Package evaluation of DiagrammaticEquations on Julia 1.12.0-DEV.2126 (3761029c84*) started at 2025-03-25T15:11:05.726 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 7.98s ################################################################################ # Installation # Installing DiagrammaticEquations... Resolving package versions... ┌ Warning: tarball content does not match git-tree-sha1 └ @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:736 Cloning [227ef7b5-1206-438b-ac65-934d6da304b8] ACSets from https://github.com/AlgebraicJulia/ACSets.jl.git Installed ACSets ─ v0.2.21 Updating `~/.julia/environments/v1.12/Project.toml` [6f00c28b] + DiagrammaticEquations v0.1.8 Updating `~/.julia/environments/v1.12/Manifest.toml` [227ef7b5] + ACSets v0.2.21 [621f4979] + AbstractFFTs v1.5.0 [1520ce14] + AbstractTrees v0.4.5 [7d9f7c33] + Accessors v0.1.42 [79e6a3ab] + Adapt v4.3.0 [23cfdc9f] + AlgebraicInterfaces v0.1.4 [66dad0bd] + AliasTables v1.1.3 [ec485272] + ArnoldiMethod v0.4.0 [4fba245c] + ArrayInterface v7.18.0 [13072b0f] + AxisAlgorithms v1.1.0 [39de3d68] + AxisArrays v0.4.7 [e2ed5e7c] + Bijections v0.1.9 [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 [fa961155] + CEnum v0.5.0 [2a0fbf3d] + CPUSummary v0.2.6 [aafaddc9] + CatIndices v0.2.2 [134e5e36] + Catlab 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libblastrampoline_jll v5.12.0+0 [8e850ede] + nghttp2_jll v1.64.0+1 [3f19e933] + p7zip_jll v17.5.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Installation completed after 7.28s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... ERROR: LoadError: The following 2 direct dependencies failed to precompile: DiagrammaticEquations Failed to precompile DiagrammaticEquations [6f00c28b-6bed-4403-80fa-30e0dc12f317] to "/home/pkgeval/.julia/compiled/v1.12/DiagrammaticEquations/jl_WQNXcQ". WARNING: Detected access to binding `decapodeacset.Decapode` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. WARNING: Detected access to binding `decapodeacset.NamedDecapode` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. WARNING: Detected access to binding `decapodeacset.SummationDecapode` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. WARNING: Constructor for type "Decapode" was extended in `DiagrammaticEquations` without explicit qualification or import. NOTE: Assumed "Decapode" refers to `decapodeacset.Decapode`. This behavior is deprecated and may differ in future versions.` NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function Decapode end`. Hint: To silence the warning, qualify `Decapode` as `decapodeacset.Decapode` in the method signature or explicitly `import decapodeacset: Decapode`. WARNING: Constructor for type "SummationDecapode" was extended in `DiagrammaticEquations` without explicit qualification or import. NOTE: Assumed "SummationDecapode" refers to `decapodeacset.SummationDecapode`. This behavior is deprecated and may differ in future versions.` NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function SummationDecapode end`. Hint: To silence the warning, qualify `SummationDecapode` as `decapodeacset.SummationDecapode` in the method signature or explicitly `import decapodeacset: SummationDecapode`. WARNING: Constructor for type "Term" was extended in `DiagrammaticEquations` without explicit qualification or import. NOTE: Assumed "Term" refers to `decapodes.Term`. This behavior is deprecated and may differ in future versions.` NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function Term end`. Hint: To silence the warning, qualify `Term` as `decapodes.Term` in the method signature or explicitly `import decapodes: Term`. WARNING: Constructor for type "Alg" was extended in `ImageFiltering` without explicit qualification or import. NOTE: Assumed "Alg" refers to `Algorithm.Alg`. This behavior is deprecated and may differ in future versions.` NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function Alg end`. Hint: To silence the warning, qualify `Alg` as `Algorithm.Alg` in the method signature or explicitly `import Algorithm: Alg`. WARNING: Constructor for type "Int16" was extended in `VectorizationBase` without explicit qualification or import. NOTE: Assumed "Int16" refers to `Base.Int16`. This behavior is deprecated and may differ in future versions.` NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function Int16 end`. Hint: To silence the warning, qualify `Int16` as `Base.Int16` in the method signature or explicitly `import Base: Int16`. WARNING: Constructor for type "Int64" was extended in `VectorizationBase` without explicit qualification or import. NOTE: Assumed "Int64" refers to `Base.Int64`. This behavior is deprecated and may differ in future versions.` NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function Int64 end`. Hint: To silence the warning, qualify `Int64` as `Base.Int64` in the method signature or explicitly `import Base: Int64`. WARNING: Constructor for type "Int32" was extended in `VectorizationBase` without explicit qualification or import. NOTE: Assumed "Int32" refers to `Base.Int32`. This behavior is deprecated and may differ in future versions.` NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function Int32 end`. Hint: To silence the warning, qualify `Int32` as `Base.Int32` in the method signature or explicitly `import Base: Int32`. WARNING: Constructor for type "UInt8" was extended in `VectorizationBase` without explicit qualification or import. NOTE: Assumed "UInt8" refers to `Base.UInt8`. This behavior is deprecated and may differ in future versions.` NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function UInt8 end`. Hint: To silence the warning, qualify `UInt8` as `Base.UInt8` in the method signature or explicitly `import Base: UInt8`. WARNING: Constructor for type "UInt16" was extended in `VectorizationBase` without explicit qualification or import. NOTE: Assumed "UInt16" refers to `Base.UInt16`. This behavior is deprecated and may differ in future versions.` NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function UInt16 end`. Hint: To silence the warning, qualify `UInt16` as `Base.UInt16` in the method signature or explicitly `import Base: UInt16`. WARNING: Constructor for type "Float32" was extended in `VectorizationBase` without explicit qualification or import. NOTE: Assumed "Float32" refers to `Base.Float32`. This behavior is deprecated and may differ in future versions.` NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function Float32 end`. Hint: To silence the warning, qualify `Float32` as `Base.Float32` in the method signature or explicitly `import Base: Float32`. WARNING: Constructor for type "UInt64" was extended in `VectorizationBase` without explicit qualification or import. NOTE: Assumed "UInt64" refers to `Base.UInt64`. This behavior is deprecated and may differ in future versions.` NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function UInt64 end`. Hint: To silence the warning, qualify `UInt64` as `Base.UInt64` in the method signature or explicitly `import Base: UInt64`. WARNING: Constructor for type "Bool" was extended in `VectorizationBase` without explicit qualification or import. NOTE: Assumed "Bool" refers to `Base.Bool`. This behavior is deprecated and may differ in future versions.` NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function Bool end`. Hint: To silence the warning, qualify `Bool` as `Base.Bool` in the method signature or explicitly `import Base: Bool`. WARNING: Constructor for type "Int8" was extended in `VectorizationBase` without explicit qualification or import. NOTE: Assumed "Int8" refers to `Base.Int8`. This behavior is deprecated and may differ in future versions.` NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function Int8 end`. Hint: To silence the warning, qualify `Int8` as `Base.Int8` in the method signature or explicitly `import Base: Int8`. WARNING: Constructor for type "Float64" was extended in `VectorizationBase` without explicit qualification or import. NOTE: Assumed "Float64" refers to `Base.Float64`. This behavior is deprecated and may differ in future versions.` NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function Float64 end`. Hint: To silence the warning, qualify `Float64` as `Base.Float64` in the method signature or explicitly `import Base: Float64`. WARNING: Constructor for type "UInt32" was extended in `VectorizationBase` without explicit qualification or import. NOTE: Assumed "UInt32" refers to `Base.UInt32`. This behavior is deprecated and may differ in future versions.` NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function UInt32 end`. Hint: To silence the warning, qualify `UInt32` as `Base.UInt32` in the method signature or explicitly `import Base: UInt32`. WARNING: Constructor for type "Float16" was extended in `VectorizationBase` without explicit qualification or import. NOTE: Assumed "Float16" refers to `Base.Float16`. This behavior is deprecated and may differ in future versions.` NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function Float16 end`. Hint: To silence the warning, qualify `Float16` as `Base.Float16` in the method signature or explicitly `import Base: Float16`. Error encountered while load FileIO.File{FileIO.DataFormat{:JLD2}, String}("/tmp/jl_unMq4x"). Fatal error: ERROR: LoadError: ConcurrencyViolationError("deadlock detected in loading JLD2 using JLD2") Stacktrace: [1] canstart_loading(modkey::Base.PkgId, build_id::UInt128, stalecheck::Bool) @ Base ./loading.jl:2219 [2] start_loading(modkey::Base.PkgId, build_id::UInt128, stalecheck::Bool) @ Base ./loading.jl:2227 [3] _require_prelocked(uuidkey::Base.PkgId, env::Nothing) @ Base ./loading.jl:2497 [4] _require_prelocked @ ./loading.jl:2496 [inlined] [5] macro expansion @ ./lock.jl:376 [inlined] [6] __require(uuidkey::Base.PkgId) @ Base ./loading.jl:2494 [7] require @ ./loading.jl:2492 [inlined] [8] #37 @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:203 [inlined] [9] lock(f::FileIO.var"#37#38"{Base.PkgId}, l::ReentrantLock) @ Base ./lock.jl:335 [10] action(::Symbol, ::Vector{Union{Base.PkgId, Module}}, ::FileIO.Formatted; options::@Kwargs{}) @ FileIO ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:203 [11] action @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:196 [inlined] [12] action @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:185 [inlined] [13] load(::String; options::@Kwargs{}) @ FileIO ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:113 [14] load @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:109 [inlined] [15] (::JLD2.var"#111#112")(path::String, ::IOStream) @ JLD2 ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:26 [16] mktemp(fn::JLD2.var"#111#112", parent::String) @ Base.Filesystem ./file.jl:870 [17] mktemp(fn::Function) @ Base.Filesystem ./file.jl:868 [18] macro expansion @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:15 [inlined] [19] macro expansion @ ~/.julia/packages/PrecompileTools/L8A3n/src/workloads.jl:78 [inlined] [20] macro expansion @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:14 [inlined] [21] macro expansion @ ~/.julia/packages/PrecompileTools/L8A3n/src/workloads.jl:140 [inlined] [22] top-level scope @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:139 Stacktrace: [1] handle_error(e::ConcurrencyViolationError, q::Base.PkgId, bt::Vector{Union{Ptr{Nothing}, Base.InterpreterIP}}) @ FileIO ~/.julia/packages/FileIO/ePyCW/src/error_handling.jl:71 [2] handle_exceptions(exceptions::Vector{Tuple{Any, Union{Base.PkgId, Module}, Vector}}, action::String) @ FileIO ~/.julia/packages/FileIO/ePyCW/src/error_handling.jl:66 [3] action(::Symbol, ::Vector{Union{Base.PkgId, Module}}, ::FileIO.Formatted; options::@Kwargs{}) @ FileIO ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:228 [4] action @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:196 [inlined] [5] action @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:185 [inlined] [6] load(::String; options::@Kwargs{}) @ FileIO ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:113 [7] load @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:109 [inlined] [8] (::JLD2.var"#111#112")(path::String, ::IOStream) @ JLD2 ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:26 [9] mktemp(fn::JLD2.var"#111#112", parent::String) @ Base.Filesystem ./file.jl:870 [10] mktemp(fn::Function) @ Base.Filesystem ./file.jl:868 [11] macro expansion @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:15 [inlined] [12] macro expansion @ ~/.julia/packages/PrecompileTools/L8A3n/src/workloads.jl:78 [inlined] [13] macro expansion @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:14 [inlined] [14] macro expansion @ ~/.julia/packages/PrecompileTools/L8A3n/src/workloads.jl:140 [inlined] [15] top-level scope @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:139 [16] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:304 [17] IncludeInto @ ./Base.jl:305 [inlined] [18] top-level scope @ ~/.julia/packages/JLD2/wLPAN/src/JLD2.jl:518 [19] include(mod::Module, _path::String) @ Base ./Base.jl:303 [20] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3015 [21] top-level scope @ stdin:5 [22] eval(m::Module, e::Any) @ Core ./boot.jl:489 [23] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2861 [24] include_string @ ./loading.jl:2871 [inlined] [25] exec_options(opts::Base.JLOptions) @ Base ./client.jl:326 [26] _start() @ Base ./client.jl:560 in expression starting at /home/pkgeval/.julia/packages/JLD2/wLPAN/src/precompile.jl:3 in expression starting at /home/pkgeval/.julia/packages/JLD2/wLPAN/src/JLD2.