphite2-1.3.14 | h5888daf_0 96 KB conda-forge harfbuzz-11.2.1 | h3beb420_0 1.7 MB conda-forge kiwisolver-1.4.8 | py312h68727a3_1 70 KB conda-forge lcms2-2.17 | h717163a_0 242 KB conda-forge lerc-4.0.0 | h0aef613_1 258 KB conda-forge libbrotlicommon-1.1.0 | hb9d3cd8_2 67 KB conda-forge libbrotlidec-1.1.0 | hb9d3cd8_2 32 KB conda-forge libbrotlienc-1.1.0 | hb9d3cd8_2 275 KB conda-forge libclang-cpp20.1-20.1.8 |default_hddf928d_0 20.3 MB conda-forge libclang13-20.1.8 |default_ha444ac7_0 11.8 MB conda-forge libcups-2.3.3 | hb8b1518_5 4.3 MB conda-forge libdeflate-1.24 | h86f0d12_0 71 KB conda-forge libdrm-2.4.125 | hb9d3cd8_0 240 KB conda-forge libegl-1.7.0 | ha4b6fd6_2 44 KB conda-forge libfreetype-2.13.3 | ha770c72_1 8 KB conda-forge libfreetype6-2.13.3 | h48d6fc4_1 371 KB conda-forge libgl-1.7.0 | ha4b6fd6_2 132 KB conda-forge libglib-2.84.2 | h3618099_0 3.8 MB conda-forge libglvnd-1.7.0 | ha4b6fd6_2 129 KB conda-forge libglx-1.7.0 | ha4b6fd6_2 74 KB conda-forge libjpeg-turbo-3.1.0 | hb9d3cd8_0 614 KB conda-forge libllvm20-20.1.8 | hecd9e04_0 41.9 MB conda-forge libntlm-1.8 | hb9d3cd8_0 33 KB conda-forge libopengl-1.7.0 | ha4b6fd6_2 50 KB conda-forge libpciaccess-0.18 | hb9d3cd8_0 28 KB conda-forge libpng-1.6.50 | h943b412_0 282 KB conda-forge libpq-17.5 | h27ae623_0 2.6 MB conda-forge libtiff-4.7.0 | hf01ce69_5 420 KB conda-forge libwebp-base-1.6.0 | hd42ef1d_0 419 KB conda-forge libxcb-1.17.0 | h8a09558_0 387 KB conda-forge libxkbcommon-1.10.0 | h65c71a3_0 691 KB conda-forge libxslt-1.1.39 | h76b75d6_0 248 KB conda-forge matplotlib-3.10.3 | py312h7900ff3_0 17 KB conda-forge matplotlib-base-3.10.3 | py312hd3ec401_0 7.8 MB conda-forge munkres-1.1.4 | pyhd8ed1ab_1 15 KB conda-forge openjpeg-2.5.3 | h5fbd93e_0 335 KB conda-forge openldap-2.6.10 | he970967_0 762 KB conda-forge pcre2-10.45 | hc749103_0 1.1 MB conda-forge pillow-11.3.0 | py312h80c1187_0 41.0 MB conda-forge pixman-0.46.2 | h29eaf8c_0 393 KB conda-forge pthread-stubs-0.4 | hb9d3cd8_1002 8 KB conda-forge pyparsing-3.2.3 | pyhd8ed1ab_1 94 KB conda-forge pyside6-6.9.0 | py312h91f0f75_0 9.7 MB conda-forge python-dateutil-2.9.0.post0| pyhe01879c_2 228 KB conda-forge qhull-2020.2 | h434a139_5 540 KB conda-forge qt6-main-6.9.0 | h0384650_3 49.6 MB conda-forge six-1.17.0 | pyhd8ed1ab_0 16 KB conda-forge tornado-6.5.1 | py312h66e93f0_0 831 KB conda-forge unicodedata2-16.0.0 | py312h66e93f0_0 395 KB conda-forge wayland-1.24.0 | h3e06ad9_0 323 KB conda-forge xcb-util-0.4.1 | h4f16b4b_2 20 KB conda-forge xcb-util-cursor-0.1.5 | hb9d3cd8_0 20 KB conda-forge xcb-util-image-0.4.0 | hb711507_2 24 KB conda-forge xcb-util-keysyms-0.4.1 | hb711507_0 14 KB conda-forge xcb-util-renderutil-0.3.10 | hb711507_0 17 KB conda-forge xcb-util-wm-0.4.2 | hb711507_0 50 KB conda-forge xkeyboard-config-2.45 | hb9d3cd8_0 383 KB conda-forge xorg-libice-1.1.2 | hb9d3cd8_0 57 KB conda-forge xorg-libsm-1.2.6 | he73a12e_0 27 KB conda-forge xorg-libx11-1.8.12 | h4f16b4b_0 816 KB conda-forge xorg-libxau-1.0.12 | hb9d3cd8_0 14 KB conda-forge xorg-libxcomposite-0.4.6 | hb9d3cd8_2 13 KB conda-forge xorg-libxcursor-1.2.3 | hb9d3cd8_0 32 KB conda-forge xorg-libxdamage-1.1.6 | hb9d3cd8_0 13 KB conda-forge xorg-libxdmcp-1.1.5 | hb9d3cd8_0 19 KB conda-forge xorg-libxext-1.3.6 | hb9d3cd8_0 49 KB conda-forge xorg-libxfixes-6.0.1 | hb9d3cd8_0 19 KB conda-forge xorg-libxi-1.8.2 | hb9d3cd8_0 46 KB conda-forge xorg-libxrandr-1.5.4 | hb9d3cd8_0 29 KB conda-forge xorg-libxrender-0.9.12 | hb9d3cd8_0 32 KB conda-forge xorg-libxtst-1.2.5 | hb9d3cd8_3 32 KB conda-forge xorg-libxxf86vm-1.1.6 | hb9d3cd8_0 17 KB conda-forge ------------------------------------------------------------ Total: 214.5 MB The following NEW packages will be INSTALLED: alsa-lib conda-forge/linux-64::alsa-lib-1.2.14-hb9d3cd8_0 brotli conda-forge/linux-64::brotli-1.1.0-hb9d3cd8_2 brotli-bin conda-forge/linux-64::brotli-bin-1.1.0-hb9d3cd8_2 cairo conda-forge/linux-64::cairo-1.18.4-h3394656_0 contourpy conda-forge/linux-64::contourpy-1.3.2-py312h68727a3_0 cycler conda-forge/noarch::cycler-0.12.1-pyhd8ed1ab_1 cyrus-sasl conda-forge/linux-64::cyrus-sasl-2.1.28-hd9c7081_0 dbus conda-forge/linux-64::dbus-1.16.2-h3c4dab8_0 double-conversion conda-forge/linux-64::double-conversion-3.3.1-h5888daf_0 font-ttf-dejavu-s~ conda-forge/noarch::font-ttf-dejavu-sans-mono-2.37-hab24e00_0 font-ttf-inconsol~ conda-forge/noarch::font-ttf-inconsolata-3.000-h77eed37_0 font-ttf-source-c~ conda-forge/noarch::font-ttf-source-code-pro-2.038-h77eed37_0 font-ttf-ubuntu conda-forge/noarch::font-ttf-ubuntu-0.83-h77eed37_3 fontconfig conda-forge/linux-64::fontconfig-2.15.0-h7e30c49_1 fonts-conda-ecosy~ conda-forge/noarch::fonts-conda-ecosystem-1-0 fonts-conda-forge conda-forge/noarch::fonts-conda-forge-1-0 fonttools conda-forge/linux-64::fonttools-4.59.0-py312h8a5da7c_0 freetype conda-forge/linux-64::freetype-2.13.3-ha770c72_1 graphite2 conda-forge/linux-64::graphite2-1.3.14-h5888daf_0 harfbuzz conda-forge/linux-64::harfbuzz-11.2.1-h3beb420_0 kiwisolver conda-forge/linux-64::kiwisolver-1.4.8-py312h68727a3_1 lcms2 conda-forge/linux-64::lcms2-2.17-h717163a_0 lerc conda-forge/linux-64::lerc-4.0.0-h0aef613_1 libbrotlicommon conda-forge/linux-64::libbrotlicommon-1.1.0-hb9d3cd8_2 libbrotlidec conda-forge/linux-64::libbrotlidec-1.1.0-hb9d3cd8_2 libbrotlienc conda-forge/linux-64::libbrotlienc-1.1.0-hb9d3cd8_2 libclang-cpp20.1 conda-forge/linux-64::libclang-cpp20.1-20.1.8-default_hddf928d_0 libclang13 conda-forge/linux-64::libclang13-20.1.8-default_ha444ac7_0 libcups conda-forge/linux-64::libcups-2.3.3-hb8b1518_5 libdeflate conda-forge/linux-64::libdeflate-1.24-h86f0d12_0 libdrm conda-forge/linux-64::libdrm-2.4.125-hb9d3cd8_0 libegl conda-forge/linux-64::libegl-1.7.0-ha4b6fd6_2 libfreetype conda-forge/linux-64::libfreetype-2.13.3-ha770c72_1 libfreetype6 conda-forge/linux-64::libfreetype6-2.13.3-h48d6fc4_1 libgl conda-forge/linux-64::libgl-1.7.0-ha4b6fd6_2 libglib conda-forge/linux-64::libglib-2.84.2-h3618099_0 libglvnd conda-forge/linux-64::libglvnd-1.7.0-ha4b6fd6_2 libglx conda-forge/linux-64::libglx-1.7.0-ha4b6fd6_2 libjpeg-turbo conda-forge/linux-64::libjpeg-turbo-3.1.0-hb9d3cd8_0 libllvm20 conda-forge/linux-64::libllvm20-20.1.8-hecd9e04_0 libntlm conda-forge/linux-64::libntlm-1.8-hb9d3cd8_0 libopengl conda-forge/linux-64::libopengl-1.7.0-ha4b6fd6_2 libpciaccess conda-forge/linux-64::libpciaccess-0.18-hb9d3cd8_0 libpng conda-forge/linux-64::libpng-1.6.50-h943b412_0 