Package evaluation of OceanTurb on Julia 1.11.5 (32ac370b68*) started at 2025-06-29T09:11:34.373 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 8.7s ################################################################################ # Installation # Installing OceanTurb... Resolving package versions... Installed Conda ── v1.10.2 Installed PyCall ─ v1.96.4 Updating `~/.julia/environments/v1.11/Project.toml` [d848d694] + OceanTurb v0.3.4 Updating `~/.julia/environments/v1.11/Manifest.toml` [8f4d0f93] + Conda v1.10.2 [682c06a0] + JSON v0.21.4 [1914dd2f] + MacroTools v0.5.16 [d848d694] + OceanTurb v0.3.4 [6fe1bfb0] + OffsetArrays v1.17.0 [69de0a69] + Parsers v2.8.3 ⌅ [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.4.3 [438e738f] + PyCall v1.96.4 [90137ffa] + StaticArrays v1.9.13 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [81def892] + VersionParsing v1.3.0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [ade2ca70] + Dates v1.11.0 [f43a241f] + Downloads v1.6.0 [7b1f6079] + FileWatching v1.11.0 [b27032c2] + LibCURL v0.6.4 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.2.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [fa267f1f] + TOML v1.0.3 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] + LibCURL_jll v8.6.0+0 [29816b5a] + LibSSH2_jll v1.11.0+1 [c8ffd9c3] + MbedTLS_jll v2.28.6+0 [14a3606d] + MozillaCACerts_jll v2023.12.12 [4536629a] + OpenBLAS_jll v0.3.27+1 [83775a58] + Zlib_jll v1.2.13+1 [8e850b90] + libblastrampoline_jll v5.11.0+0 [8e850ede] + nghttp2_jll v1.59.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Building Conda ─→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/b19db3927f0db4151cb86d073689f2428e524576/build.log` Building PyCall → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/9816a3826b0ebf49ab4926e2b18842ad8b5c8f04/build.log` Installation completed after 66.98s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 21.77s ################################################################################ # Testing # Testing OceanTurb Status `/tmp/jl_QAb7sH/Project.toml` [a2441757] Coverage v1.6.1 [d848d694] OceanTurb v0.3.4 [6fe1bfb0] OffsetArrays v1.17.0 [438e738f] PyCall v1.96.4 [90137ffa] StaticArrays v1.9.13 [10745b16] Statistics v1.11.1 [37e2e46d] LinearAlgebra v1.11.0 [de0858da] Printf v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_QAb7sH/Manifest.toml` [d1d4a3ce] BitFlags v0.1.9 [944b1d66] CodecZlib v0.7.8 [f0e56b4a] ConcurrentUtilities v2.5.0 [8f4d0f93] Conda v1.10.2 [a2441757] Coverage v1.6.1 [c36e975a] CoverageTools v1.3.2 [460bff9d] ExceptionUnwrapping v0.1.11 [cd3eb016] HTTP v1.10.17 [692b3bcd] JLLWrappers v1.7.0 [682c06a0] JSON v0.21.4 [e6f89c97] LoggingExtras v1.1.0 [1914dd2f] MacroTools v0.5.16 [739be429] MbedTLS v1.1.9 [d848d694] OceanTurb v0.3.4 [6fe1bfb0] OffsetArrays v1.17.0 [4d8831e6] OpenSSL v1.5.0 [69de0a69] Parsers v2.8.3 ⌅ [aea7be01] PrecompileTools v1.2.1 [21216c6a] Preferences v1.4.3 [438e738f] PyCall v1.96.4 [777ac1f9] SimpleBufferStream v1.2.0 [90137ffa] StaticArrays v1.9.13 [1e83bf80] StaticArraysCore v1.4.3 [10745b16] Statistics v1.11.1 [3bb67fe8] TranscodingStreams v0.11.3 [5c2747f8] URIs v1.6.1 [81def892] VersionParsing v1.3.0 [458c3c95] OpenSSL_jll v3.5.0+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [f43a241f] Downloads v1.6.0 [7b1f6079] FileWatching v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.11.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.2.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [fa267f1f] TOML v1.0.3 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] LibCURL_jll v8.6.0+0 [e37daf67] LibGit2_jll v1.7.2+0 [29816b5a] LibSSH2_jll v1.11.0+1 [c8ffd9c3] MbedTLS_jll v2.28.6+0 [14a3606d] MozillaCACerts_jll v2023.12.12 [4536629a] OpenBLAS_jll v0.3.27+1 [83775a58] Zlib_jll v1.2.13+1 [8e850b90] libblastrampoline_jll v5.11.0+0 [8e850ede] nghttp2_jll v1.59.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Test Summary: | Pass Total Time Utils | 5 5 3.3s Test Summary: | Pass Total Time Solvers | 2 2 3.8s Test Summary: | Pass Total Time Grids | 18 18 1.0s Test Summary: | Pass Total Time Fields | 24 24 2.2s WARNING: Method definition test_diffusive_flux() in module Main at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_utils.jl:16 overwritten at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_diffusion.jl:17. Test Summary: | Pass Total Time Diffusion | 14 14 5.5s Test Summary: | Pass Total Time Pacanowski-Philander | 2 2 2.3s Test Summary: | Pass Total Time KPP | 51 51 26.6s Test Summary: | Pass Total Time Modular KPP | 17 17 50.2s WARNING: Method definition test_default_model_init() in module Main at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_modularkpp.jl:5 overwritten at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:5. WARNING: Method definition test_default_model_init(Any) in module Main at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_modularkpp.jl:5 overwritten at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:5. WARNING: Method definition test_default_model_init(Any, Any) in module Main at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_modularkpp.jl:5 overwritten at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:5. TKEMassFlux tests begin: testing... OK testing... OK TKEMassFlux: Error During Test at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 Test threw exception Expression: time_step_tke_mass_flux_model(boundary_layer_depth, mixing_length, nonlocal_flux, tke_equation, wall_model, eddy_diffusivity_model) BoundsError: attempt to access 6-element OffsetArray(::Vector{Float64}, 0:5) with eltype Float64 with indices 0:5 at index [6] Stacktrace: [1] throw_boundserror(A::OffsetArrays.OffsetVector{Float64, Vector{Float64}}, I::Tuple{Int64}) @ Base ./essentials.jl:14 [2] checkbounds @ ./abstractarray.jl:699 [inlined] [3] getindex @ ~/.julia/packages/OffsetArrays/b7qpm/src/OffsetArrays.jl:434 [inlined] [4] ∂z @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:361 [inlined] [5] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/KPP.jl:159 [inlined] [6] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/TKEMassFlux.jl:29 [inlined] [7] Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:111 [inlined] [8] oncell @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:461 [inlined] [9] cell_Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:115 [inlined] [10] Cᴷu @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:121 [inlined] [11] KU @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:5 [inlined] [12] #43 @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:157 [inlined] [13] macro expansion @ ./ntuple.jl:72 [inlined] [14] ntuple @ ./ntuple.jl:69 [inlined] [15] update!(solution::OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, m::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, Nothing, Nothing, OceanTurb.TKEMassFlux.TKEParameters{Float64}, Nothing, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, eqn::Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, bcs::@NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:151 [16] update! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:162 [inlined] [17] time_step! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:269 [inlined] [18] time_step!(model::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, Nothing, Nothing, OceanTurb.TKEMassFlux.TKEParameters{Float64}, Nothing, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, Δt::Float64, Nt::Int64) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:18 [19] time_step_tke_mass_flux_model(boundary_layer_depth::Nothing, mixing_length::OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, nonlocal_flux::Nothing, tke_equation::OceanTurb.TKEMassFlux.TKEParameters{Float64}, tke_wall_model::Nothing, eddy_diffusivities::OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}) @ Main ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:21 [20] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [21] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:677 [inlined] [22] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [23] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [24] top-level scope @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:61 testing... OK testing... OK testing... OK TKEMassFlux: Error During Test at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 Test threw exception Expression: time_step_tke_mass_flux_model(boundary_layer_depth, mixing_length, nonlocal_flux, tke_equation, wall_model, eddy_diffusivity_model) BoundsError: attempt to access 6-element OffsetArray(::Vector{Float64}, 0:5) with eltype Float64 with indices 0:5 at index [6] Stacktrace: [1] throw_boundserror(A::OffsetArrays.OffsetVector{Float64, Vector{Float64}}, I::Tuple{Int64}) @ Base ./essentials.jl:14 [2] checkbounds @ ./abstractarray.jl:699 [inlined] [3] getindex @ ~/.julia/packages/OffsetArrays/b7qpm/src/OffsetArrays.jl:434 [inlined] [4] ∂z @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:361 [inlined] [5] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/KPP.jl:159 [inlined] [6] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/TKEMassFlux.jl:29 [inlined] [7] Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:111 [inlined] [8] oncell @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:461 [inlined] [9] cell_Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:115 [inlined] [10] Cᴷu @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:121 [inlined] [11] KU @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:5 [inlined] [12] #43 @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:157 [inlined] [13] macro expansion @ ./ntuple.jl:72 [inlined] [14] ntuple @ ./ntuple.jl:69 [inlined] [15] update!(solution::OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, m::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedNearWallTKE{Float64}, Nothing, OceanTurb.TKEMassFlux.TKEParameters{Float64}, Nothing, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, eqn::Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, bcs::@NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:151 [16] update! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:162 [inlined] [17] time_step! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:269 [inlined] [18] time_step!