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile JLD2 [033835bb-8acc-5ee8-8aae-3f567f8a3819] to "/home/pkgeval/.julia/compiled/v1.12/JLD2/jl_Xbxr9N". Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3302 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2688 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:93 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:88 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:114 [7] apply_gr_kw(::NamedTuple, ::GlobalRef, ::Any, ::Vararg{Any}) @ Base ./reflection.jl:1279 [8] #invokelatest_gr#232 @ ./reflection.jl:1287 [inlined] [9] invokelatest_gr @ ./reflection.jl:1281 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3873 [11] maybe_cachefile_lock @ ./loading.jl:3870 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2674 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2502 [14] macro expansion @ ./loading.jl:2430 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2395 [17] require(into::Module, mod::Symbol) @ Base ./loading.jl:2371 [18] top-level scope @ ~/.julia/packages/MetaGraphs/qq8oz/src/MetaGraphs.jl:3 [19] include(mod::Module, _path::String) @ Base ./Base.jl:303 [20] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3015 [21] top-level scope @ stdin:5 [22] eval(m::Module, e::Any) @ Core ./boot.jl:489 [23] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2861 [24] include_string @ ./loading.jl:2871 [inlined] [25] exec_options(opts::Base.JLOptions) @ Base ./client.jl:326 [26] _start() @ Base ./client.jl:560 in expression starting at /home/pkgeval/.julia/packages/MetaGraphs/qq8oz/src/MetaGraphs.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile MetaGraphs [626554b9-1ddb-594c-aa3c-2596fe9399a5] to "/home/pkgeval/.julia/compiled/v1.12/MetaGraphs/jl_NJC7c9". Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3302 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2688 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:93 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:88 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:114 [7] apply_gr_kw(::NamedTuple, ::GlobalRef, ::Any, ::Vararg{Any}) @ Base ./reflection.jl:1279 [8] #invokelatest_gr#232 @ ./reflection.jl:1287 [inlined] [9] invokelatest_gr @ ./reflection.jl:1281 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3873 [11] maybe_cachefile_lock @ ./loading.jl:3870 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2674 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2502 [14] macro expansion @ ./loading.jl:2430 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2395 [17] require(into::Module, mod::Symbol) @ Base ./loading.jl:2371 [18] top-level scope @ ~/.julia/packages/ImageSegmentation/sYULr/src/ImageSegmentation.jl:11 [19] include(mod::Module, _path::String) @ Base ./Base.jl:303 [20] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3015 [21] top-level scope @ stdin:5 [22] eval(m::Module, e::Any) @ Core ./boot.jl:489 [23] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2861 [24] include_string @ ./loading.jl:2871 [inlined] [25] exec_options(opts::Base.JLOptions) @ Base ./client.jl:326 [26] _start() @ Base ./client.jl:560 in expression starting at /home/pkgeval/.julia/packages/ImageSegmentation/sYULr/src/ImageSegmentation.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile ImageSegmentation [80713f31-8817-5129-9cf8-209ff8fb23e1] to "/home/pkgeval/.julia/compiled/v1.12/ImageSegmentation/jl_G4Gsuk". Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3302 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2688 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:93 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:88 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:114 [7] apply_gr_kw(::NamedTuple, ::GlobalRef, ::Any, ::Vararg{Any}) @ Base ./reflection.jl:1279 [8] #invokelatest_gr#232 @ ./reflection.jl:1287 [inlined] [9] invokelatest_gr @ ./reflection.jl:1281 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3873 [11] maybe_cachefile_lock @ ./loading.jl:3870 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2674 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2502 [14] macro expansion @ ./loading.jl:2430 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2395 [17] require(into::Module, mod::Symbol) @ Base ./loading.jl:2371 [18] include(mod::Module, _path::String) @ Base ./Base.jl:303 [19] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3015 [20] top-level scope @ stdin:5 [21] eval(m::Module, e::Any) @ Core ./boot.jl:489 [22] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2861 [23] include_string @ ./loading.jl:2871 [inlined] [24] exec_options(opts::Base.JLOptions) @ Base ./client.jl:326 [25] _start() @ Base ./client.jl:560 in expression starting at /home/pkgeval/.julia/packages/Images/hQ3Jo/src/Images.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile Images [916415d5-f1e6-5110-898d-aaa5f9f070e0] to "/home/pkgeval/.julia/compiled/v1.12/Images/jl_FGCYQw". Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3302 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2688 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:93 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:88 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:114 [7] apply_gr_kw(::NamedTuple, ::GlobalRef, ::Any, ::Vararg{Any}) @ Base ./reflection.jl:1279 [8] #invokelatest_gr#232 @ ./reflection.jl:1287 [inlined] [9] invokelatest_gr @ ./reflection.jl:1281 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3873 [11] maybe_cachefile_lock @ ./loading.jl:3870 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2674 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2502 [14] macro expansion @ ./loading.jl:2430 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2395 [17] require(into::Module, mod::Symbol) @ Base ./loading.jl:2371 [18] top-level scope @ ~/.julia/packages/ColorSchemeTools/bGr3j/src/ColorSchemeTools.jl:17 [19] include(mod::Module, _path::String) @ Base ./Base.jl:303 [20] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3015 [21] top-level scope @ stdin:5 [22] eval(m::Module, e::Any) @ Core ./boot.jl:489 [23] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2861 [24] include_string @ ./loading.jl:2871 [inlined] [25] exec_options(opts::Base.JLOptions) @ Base ./client.jl:326 [26] _start() @ Base ./client.jl:560 in expression starting at /home/pkgeval/.julia/packages/ColorSchemeTools/bGr3j/src/ColorSchemeTools.