libpq conda-forge/linux-64::libpq-17.5-h27ae623_0 libtiff conda-forge/linux-64::libtiff-4.7.0-hf01ce69_5 libwebp-base conda-forge/linux-64::libwebp-base-1.6.0-hd42ef1d_0 libxcb conda-forge/linux-64::libxcb-1.17.0-h8a09558_0 libxkbcommon conda-forge/linux-64::libxkbcommon-1.10.0-h65c71a3_0 libxslt conda-forge/linux-64::libxslt-1.1.39-h76b75d6_0 matplotlib conda-forge/linux-64::matplotlib-3.10.3-py312h7900ff3_0 matplotlib-base conda-forge/linux-64::matplotlib-base-3.10.3-py312hd3ec401_0 munkres conda-forge/noarch::munkres-1.1.4-pyhd8ed1ab_1 openjpeg conda-forge/linux-64::openjpeg-2.5.3-h5fbd93e_0 openldap conda-forge/linux-64::openldap-2.6.10-he970967_0 pcre2 conda-forge/linux-64::pcre2-10.45-hc749103_0 pillow conda-forge/linux-64::pillow-11.3.0-py312h80c1187_0 pixman conda-forge/linux-64::pixman-0.46.2-h29eaf8c_0 pthread-stubs conda-forge/linux-64::pthread-stubs-0.4-hb9d3cd8_1002 pyparsing conda-forge/noarch::pyparsing-3.2.3-pyhd8ed1ab_1 pyside6 conda-forge/linux-64::pyside6-6.9.0-py312h91f0f75_0 python-dateutil conda-forge/noarch::python-dateutil-2.9.0.post0-pyhe01879c_2 qhull conda-forge/linux-64::qhull-2020.2-h434a139_5 qt6-main conda-forge/linux-64::qt6-main-6.9.0-h0384650_3 six conda-forge/noarch::six-1.17.0-pyhd8ed1ab_0 tornado conda-forge/linux-64::tornado-6.5.1-py312h66e93f0_0 unicodedata2 conda-forge/linux-64::unicodedata2-16.0.0-py312h66e93f0_0 wayland conda-forge/linux-64::wayland-1.24.0-h3e06ad9_0 xcb-util conda-forge/linux-64::xcb-util-0.4.1-h4f16b4b_2 xcb-util-cursor conda-forge/linux-64::xcb-util-cursor-0.1.5-hb9d3cd8_0 xcb-util-image conda-forge/linux-64::xcb-util-image-0.4.0-hb711507_2 xcb-util-keysyms conda-forge/linux-64::xcb-util-keysyms-0.4.1-hb711507_0 xcb-util-renderut~ conda-forge/linux-64::xcb-util-renderutil-0.3.10-hb711507_0 xcb-util-wm conda-forge/linux-64::xcb-util-wm-0.4.2-hb711507_0 xkeyboard-config conda-forge/linux-64::xkeyboard-config-2.45-hb9d3cd8_0 xorg-libice conda-forge/linux-64::xorg-libice-1.1.2-hb9d3cd8_0 xorg-libsm conda-forge/linux-64::xorg-libsm-1.2.6-he73a12e_0 xorg-libx11 conda-forge/linux-64::xorg-libx11-1.8.12-h4f16b4b_0 xorg-libxau conda-forge/linux-64::xorg-libxau-1.0.12-hb9d3cd8_0 xorg-libxcomposite conda-forge/linux-64::xorg-libxcomposite-0.4.6-hb9d3cd8_2 xorg-libxcursor conda-forge/linux-64::xorg-libxcursor-1.2.3-hb9d3cd8_0 xorg-libxdamage conda-forge/linux-64::xorg-libxdamage-1.1.6-hb9d3cd8_0 xorg-libxdmcp conda-forge/linux-64::xorg-libxdmcp-1.1.5-hb9d3cd8_0 xorg-libxext conda-forge/linux-64::xorg-libxext-1.3.6-hb9d3cd8_0 xorg-libxfixes conda-forge/linux-64::xorg-libxfixes-6.0.1-hb9d3cd8_0 xorg-libxi conda-forge/linux-64::xorg-libxi-1.8.2-hb9d3cd8_0 xorg-libxrandr conda-forge/linux-64::xorg-libxrandr-1.5.4-hb9d3cd8_0 xorg-libxrender conda-forge/linux-64::xorg-libxrender-0.9.12-hb9d3cd8_0 xorg-libxtst conda-forge/linux-64::xorg-libxtst-1.2.5-hb9d3cd8_3 xorg-libxxf86vm conda-forge/linux-64::xorg-libxxf86vm-1.1.6-hb9d3cd8_0 Preparing transaction: ...working... done Verifying transaction: ...working... done Executing transaction: ...working... done ┌ Warning: TensorLy is not available └ @ NTFk ~/.julia/packages/NTFk/rW1dh/src/NTFkTensorly.jl:10 [ Info: Hierarchical Tucker Level 