(model::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedNearWallTKE{Float64}, Nothing, OceanTurb.TKEMassFlux.TKEParameters{Float64}, Nothing, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, Δt::Float64, Nt::Int64) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:18 [19] time_step_tke_mass_flux_model(boundary_layer_depth::Nothing, mixing_length::OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, nonlocal_flux::Nothing, tke_equation::OceanTurb.TKEMassFlux.TKEParameters{Float64}, tke_wall_model::OceanTurb.TKEMassFlux.PrescribedNearWallTKE{Float64}, eddy_diffusivities::OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}) @ Main ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:21 [20] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [21] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:677 [inlined] [22] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [23] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [24] top-level scope @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:61 testing... OK testing... OK testing... OK TKEMassFlux: Error During Test at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 Test threw exception Expression: time_step_tke_mass_flux_model(boundary_layer_depth, mixing_length, nonlocal_flux, tke_equation, wall_model, eddy_diffusivity_model) BoundsError: attempt to access 6-element OffsetArray(::Vector{Float64}, 0:5) with eltype Float64 with indices 0:5 at index [6] Stacktrace: [1] throw_boundserror(A::OffsetArrays.OffsetVector{Float64, Vector{Float64}}, I::Tuple{Int64}) @ Base ./essentials.jl:14 [2] checkbounds @ ./abstractarray.jl:699 [inlined] [3] getindex @ ~/.julia/packages/OffsetArrays/b7qpm/src/OffsetArrays.jl:434 [inlined] [4] ∂z @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:361 [inlined] [5] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/KPP.jl:159 [inlined] [6] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/TKEMassFlux.jl:29 [inlined] [7] Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:111 [inlined] [8] oncell @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:461 [inlined] [9] cell_Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:115 [inlined] [10] Cᴷu @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:121 [inlined] [11] KU @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:5 [inlined] [12] #43 @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:157 [inlined] [13] macro expansion @ ./ntuple.jl:72 [inlined] [14] ntuple @ ./ntuple.jl:69 [inlined] [15] update!(solution::OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, m::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedSurfaceTKEValue{Float64}, Nothing, OceanTurb.TKEMassFlux.TKEParameters{Float64}, Nothing, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, eqn::Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, bcs::@NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:151 [16] update! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:162 [inlined] [17] time_step! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:269 [inlined] [18] time_step!(model::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedSurfaceTKEValue{Float64}, Nothing, OceanTurb.TKEMassFlux.TKEParameters{Float64}, Nothing, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, Δt::Float64, Nt::Int64) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:18 [19] time_step_tke_mass_flux_model(boundary_layer_depth::Nothing, mixing_length::OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, nonlocal_flux::Nothing, tke_equation::OceanTurb.TKEMassFlux.TKEParameters{Float64}, tke_wall_model::OceanTurb.TKEMassFlux.PrescribedSurfaceTKEValue{Float64}, eddy_diffusivities::OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}) @ Main ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:21 [20] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [21] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:677 [inlined] [22] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [23] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [24] top-level scope @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:61 testing... OK testing... OK testing... OK TKEMassFlux: Error During Test at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 Test threw exception Expression: time_step_tke_mass_flux_model(boundary_layer_depth, mixing_length, nonlocal_flux, tke_equation, wall_model, eddy_diffusivity_model) BoundsError: attempt to access 6-element OffsetArray(::Vector{Float64}, 0:5) with eltype Float64 with indices 0:5 at index [6] Stacktrace: [1] throw_boundserror(A::OffsetArrays.OffsetVector{Float64, Vector{Float64}}, I::Tuple{Int64}) @ Base ./essentials.jl:14 [2] checkbounds @ ./abstractarray.jl:699 [inlined] [3] getindex @ ~/.julia/packages/OffsetArrays/b7qpm/src/OffsetArrays.jl:434 [inlined] [4] ∂z @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:361 [inlined] [5] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/KPP.jl:159 [inlined] [6] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/TKEMassFlux.jl:29 [inlined] [7] Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:111 [inlined] [8] oncell @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:461 [inlined] [9] cell_Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:115 [inlined] [10] Cᴷu @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:121 [inlined] [11] KU @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:5 [inlined] [12] #43 @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:157 [inlined] [13] macro expansion @ ./ntuple.jl:72 [inlined] [14] ntuple @ ./ntuple.jl:69 [inlined] [15] update!(solution::OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, m::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedSurfaceTKEFlux{Float64}, Nothing, OceanTurb.TKEMassFlux.TKEParameters{Float64}, Nothing, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, typeof(OceanTurb.TKEMassFlux.prescribed_surface_tke_flux)}}}, Float64}, eqn::Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, bcs::@NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, typeof(OceanTurb.TKEMassFlux.prescribed_surface_tke_flux)}}}) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:151 [16] update! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:162 [inlined] [17] time_step! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:269 [inlined] [18] time_step!(model::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedSurfaceTKEFlux{Float64}, Nothing, OceanTurb.TKEMassFlux.TKEParameters{Float64}, Nothing, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, typeof(OceanTurb.TKEMassFlux.prescribed_surface_tke_flux)}}}, Float64}, Δt::Float64, Nt::Int64) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:18 [19] time_step_tke_mass_flux_model(boundary_layer_depth::Nothing, mixing_length::OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, nonlocal_flux::Nothing, tke_equation::OceanTurb.TKEMassFlux.TKEParameters{Float64}, tke_wall_model::OceanTurb.TKEMassFlux.PrescribedSurfaceTKEFlux{Float64}, eddy_diffusivities::OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}) @ Main ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:21 [20] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [21] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:677 [inlined] [22] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [23] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [24] top-level scope @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:61 testing... OK testing... OK testing... OK TKEMassFlux: Error During Test at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 Test threw exception Expression: time_step_tke_mass_flux_model(boundary_layer_depth, mixing_length, nonlocal_flux, tke_equation, wall_model, eddy_diffusivity_model) BoundsError: attempt to access 6-element OffsetArray(::Vector{Float64}, 0:5) with eltype Float64 with indices 0:5 at index [6] Stacktrace: [1] throw_boundserror(A::OffsetArrays.OffsetVector{Float64, Vector{Float64}}, I::Tuple{Int64}) @ Base ./essentials.jl:14 [2] checkbounds @ ./abstractarray.jl:699 [inlined] [3] getindex @ ~/.julia/packages/OffsetArrays/b7qpm/src/OffsetArrays.jl:434 [inlined] [4] ∂z @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:361 [inlined] [5] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/KPP.jl:159 [inlined] [6] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/TKEMassFlux.jl:29 [inlined] [7] Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:111 [inlined] [8] oncell @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:461 [inlined] [9] cell_Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:115 [inlined] [10] Cᴷu @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:121 [inlined] [11] KU @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:5 [inlined] [12] #43 @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:157 [inlined] [13] macro expansion @ ./ntuple.jl:72 [inlined] [14] ntuple @ ./ntuple.jl:69 [inlined] [15] update!(solution::OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, m::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, Nothing, Nothing, OceanTurb.TKEMassFlux.TKEParameters{Float64}, Nothing, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, eqn::Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, bcs::@NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:151 [16] update! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:162 [inlined] [17] time_step! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:269 [inlined] [18] time_step!