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile ColorSchemeTools [d3e213a1-5e82-5c18-bb32-2a58a99f8c46] to "/home/pkgeval/.julia/compiled/v1.12/ColorSchemeTools/jl_SG1S9q". Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3302 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2688 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:93 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:88 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:114 [7] apply_gr_kw(::NamedTuple, ::GlobalRef, ::Any, ::Vararg{Any}) @ Base ./reflection.jl:1279 [8] #invokelatest_gr#232 @ ./reflection.jl:1287 [inlined] [9] invokelatest_gr @ ./reflection.jl:1281 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3873 [11] maybe_cachefile_lock @ ./loading.jl:3870 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2674 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2502 [14] macro expansion @ ./loading.jl:2430 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2395 [17] require(into::Module, mod::Symbol) @ Base ./loading.jl:2371 [18] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:304 [19] top-level scope @ ~/.julia/packages/DiagrammaticEquations/e0DTa/src/deca/Deca.jl:14 [20] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:304 [21] top-level scope @ ~/.julia/packages/DiagrammaticEquations/e0DTa/src/DiagrammaticEquations.jl:69 [22] include(mod::Module, _path::String) @ Base ./Base.jl:303 [23] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3015 [24] top-level scope @ stdin:5 [25] eval(m::Module, e::Any) @ Core ./boot.jl:489 [26] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2861 [27] include_string @ ./loading.jl:2871 [inlined] [28] exec_options(opts::Base.JLOptions) @ Base ./client.jl:326 [29] _start() @ Base ./client.jl:560 in expression starting at /home/pkgeval/.julia/packages/DiagrammaticEquations/e0DTa/src/deca/deca_visualization.jl:13 in expression starting at /home/pkgeval/.julia/packages/DiagrammaticEquations/e0DTa/src/deca/Deca.jl:1 in expression starting at /home/pkgeval/.julia/packages/DiagrammaticEquations/e0DTa/src/DiagrammaticEquations.jl:1 in expression starting at stdin:5 CatlabMetaGraphsExt Failed to precompile CatlabMetaGraphsExt [5e51d586-aaca-557a-95fe-36469851e5ed] to "/home/pkgeval/.julia/compiled/v1.12/CatlabMetaGraphsExt/jl_oBUU6O". Error encountered while load FileIO.File{FileIO.DataFormat{:JLD2}, String}("/tmp/jl_OlFnGd"). Fatal error: ERROR: LoadError: ConcurrencyViolationError("deadlock detected in loading JLD2 using JLD2") Stacktrace: [1] canstart_loading(modkey::Base.PkgId, build_id::UInt128, stalecheck::Bool) @ Base ./loading.jl:2219 [2] start_loading(modkey::Base.PkgId, build_id::UInt128, stalecheck::Bool) @ Base ./loading.jl:2227 [3] _require_prelocked(uuidkey::Base.PkgId, env::Nothing) @ Base ./loading.jl:2497 [4] _require_prelocked @ ./loading.jl:2496 [inlined] [5] macro expansion @ ./lock.jl:376 [inlined] [6] __require(uuidkey::Base.PkgId) @ Base ./loading.jl:2494 [7] require @ ./loading.jl:2492 [inlined] [8] #37 @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:203 [inlined] [9] lock(f::FileIO.var"#37#38"{Base.PkgId}, l::ReentrantLock) @ Base ./lock.jl:335 [10] action(::Symbol, ::Vector{Union{Base.PkgId, Module}}, ::FileIO.Formatted; options::@Kwargs{}) @ FileIO ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:203 [11] action @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:196 [inlined] [12] action @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:185 [inlined] [13] load(::String; options::@Kwargs{}) @ FileIO ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:113 [14] load @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:109 [inlined] [15] (::JLD2.var"#111#112")(path::String, ::IOStream) @ JLD2 ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:26 [16] mktemp(fn::JLD2.var"#111#112", parent::String) @ Base.Filesystem ./file.jl:870 [17] mktemp(fn::Function) @ Base.Filesystem ./file.jl:868 [18] macro expansion @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:15 [inlined] [19] macro expansion @ ~/.julia/packages/PrecompileTools/L8A3n/src/workloads.jl:78 [inlined] [20] macro expansion @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:14 [inlined] [21] macro expansion @ ~/.julia/packages/PrecompileTools/L8A3n/src/workloads.jl:140 [inlined] [22] top-level scope @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:139 Stacktrace: [1] handle_error(e::ConcurrencyViolationError, q::Base.PkgId, bt::Vector{Union{Ptr{Nothing}, Base.InterpreterIP}}) @ FileIO ~/.julia/packages/FileIO/ePyCW/src/error_handling.jl:71 [2] handle_exceptions(exceptions::Vector{Tuple{Any, Union{Base.PkgId, Module}, Vector}}, action::String) @ FileIO ~/.julia/packages/FileIO/ePyCW/src/error_handling.jl:66 [3] action(::Symbol, ::Vector{Union{Base.PkgId, Module}}, ::FileIO.Formatted; options::@Kwargs{}) @ FileIO ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:228 [4] action @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:196 [inlined] [5] action @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:185 [inlined] [6] load(::String; options::@Kwargs{}) @ FileIO ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:113 [7] load @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:109 [inlined] [8] (::JLD2.var"#111#112")(path::String, ::IOStream) @ JLD2 ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:26 [9] mktemp(fn::JLD2.var"#111#112", parent::String) @ Base.Filesystem ./file.jl:870 [10] mktemp(fn::Function) @ Base.Filesystem ./file.jl:868 [11] macro expansion @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:15 [inlined] [12] macro expansion @ ~/.julia/packages/PrecompileTools/L8A3n/src/workloads.jl:78 [inlined] [13] macro expansion @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:14 [inlined] [14] macro expansion @ ~/.julia/packages/PrecompileTools/L8A3n/src/workloads.jl:140 [inlined] [15] top-level scope @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:139 [16] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:304 [17] IncludeInto @ ./Base.jl:305 [inlined] [18] top-level scope @ ~/.julia/packages/JLD2/wLPAN/src/JLD2.jl:518 [19] include(mod::Module, _path::String) @ Base ./Base.jl:303 [20] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3015 [21] top-level scope @ stdin:5 [22] eval(m::Module, e::Any) @ Core ./boot.jl:489 [23] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2861 [24] include_string @ ./loading.jl:2871 [inlined] [25] exec_options(opts::Base.JLOptions) @ Base ./client.jl:326 [26] _start() @ Base ./client.jl:560 in expression starting at /home/pkgeval/.julia/packages/JLD2/wLPAN/src/precompile.jl:3 in expression starting at /home/pkgeval/.julia/packages/JLD2/wLPAN/src/JLD2.