Package evaluation of DecomposingPolynomialSystems on Julia 1.12.0-DEV.2126 (3761029c84*) started at 2025-03-25T15:12:51.381 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 8.87s ################################################################################ # Installation # Installing DecomposingPolynomialSystems... Resolving package versions... Installed TreeViews ──────────────────────── v0.3.0 Installed FLINT_jll ──────────────────────── v300.200.100+0 Installed LRUCache ───────────────────────── v1.6.2 Installed OffsetArrays ───────────────────── v1.16.0 Installed StatsFuns ──────────────────────── v1.3.2 Installed HypergeometricFunctions ────────── v0.3.28 Installed Preferences ────────────────────── v1.4.3 Installed MutableArithmetics ─────────────── v1.6.4 Installed PDMats ─────────────────────────── v0.11.32 Installed GAP_lib_jll ────────────────────── v400.1201.200+0 Installed ProgressMeter ──────────────────── v1.10.2 Installed Pidfile ────────────────────────── v1.3.0 Installed Multisets ──────────────────────── v0.4.5 Installed Permutations ───────────────────── v0.4.23 Installed OpenBLAS32_jll ─────────────────── v0.3.29+0 Installed DelimitedFiles ─────────────────── v1.9.1 Installed Statistics ─────────────────────── v1.11.1 Installed SymEngine_jll ──────────────────── v0.9.0+1 Installed Mods ───────────────────────────── v2.2.6 Installed HomotopyContinuation ───────────── v2.13.0 Installed StaticArrays ───────────────────── v1.9.13 Installed Polynomials ────────────────────── v4.0.19 Installed Static ─────────────────────────── v1.2.0 Installed GAP_jll ────────────────────────── v400.1200.200+9 Installed Missings ───────────────────────── v1.2.0 Installed SLEEFPirates ───────────────────── v0.6.43 Installed SIMDTypes ──────────────────────── v0.1.0 Installed IrrationalConstants ────────────── v0.2.4 Installed FiniteDiff ─────────────────────── v2.27.0 Installed Ncurses_jll ────────────────────── v6.5.1+0 Installed CpuId ──────────────────────────── v0.3.1 Installed PtrArrays ──────────────────────── v1.3.0 Installed MultivariatePolynomials ────────── v0.5.7 Installed AbstractLattices ───────────────── v0.3.1 Installed IfElse ─────────────────────────── v0.1.1 Installed SimpleRandom ───────────────────── v0.3.2 Installed NaNMath ────────────────────────── v1.1.2 Installed StaticArraysCore ───────────────── v1.4.3 Installed ADTypes ────────────────────────── v1.14.0 Installed ThreadingUtilities ─────────────── v0.5.2 Installed SpecialFunctions ───────────────── v2.5.0 Installed Rmath_jll ──────────────────────── v0.5.1+0 Installed SemialgebraicSets ──────────────── v0.3.3 Installed ManualMemory ───────────────────── v0.1.8 Installed NLSolversBase ──────────────────── v7.9.0 Installed CommonSubexpressions ───────────── v0.3.1 Installed DataStructures ─────────────────── v0.18.22 Installed MPC_jll ────────────────────────── v1.3.1+0 Installed CommonWorldInvalidations ───────── v1.0.0 Installed StatsAPI ───────────────────────── v1.7.0 Installed Compat ─────────────────────────── v4.16.0 Installed StaticArrayInterface ───────────── v1.8.0 Installed SimpleGraphs ───────────────────── v0.8.6 Installed DynamicPolynomials ─────────────── v0.6.1 Installed StatsBase ──────────────────────── v0.34.4 Installed BitTwiddlingConvenienceFunctions ─ v0.1.6 Installed Scratch ────────────────────────── v1.2.1 Installed SimplePartitions ───────────────── v0.3.3 Installed DiffRules ──────────────────────── v1.15.1 