(model::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, Nothing, Nothing, OceanTurb.TKEMassFlux.TKEParameters{Float64}, Nothing, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, Δt::Float64, Nt::Int64) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:18 [19] time_step_tke_mass_flux_model(boundary_layer_depth::Nothing, mixing_length::OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, nonlocal_flux::Nothing, tke_equation::OceanTurb.TKEMassFlux.TKEParameters{Float64}, tke_wall_model::Nothing, eddy_diffusivities::OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}) @ Main ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:21 [20] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [21] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:677 [inlined] [22] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [23] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [24] top-level scope @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:61 testing... OK testing... OK testing... OK TKEMassFlux: Error During Test at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 Test threw exception Expression: time_step_tke_mass_flux_model(boundary_layer_depth, mixing_length, nonlocal_flux, tke_equation, wall_model, eddy_diffusivity_model) BoundsError: attempt to access 6-element OffsetArray(::Vector{Float64}, 0:5) with eltype Float64 with indices 0:5 at index [6] Stacktrace: [1] throw_boundserror(A::OffsetArrays.OffsetVector{Float64, Vector{Float64}}, I::Tuple{Int64}) @ Base ./essentials.jl:14 [2] checkbounds @ ./abstractarray.jl:699 [inlined] [3] getindex @ ~/.julia/packages/OffsetArrays/b7qpm/src/OffsetArrays.jl:434 [inlined] [4] ∂z @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:361 [inlined] [5] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/KPP.jl:159 [inlined] [6] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/TKEMassFlux.jl:29 [inlined] [7] Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:111 [inlined] [8] oncell @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:461 [inlined] [9] cell_Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:115 [inlined] [10] Cᴷu @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:121 [inlined] [11] KU @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:5 [inlined] [12] #43 @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:157 [inlined] [13] macro expansion @ ./ntuple.jl:72 [inlined] [14] ntuple @ ./ntuple.jl:69 [inlined] [15] update!(solution::OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, m::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedNearWallTKE{Float64}, Nothing, OceanTurb.TKEMassFlux.TKEParameters{Float64}, Nothing, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, eqn::Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, bcs::@NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:151 [16] update! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:162 [inlined] [17] time_step! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:269 [inlined] [18] time_step!(model::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedNearWallTKE{Float64}, Nothing, OceanTurb.TKEMassFlux.TKEParameters{Float64}, Nothing, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, Δt::Float64, Nt::Int64) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:18 [19] time_step_tke_mass_flux_model(boundary_layer_depth::Nothing, mixing_length::OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, nonlocal_flux::Nothing, tke_equation::OceanTurb.TKEMassFlux.TKEParameters{Float64}, tke_wall_model::OceanTurb.TKEMassFlux.PrescribedNearWallTKE{Float64}, eddy_diffusivities::OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}) @ Main ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:21 [20] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [21] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:677 [inlined] [22] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [23] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [24] top-level scope @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:61 testing... OK testing... OK testing... OK TKEMassFlux: Error During Test at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 Test threw exception Expression: time_step_tke_mass_flux_model(boundary_layer_depth, mixing_length, nonlocal_flux, tke_equation, wall_model, eddy_diffusivity_model) BoundsError: attempt to access 6-element OffsetArray(::Vector{Float64}, 0:5) with eltype Float64 with indices 0:5 at index [6] Stacktrace: [1] throw_boundserror(A::OffsetArrays.OffsetVector{Float64, Vector{Float64}}, I::Tuple{Int64}) @ Base ./essentials.jl:14 [2] checkbounds @ ./abstractarray.jl:699 [inlined] [3] getindex @ ~/.julia/packages/OffsetArrays/b7qpm/src/OffsetArrays.jl:434 [inlined] [4] ∂z @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:361 [inlined] [5] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/KPP.jl:159 [inlined] [6] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/TKEMassFlux.jl:29 [inlined] [7] Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:111 [inlined] [8] oncell @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:461 [inlined] [9] cell_Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:115 [inlined] [10] Cᴷu @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:121 [inlined] [11] KU @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:5 [inlined] [12] #43 @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:157 [inlined] [13] macro expansion @ ./ntuple.jl:72 [inlined] [14] ntuple @ ./ntuple.jl:69 [inlined] [15] update!(solution::OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, m::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedSurfaceTKEValue{Float64}, Nothing, OceanTurb.TKEMassFlux.TKEParameters{Float64}, Nothing, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, eqn::Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, bcs::@NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:151 [16] update! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:162 [inlined] [17] time_step! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:269 [inlined] [18] time_step!(model::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedSurfaceTKEValue{Float64}, Nothing, OceanTurb.TKEMassFlux.TKEParameters{Float64}, Nothing, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, Δt::Float64, Nt::Int64) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:18 [19] time_step_tke_mass_flux_model(boundary_layer_depth::Nothing, mixing_length::OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, nonlocal_flux::Nothing, tke_equation::OceanTurb.TKEMassFlux.TKEParameters{Float64}, tke_wall_model::OceanTurb.TKEMassFlux.PrescribedSurfaceTKEValue{Float64}, eddy_diffusivities::OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}) @ Main ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:21 [20] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [21] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:677 [inlined] [22] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [23] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [24] top-level scope @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:61 testing... OK testing... OK testing... OK TKEMassFlux: Error During Test at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 Test threw exception Expression: time_step_tke_mass_flux_model(boundary_layer_depth, mixing_length, nonlocal_flux, tke_equation, wall_model, eddy_diffusivity_model) BoundsError: attempt to access 6-element OffsetArray(::Vector{Float64}, 0:5) with eltype Float64 with indices 0:5 at index [6] Stacktrace: [1] throw_boundserror(A::OffsetArrays.OffsetVector{Float64, Vector{Float64}}, I::Tuple{Int64}) @ Base ./essentials.jl:14 [2] checkbounds @ ./abstractarray.jl:699 [inlined] [3] getindex @ ~/.julia/packages/OffsetArrays/b7qpm/src/OffsetArrays.jl:434 [inlined] [4] ∂z @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:361 [inlined] [5] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/KPP.jl:159 [inlined] [6] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/TKEMassFlux.jl:29 [inlined] [7] Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:111 [inlined] [8] oncell @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:461 [inlined] [9] cell_Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:115 [inlined] [10] Cᴷu @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:121 [inlined] [11] KU @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:5 [inlined] [12] #43 @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:157 [inlined] [13] macro expansion @ ./ntuple.jl:72 [inlined] [14] ntuple @ ./ntuple.jl:69 [inlined] [15] update!(solution::OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, m::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedSurfaceTKEFlux{Float64}, Nothing, OceanTurb.TKEMassFlux.TKEParameters{Float64}, Nothing, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, typeof(OceanTurb.TKEMassFlux.prescribed_surface_tke_flux)}}}, Float64}, eqn::Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, bcs::@NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, typeof(OceanTurb.TKEMassFlux.prescribed_surface_tke_flux)}}}) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:151 [16] update! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:162 [inlined] [17] time_step! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:269 [inlined] [18] time_step!(model::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedSurfaceTKEFlux{Float64}, Nothing, OceanTurb.TKEMassFlux.TKEParameters{Float64}, Nothing, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, typeof(OceanTurb.TKEMassFlux.prescribed_surface_tke_flux)}}}, Float64}, Δt::Float64, Nt::Int64) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:18 [19] time_step_tke_mass_flux_model(boundary_layer_depth::Nothing, mixing_length::OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, nonlocal_flux::Nothing, tke_equation::OceanTurb.TKEMassFlux.TKEParameters{Float64}, tke_wall_model::OceanTurb.TKEMassFlux.PrescribedSurfaceTKEFlux{Float64}, eddy_diffusivities::OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}) @ Main ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:21 [20] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [21] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:677 [inlined] [22] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [23] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [24] top-level scope @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:61 testing... OK testing... OK testing... OK TKEMassFlux: Error During Test at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 Test threw exception Expression: time_step_tke_mass_flux_model(boundary_layer_depth, mixing_length, nonlocal_flux, tke_equation, wall_model, eddy_diffusivity_model) BoundsError: attempt to access 6-element OffsetArray(::Vector{Float64}, 0:5) with eltype Float64 with indices 0:5 at index [6] Stacktrace: [1] throw_boundserror(A::OffsetArrays.OffsetVector{Float64, Vector{Float64}}, I::Tuple{Int64}) @ Base ./essentials.jl:14 [2] checkbounds @ ./abstractarray.jl:699 [inlined] [3] getindex @ ~/.julia/packages/OffsetArrays/b7qpm/src/OffsetArrays.jl:434 [inlined] [4] ∂z @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:361 [inlined] [5] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/KPP.jl:159 [inlined] [6] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/TKEMassFlux.jl:29 [inlined] [7] Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:111 [inlined] [8] oncell @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:461 [inlined] [9] cell_Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:115 [inlined] [10] Cᴷu @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:121 [inlined] [11] KU @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:5 [inlined] [12] #43 @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:157 [inlined] [13] macro expansion @ ./ntuple.jl:72 [inlined] [14] ntuple @ ./ntuple.jl:69 [inlined] [15] update!