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile JLD2 [033835bb-8acc-5ee8-8aae-3f567f8a3819] to "/home/pkgeval/.julia/compiled/v1.12/JLD2/jl_8r30AL". Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3302 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2688 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:93 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:88 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:114 [7] apply_gr_kw(::NamedTuple, ::GlobalRef, ::Any, ::Vararg{Any}) @ Base ./reflection.jl:1279 [8] #invokelatest_gr#232 @ ./reflection.jl:1287 [inlined] [9] invokelatest_gr @ ./reflection.jl:1281 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3873 [11] maybe_cachefile_lock @ ./loading.jl:3870 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2674 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2502 [14] macro expansion @ ./loading.jl:2430 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2395 [17] require(into::Module, mod::Symbol) @ Base ./loading.jl:2371 [18] top-level scope @ ~/.julia/packages/MetaGraphs/qq8oz/src/MetaGraphs.jl:3 [19] include(mod::Module, _path::String) @ Base ./Base.jl:303 [20] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3015 [21] top-level scope @ stdin:5 [22] eval(m::Module, e::Any) @ Core ./boot.jl:489 [23] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2861 [24] include_string @ ./loading.jl:2871 [inlined] [25] exec_options(opts::Base.JLOptions) @ Base ./client.jl:326 [26] _start() @ Base ./client.jl:560 in expression starting at /home/pkgeval/.julia/packages/MetaGraphs/qq8oz/src/MetaGraphs.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile MetaGraphs [626554b9-1ddb-594c-aa3c-2596fe9399a5] to "/home/pkgeval/.julia/compiled/v1.12/MetaGraphs/jl_9ZJq5Z". Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3302 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2688 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:93 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:88 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:114 [7] apply_gr_kw(::NamedTuple, ::GlobalRef, ::Any, ::Vararg{Any}) @ Base ./reflection.jl:1279 [8] #invokelatest_gr#232 @ ./reflection.jl:1287 [inlined] [9] invokelatest_gr @ ./reflection.jl:1281 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3873 [11] maybe_cachefile_lock @ ./loading.jl:3870 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2674 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2502 [14] macro expansion @ ./loading.jl:2430 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2395 [17] require(into::Module, mod::Symbol) @ Base ./loading.jl:2371 [18] top-level scope @ ~/.julia/packages/Catlab/jPXBM/ext/CatlabMetaGraphsExt.jl:5 [19] include(mod::Module, _path::String) @ Base ./Base.jl:303 [20] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3015 [21] top-level scope @ stdin:5 [22] eval(m::Module, e::Any) @ Core ./boot.jl:489 [23] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2861 [24] include_string @ ./loading.jl:2871 [inlined] [25] exec_options(opts::Base.JLOptions) @ Base ./client.jl:326 [26] _start() @ Base ./client.jl:560 in expression starting at /home/pkgeval/.julia/packages/Catlab/jPXBM/ext/CatlabMetaGraphsExt.jl:1 in expression starting at stdin:5 in expression starting at /PkgEval.jl/scripts/precompile.jl:37 Precompilation failed after 2316.81s ################################################################################ # Testing # Testing DiagrammaticEquations Status `/tmp/jl_cT9zaZ/Project.toml` [227ef7b5] ACSets v0.2.21 [4c88cf16] Aqua v0.8.11 [134e5e36] Catlab v0.16.19 [b1c52339] CombinatorialSpaces v0.7.4 [6f00c28b] DiagrammaticEquations v0.1.8 [d8e11817] MLStyle v0.4.17 [d1185830] SymbolicUtils v3.23.0 [37e2e46d] LinearAlgebra v1.12.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_cT9zaZ/Manifest.toml` [227ef7b5] ACSets v0.2.21 [a4c015fc] ANSIColoredPrinters v0.0.1 [621f4979] AbstractFFTs v1.5.0 [1520ce14] AbstractTrees v0.4.5 [7d9f7c33] Accessors v0.1.42 [79e6a3ab] Adapt v4.3.0 [23cfdc9f] AlgebraicInterfaces v0.1.4 [66dad0bd] AliasTables v1.1.3 [4c88cf16] Aqua v0.8.11 [ec485272] ArnoldiMethod v0.4.0 [4fba245c] ArrayInterface v7.18.0 [4c555306] ArrayLayouts v1.11.1 [a9b6321e] Atomix v1.1.1 [13072b0f] AxisAlgorithms v1.1.0 [39de3d68] AxisArrays v0.4.7 [e2ed5e7c] Bijections v0.1.9 [62783981] BitTwiddlingConvenienceFunctions v0.1.6 [fa961155] CEnum v0.5.0 [2a0fbf3d] CPUSummary v0.2.6 [aafaddc9] CatIndices v0.2.2 [134e5e36] Catlab v0.16.19 [d360d2e6] ChainRulesCore v1.25.1 [fb6a15b2] CloseOpenIntervals v0.1.13 [aaaa29a8] Clustering v0.15.8 [944b1d66] CodecZlib v0.7.8 [d3e213a1] ColorSchemeTools v1.6.0 [35d6a980] ColorSchemes v3.29.0 ⌅ [3da002f7] ColorTypes v0.11.5 ⌃ [c3611d14] ColorVectorSpace v0.10.0 ⌅ [5ae59095] Colors v0.12.11 [b1c52339] CombinatorialSpaces v0.7.4 [861a8166] Combinatorics v1.0.2 [f70d9fcc] CommonWorldInvalidations v1.0.0 [0fb5dd42] CompTime v0.1.2 [34da2185] Compat v4.16.0 [a81c6b42] Compose v0.9.5 [a33af91c] CompositionsBase v0.1.2 [ed09eef8] ComputationalResources v0.3.2 [187b0558] ConstructionBase v1.5.8 [150eb455] CoordinateTransformations v0.6.4 [adafc99b] CpuId v0.3.1 [a8cc5b0e] Crayons v4.1.1 [dc8bdbbb] CustomUnitRanges v1.0.2 [9a962f9c] DataAPI v1.16.0 [0c4ad18d] DataMigrations v0.1.1 [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [6f00c28b] DiagrammaticEquations v0.1.8 [b4f34e82] Distances v0.10.12 [ffbed154] DocStringExtensions v0.9.3 [e30172f5] Documenter v1.9.0 [7c1d4256] DynamicPolynomials v0.6.1 [e2ba6199] ExprTools v0.1.10 [55351af7] ExproniconLite v0.10.14 [411431e0] Extents v0.1.5 [4f61f5a4] FFTViews v0.3.2 [7a1cc6ca] FFTW v1.8.1 [5789e2e9] FileIO v1.17.0 [1a297f60] FillArrays v1.13.0 [53c48c17] FixedPointNumbers v0.8.5 ⌅ [f0ffcf3b] GATlab v0.1.5 [6b9d7cbe] GeneralizedGenerated v0.3.3 [68eda718] GeoFormatTypes v0.4.4 [cf35fbd7] GeoInterface v1.4.1 [5c1252a2] GeometryBasics v0.5.6 [d7ba0133] Git v1.3.1 [a2bd30eb] Graphics v1.1.3 [86223c79] Graphs v1.12.0 [2c695a8d] HistogramThresholding v0.3.1 [3e5b6fbb] HostCPUFeatures v0.1.17 [b5f81e59] IOCapture v0.2.5 [615f187c] IfElse v0.1.1 [2803e5a7] ImageAxes v0.6.12 [c817782e] ImageBase v0.1.7 [cbc4b850] ImageBinarization v0.3.1 [f332f351] ImageContrastAdjustment v0.3.12 [a09fc81d] ImageCore v0.10.5 [89d5987c] ImageCorners v0.1.3 [51556ac3] ImageDistances v0.2.17 [6a3955dd] ImageFiltering v0.7.9 [82e4d734] ImageIO v0.6.9 [6218d12a] ImageMagick v1.4.1 [bc367c6b] ImageMetadata v0.9.10 [787d08f9] ImageMorphology v0.4.5 [2996bd0c] ImageQualityIndexes v0.3.7 [80713f31] ImageSegmentation v1.8.4 [4e3cecfd] ImageShow v0.3.8 [02fcd773] ImageTransformations v0.10.1 [916415d5] Images v0.26.2 [9b13fd28] IndirectArrays v1.0.0 [d25df0c9] Inflate v0.1.5 [1d092043] IntegralArrays v0.1.6 [a98d9a8b] Interpolations v0.15.1 [8197267c] IntervalSets v0.7.10 [3587e190] InverseFunctions v0.1.17 [92d709cd] IrrationalConstants v0.2.4 [c8e1da08] IterTools v1.10.0 [82899510] IteratorInterfaceExtensions v1.0.0 ⌅ [033835bb] JLD2 v0.4.54 [692b3bcd] JLLWrappers v1.7.0 [682c06a0] JSON v0.21.4 [0f8b85d8] JSON3 v1.14.1 [b835a17e] JpegTurbo v0.1.6 [b14d175d] JuliaVariables v0.2.4 [63c18a36] KernelAbstractions v0.9.34 [ba0b0d4f] Krylov v0.9.10 [b964fa9f] LaTeXStrings v1.4.0 [10f19ff3] LayoutPointers v0.1.17 [0e77f7df] LazilyInitializedFields v1.3.0 [5078a376] LazyArrays v2.6.1 [8cdb02fc] LazyModules v0.3.1 [9c8b4983] LightXML v0.9.1 [98b081ad] Literate v2.20.1 [2ab3a3ac] LogExpFunctions v0.3.29 [bdcacae8] LoopVectorization v0.12.171 [d8e11817] MLStyle v0.4.17 [1914dd2f] MacroTools v0.5.15 [d125e4d3] ManualMemory v0.1.8 [dbb5928d] MappedArrays v0.4.2 [d0879d2d] MarkdownAST v0.1.2 [442fdcdd] Measures v0.3.2 [7269a6da] MeshIO v0.5.3 ⌃ [626554b9] MetaGraphs v0.7.2 [e1d29d7a] Missings v1.2.0 [e94cdb99] MosaicViews v0.3.4 [102ac46a] MultivariatePolynomials v0.5.7 [d8a4904e] MutableArithmetics v1.6.4 [77ba4419] NaNMath v1.1.2 [71a1bf82] NameResolution v0.1.5 [b8a86587] NearestNeighbors v0.4.21 [f09324ee] Netpbm v1.1.1 [6fe1bfb0] OffsetArrays v1.16.0 [52e1d378] OpenEXR v0.3.3 [bac558e1] OrderedCollections v1.8.0 [12d937ae] PEG v1.0.2 [f57f5aa1] PNGFiles v0.4.4 [5432bcbf] PaddedViews v0.5.12 [d96e819e] Parameters v0.12.3 [69de0a69] Parsers v2.8.1 [2ae35dd2] Permutations v0.4.23 [eebad327] PkgVersion v0.3.3 [1d0040c9] PolyesterWeave v0.2.2 [f27b6e38] Polynomials v4.0.19 [aea7be01] PrecompileTools v1.2.1 [21216c6a] Preferences v1.4.3 [8162dcfd] PrettyPrint v0.2.0 [08abe8d2] PrettyTables v2.4.0 [92933f4c] ProgressMeter v1.10.2 [43287f4e] PtrArrays v1.3.0 [4b34888f] QOI v1.0.1 [dca85d43] QuartzImageIO v0.7.5 [94ee1d12] Quaternions 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Libgpg_error_jll v1.51.1+0 [94ce4f54] Libiconv_jll v1.18.0+0 ⌅ [89763e89] Libtiff_jll v4.4.0+0 ⌃ [d3a379c0] LittleCMS_jll v2.12.0+0 [856f044c] MKL_jll v2025.0.1+1 [18a262bb] OpenEXR_jll v3.2.4+0 ⌃ [643b3616] OpenJpeg_jll v2.4.0+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [02c8fc9c] XML2_jll v2.13.6+1 [aed1982a] XSLT_jll v1.1.42+0 [4f6342f7] Xorg_libX11_jll v1.8.6+3 [0c0b7dd1] Xorg_libXau_jll v1.0.12+0 [a3789734] Xorg_libXdmcp_jll v1.1.5+0 [1082639a] Xorg_libXext_jll v1.3.6+3 [14d82f49] Xorg_libpthread_stubs_jll v0.1.2+0 [c7cfdc94] Xorg_libxcb_jll v1.17.0+3 [c5fb5394] Xorg_xtrans_jll v1.5.1+0 [3161d3a3] Zstd_jll v1.5.7+1 [b53b4c65] libpng_jll v1.6.47+0 [075b6546] libsixel_jll v1.10.5+0 ⌃ [c5f90fcd] libwebp_jll v1.4.0+0 [1317d2d5] oneTBB_jll v2022.0.0+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.6.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.12.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [1a1011a3] SharedArrays v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.12.0 [f489334b] StyledStrings v1.11.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.11.1+1 [e37daf67] LibGit2_jll v1.9.0+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2024.12.31 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.5+0 [458c3c95] OpenSSL_jll v3.0.16+0 [efcefdf7] PCRE2_jll v10.44.0+1 [bea87d4a] SuiteSparse_jll v7.8.3+2 [83775a58] Zlib_jll v1.3.1+2 [8e850b90] libblastrampoline_jll v5.12.0+0 [8e850ede] nghttp2_jll v1.64.0+1 [3f19e933] p7zip_jll v17.5.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... Test Summary: | Pass Total Time Core | 1 1 0.2s Precompiling packages... ✗ JLD2 ✗ MetaGraphs ✗ Catlab → CatlabMetaGraphsExt ✗ ImageSegmentation ✗ Images ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 448 running 0 of 2 signal (10): User defined signal 1 unknown function (ip: 0x7768740aaf14) at /lib/x86_64-linux-gnu/libc.so.6 pthread_cond_wait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv_cond_wait at /workspace/srcdir/libuv/src/unix/thread.c:822 ijl_task_get_next at /source/src/scheduler.c:520 poptask at ./task.jl:1187 wait at ./task.jl:1199 #wait#397 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] _trywait at ./asyncevent.jl:185 profile_printing_listener at ./Base.jl:329 #start_profile_listener##0 at ./Base.jl:349 jfptr_YY.start_profile_listenerYY.YY.0_55973.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3452 [inlined] ijl_apply_generic at /source/src/gf.c:3652 jl_apply at /source/src/julia.h:2347 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:454 poptask at ./task.jl:1187 wait at ./task.jl:1199 #wait#397 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] wait_readnb at ./stream.jl:416 eof at ./stream.jl:106 [inlined] eof at ./io.jl:472 [inlined] monitor_std at ./precompilation.jl:766 monitor_std at ./precompilation.jl:762 jfptr_monitor_std_112875.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3452 [inlined] ijl_apply_generic at /source/src/gf.c:3652 #_precompilepkgs##49 at ./precompilation.jl:931 jfptr_YY._precompilepkgsYY.YY.49_63442.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3452 [inlined] ijl_apply_generic at /source/src/gf.c:3652 jl_apply at /source/src/julia.h:2347 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.12/Profile/src/Profile.jl:1362 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (interactive) Task 0x000077686a2560e0 Total snapshots: 1. Utilization: 0% ╎1 @Base/asyncevent.jl:359 (::Base.var"#630#631"{FileWatching.Pidfile.var"#4#… ╎ 1 @Base/asyncevent.jl:185 _trywait(t::Timer) ╎ 1 @Base/condition.jl:136 wait ╎ 1 @Base/condition.jl:141 wait(c::Base.GenericCondition{Base.Threads.SpinL… ╎ 1 @Base/task.jl:1199 wait() ╎ 1 @Base/task.jl:1187 poptask(W::Base.IntrusiveLinkedListSynchronized{Ta… Thread 2 (default) Task 0x0000776866400100 Total snapshots: 1. Utilization: 0% ╎1 @Base/Base.jl:349 (::Base.var"#start_profile_listener##0#start_profile_lis… ╎ 1 @Base/Base.jl:329 profile_printing_listener(cond::Base.AsyncCondition) ╎ 1 @Base/asyncevent.jl:185 _trywait(t::Base.AsyncCondition) ╎ 1 @Base/condition.jl:136 wait ╎ 1 @Base/condition.jl:141 wait(c::Base.GenericCondition{Base.Threads.Spin… ╎ 1 @Base/task.jl:1199 wait() ╎ ╎ 1 @Base/task.jl:1187 poptask(W::Base.IntrusiveLinkedListSynchronized{T… ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 2 signal (10): User defined signal 1 unknown function (ip: 0x7d774ed7cf14) at /lib/x86_64-linux-gnu/libc.so.6 pthread_cond_wait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv_cond_wait at /workspace/srcdir/libuv/src/unix/thread.c:822 ijl_task_get_next at /source/src/scheduler.c:520 poptask at ./task.jl:1187 wait at ./task.jl:1199 #wait#397 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] _trywait at ./asyncevent.jl:185 profile_printing_listener at ./Base.jl:329 #start_profile_listener##0 at ./Base.jl:349 jfptr_YY.start_profile_listenerYY.YY.0_55973.