Installed GAP ────────────────────────────── v0.10.4 Installed LinearAlgebraX ─────────────────── v0.2.10 Installed LayoutPointers ─────────────────── v0.1.17 Installed TableTraits ────────────────────── v1.0.1 Installed Arblib ─────────────────────────── v1.3.0 Installed DiffResults ────────────────────── v1.1.0 Installed PositiveFactorizations ─────────── v0.2.4 Installed ProjectiveVectors ──────────────── v1.1.4 Installed JLLWrappers ────────────────────── v1.7.0 Installed DataValueInterfaces ────────────── v1.0.0 Installed Setfield ───────────────────────── v1.1.2 Installed ConstructionBase ───────────────── v1.5.8 Installed LoopVectorization ──────────────── v0.12.171 Installed PrettyTables ───────────────────── v2.4.0 Installed OrderedCollections ─────────────── v1.8.0 Installed Combinatorics ──────────────────── v1.0.2 Installed PolyesterWeave ─────────────────── v0.2.2 Installed ArrayInterface ─────────────────── v7.18.0 Installed Reexport ───────────────────────── v1.2.2 Installed LineSearches ───────────────────── v7.3.0 Installed ChainRulesCore ─────────────────── v1.25.1 Installed LogExpFunctions ────────────────── v0.3.29 Installed AliasTables ────────────────────── v1.1.3 Installed IntervalTrees ──────────────────── v1.1.0 Installed Readline_jll ───────────────────── v8.2.13+0 Installed CloseOpenIntervals ─────────────── v0.1.13 Installed GroupsCore ─────────────────────── v0.4.2 Installed OpenSpecFun_jll ────────────────── v0.5.6+0 Installed MacroTools ─────────────────────── v0.5.15 Installed UnPack ─────────────────────────── v1.0.2 Installed CommonSolve ────────────────────── v0.2.4 Installed Crayons ────────────────────────── v4.1.1 Installed RingLists ──────────────────────── v0.2.9 Installed RandomExtensions ───────────────── v0.4.4 Installed Adapt ──────────────────────────── v4.3.0 Installed DocStringExtensions ────────────── v0.9.3 Installed XML2_jll ───────────────────────── v2.13.6+1 Installed IntegerMathUtils ───────────────── v0.1.2 Installed Rmath ──────────────────────────── v0.8.0 Installed VectorizationBase ──────────────── v0.21.71 Installed CPUSummary ─────────────────────── v0.2.6 Installed IterTools ──────────────────────── v1.10.0 Installed Tables ─────────────────────────── v1.12.0 Installed DataAPI ────────────────────────── v1.16.0 Installed RecipesBase ────────────────────── v1.3.4 Installed Primes ─────────────────────────── v0.5.7 Installed DecomposingPolynomialSystems ───── v1.0.0 Installed PrecompileTools ────────────────── v1.2.1 Installed DifferentiationInterface ───────── v0.6.48 Installed Libiconv_jll ───────────────────── v1.18.0+0 Installed Optim ──────────────────────────── v1.11.0 Installed IteratorInterfaceExtensions ────── v1.0.0 Installed HostCPUFeatures ────────────────── v0.1.17 Installed StructArrays ───────────────────── v0.7.0 Installed LaTeXStrings ───────────────────── v1.4.0 Installed ForwardDiff ────────────────────── v0.10.38 Installed QuadGK ─────────────────────────── v2.11.2 Installed MixedSubdivisions ──────────────── v1.1.5 Installed FillArrays ─────────────────────── v1.13.0 Installed Requires ───────────────────────── v1.3.1 Installed GAP_pkg_juliainterface_jll ─────── v0.800.300+3 Installed LightXML ───────────────────────── v0.9.1 Installed Parameters ─────────────────────── v0.12.3 Installed ElasticArrays ──────────────────── v1.2.12 Installed StringManipulation ─────────────── v0.4.1 Installed SimplePolynomials ──────────────── v0.2.18 Installed SortingAlgorithms ──────────────── v1.2.1 Installed AbstractAlgebra ────────────────── v0.33.0 Installed Distributions ──────────────────── v0.25.118 Installing 14 artifacts Installed artifact Rmath 121.9 KiB Installed artifact MPC 209.8 KiB Installed artifact SymEngine 1.7 MiB Installed artifact GAP_pkg_juliainterface 66.3 KiB Installed artifact OpenSpecFun 194.9 KiB Installed artifact XML2 2.5 MiB Installed artifact Libiconv 1.9 MiB Installed artifact Readline 1.1 MiB Installed artifact Ncurses 1.0 MiB Installed artifact OpenBLAS32 10.0 MiB Installed artifact GAP 3.4 MiB Installed artifact FLINT 19.3 MiB Installed artifact GAP_lib 15.8 MiB Installed artifact gap_packages 448.4 MiB Updating `~/.julia/environments/v1.12/Project.toml` [f22b1612] + DecomposingPolynomialSystems v1.0.0 Updating `~/.julia/environments/v1.12/Manifest.toml` [47edcb42] + ADTypes v1.14.0 ⌅ [c3fe647b] + AbstractAlgebra v0.33.0 [398f06c4] + AbstractLattices v0.3.1 [79e6a3ab] + Adapt v4.3.0 [66dad0bd] + AliasTables v1.1.3 [fb37089c] + Arblib v1.3.0 [4fba245c] + ArrayInterface v7.18.0 [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 [2a0fbf3d] + CPUSummary v0.2.6 [d360d2e6] + ChainRulesCore v1.25.1 [fb6a15b2] + CloseOpenIntervals v0.1.13 [861a8166] + Combinatorics v1.0.2 [38540f10] + CommonSolve v0.2.4 [bbf7d656] + CommonSubexpressions v0.3.1 [f70d9fcc] 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[deac9b47] + LibCURL_jll v8.11.1+1 [e37daf67] + LibGit2_jll v1.9.0+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [3a97d323] + MPFR_jll v4.2.1+2 [14a3606d] + MozillaCACerts_jll v2024.12.31 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.5+0 [458c3c95] + OpenSSL_jll v3.0.16+0 [bea87d4a] + SuiteSparse_jll v7.8.3+2 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.12.0+0 [8e850ede] + nghttp2_jll v1.64.0+1 [3f19e933] + p7zip_jll v17.5.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 113.91s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... 6945.9 ms ✓ TestEnv 1 dependency successfully precompiled in 9 seconds. 25 already precompiled. Precompiling package dependencies... ERROR: LoadError: The following 1 direct dependency failed to precompile: DecomposingPolynomialSystems Failed to precompile DecomposingPolynomialSystems [f22b1612-9f73-4f98-889e-ed5396e1a4da] to "/home/pkgeval/.julia/compiled/v1.12/DecomposingPolynomialSystems/jl_COcMqq". /opt/julia/bin/julia: symbol lookup error: /home/pkgeval/.julia/artifacts/25ba2c3f606ffb19948ac2cde2f774abe3b2d3b7/lib/libgap.so: undefined symbol: jl_task_stack_buffer, version JL_LIBJULIA_1.1 in expression starting at /PkgEval.jl/scripts/precompile.jl:37 Precompilation failed after 731.02s ################################################################################ # Testing # Testing DecomposingPolynomialSystems Status `/tmp/jl_RuR81t/Project.toml` [f22b1612] DecomposingPolynomialSystems v1.0.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_RuR81t/Manifest.toml` [47edcb42] ADTypes v1.14.0 ⌅ [c3fe647b] AbstractAlgebra v0.33.0 [398f06c4] AbstractLattices v0.3.1 [79e6a3ab] Adapt v4.3.0 [66dad0bd] AliasTables v1.1.3 [fb37089c] Arblib v1.3.0 [4fba245c] ArrayInterface v7.18.0 [62783981] BitTwiddlingConvenienceFunctions v0.1.6 [2a0fbf3d] CPUSummary v0.2.6 [d360d2e6] ChainRulesCore v1.25.1 [fb6a15b2] CloseOpenIntervals v0.1.13 [861a8166] Combinatorics v1.0.2 [38540f10] CommonSolve v0.2.4 [bbf7d656] CommonSubexpressions v0.3.1 [f70d9fcc] CommonWorldInvalidations v1.0.0 [34da2185] Compat v4.16.0 [187b0558] ConstructionBase v1.5.8 [adafc99b] CpuId v0.3.1 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [f22b1612] DecomposingPolynomialSystems v1.0.0 [8bb1440f] DelimitedFiles v1.9.1 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [a0c0ee7d] DifferentiationInterface v0.6.48 [31c24e10] Distributions v0.25.118 [ffbed154] DocStringExtensions v0.9.3 [7c1d4256] DynamicPolynomials v0.6.1 [fdbdab4c] ElasticArrays v1.2.12 [1a297f60] FillArrays v1.13.0 [6a86dc24] FiniteDiff v2.27.0 [f6369f11] ForwardDiff v0.10.38 ⌅ [c863536a] GAP 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GMP_jll v6.3.0+2 [deac9b47] LibCURL_jll v8.11.1+1 [e37daf67] LibGit2_jll v1.9.0+0 [29816b5a] LibSSH2_jll v1.11.3+1 [3a97d323] MPFR_jll v4.2.1+2 [14a3606d] MozillaCACerts_jll v2024.12.31 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.5+0 [458c3c95] OpenSSL_jll v3.0.16+0 [bea87d4a] SuiteSparse_jll v7.8.3+2 [83775a58] Zlib_jll v1.3.1+2 [8e850b90] libblastrampoline_jll v5.12.0+0 [8e850ede] nghttp2_jll v1.64.0+1 [3f19e933] p7zip_jll v17.5.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Precompiling packages... Info Given DecomposingPolynomialSystems was explicitly requested, output will be shown live  WARNING: llvmcall with integer pointers is deprecated. Use actual pointers instead, replacing i32 or i64 with i8* or ptr in initialize_task(Any) at /home/pkgeval/.julia/packages/ThreadingUtilities/3z3g0/src/ThreadingUtilities.jl /opt/julia/bin/julia: symbol lookup error: /home/pkgeval/.julia/artifacts/25ba2c3f606ffb19948ac2cde2f774abe3b2d3b7/lib/libgap.so: undefined symbol: jl_task_stack_buffer, version JL_LIBJULIA_1.12 ✗ DecomposingPolynomialSystems 0 dependencies successfully precompiled in 29 seconds. 209 already precompiled. ERROR: LoadError: The following 1 direct dependency failed to precompile: DecomposingPolynomialSystems Failed to precompile DecomposingPolynomialSystems [f22b1612-9f73-4f98-889e-ed5396e1a4da] to "/home/pkgeval/.julia/compiled/v1.12/DecomposingPolynomialSystems/jl_o51W0V". WARNING: llvmcall with integer pointers is deprecated. Use actual pointers instead, replacing i32 or i64 with i8* or ptr in initialize_task(Any) at /home/pkgeval/.julia/packages/ThreadingUtilities/3z3g0/src/ThreadingUtilities.jl /opt/julia/bin/julia: symbol lookup error: /home/pkgeval/.julia/artifacts/25ba2c3f606ffb19948ac2cde2f774abe3b2d3b7/lib/libgap.so: undefined symbol: jl_task_stack_buffer, version JL_LIBJULIA_1.1 in expression starting at /home/pkgeval/.julia/packages/DecomposingPolynomialSystems/eBXd9/test/runtests.jl:1 Testing failed after 38.67s ERROR: LoadError: Package DecomposingPolynomialSystems errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2365 [3] test @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2220 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:486 [5] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:164 [6] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:152 [7] test @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:152 [inlined] [8] #test#81 @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:151 [inlined] [9] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 [10] include(mod::Module, _path::String) @ Base ./Base.jl:303 [11] exec_options(opts::Base.JLOptions) @ Base ./client.jl:328 [12] _start() @ Base ./client.jl:560 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 948.27s: package fails to precompile