(solution::OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, m::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, Nothing, OceanTurb.ModularKPP.LMDCounterGradientFlux{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, Nothing, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, eqn::Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, bcs::@NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:151 [16] update! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:162 [inlined] [17] time_step! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:269 [inlined] [18] time_step!(model::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, Nothing, OceanTurb.ModularKPP.LMDCounterGradientFlux{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, Nothing, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, Δt::Float64, Nt::Int64) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:18 [19] time_step_tke_mass_flux_model(boundary_layer_depth::Nothing, mixing_length::OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, nonlocal_flux::OceanTurb.ModularKPP.LMDCounterGradientFlux{Float64}, tke_equation::OceanTurb.TKEMassFlux.TKEParameters{Float64}, tke_wall_model::Nothing, eddy_diffusivities::OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}) @ Main ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:21 [20] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [21] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:677 [inlined] [22] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [23] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [24] top-level scope @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:61 testing... OK testing... OK testing... OK TKEMassFlux: Error During Test at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 Test threw exception Expression: time_step_tke_mass_flux_model(boundary_layer_depth, mixing_length, nonlocal_flux, tke_equation, wall_model, eddy_diffusivity_model) BoundsError: attempt to access 6-element OffsetArray(::Vector{Float64}, 0:5) with eltype Float64 with indices 0:5 at index [6] Stacktrace: [1] throw_boundserror(A::OffsetArrays.OffsetVector{Float64, Vector{Float64}}, I::Tuple{Int64}) @ Base ./essentials.jl:14 [2] checkbounds @ ./abstractarray.jl:699 [inlined] [3] getindex @ ~/.julia/packages/OffsetArrays/b7qpm/src/OffsetArrays.jl:434 [inlined] [4] ∂z @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:361 [inlined] [5] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/KPP.jl:159 [inlined] [6] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/TKEMassFlux.jl:29 [inlined] [7] Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:111 [inlined] [8] oncell @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:461 [inlined] [9] cell_Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:115 [inlined] [10] Cᴷu @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:121 [inlined] [11] KU @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:5 [inlined] [12] #43 @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:157 [inlined] [13] macro expansion @ ./ntuple.jl:72 [inlined] [14] ntuple @ ./ntuple.jl:69 [inlined] [15] update!(solution::OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, m::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedNearWallTKE{Float64}, OceanTurb.ModularKPP.LMDCounterGradientFlux{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, Nothing, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, eqn::Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, bcs::@NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:151 [16] update! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:162 [inlined] [17] time_step! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:269 [inlined] [18] time_step!(model::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedNearWallTKE{Float64}, OceanTurb.ModularKPP.LMDCounterGradientFlux{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, Nothing, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, Δt::Float64, Nt::Int64) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:18 [19] time_step_tke_mass_flux_model(boundary_layer_depth::Nothing, mixing_length::OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, nonlocal_flux::OceanTurb.ModularKPP.LMDCounterGradientFlux{Float64}, tke_equation::OceanTurb.TKEMassFlux.TKEParameters{Float64}, tke_wall_model::OceanTurb.TKEMassFlux.PrescribedNearWallTKE{Float64}, eddy_diffusivities::OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}) @ Main ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:21 [20] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [21] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:677 [inlined] [22] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [23] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [24] top-level scope @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:61 testing... OK testing... OK testing... OK TKEMassFlux: Error During Test at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 Test threw exception Expression: time_step_tke_mass_flux_model(boundary_layer_depth, mixing_length, nonlocal_flux, tke_equation, wall_model, eddy_diffusivity_model) BoundsError: attempt to access 6-element OffsetArray(::Vector{Float64}, 0:5) with eltype Float64 with indices 0:5 at index [6] Stacktrace: [1] throw_boundserror(A::OffsetArrays.OffsetVector{Float64, Vector{Float64}}, I::Tuple{Int64}) @ Base ./essentials.jl:14 [2] checkbounds @ ./abstractarray.jl:699 [inlined] [3] getindex @ ~/.julia/packages/OffsetArrays/b7qpm/src/OffsetArrays.jl:434 [inlined] [4] ∂z @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:361 [inlined] [5] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/KPP.jl:159 [inlined] [6] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/TKEMassFlux.jl:29 [inlined] [7] Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:111 [inlined] [8] oncell @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:461 [inlined] [9] cell_Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:115 [inlined] [10] Cᴷu @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:121 [inlined] [11] KU @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:5 [inlined] [12] #43 @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:157 [inlined] [13] macro expansion @ ./ntuple.jl:72 [inlined] [14] ntuple @ ./ntuple.jl:69 [inlined] [15] update!(solution::OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, m::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedSurfaceTKEValue{Float64}, OceanTurb.ModularKPP.LMDCounterGradientFlux{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, Nothing, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, eqn::Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, bcs::@NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:151 [16] update! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:162 [inlined] [17] time_step! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:269 [inlined] [18] time_step!(model::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedSurfaceTKEValue{Float64}, OceanTurb.ModularKPP.LMDCounterGradientFlux{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, Nothing, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, Δt::Float64, Nt::Int64) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:18 [19] time_step_tke_mass_flux_model(boundary_layer_depth::Nothing, mixing_length::OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, nonlocal_flux::OceanTurb.ModularKPP.LMDCounterGradientFlux{Float64}, tke_equation::OceanTurb.TKEMassFlux.TKEParameters{Float64}, tke_wall_model::OceanTurb.TKEMassFlux.PrescribedSurfaceTKEValue{Float64}, eddy_diffusivities::OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}) @ Main ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:21 [20] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [21] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:677 [inlined] [22] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [23] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [24] top-level scope @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:61 testing... OK testing... OK testing... OK TKEMassFlux: Error During Test at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 Test threw exception Expression: time_step_tke_mass_flux_model(boundary_layer_depth, mixing_length, nonlocal_flux, tke_equation, wall_model, eddy_diffusivity_model) BoundsError: attempt to access 6-element OffsetArray(::Vector{Float64}, 0:5) with eltype Float64 with indices 0:5 at index [6] Stacktrace: [1] throw_boundserror(A::OffsetArrays.OffsetVector{Float64, Vector{Float64}}, I::Tuple{Int64}) @ Base ./essentials.jl:14 [2] checkbounds @ ./abstractarray.jl:699 [inlined] [3] getindex @ ~/.julia/packages/OffsetArrays/b7qpm/src/OffsetArrays.jl:434 [inlined] [4] ∂z @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:361 [inlined] [5] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/KPP.jl:159 [inlined] [6] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/TKEMassFlux.jl:29 [inlined] [7] Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:111 [inlined] [8] oncell @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:461 [inlined] [9] cell_Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:115 [inlined] [10] Cᴷu @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:121 [inlined] [11] KU @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:5 [inlined] [12] #43 @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:157 [inlined] [13] macro expansion @ ./ntuple.jl:72 [inlined] [14] ntuple @ ./ntuple.jl:69 [inlined] [15] update!