Package evaluation of DECAES on Julia 1.12.0-DEV.2126 (3761029c84*) started at 2025-03-25T14:25:45.044 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 9.35s ################################################################################ # Installation # Installing DECAES... Resolving package versions... Installed libaec_jll ─────────── v1.1.3+0 Installed MPICH_jll ──────────── v4.3.0+1 Installed NLopt_jll ──────────── v2.10.0+0 Installed MuladdMacro ────────── v0.2.4 Installed IrrationalConstants ── v0.2.4 Installed AxisArrays ─────────── v0.4.7 Installed DiffRules ──────────── v1.15.1 Installed Scratch ────────────── v1.2.1 Installed XML2_jll ───────────── v2.13.6+1 Installed NLopt ──────────────── v1.1.3 Installed Dierckx ────────────── v0.5.4 Installed IntervalSets ───────── v0.7.10 Installed IterTools ──────────── v1.10.0 Installed DiffResults ────────── v1.1.0 Installed LoggingExtras ──────── v1.1.0 Installed Preferences ────────── v1.4.3 Installed Hwloc_jll ──────────── v2.12.0+0 Installed Dierckx_jll ────────── v0.2.0+0 Installed JLLWrappers ────────── v1.7.0 Installed MicrosoftMPI_jll ───── v10.1.4+3 Installed OpenMPI_jll ────────── v5.0.7+1 Installed ProgressMeter ──────── v1.10.2 Installed SpecialFunctions ───── v2.5.0 Installed StaticArraysCore ───── v1.4.3 Installed StaticArrays ───────── v1.9.13 Installed Libiconv_jll ───────── v1.18.0+0 Installed NaNMath ────────────── v1.1.2 Installed OrderedCollections ─── v1.8.0 Installed PrecompileTools ────── v1.2.1 Installed NIfTI ──────────────── v0.6.1 Installed TranscodingStreams ─── v0.9.13 Installed MPIPreferences ─────── v0.1.11 Installed CEnum ──────────────── v0.5.0 Installed ForwardDiff ────────── v0.10.38 Installed UnsafeArrays ───────── v1.0.7 Installed MPItrampoline_jll ──── v5.5.3+0 Installed Statistics ─────────── v1.11.1 Installed CommonSubexpressions ─ v0.3.1 Installed MAT ────────────────── v0.10.7 Installed LogExpFunctions ────── v0.3.29 Installed MappedArrays ───────── v0.4.2 Installed Requires ───────────── v1.3.1 Installed BufferedStreams ────── v1.2.2 Installed RangeArrays ────────── v0.3.2 Installed MacroTools ─────────── v0.5.15 Installed Compat ─────────────── v4.16.0 Installed OpenSpecFun_jll ────── v0.5.6+0 Installed ParXRec ────────────── v0.2.0 Installed HDF5 ───────────────── v0.17.2 Installed UnPack ─────────────── v1.0.2 Installed Parameters ─────────── v0.12.3 Installed LightXML ───────────── v0.9.1 Installed CodecZlib ──────────── v0.7.8 Installed TupleTools ─────────── v1.6.0 Installed DocStringExtensions ── v0.9.3 Installed HDF5_jll ───────────── v1.14.6+0 Installed TextWrap ───────────── v1.0.2 Installed ArgParse ───────────── v1.2.0 Installed DECAES ─────────────── v0.6.0 Installing 9 artifacts Installed artifact OpenSpecFun 194.9 KiB Installed artifact XML2 2.5 MiB Installed artifact Hwloc 3.5 MiB Installed artifact libaec 96.2 KiB Installed artifact MPICH 3.3 MiB Installed artifact Dierckx 149.2 KiB Installed artifact NLopt 322.7 KiB Installed artifact HDF5 5.7 MiB Installed artifact Libiconv 1.9 MiB Updating `~/.julia/environments/v1.12/Project.toml` [d84fb938] + DECAES v0.6.0 Updating `~/.julia/environments/v1.12/Manifest.toml` [c7e460c6] + ArgParse v1.2.0 [39de3d68] + AxisArrays v0.4.7 [e1450e63] + BufferedStreams v1.2.2 [fa961155] + CEnum v0.5.0 [944b1d66] + CodecZlib v0.7.8 [bbf7d656] + CommonSubexpressions