1 [ Info: TensorDecompositions Tucker analysis for a series of 1 core sizes ... [ Info: Clustering Dimension: 1 [ Info: TensorDecompositions Sparse Nonnegative Tucker analysis using spnntucker ... [ Info: Core size (20, 20, 20)... [ Info: Clustering Dimension: 1 [ Info: Random seed: 12940 [ Info: Tensor size: (20, 20, 20) [ Info: D1 components 20 [ Info: D2 components 20 [ Info: D3 components 20 [ Info: Error: 2.4246605205409315e-15 [ Info: Vector Norm: 1.2530726448435922e-13 [ Info: HOSVD core rank: (20, 20, 20) ┌ Warning: `Progress(n::Integer, desc::AbstractString, offset::Integer = 0; kwargs...)` is deprecated, use `Progress(n; desc = desc, offset = offset, kwargs...)` instead. │ caller = ip:0x0 └ @ Core :-1 Alternating proximal gradient iterations 0%| | ETA: 0:11:34 Alternating proximal gradient iterations 0%| | ETA: 0:08:48 Alternating proximal gradient iterations 9%|▉ | ETA: 0:00:30 Alternating proximal gradient iterations 17%|█▊ | ETA: 0:00:14 Alternating proximal gradient iterations 25%|██▌ | ETA: 0:00:09 Alternating proximal gradient iterations 33%|███▎ | ETA: 0:00:07 Alternating proximal gradient iterations 40%|████ | ETA: 0:00:05 Alternating proximal gradient iterations 48%|████▊ | ETA: 0:00:04 Alternating proximal gradient iterations 55%|█████▌ | ETA: 0:00:03 Alternating proximal gradient iterations 63%|██████▎ | ETA: 0:00:02 Alternating proximal gradient iterations 70%|███████ | ETA: 0:00:02 Alternating proximal gradient iterations 78%|███████▊ | ETA: 0:00:01 Alternating proximal gradient iterations 86%|████████▌ | ETA: 0:00:01 Alternating proximal gradient iterations 93%|█████████▍| ETA: 0:00:00 Maximal number of iterations reached, might be not an optimal solution Alternating proximal gradient iterations 100%|██████████| Time: 0:00:04 39.430207 seconds (23.75 M allocations: 3.327 GiB, 4.38% gc time, 93.28% compilation time: <1% of which was recompilation) 1: relative residual 0.0542660579635013 (20, 20, 20): relative residual 0.0542660579635013 worst tensor correlations [0.3174801387162768, 0.20959461391704937, 0.41411429685346485] rank (20, 20, 20) silhouette NaN [ Info: Decompositions (clustering dimension: 1) 1 - (20, 20, 20): residual 0.0542660579635013 worst tensor correlations [0.3174801387162768, 0.20959461391704937, 0.41411429685346485] rank (20, 20, 20) silhouette NaN [ Info: Estimated true core size based on the reconstruction: (20, 20, 20) [ Info: Hierarchical Tucker Level 1 core size: (20, 20, 20) [ Info: Hierarchical Tucker Level 2 [ Info: TensorDecompositions Tucker analysis for a series of 1 core sizes ... [ Info: Clustering Dimension: 1 [ Info: TensorDecompositions Sparse Nonnegative Tucker analysis using spnntucker ... [ Info: Core size (20, 20, 20)... [ Info: Clustering Dimension: 1 [ Info: Random seed: 18833 [ Info: Tensor size: (20, 20, 20) [ Info: D1 components 20 [ Info: D2 components 20 [ Info: D3 components 20 [ Info: Error: 1.8498735699697136e-15 [ Info: Vector Norm: 5.187948185639171e-15 [ Info: HOSVD core rank: (20, 20, 20) Alternating proximal gradient iterations 1%|▏ | ETA: 0:00:09 Alternating proximal gradient iterations 100%|██████████| Time: 0:00:00 0.107731 seconds (14.90 k allocations: 27.854 