(solution::OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, m::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedSurfaceTKEFlux{Float64}, OceanTurb.ModularKPP.LMDCounterGradientFlux{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, Nothing, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, typeof(OceanTurb.TKEMassFlux.prescribed_surface_tke_flux)}}}, Float64}, eqn::Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, bcs::@NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, typeof(OceanTurb.TKEMassFlux.prescribed_surface_tke_flux)}}}) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:151 [16] update! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:162 [inlined] [17] time_step! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:269 [inlined] [18] time_step!(model::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedSurfaceTKEFlux{Float64}, OceanTurb.ModularKPP.LMDCounterGradientFlux{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, Nothing, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, typeof(OceanTurb.TKEMassFlux.prescribed_surface_tke_flux)}}}, Float64}, Δt::Float64, Nt::Int64) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:18 [19] time_step_tke_mass_flux_model(boundary_layer_depth::Nothing, mixing_length::OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, nonlocal_flux::OceanTurb.ModularKPP.LMDCounterGradientFlux{Float64}, tke_equation::OceanTurb.TKEMassFlux.TKEParameters{Float64}, tke_wall_model::OceanTurb.TKEMassFlux.PrescribedSurfaceTKEFlux{Float64}, eddy_diffusivities::OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}) @ Main ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:21 [20] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [21] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:677 [inlined] [22] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [23] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [24] top-level scope @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:61 testing... OK testing... OK testing... OK TKEMassFlux: Error During Test at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 Test threw exception Expression: time_step_tke_mass_flux_model(boundary_layer_depth, mixing_length, nonlocal_flux, tke_equation, wall_model, eddy_diffusivity_model) BoundsError: attempt to access 6-element OffsetArray(::Vector{Float64}, 0:5) with eltype Float64 with indices 0:5 at index [6] Stacktrace: [1] throw_boundserror(A::OffsetArrays.OffsetVector{Float64, Vector{Float64}}, I::Tuple{Int64}) @ Base ./essentials.jl:14 [2] checkbounds @ ./abstractarray.jl:699 [inlined] [3] getindex @ ~/.julia/packages/OffsetArrays/b7qpm/src/OffsetArrays.jl:434 [inlined] [4] ∂z @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:361 [inlined] [5] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/KPP.jl:159 [inlined] [6] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/TKEMassFlux.jl:29 [inlined] [7] Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:111 [inlined] [8] oncell @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:461 [inlined] [9] cell_Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:115 [inlined] [10] Cᴷu @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:121 [inlined] [11] KU @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:5 [inlined] [12] #43 @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:157 [inlined] [13] macro expansion @ ./ntuple.jl:72 [inlined] [14] ntuple @ ./ntuple.jl:69 [inlined] [15] update!(solution::OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, m::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, Nothing, OceanTurb.ModularKPP.LMDCounterGradientFlux{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, Nothing, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, eqn::Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, bcs::@NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:151 [16] update! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:162 [inlined] [17] time_step! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:269 [inlined] [18] time_step!(model::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, Nothing, OceanTurb.ModularKPP.LMDCounterGradientFlux{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, Nothing, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, Δt::Float64, Nt::Int64) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:18 [19] time_step_tke_mass_flux_model(boundary_layer_depth::Nothing, mixing_length::OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, nonlocal_flux::OceanTurb.ModularKPP.LMDCounterGradientFlux{Float64}, tke_equation::OceanTurb.TKEMassFlux.TKEParameters{Float64}, tke_wall_model::Nothing, eddy_diffusivities::OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}) @ Main ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:21 [20] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [21] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:677 [inlined] [22] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [23] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [24] top-level scope @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:61 testing... OK testing... OK testing... OK TKEMassFlux: Error During Test at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 Test threw exception Expression: time_step_tke_mass_flux_model(boundary_layer_depth, mixing_length, nonlocal_flux, tke_equation, wall_model, eddy_diffusivity_model) BoundsError: attempt to access 6-element OffsetArray(::Vector{Float64}, 0:5) with eltype Float64 with indices 0:5 at index [6] Stacktrace: [1] throw_boundserror(A::OffsetArrays.OffsetVector{Float64, Vector{Float64}}, I::Tuple{Int64}) @ Base ./essentials.jl:14 [2] checkbounds @ ./abstractarray.jl:699 [inlined] [3] getindex @ ~/.julia/packages/OffsetArrays/b7qpm/src/OffsetArrays.jl:434 [inlined] [4] ∂z @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:361 [inlined] [5] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/KPP.jl:159 [inlined] [6] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/TKEMassFlux.jl:29 [inlined] [7] Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:111 [inlined] [8] oncell @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:461 [inlined] [9] cell_Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:115 [inlined] [10] Cᴷu @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:121 [inlined] [11] KU @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:5 [inlined] [12] #43 @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:157 [inlined] [13] macro expansion @ ./ntuple.jl:72 [inlined] [14] ntuple @ ./ntuple.jl:69 [inlined] [15] update!(solution::OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, m::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedNearWallTKE{Float64}, OceanTurb.ModularKPP.LMDCounterGradientFlux{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, Nothing, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, eqn::Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, bcs::@NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:151 [16] update! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:162 [inlined] [17] time_step! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:269 [inlined] [18] time_step!(model::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedNearWallTKE{Float64}, OceanTurb.ModularKPP.LMDCounterGradientFlux{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, Nothing, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, Δt::Float64, Nt::Int64) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:18 [19] time_step_tke_mass_flux_model(boundary_layer_depth::Nothing, mixing_length::OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, nonlocal_flux::OceanTurb.ModularKPP.LMDCounterGradientFlux{Float64}, tke_equation::OceanTurb.TKEMassFlux.TKEParameters{Float64}, tke_wall_model::OceanTurb.TKEMassFlux.PrescribedNearWallTKE{Float64}, eddy_diffusivities::OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}) @ Main ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:21 [20] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [21] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:677 [inlined] [22] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [23] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [24] top-level scope @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:61 testing... OK testing... OK testing... OK TKEMassFlux: Error During Test at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 Test threw exception Expression: time_step_tke_mass_flux_model(boundary_layer_depth, mixing_length, nonlocal_flux, tke_equation, wall_model, eddy_diffusivity_model) BoundsError: attempt to access 6-element OffsetArray(::Vector{Float64}, 0:5) with eltype Float64 with indices 0:5 at index [6] Stacktrace: [1] throw_boundserror(A::OffsetArrays.OffsetVector{Float64, Vector{Float64}}, I::Tuple{Int64}) @ Base ./essentials.jl:14 [2] checkbounds @ ./abstractarray.jl:699 [inlined] [3] getindex @ ~/.julia/packages/OffsetArrays/b7qpm/src/OffsetArrays.jl:434 [inlined] [4] ∂z @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:361 [inlined] [5] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/KPP.jl:159 [inlined] [6] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/TKEMassFlux.jl:29 [inlined] [7] Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:111 [inlined] [8] oncell @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:461 [inlined] [9] cell_Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:115 [inlined] [10] Cᴷu @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:121 [inlined] [11] KU @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:5 [inlined] [12] #43 @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:157 [inlined] [13] macro expansion @ ./ntuple.jl:72 [inlined] [14] ntuple @ ./ntuple.jl:69 [inlined] [15] update!(solution::OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, m::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedSurfaceTKEValue{Float64}, OceanTurb.ModularKPP.LMDCounterGradientFlux{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, Nothing, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, eqn::Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, bcs::@NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:151 [16] update! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:162 [inlined] [17] time_step! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:269 [inlined] [18] time_step!(model::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedSurfaceTKEValue{Float64}, OceanTurb.ModularKPP.LMDCounterGradientFlux{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, Nothing, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, Δt::Float64, Nt::Int64) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:18 [19] time_step_tke_mass_flux_model(boundary_layer_depth::Nothing, mixing_length::OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, nonlocal_flux::OceanTurb.ModularKPP.LMDCounterGradientFlux{Float64}, tke_equation::OceanTurb.TKEMassFlux.TKEParameters{Float64}, tke_wall_model::OceanTurb.TKEMassFlux.PrescribedSurfaceTKEValue{Float64}, eddy_diffusivities::OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}) @ Main ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:21 [20] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [21] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:677 [inlined] [22] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [23] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [24] top-level scope @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:61 testing... OK testing... OK testing... OK TKEMassFlux: Error During Test at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 Test threw exception Expression: time_step_tke_mass_flux_model(boundary_layer_depth, mixing_length, nonlocal_flux, tke_equation, wall_model, eddy_diffusivity_model) BoundsError: attempt to access 6-element OffsetArray(::Vector{Float64}, 0:5) with eltype Float64 with indices 0:5 at index [6] Stacktrace: [1] throw_boundserror(A::OffsetArrays.OffsetVector{Float64, Vector{Float64}}, I::Tuple{Int64}) @ Base ./essentials.jl:14 [2] checkbounds @ ./abstractarray.jl:699 [inlined] [3] getindex @ ~/.julia/packages/OffsetArrays/b7qpm/src/OffsetArrays.jl:434 [inlined] [4] ∂z @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:361 [inlined] [5] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/KPP.jl:159 [inlined] [6] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/TKEMassFlux.jl:29 [inlined] [7] Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:111 [inlined] [8] oncell @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:461 [inlined] [9] cell_Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:115 [inlined] [10] Cᴷu @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:121 [inlined] [11] KU @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:5 [inlined] [12] #43 @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:157 [inlined] [13] macro expansion @ ./ntuple.jl:72 [inlined] [14] ntuple @ ./ntuple.jl:69 [inlined] [15] update!(solution::OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, m::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedSurfaceTKEFlux{Float64}, OceanTurb.ModularKPP.LMDCounterGradientFlux{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, Nothing, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, typeof(OceanTurb.TKEMassFlux.prescribed_surface_tke_flux)}}}, Float64}, eqn::Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, bcs::@NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, typeof(OceanTurb.TKEMassFlux.prescribed_surface_tke_flux)}}}) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:151 [16] update! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:162 [inlined] [17] time_step! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:269 [inlined] [18] time_step!(model::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedSurfaceTKEFlux{Float64}, OceanTurb.ModularKPP.LMDCounterGradientFlux{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, Nothing, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, typeof(OceanTurb.TKEMassFlux.prescribed_surface_tke_flux)}}}, Float64}, Δt::Float64, Nt::Int64) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:18 [19] time_step_tke_mass_flux_model(boundary_layer_depth::Nothing, mixing_length::OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, nonlocal_flux::OceanTurb.ModularKPP.LMDCounterGradientFlux{Float64}, tke_equation::OceanTurb.TKEMassFlux.TKEParameters{Float64}, tke_wall_model::OceanTurb.TKEMassFlux.PrescribedSurfaceTKEFlux{Float64}, eddy_diffusivities::OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}) @ Main ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:21 [20] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [21] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:677 [inlined] [22] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [23] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [24] top-level scope @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:61 testing... OK testing... OK testing... OK TKEMassFlux: Error During Test at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 Test threw exception Expression: time_step_tke_mass_flux_model(boundary_layer_depth, mixing_length, nonlocal_flux, tke_equation, wall_model, eddy_diffusivity_model) BoundsError: attempt to access 6-element OffsetArray(::Vector{Float64}, 0:5) with eltype Float64 with indices 0:5 at index [6] Stacktrace: [1] throw_boundserror(A::OffsetArrays.OffsetVector{Float64, Vector{Float64}}, I::Tuple{Int64}) @ Base ./essentials.jl:14 [2] checkbounds @ ./abstractarray.jl:699 [inlined] [3] getindex @ ~/.julia/packages/OffsetArrays/b7qpm/src/OffsetArrays.jl:434 [inlined] [4] ∂z @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:361 [inlined] [5] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/KPP.jl:159 [inlined] [6] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/TKEMassFlux.jl:29 [inlined] [7] Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:111 [inlined] [8] oncell @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:461 [inlined] [9] cell_Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:115 [inlined] [10] Cᴷu @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:121 [inlined] [11] KU @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:5 [inlined] [12] #43 @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:157 [inlined] [13] macro expansion @ ./ntuple.jl:72 [inlined] [14] ntuple @ ./ntuple.jl:69 [inlined] [15] update!(solution::OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, m::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, Nothing, OceanTurb.ModularKPP.SiebesmaDiagnosticPlumeModel{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, Nothing, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, eqn::Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, bcs::@NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:151 [16] update! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:162 [inlined] [17] time_step! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:269 [inlined] [18] time_step!(model::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, Nothing, OceanTurb.ModularKPP.SiebesmaDiagnosticPlumeModel{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, Nothing, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, Δt::Float64, Nt::Int64) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:18 [19] time_step_tke_mass_flux_model(boundary_layer_depth::Nothing, mixing_length::OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, nonlocal_flux::OceanTurb.ModularKPP.SiebesmaDiagnosticPlumeModel{Float64}, tke_equation::OceanTurb.TKEMassFlux.TKEParameters{Float64}, tke_wall_model::Nothing, eddy_diffusivities::OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}) @ Main ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:21 [20] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [21] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:677 [inlined] [22] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [23] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [24] top-level scope @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:61 testing... OK testing... OK testing... OK TKEMassFlux: Error During Test at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 Test threw exception Expression: time_step_tke_mass_flux_model(boundary_layer_depth, mixing_length, nonlocal_flux, tke_equation, wall_model, eddy_diffusivity_model) BoundsError: attempt to access 6-element OffsetArray(::Vector{Float64}, 0:5) with eltype Float64 with indices 0:5 at index [6] Stacktrace: [1] throw_boundserror(A::OffsetArrays.OffsetVector{Float64, Vector{Float64}}, I::Tuple{Int64}) @ Base ./essentials.jl:14 [2] checkbounds @ ./abstractarray.jl:699 [inlined] [3] getindex @ ~/.julia/packages/OffsetArrays/b7qpm/src/OffsetArrays.jl:434 [inlined] [4] ∂z @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:361 [inlined] [5] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/KPP.jl:159 [inlined] [6] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/TKEMassFlux.jl:29 [inlined] [7] Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:111 [inlined] [8] oncell @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:461 [inlined] [9] cell_Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:115 [inlined] [10] Cᴷu @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:121 [inlined] [11] KU @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:5 [inlined] [12] #43 @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:157 [inlined] [13] macro expansion @ ./ntuple.jl:72 [inlined] [14] ntuple @ ./ntuple.jl:69 [inlined] [15] update!(solution::OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, m::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedNearWallTKE{Float64}, OceanTurb.ModularKPP.SiebesmaDiagnosticPlumeModel{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, Nothing, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, eqn::Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, bcs::@NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:151 [16] update! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:162 [inlined] [17] time_step! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:269 [inlined] [18] time_step!