v0.3.1 [34da2185] + Compat v4.16.0 [d84fb938] + DECAES v0.6.0 [39dd38d3] + Dierckx v0.5.4 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [ffbed154] + DocStringExtensions v0.9.3 [f6369f11] + ForwardDiff v0.10.38 [f67ccb44] + HDF5 v0.17.2 [8197267c] + IntervalSets v0.7.10 [92d709cd] + IrrationalConstants v0.2.4 [c8e1da08] + IterTools v1.10.0 [692b3bcd] + JLLWrappers v1.7.0 [9c8b4983] + LightXML v0.9.1 [2ab3a3ac] + LogExpFunctions v0.3.29 [e6f89c97] + LoggingExtras v1.1.0 [23992714] + MAT v0.10.7 [3da0fdf6] + MPIPreferences v0.1.11 [1914dd2f] + MacroTools v0.5.15 [dbb5928d] + MappedArrays v0.4.2 [46d2c3a1] + MuladdMacro v0.2.4 [a3a9e032] + NIfTI v0.6.1 [76087f3c] + NLopt v1.1.3 [77ba4419] + NaNMath v1.1.2 [bac558e1] + OrderedCollections v1.8.0 [ce505a99] + ParXRec v0.2.0 [d96e819e] + Parameters v0.12.3 [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.4.3 [92933f4c] + ProgressMeter v1.10.2 [b3c3ace0] + RangeArrays v0.3.2 [ae029012] + Requires v1.3.1 [6c6a2e73] + Scratch v1.2.1 [276daf66] + SpecialFunctions v2.5.0 [90137ffa] + StaticArrays v1.9.13 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [b718987f] + TextWrap v1.0.2 ⌅ [3bb67fe8] + TranscodingStreams v0.9.13 [9d95972d] + TupleTools v1.6.0 [3a884ed6] + UnPack v1.0.2 [c4a57d5a] + UnsafeArrays v1.0.7 [cd4c43a9] + Dierckx_jll v0.2.0+0 [0234f1f7] + HDF5_jll v1.14.6+0 [e33a78d0] + Hwloc_jll v2.12.0+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [7cb0a576] + MPICH_jll v4.3.0+1 [f1f71cc9] + MPItrampoline_jll v5.5.3+0 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 [079eb43e] + NLopt_jll v2.10.0+0 [fe0851c0] + OpenMPI_jll v5.0.7+1 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [02c8fc9c] + XML2_jll v2.13.6+1 [477f73a3] + libaec_jll v1.1.3+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.6.0 [7b1f6079] + FileWatching v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.12.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.11.1+1 [e37daf67] + LibGit2_jll v1.9.0+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2024.12.31 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.5+0 [458c3c95] + OpenSSL_jll v3.0.16+0 [bea87d4a] + SuiteSparse_jll v7.8.3+2 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.12.0+0 [8e850ede] + nghttp2_jll v1.64.0+1 [3f19e933] + p7zip_jll v17.5.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Building DECAES → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/7d21f52bd7d8a6a7565df2d8ee2a9ceb0f59554d/build.log` Installation completed after 841.76s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... 6580.6 ms ✓ TestEnv 1 dependency successfully precompiled in 9 seconds. 25 already precompiled. Precompiling package dependencies... Precompilation completed after 423.87s ################################################################################ # Testing # Testing DECAES Status `/tmp/jl_AXfrGU/Project.toml` [4c88cf16] Aqua v0.8.11 [c7e460c6] ArgParse v1.2.0 [d84fb938] DECAES v0.6.0 [39dd38d3] Dierckx v0.5.4 [ffbed154] DocStringExtensions v0.9.3 [497a8b3b] DoubleFloats v1.4.2 [f6369f11] ForwardDiff v0.10.38 [e6f89c97] LoggingExtras v1.1.0 [23992714] MAT v0.10.7 ⌅ [10e44e05] MATLAB v0.8.4 [46d2c3a1] MuladdMacro v0.2.4 [a3a9e032] NIfTI v0.6.1 [76087f3c] NLopt v1.1.3 [ce505a99] ParXRec v0.2.0 [d96e819e] Parameters v0.12.3 [3a141323] PolynomialRoots v1.0.0 [aea7be01] PrecompileTools