MiB, 68.10% gc time, 13.70% compilation time) 1: relative residual 1.0 (20, 20, 20): relative residual 1.0 worst tensor correlations [Inf, Inf, Inf] rank (0, 0, 0) silhouette NaN [ Info: Decompositions (clustering dimension: 1) 1 - (20, 20, 20): residual 1.0 worst tensor correlations [Inf, Inf, Inf] rank (0, 0, 0) silhouette NaN [ Info: Estimated true core size based on the reconstruction: (0, 0, 0) [ Info: Hierarchical Tucker Level 2 core size: (0, 0, 0) [ Info: Hierarchical Tucker done: (0, 0, 0) reached! Test Summary: | Pass Total Time Hierarchical Tucker analysis | 2 2 1m52.1s [ Info: Tensor Train Dimension 1 [ Info: Loading of existing results is requested but `casefilename` is not specified; casefilename = "nmfk" will be used! ┌ Warning: Processed matrix size has more columns than rows (matrix size=(20, 400))! └ @ NMFk ~/.julia/packages/NMFk/EpzFN/src/NMFkExecute.jl:23 [ Info: In this case, it is recommended to use `clusterWmatrix == true`. [ Info: It is preferred to cluster the smaller of the matrices! [ Info: NMFk analysis using Simple multiplicative updates ... NMFk run with 3 signals: File ./nmfk-3-10.jld is missing; runs will be executed ... ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 801 running 1 of 1 signal (10): User defined signal 1 _ZNK4llvm13DominatorTree9dominatesEPKNS_5ValueERKNS_3UseE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN12_GLOBAL__N_18Verifier18verifyDominatesUseERN4llvm11InstructionEj at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN12_GLOBAL__N_18Verifier16visitInstructionERN4llvm11InstructionE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN12_GLOBAL__N_18Verifier13visitCallBaseERN4llvm8CallBaseE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN12_GLOBAL__N_18Verifier13visitCallInstERN4llvm8CallInstE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN12_GLOBAL__N_18Verifier6verifyERKN4llvm8FunctionE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm14verifyFunctionERKNS_8FunctionEPNS_11raw_ostreamE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) verifyLLVMIR at /source/src/pipeline.cpp:898 runOnLoop at /source/src/llvm-julia-licm.cpp:356 run at /source/src/llvm-julia-licm.cpp:381 run at /source/usr/include/llvm/IR/PassManagerInternal.h:91 _ZN4llvm11PassManagerINS_4LoopENS_15AnalysisManagerIS1_JRNS_27LoopStandardAnalysisResultsEEEEJS4_RNS_10LPMUpdaterEEE13runSinglePassIS1_St10unique_ptrINS_6detail11PassConceptIS1_S5_JS4_S7_EEESt14default_deleteISD_EEEESt8optionalINS_17PreservedAnalysesEERT_RT0_RS5_S4_S7_RNS_19PassInstrumentationE.isra.0 at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm11PassManagerINS_4LoopENS_15AnalysisManagerIS1_JRNS_27LoopStandardAnalysisResultsEEEEJS4_RNS_10LPMUpdaterEEE24runWithoutLoopNestPassesERS1_RS5_S4_S7_ at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm11PassManagerINS_4LoopENS_15AnalysisManagerIS1_JRNS_27LoopStandardAnalysisResultsEEEEJS4_RNS_10LPMUpdaterEEE3runERS1_RS5_S4_S7_ at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) run at /source/usr/include/llvm/IR/PassManagerInternal.h:91 _ZN4llvm25FunctionToLoopPassAdaptor3runERNS_8FunctionERNS_15AnalysisManagerIS1_JEEE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) run