(model::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedNearWallTKE{Float64}, OceanTurb.ModularKPP.SiebesmaDiagnosticPlumeModel{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, Nothing, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, Δt::Float64, Nt::Int64) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:18 [19] time_step_tke_mass_flux_model(boundary_layer_depth::Nothing, mixing_length::OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, nonlocal_flux::OceanTurb.ModularKPP.SiebesmaDiagnosticPlumeModel{Float64}, tke_equation::OceanTurb.TKEMassFlux.TKEParameters{Float64}, tke_wall_model::OceanTurb.TKEMassFlux.PrescribedNearWallTKE{Float64}, eddy_diffusivities::OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}) @ Main ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:21 [20] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [21] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:677 [inlined] [22] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [23] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [24] top-level scope @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:61 testing... OK testing... OK testing... OK TKEMassFlux: Error During Test at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 Test threw exception Expression: time_step_tke_mass_flux_model(boundary_layer_depth, mixing_length, nonlocal_flux, tke_equation, wall_model, eddy_diffusivity_model) BoundsError: attempt to access 6-element OffsetArray(::Vector{Float64}, 0:5) with eltype Float64 with indices 0:5 at index [6] Stacktrace: [1] throw_boundserror(A::OffsetArrays.OffsetVector{Float64, Vector{Float64}}, I::Tuple{Int64}) @ Base ./essentials.jl:14 [2] checkbounds @ ./abstractarray.jl:699 [inlined] [3] getindex @ ~/.julia/packages/OffsetArrays/b7qpm/src/OffsetArrays.jl:434 [inlined] [4] ∂z @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:361 [inlined] [5] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/KPP.jl:159 [inlined] [6] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/TKEMassFlux.jl:29 [inlined] [7] Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:111 [inlined] [8] oncell @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:461 [inlined] [9] cell_Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:115 [inlined] [10] Cᴷu @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:121 [inlined] [11] KU @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:5 [inlined] [12] #43 @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:157 [inlined] [13] macro expansion @ ./ntuple.jl:72 [inlined] [14] ntuple @ ./ntuple.jl:69 [inlined] [15] update!(solution::OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, m::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedSurfaceTKEValue{Float64}, OceanTurb.ModularKPP.SiebesmaDiagnosticPlumeModel{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, Nothing, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, eqn::Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, bcs::@NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:151 [16] update! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:162 [inlined] [17] time_step! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:269 [inlined] [18] time_step!(model::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedSurfaceTKEValue{Float64}, OceanTurb.ModularKPP.SiebesmaDiagnosticPlumeModel{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, Nothing, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, Δt::Float64, Nt::Int64) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:18 [19] time_step_tke_mass_flux_model(boundary_layer_depth::Nothing, mixing_length::OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, nonlocal_flux::OceanTurb.ModularKPP.SiebesmaDiagnosticPlumeModel{Float64}, tke_equation::OceanTurb.TKEMassFlux.TKEParameters{Float64}, tke_wall_model::OceanTurb.TKEMassFlux.PrescribedSurfaceTKEValue{Float64}, eddy_diffusivities::OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}) @ Main ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:21 [20] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [21] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:677 [inlined] [22] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [23] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [24] top-level scope @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:61 testing... OK testing... OK testing... OK TKEMassFlux: Error During Test at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 Test threw exception Expression: time_step_tke_mass_flux_model(boundary_layer_depth, mixing_length, nonlocal_flux, tke_equation, wall_model, eddy_diffusivity_model) BoundsError: attempt to access 6-element OffsetArray(::Vector{Float64}, 0:5) with eltype Float64 with indices 0:5 at index [6] Stacktrace: [1] throw_boundserror(A::OffsetArrays.OffsetVector{Float64, Vector{Float64}}, I::Tuple{Int64}) @ Base ./essentials.jl:14 [2] checkbounds @ ./abstractarray.jl:699 [inlined] [3] getindex @ ~/.julia/packages/OffsetArrays/b7qpm/src/OffsetArrays.jl:434 [inlined] [4] ∂z @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:361 [inlined] [5] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/KPP.jl:159 [inlined] [6] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/TKEMassFlux.jl:29 [inlined] [7] Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:111 [inlined] [8] oncell @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:461 [inlined] [9] cell_Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:115 [inlined] [10] Cᴷu @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:121 [inlined] [11] KU @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:5 [inlined] [12] #43 @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:157 [inlined] [13] macro expansion @ ./ntuple.jl:72 [inlined] [14] ntuple @ ./ntuple.jl:69 [inlined] [15] update!(solution::OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, m::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedSurfaceTKEFlux{Float64}, OceanTurb.ModularKPP.SiebesmaDiagnosticPlumeModel{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, Nothing, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, typeof(OceanTurb.TKEMassFlux.prescribed_surface_tke_flux)}}}, Float64}, eqn::Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, bcs::@NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, typeof(OceanTurb.TKEMassFlux.prescribed_surface_tke_flux)}}}) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:151 [16] update! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:162 [inlined] [17] time_step! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:269 [inlined] [18] time_step!(model::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedSurfaceTKEFlux{Float64}, OceanTurb.ModularKPP.SiebesmaDiagnosticPlumeModel{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, Nothing, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, typeof(OceanTurb.TKEMassFlux.prescribed_surface_tke_flux)}}}, Float64}, Δt::Float64, Nt::Int64) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:18 [19] time_step_tke_mass_flux_model(boundary_layer_depth::Nothing, mixing_length::OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, nonlocal_flux::OceanTurb.ModularKPP.SiebesmaDiagnosticPlumeModel{Float64}, tke_equation::OceanTurb.TKEMassFlux.TKEParameters{Float64}, tke_wall_model::OceanTurb.TKEMassFlux.PrescribedSurfaceTKEFlux{Float64}, eddy_diffusivities::OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}) @ Main ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:21 [20] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [21] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:677 [inlined] [22] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [23] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [24] top-level scope @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:61 testing... OK testing... OK testing... OK TKEMassFlux: Error During Test at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 Test threw exception Expression: time_step_tke_mass_flux_model(boundary_layer_depth, mixing_length, nonlocal_flux, tke_equation, wall_model, eddy_diffusivity_model) BoundsError: attempt to access 6-element OffsetArray(::Vector{Float64}, 0:5) with eltype Float64 with indices 0:5 at index [6] Stacktrace: [1] throw_boundserror(A::OffsetArrays.OffsetVector{Float64, Vector{Float64}}, I::Tuple{Int64}) @ Base ./essentials.jl:14 [2] checkbounds @ ./abstractarray.jl:699 [inlined] [3] getindex @ ~/.julia/packages/OffsetArrays/b7qpm/src/OffsetArrays.jl:434 [inlined] [4] ∂z @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:361 [inlined] [5] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/KPP.jl:159 [inlined] [6] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/TKEMassFlux.jl:29 [inlined] [7] Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:111 [inlined] [8] oncell @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:461 [inlined] [9] cell_Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:115 [inlined] [10] Cᴷu @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:121 [inlined] [11] KU @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:5 [inlined] [12] #43 @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:157 [inlined] [13] macro expansion @ ./ntuple.jl:72 [inlined] [14] ntuple @ ./ntuple.jl:69 [inlined] [15] update!(solution::OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, m::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, Nothing, OceanTurb.ModularKPP.SiebesmaDiagnosticPlumeModel{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, Nothing, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, eqn::Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, bcs::@NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:151 [16] update! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:162 [inlined] [17] time_step! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:269 [inlined] [18] time_step!