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3452 [inlined] ijl_apply_generic at /source/src/gf.c:3652 jl_apply at /source/src/julia.h:2347 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:454 poptask at ./task.jl:1187 wait at ./task.jl:1199 #wait#397 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] wait at ./process.jl:694 wait at ./process.jl:687 jfptr_wait_76018.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3452 [inlined] ijl_apply_generic at /source/src/gf.c:3652 subprocess_handler at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2383 unknown function (ip: 0x7d774609c0e3) at (unknown file) _jl_invoke at /source/src/gf.c:3452 [inlined] ijl_apply_generic at /source/src/gf.c:3652 #202 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2323 withenv at ./env.jl:265 #187 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2144 with_temp_env at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2002 #183 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2111 #mktempdir#21 at ./file.jl:899 unknown function (ip: 0x7d77460936ac) at (unknown file) _jl_invoke at /source/src/gf.c:3452 [inlined] ijl_apply_generic at /source/src/gf.c:3652 mktempdir at ./file.jl:895 mktempdir at ./file.jl:895 #sandbox#179 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2058 [inlined] sandbox at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2050 unknown function (ip: 0x7d7746087181) at (unknown file) _jl_invoke at /source/src/gf.c:3452 [inlined] ijl_apply_generic at /source/src/gf.c:3652 #test#190 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2308 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2220 [inlined] #test#170 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:486 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:465 unknown function (ip: 0x7d7746086381) at (unknown file) _jl_invoke at /source/src/gf.c:3452 [inlined] ijl_apply_generic at /source/src/gf.c:3652 #test#84 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:164 unknown function (ip: 0x7d774607ca38) at (unknown file) _jl_invoke at /source/src/gf.c:3452 [inlined] ijl_apply_generic at /source/src/gf.c:3652 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:153 #test#82 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:152 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:152 [inlined] #test#81 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:151 [inlined] test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:151 unknown function (ip: 0x7d774607bf9f) at (unknown file) _jl_invoke at /source/src/gf.c:3452 [inlined] ijl_apply_generic at /source/src/gf.c:3652 jl_apply at /source/src/julia.h:2347 [inlined] do_call at /source/src/interpreter.c:124 eval_value at /source/src/interpreter.c:242 eval_stmt_value at /source/src/interpreter.c:193 [inlined] eval_body at /source/src/interpreter.c:692 eval_body at /source/src/interpreter.c:557 eval_body at /source/src/interpreter.c:557 jl_interpret_toplevel_thunk at /source/src/interpreter.c:897 jl_toplevel_eval_flex at /source/src/toplevel.c:1032 jl_toplevel_eval_flex at /source/src/toplevel.c:972 ijl_toplevel_eval at /source/src/toplevel.c:1044 ijl_toplevel_eval_in at /source/src/toplevel.c:1089 eval at ./boot.jl:489 include_string at ./loading.jl:2861 _jl_invoke at /source/src/gf.c:3452 [inlined] ijl_apply_generic at /source/src/gf.c:3652 _include at ./loading.jl:2921 include at ./Base.jl:303 exec_options at ./client.jl:328 _start at ./client.jl:560 jfptr__start_60056.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3452 [inlined] ijl_apply_generic at /source/src/gf.c:3652 jl_apply at /source/src/julia.h:2347 [inlined] true_main at /source/src/jlapi.c:951 jl_repl_entrypoint at /source/src/jlapi.c:1111 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x7d774ed1e249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.12/Profile/src/Profile.jl:1362 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (interactive) Task 0x00007d7741000010 Total snapshots: 1. Utilization: 0% ╎1 @Base/client.jl:560 _start() ╎ 1 @Base/client.jl:328 exec_options(opts::Base.JLOptions) ╎ 1 @Base/Base.jl:303 include(mod::Module, _path::String) ╎ 1 @Base/loading.jl:2921 _include(mapexpr::Function, mod::Module, _path::S… ╎ 1 @Base/loading.jl:2861 include_string(mapexpr::typeof(identity), mod::M… ╎ 1 @Base/boot.jl:489 eval(m::Module, e::Any) ╎ ╎ 1 @Pkg/src/API.jl:151 kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(… ╎ ╎ 1 @Pkg/src/API.jl:151 #test#81 ╎ ╎ 1 @Pkg/src/API.jl:152 test ╎ ╎ 1 @Pkg/src/API.jl:152 test(pkgs::Vector{String}; kwargs::Base.Pairs… ╎ ╎ 1 @Pkg/src/API.jl:153 kwcall(::@NamedTuple{julia_args::Cmd}, ::typ… ╎ ╎ ╎ 1 @Pkg/src/API.jl:164 test(pkgs::Vector{PackageSpec}; io::IOConte… ╎ ╎ ╎ 1 @Pkg/src/API.jl:465 kwcall(::@NamedTuple{julia_args::Cmd, io::… ╎ ╎ ╎ 1 @Pkg/src/API.jl:486 test(ctx::Pkg.Types.Context, pkgs::Vector… ╎ ╎ ╎ 1 @Pkg/…Operations.jl:2220 test ╎ ╎ ╎ 1 @Pkg/…perations.jl:2308 test(ctx::Pkg.Types.Context, pkgs::… ╎ ╎ ╎ ╎ 1 @Pkg/…perations.jl:2050 kwcall(::@NamedTuple{preferences::… ╎ ╎ ╎ ╎ 1 @Pkg/…perations.jl:2058 #sandbox#179 ╎ ╎ ╎ ╎ 1 @Base/file.jl:895 mktempdir(fn::Function) ╎ ╎ ╎ ╎ 1 @Base/file.jl:895 mktempdir(fn::Function, parent::Strin… ╎ ╎ ╎ ╎ 1 @Base/file.jl:899 mktempdir(fn::Pkg.Operations.var"#18… ╎ ╎ ╎ ╎ ╎ 1 @Pkg/…rations.jl:2111 (::Pkg.Operations.var"#183#184"… ╎ ╎ ╎ ╎ ╎ 1 @Pkg/…rations.jl:2002 with_temp_env(fn::Pkg.Operatio… ╎ ╎ ╎ ╎ ╎ 1 @Pkg/…ations.jl:2144 (::Pkg.Operations.var"#187#188… ╎ ╎ ╎ ╎ ╎ 1 @Base/env.jl:265 withenv(::Pkg.Operations.var"#202… ╎ ╎ ╎ ╎ ╎ 1 @Pkg/…tions.jl:2323 (::Pkg.Operations.var"#202#20… ╎ ╎ ╎ ╎ ╎ ╎ 1 @Pkg/…tions.jl:2383 subprocess_handler(cmd::Cmd,… ╎ ╎ ╎ ╎ ╎ ╎ 1 @Base/…cess.jl:687 wait(x::Base.Process) ╎ ╎ ╎ ╎ ╎ ╎ 1 @Base/…cess.jl:694 wait(x::Base.Process, syncd… ╎ ╎ ╎ ╎ ╎ ╎ 1 @Base/…ion.jl:136 wait ╎ ╎ ╎ ╎ ╎ ╎ 1 @Base/…ion.jl:141 