at /source/usr/include/llvm/IR/PassManagerInternal.h:91 _ZN4llvm11PassManagerINS_8FunctionENS_15AnalysisManagerIS1_JEEEJEE3runERS1_RS3_ at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) run at /source/usr/include/llvm/IR/PassManagerInternal.h:91 _ZN4llvm27ModuleToFunctionPassAdaptor3runERNS_6ModuleERNS_15AnalysisManagerIS1_JEEE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) run at /source/usr/include/llvm/IR/PassManagerInternal.h:91 _ZN4llvm11PassManagerINS_6ModuleENS_15AnalysisManagerIS1_JEEEJEE3runERS1_RS3_ at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) run at /source/src/pipeline.cpp:791 operator() at /source/src/jitlayers.cpp:1518 withModuleDo<(anonymous namespace)::sizedOptimizerT::operator()(llvm::orc::ThreadSafeModule) [with long unsigned int N = 4]:: > at /source/usr/include/llvm/ExecutionEngine/Orc/ThreadSafeModule.h:136 [inlined] operator() at /source/src/jitlayers.cpp:1479 [inlined] operator() at /source/src/jitlayers.cpp:1631 [inlined] addModule at /source/src/jitlayers.cpp:2088 jl_compile_codeinst_now at /source/src/jitlayers.cpp:683 jl_compile_codeinst_impl at /source/src/jitlayers.cpp:883 jl_compile_method_internal at /source/src/gf.c:3305 _jl_invoke at /source/src/gf.c:3785 [inlined] ijl_apply_generic at /source/src/gf.c:3993 jl_apply at /source/src/julia.h:2345 [inlined] jl_f__apply_iterate at /source/src/builtins.c:864 #execute_singlerun#335 at /home/pkgeval/.julia/packages/NMFk/EpzFN/src/NMFkExecute.jl:0 _jl_invoke at /source/src/gf.c:3793 [inlined] ijl_apply_generic at /source/src/gf.c:3993 jl_apply at /source/src/julia.h:2345 [inlined] jl_f__apply_iterate at /source/src/builtins.c:864 execute_singlerun at /home/pkgeval/.julia/packages/NMFk/EpzFN/src/NMFkExecute.jl:570 _jl_invoke at /source/src/gf.c:3793 [inlined] ijl_apply_generic at /source/src/gf.c:3993 #execute_run#307 at /home/pkgeval/.julia/packages/NMFk/EpzFN/src/NMFkExecute.jl:396 execute_run at /home/pkgeval/.julia/packages/NMFk/EpzFN/src/NMFkExecute.jl:339 [inlined] #execute#290 at /home/pkgeval/.julia/packages/NMFk/EpzFN/src/NMFkExecute.jl:165 execute at /home/pkgeval/.julia/packages/NMFk/EpzFN/src/NMFkExecute.jl:108 [inlined] execute at /home/pkgeval/.julia/packages/NMFk/EpzFN/src/NMFkExecute.jl:108 unknown function (ip: 0x766f66d10ac0) at (unknown file) _jl_invoke at /source/src/gf.c:3793 [inlined] ijl_apply_generic at /source/src/gf.c:3993 #execute#10 at /home/pkgeval/.julia/packages/NTNk/MKwk2/src/NTNkExecute.jl:45 execute at /home/pkgeval/.julia/packages/NTNk/MKwk2/src/NTNkExecute.jl:34 unknown function (ip: 0x766f66ce7466) at (unknown file) _jl_invoke at /source/src/gf.c:3793 [inlined] ijl_apply_generic at /source/src/gf.c:3993 jl_apply at /source/src/julia.h:2345 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:708 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:773 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 include_string at ./loading.jl:2848 _jl_invoke at /source/src/gf.c:3793 [inlined] ijl_apply_generic at /source/src/gf.c:3993 _include at ./loading.jl:2908 include at ./Base.jl:310 IncludeInto at ./Base.jl:311 jfptr_IncludeInto_44279.