v1.2.1 [92933f4c] ProgressMeter v1.10.2 [6c6a2e73] Scratch v1.2.1 [276daf66] SpecialFunctions v2.5.0 [90137ffa] StaticArrays v1.9.13 [10745b16] Statistics v1.11.1 [9d95972d] TupleTools v1.6.0 [c4a57d5a] UnsafeArrays v1.0.7 [ade2ca70] Dates v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [56ddb016] Logging v1.11.0 [44cfe95a] Pkg v1.12.0 [9a3f8284] Random v1.11.0 [fa267f1f] TOML v1.0.3 [8dfed614] Test v1.11.0 Status `/tmp/jl_AXfrGU/Manifest.toml` [4c88cf16] Aqua v0.8.11 [c7e460c6] ArgParse v1.2.0 [39de3d68] AxisArrays v0.4.7 [e1450e63] BufferedStreams v1.2.2 [fa961155] CEnum v0.5.0 [944b1d66] CodecZlib v0.7.8 [bbf7d656] CommonSubexpressions v0.3.1 [34da2185] Compat v4.16.0 [187b0558] ConstructionBase v1.5.8 [d84fb938] DECAES v0.6.0 [39dd38d3] Dierckx v0.5.4 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [ffbed154] DocStringExtensions v0.9.3 [497a8b3b] DoubleFloats v1.4.2 [f6369f11] ForwardDiff v0.10.38 [14197337] GenericLinearAlgebra v0.3.15 [f67ccb44] HDF5 v0.17.2 [8197267c] IntervalSets v0.7.10 [92d709cd] IrrationalConstants v0.2.4 [c8e1da08] IterTools v1.10.0 [692b3bcd] JLLWrappers v1.7.0 [9c8b4983] LightXML v0.9.1 [2ab3a3ac] LogExpFunctions v0.3.29 [e6f89c97] LoggingExtras v1.1.0 [23992714] MAT v0.10.7 ⌅ [10e44e05] MATLAB v0.8.4 [3da0fdf6] MPIPreferences v0.1.11 [1914dd2f] MacroTools v0.5.15 [dbb5928d] MappedArrays v0.4.2 [46d2c3a1] MuladdMacro v0.2.4 [a3a9e032] NIfTI v0.6.1 [76087f3c] NLopt v1.1.3 [77ba4419] NaNMath v1.1.2 [bac558e1] OrderedCollections v1.8.0 [ce505a99] ParXRec v0.2.0 [d96e819e] Parameters v0.12.3 [3a141323] PolynomialRoots v1.0.0 [f27b6e38] Polynomials v4.0.19 [aea7be01] PrecompileTools v1.2.1 [21216c6a] Preferences v1.4.3 [92933f4c] ProgressMeter v1.10.2 [be4d8f0f] Quadmath v0.5.11 [b3c3ace0] RangeArrays v0.3.2 [3cdcf5f2] RecipesBase v1.3.4 [ae029012] Requires v1.3.1 [6c6a2e73] Scratch v1.2.1 [efcf1570] Setfield v1.1.2 [276daf66] SpecialFunctions v2.5.0 [90137ffa] StaticArrays v1.9.13 [1e83bf80] StaticArraysCore v1.4.3 [10745b16] Statistics v1.11.1 [b718987f] TextWrap v1.0.2 ⌅ [3bb67fe8] TranscodingStreams v0.9.13 [9d95972d] TupleTools v1.6.0 [3a884ed6] UnPack v1.0.2 [c4a57d5a] UnsafeArrays v1.0.7 [cd4c43a9] Dierckx_jll v0.2.0+0 [0234f1f7] HDF5_jll v1.14.6+0 [e33a78d0] Hwloc_jll v2.12.0+0 [94ce4f54] Libiconv_jll v1.18.0+0 [7cb0a576] MPICH_jll v4.3.0+1 [f1f71cc9] MPItrampoline_jll v5.5.3+0 [9237b28f] MicrosoftMPI_jll v10.1.4+3 [079eb43e] NLopt_jll v2.10.0+0 [fe0851c0] OpenMPI_jll v5.0.7+1 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [02c8fc9c] XML2_jll v2.13.6+1 [477f73a3] libaec_jll v1.1.3+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.6.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.12.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.12.0 [f489334b] StyledStrings v1.11.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.11.1+1 [e37daf67] LibGit2_jll v1.9.0+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2024.12.31 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.5+0 [458c3c95] OpenSSL_jll v3.0.16+0 [bea87d4a] SuiteSparse_jll v7.8.3+2 [83775a58] Zlib_jll v1.3.1+2 [8e850b90] libblastrampoline_jll v5.12.0+0 [8e850ede] nghttp2_jll v1.64.0+1 [3f19e933] p7zip_jll v17.5.