wait(c::Base.GenericCondit… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Base/…sk.jl:1199 wait() ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Base/…sk.jl:1187 poptask(W::Base.Intrusiv… Thread 2 (default) Task 0x00007d7741000100 Total snapshots: 1. Utilization: 0% ╎1 @Base/Base.jl:349 (::Base.var"#start_profile_listener##0#start_profile_lis… ╎ 1 @Base/Base.jl:329 profile_printing_listener(cond::Base.AsyncCondition) ╎ 1 @Base/asyncevent.jl:185 _trywait(t::Base.AsyncCondition) ╎ 1 @Base/condition.jl:136 wait ╎ 1 @Base/condition.jl:141 wait(c::Base.GenericCondition{Base.Threads.Spin… ╎ 1 @Base/task.jl:1199 wait() ╎ ╎ 1 @Base/task.jl:1187 poptask(W::Base.IntrusiveLinkedListSynchronized{T… [448] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/DiagrammaticEquations/e0DTa/test/composition.jl:2 unknown function (ip: 0x7768740aaf14) at /lib/x86_64-linux-gnu/libc.so.6 pthread_cond_wait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv_cond_wait at /workspace/srcdir/libuv/src/unix/thread.c:822 ijl_task_get_next at /source/src/scheduler.c:520 [1] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 unknown function (ip: 0x7d774ed7cf14) at /lib/x86_64-linux-gnu/libc.so.6 pthread_cond_wait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv_cond_wait at /workspace/srcdir/libuv/src/unix/thread.c:822 ijl_task_get_next at /source/src/scheduler.c:520 poptask at ./task.jl:1187 poptask at ./task.jl:1187 wait at ./task.jl:1199 wait at ./task.jl:1199 #wait#397 at ./condition.jl:141 #wait#397 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] _trywait at ./asyncevent.jl:185 wait at ./condition.jl:136 [inlined] _trywait at ./asyncevent.jl:185 profile_printing_listener at ./Base.jl:329 profile_printing_listener at ./Base.jl:329 #start_profile_listener##0 at ./Base.jl:349 #start_profile_listener##0 at ./Base.jl:349 jfptr_YY.start_profile_listenerYY.YY.0_55973.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3452 [inlined] ijl_apply_generic at /source/src/gf.c:3652 jfptr_YY.start_profile_listenerYY.YY.0_55973.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3452 [inlined] ijl_apply_generic at /source/src/gf.c:3652 jl_apply at /source/src/julia.h:2347 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) jl_apply at /source/src/julia.h:2347 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:454 uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:454 poptask at ./task.jl:1187 poptask at ./task.jl:1187 wait at ./task.jl:1199 wait at ./task.jl:1199 #wait#397 at ./condition.jl:141 #wait#397 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] _trywait at ./asyncevent.jl:185 wait at ./condition.jl:136 [inlined] wait at ./process.jl:694 #630 at ./asyncevent.jl:359 wait at ./process.jl:687 jfptr_YY.630_70130.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3452 [inlined] ijl_apply_generic at /source/src/gf.c:3652 jl_apply at /source/src/julia.h:2347 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) Allocations: 5935190 (Pool: 5934938; Big: 252); GC: 13 jfptr_wait_76018.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3452 [inlined] ijl_apply_generic at /source/src/gf.c:3652 subprocess_handler at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2383 unknown function (ip: 0x7d774609c0e3) at (unknown file) _jl_invoke at /source/src/gf.c:3452 [inlined] ijl_apply_generic at /source/src/gf.c:3652 #202 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2323 withenv at ./env.jl:265 #187 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2144 with_temp_env at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2002 #183 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2111 #mktempdir#21 at ./file.jl:899 unknown function (ip: 0x7d77460936ac) at (unknown file) _jl_invoke at /source/src/gf.c:3452 [inlined] ijl_apply_generic at /source/src/gf.c:3652 mktempdir at ./file.jl:895 mktempdir at ./file.jl:895 #sandbox#179 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2058 [inlined] sandbox at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2050 unknown function (ip: 0x7d7746087181) at (unknown file) _jl_invoke at /source/src/gf.c:3452 [inlined] ijl_apply_generic at /source/src/gf.c:3652 #test#190 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2308 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2220 [inlined] #test#170 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:486 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:465 unknown function (ip: 0x7d7746086381) at (unknown file) _jl_invoke at /source/src/gf.c:3452 [inlined] ijl_apply_generic at /source/src/gf.c:3652 #test#84 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:164 unknown function (ip: 0x7d774607ca38) at (unknown file) _jl_invoke at /source/src/gf.c:3452 [inlined] ijl_apply_generic at /source/src/gf.c:3652 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:153 #test#82 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:152 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:152 [inlined] #test#81 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:151 [inlined] test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:151 unknown function (ip: 0x7d774607bf9f) at (unknown file) _jl_invoke at /source/src/gf.c:3452 [inlined] ijl_apply_generic at /source/src/gf.c:3652 jl_apply at /source/src/julia.h:2347 [inlined] do_call at /source/src/interpreter.c:124 eval_value at /source/src/interpreter.c:242 eval_stmt_value at /source/src/interpreter.c:193 [inlined] eval_body at /source/src/interpreter.c:692 eval_body at /source/src/interpreter.c:557 eval_body at /source/src/interpreter.c:557 jl_interpret_toplevel_thunk at /source/src/interpreter.c:897 jl_toplevel_eval_flex at /source/src/toplevel.c:1032 jl_toplevel_eval_flex at /source/src/toplevel.c:972 ijl_toplevel_eval at /source/src/toplevel.c:1044 ijl_toplevel_eval_in at /source/src/toplevel.c:1089 eval at ./boot.jl:489 include_string at ./loading.jl:2861 _jl_invoke at /source/src/gf.c:3452 [inlined] ijl_apply_generic at /source/src/gf.c:3652 _include at ./loading.jl:2921 include at ./Base.jl:303 exec_options at ./client.jl:328 _start at ./client.jl:560 jfptr__start_60056.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3452 [inlined] ijl_apply_generic at /source/src/gf.c:3652 jl_apply at /source/src/julia.h:2347 [inlined] true_main at /source/src/jlapi.c:951 jl_repl_entrypoint at /source/src/jlapi.c:1111 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x7d774ed1e249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) Allocations: 22476471 (Pool: 22475947; Big: 524); GC: 27 PkgEval terminated after 2746.66s: test duration exceeded the time limit