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3793 [inlined] ijl_apply_generic at /source/src/gf.c:3993 jl_apply at /source/src/julia.h:2345 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:708 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:773 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 exec_options at ./client.jl:286 _start at ./client.jl:553 jfptr__start_68801.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3793 [inlined] ijl_apply_generic at /source/src/gf.c:3993 jl_apply at /source/src/julia.h:2345 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1138 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x766fb7cae249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1192 wait_forever at ./task.jl:1129 jfptr_wait_forever_36162.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3793 [inlined] ijl_apply_generic at /source/src/gf.c:3993 jl_apply at /source/src/julia.h:2345 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.13/Profile/src/Profile.jl:1362 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x000075bde977cb50 Total snapshots: 662. Utilization: 0% ╎662 @Base/task.jl:1129 wait_forever() 661╎ 662 @Base/task.jl:1192 wait() [1] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1192 wait_forever at ./task.jl:1129 jfptr_wait_forever_36162.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3793 [inlined] ijl_apply_generic at /source/src/gf.c:3993 jl_apply at /source/src/julia.h:2345 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) Allocations: 42704664 (Pool: 42703895; Big: 769); GC: 39 [801] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/NTNk/MKwk2/test/runtests.jl:13 _ZN4llvm17LiveIntervalUnion5Query23collectInterferingVRegsEj at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZNK4llvm22DefaultEvictionAdvisor31canEvictInterferenceBasedOnCostERKNS_12LiveIntervalENS_10MCRegisterEbRNS_12EvictionCostERKNS_8SmallSetINS_8RegisterELj16ESt4lessIS8_EEE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZNK4llvm22DefaultEvictionAdvisor24tryFindEvictionCandidateERKNS_12LiveIntervalERKNS_15AllocationOrderEhRKNS_8SmallSetINS_8RegisterELj16ESt4lessIS8_EEE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm8RAGreedy8tryEvictERKNS_12LiveIntervalERNS_15AllocationOrderERNS_15SmallVectorImplINS_8RegisterEEEhRKNS_8SmallSetIS7_Lj16ESt4lessIS7_EEE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm8RAGreedy17selectOrSplitImplERKNS_12LiveIntervalERNS_15SmallVectorImplINS_8RegisterEEERNS_8SmallSetIS5_Lj16ESt4lessIS5_EEERNS_11SmallVectorISt4pairIPS2_NS_10MCRegisterEELj8EEEj at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm8RAGreedy13selectOrSplitERKNS_12LiveIntervalERNS_15SmallVectorImplINS_8RegisterEEE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm12RegAllocBase16allocatePhysRegsEv at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm8RAGreedy20runOnMachineFunctionERNS_15MachineFunctionE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm19MachineFunctionPass13runOnFunctionERNS_8FunctionE.part.0 at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm13FPPassManager13runOnFunctionERNS_8FunctionE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm13FPPassManager11runOnModuleERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm6legacy15PassManagerImpl3runERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm3orc14SimpleCompilerclERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) operator() at /source/src/jitlayers.cpp:1620 addModule at /source/src/jitlayers.cpp:2101 jl_compile_codeinst_now at /source/src/jitlayers.cpp:683 jl_compile_codeinst_impl at /source/src/jitlayers.cpp:883 jl_compile_method_internal at /source/src/gf.c:3305 _jl_invoke at /source/src/gf.c:3785 [inlined] ijl_apply_generic at /source/src/gf.c:3993 jl_apply at /source/src/julia.h:2345 [inlined] jl_f__apply_iterate at /source/src/builtins.c:864 #execute_singlerun#335 at /home/pkgeval/.julia/packages/NMFk/EpzFN/src/NMFkExecute.jl:0 _jl_invoke at /source/src/gf.c:3793 [inlined] ijl_apply_generic at /source/src/gf.c:3993 jl_apply at /source/src/julia.h:2345 [inlined] jl_f__apply_iterate at /source/src/builtins.c:864 execute_singlerun at /home/pkgeval/.julia/packages/NMFk/EpzFN/src/NMFkExecute.jl:570 _jl_invoke at /source/src/gf.c:3793 [inlined] ijl_apply_generic at /source/src/gf.c:3993 #execute_run#307 at /home/pkgeval/.julia/packages/NMFk/EpzFN/src/NMFkExecute.jl:396 execute_run at /home/pkgeval/.julia/packages/NMFk/EpzFN/src/NMFkExecute.jl:339 [inlined] #execute#290 at /home/pkgeval/.julia/packages/NMFk/EpzFN/src/NMFkExecute.jl:165 execute at /home/pkgeval/.julia/packages/NMFk/EpzFN/src/NMFkExecute.jl:108 [inlined] execute at /home/pkgeval/.julia/packages/NMFk/EpzFN/src/NMFkExecute.jl:108 unknown function (ip: 0x766f66d10ac0) at (unknown file) _jl_invoke at /source/src/gf.c:3793 [inlined] ijl_apply_generic at /source/src/gf.c:3993 #execute#10 at /home/pkgeval/.julia/packages/NTNk/MKwk2/src/NTNkExecute.jl:45 execute at /home/pkgeval/.julia/packages/NTNk/MKwk2/src/NTNkExecute.jl:34 unknown function (ip: 0x766f66ce7466) at (unknown file) _jl_invoke at /source/src/gf.c:3793 [inlined] ijl_apply_generic at /source/src/gf.c:3993 jl_apply at /source/src/julia.h:2345 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:708 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:773 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 include_string at ./loading.jl:2848 _jl_invoke at /source/src/gf.c:3793 [inlined] ijl_apply_generic at /source/src/gf.c:3993 _include at ./loading.jl:2908 include at ./Base.jl:310 IncludeInto at ./Base.jl:311 jfptr_IncludeInto_44279.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3793 [inlined] ijl_apply_generic at /source/src/gf.c:3993 jl_apply at /source/src/julia.h:2345 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:708 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:773 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 exec_options at ./client.jl:286 _start at ./client.jl:553 jfptr__start_68801.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3793 [inlined] ijl_apply_generic at /source/src/gf.c:3993 jl_apply at /source/src/julia.h:2345 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1138 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x766fb7cae249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) Allocations: 265823713 (Pool: 265820935; Big: 2778); GC: 91 PkgEval terminated after 2724.92s: test duration exceeded the time limit