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Test Summary: | Pass Total Time misc.jl | 12 12 24.8s version numbers | 10 10 1.5s cli script | 2 2 21.6s Test Summary: | Pass Total Time nhs.jl | 824 824 2m14.9s NormalHermiteSplines.jl | 824 824 2m11.4s Test Summary: | Pass Total Time utils.jl | 9248 9248 7.5s GrowableCache | 13 13 0.5s GrowableCachePairs | 8 8 4.7s CachedFunction | 10 10 0.1s MappedArray | 4 4 0.4s SVDValsWorkspace | 150 150 0.0s split_indices | 9063 9063 0.5s Test Summary: | Pass Total Time optimization.jl | 15 15 0.8s bisect_root | 3 3 0.2s brent_root | 3 3 0.1s newton_bisect_root | 3 3 0.1s brent_minimize | 2 2 0.1s brent_newton_minimize | 4 4 0.2s Test Summary: | Pass Total Time splines.jl | 20722 20722 58.0s Splines | 20722 20722 57.1s Test Summary: | Pass Total Time nnls.jl | 39474 39474 3m30.6s NNLS | 12644 12644 5.2s NNLS Tikh | 12613 12613 0.1s lcurve_corner | 3 3 1.5s lsqnonneg_lcurve | 64 64 0.0s lsqnonneg_chi2 | 522 522 0.0s lsqnonneg_gcv | 396 396 0.6s lsqnonneg_mdp | 256 256 0.0s least-squares gradients | 576 576 1.3s NNLSTikhonovRegProblem | 7600 7600 1.7s NNLSTikhonovRegProblemCache | 4800 4800 1.2s EPGFunctor: Test Failed at /home/pkgeval/.julia/packages/DECAES/l29DC/test/epg.jl:76 Expression: #= /home/pkgeval/.julia/packages/DECAES/l29DC/test/epg.jl:76 =# @allocated(jac!(J, y, θ)) == 0 Evaluated: 48 == 0 Stacktrace: [1] macro expansion @ /opt/julia/share/julia/stdlib/v1.12/Test/src/Test.jl:679 [inlined] [2] test_EPGFunctor() @ Main ~/.julia/packages/DECAES/l29DC/test/epg.jl:76 [3] top-level scope @ ~/.julia/packages/DECAES/l29DC/test/epg.jl:1766 [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.12/Test/src/Test.jl:1771 [inlined] [5] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:304 [6] top-level scope @ ~/.julia/packages/DECAES/l29DC/test/runtests.jl:90 [7] macro expansion @ /opt/julia/share/julia/stdlib/v1.12/Test/src/Test.jl:1771 [inlined] [8] macro expansion @ ~/.julia/packages/DECAES/l29DC/test/runtests.jl:90 [inlined] [9] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:304 [10] top-level scope @ none:6 [11] eval(m::Module, e::Any) @ Core ./boot.jl:489 [12] exec_options(opts::Base.JLOptions) @ Base ./client.jl:294 [13] _start() @ Base ./client.jl:560 Test Summary: | Pass Fail Total Time epg.jl | 193 1 194 1m01.0s EPG algorithms | 178 178 47.7s EPGOptions | 6 6 1.0s EPGFunctor | 9 1 10 12.2s RNG of the outermost testset: Xoshiro(0x9484aa5e8c3ae7f0, 0x143c62f7f3880760, 0x293af373a29ed584, 0xdd0ac6acdba43a58, 0xaaac0342956ac20c) ERROR: LoadError: Some tests did not pass: 193 passed, 1 failed, 0 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/DECAES/l29DC/test/runtests.jl:89 Testing failed after 538.51s ERROR: LoadError: Package DECAES errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2365 [3] test @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2220 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:486 [5] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:164 [6] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:152 [7] test @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:152 [inlined] [8] #test#81 @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:151 [inlined] [9] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 [10] include(mod::Module, _path::String) @ Base ./Base.jl:303 [11] exec_options(opts::Base.JLOptions) @ Base ./client.jl:328 [12] _start() @ Base ./client.jl:560 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 1858.07s: package has test failures