(model::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, Nothing, OceanTurb.ModularKPP.SiebesmaDiagnosticPlumeModel{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, Nothing, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, Δt::Float64, Nt::Int64) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:18 [19] time_step_tke_mass_flux_model(boundary_layer_depth::Nothing, mixing_length::OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, nonlocal_flux::OceanTurb.ModularKPP.SiebesmaDiagnosticPlumeModel{Float64}, tke_equation::OceanTurb.TKEMassFlux.TKEParameters{Float64}, tke_wall_model::Nothing, eddy_diffusivities::OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}) @ Main ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:21 [20] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [21] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:677 [inlined] [22] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [23] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [24] top-level scope @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:61 testing... OK testing... OK testing... OK TKEMassFlux: Error During Test at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 Test threw exception Expression: time_step_tke_mass_flux_model(boundary_layer_depth, mixing_length, nonlocal_flux, tke_equation, wall_model, eddy_diffusivity_model) BoundsError: attempt to access 6-element OffsetArray(::Vector{Float64}, 0:5) with eltype Float64 with indices 0:5 at index [6] Stacktrace: [1] throw_boundserror(A::OffsetArrays.OffsetVector{Float64, Vector{Float64}}, I::Tuple{Int64}) @ Base ./essentials.jl:14 [2] checkbounds @ ./abstractarray.jl:699 [inlined] [3] getindex @ ~/.julia/packages/OffsetArrays/b7qpm/src/OffsetArrays.jl:434 [inlined] [4] ∂z @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:361 [inlined] [5] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/KPP.jl:159 [inlined] [6] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/TKEMassFlux.jl:29 [inlined] [7] Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:111 [inlined] [8] oncell @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:461 [inlined] [9] cell_Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:115 [inlined] [10] Cᴷu @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:121 [inlined] [11] KU @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:5 [inlined] [12] #43 @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:157 [inlined] [13] macro expansion @ ./ntuple.jl:72 [inlined] [14] ntuple @ ./ntuple.jl:69 [inlined] [15] update!(solution::OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, m::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedNearWallTKE{Float64}, OceanTurb.ModularKPP.SiebesmaDiagnosticPlumeModel{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, Nothing, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, eqn::Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, bcs::@NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:151 [16] update! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:162 [inlined] [17] time_step! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:269 [inlined] [18] time_step!(model::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedNearWallTKE{Float64}, OceanTurb.ModularKPP.SiebesmaDiagnosticPlumeModel{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, Nothing, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, Δt::Float64, Nt::Int64) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:18 [19] time_step_tke_mass_flux_model(boundary_layer_depth::Nothing, mixing_length::OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, nonlocal_flux::OceanTurb.ModularKPP.SiebesmaDiagnosticPlumeModel{Float64}, tke_equation::OceanTurb.TKEMassFlux.TKEParameters{Float64}, tke_wall_model::OceanTurb.TKEMassFlux.PrescribedNearWallTKE{Float64}, eddy_diffusivities::OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}) @ Main ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:21 [20] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [21] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:677 [inlined] [22] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [23] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [24] top-level scope @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:61 testing... OK testing... OK testing... OK TKEMassFlux: Error During Test at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 Test threw exception Expression: time_step_tke_mass_flux_model(boundary_layer_depth, mixing_length, nonlocal_flux, tke_equation, wall_model, eddy_diffusivity_model) BoundsError: attempt to access 6-element OffsetArray(::Vector{Float64}, 0:5) with eltype Float64 with indices 0:5 at index [6] Stacktrace: [1] throw_boundserror(A::OffsetArrays.OffsetVector{Float64, Vector{Float64}}, I::Tuple{Int64}) @ Base ./essentials.jl:14 [2] checkbounds @ ./abstractarray.jl:699 [inlined] [3] getindex @ ~/.julia/packages/OffsetArrays/b7qpm/src/OffsetArrays.jl:434 [inlined] [4] ∂z @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:361 [inlined] [5] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/KPP.jl:159 [inlined] [6] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/TKEMassFlux.jl:29 [inlined] [7] Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:111 [inlined] [8] oncell @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:461 [inlined] [9] cell_Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:115 [inlined] [10] Cᴷu @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:121 [inlined] [11] KU @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:5 [inlined] [12] #43 @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:157 [inlined] [13] macro expansion @ ./ntuple.jl:72 [inlined] [14] ntuple @ ./ntuple.jl:69 [inlined] [15] update!(solution::OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, m::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedSurfaceTKEValue{Float64}, OceanTurb.ModularKPP.SiebesmaDiagnosticPlumeModel{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, Nothing, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, eqn::Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, bcs::@NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:151 [16] update! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:162 [inlined] [17] time_step! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:269 [inlined] [18] time_step!(model::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedSurfaceTKEValue{Float64}, OceanTurb.ModularKPP.SiebesmaDiagnosticPlumeModel{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, Nothing, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, Δt::Float64, Nt::Int64) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:18 [19] time_step_tke_mass_flux_model(boundary_layer_depth::Nothing, mixing_length::OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, nonlocal_flux::OceanTurb.ModularKPP.SiebesmaDiagnosticPlumeModel{Float64}, tke_equation::OceanTurb.TKEMassFlux.TKEParameters{Float64}, tke_wall_model::OceanTurb.TKEMassFlux.PrescribedSurfaceTKEValue{Float64}, eddy_diffusivities::OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}) @ Main ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:21 [20] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [21] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:677 [inlined] [22] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [23] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [24] top-level scope @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:61 testing... OK testing... OK testing... OK TKEMassFlux: Error During Test at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 Test threw exception Expression: time_step_tke_mass_flux_model(boundary_layer_depth, mixing_length, nonlocal_flux, tke_equation, wall_model, eddy_diffusivity_model) BoundsError: attempt to access 6-element OffsetArray(::Vector{Float64}, 0:5) with eltype Float64 with indices 0:5 at index [6] Stacktrace: [1] throw_boundserror(A::OffsetArrays.OffsetVector{Float64, Vector{Float64}}, I::Tuple{Int64}) @ Base ./essentials.jl:14 [2] checkbounds @ ./abstractarray.jl:699 [inlined] [3] getindex @ ~/.julia/packages/OffsetArrays/b7qpm/src/OffsetArrays.jl:434 [inlined] [4] ∂z @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:361 [inlined] [5] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/KPP.jl:159 [inlined] [6] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/TKEMassFlux.jl:29 [inlined] [7] Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:111 [inlined] [8] oncell @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:461 [inlined] [9] cell_Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:115 [inlined] [10] Cᴷu @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:121 [inlined] [11] KU @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:5 [inlined] [12] #43 @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:157 [inlined] [13] macro expansion @ ./ntuple.jl:72 [inlined] [14] ntuple @ ./ntuple.jl:69 [inlined] [15] update!(solution::OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, m::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedSurfaceTKEFlux{Float64}, OceanTurb.ModularKPP.SiebesmaDiagnosticPlumeModel{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, Nothing, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, typeof(OceanTurb.TKEMassFlux.prescribed_surface_tke_flux)}}}, Float64}, eqn::Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, bcs::@NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, typeof(OceanTurb.TKEMassFlux.prescribed_surface_tke_flux)}}}) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:151 [16] update! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:162 [inlined] [17] time_step! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:269 [inlined] [18] time_step!(model::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedSurfaceTKEFlux{Float64}, OceanTurb.ModularKPP.SiebesmaDiagnosticPlumeModel{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, Nothing, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, typeof(OceanTurb.TKEMassFlux.prescribed_surface_tke_flux)}}}, Float64}, Δt::Float64, Nt::Int64) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:18 [19] time_step_tke_mass_flux_model(boundary_layer_depth::Nothing, mixing_length::OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, nonlocal_flux::OceanTurb.ModularKPP.SiebesmaDiagnosticPlumeModel{Float64}, tke_equation::OceanTurb.TKEMassFlux.TKEParameters{Float64}, tke_wall_model::OceanTurb.TKEMassFlux.PrescribedSurfaceTKEFlux{Float64}, eddy_diffusivities::OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}) @ Main ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:21 [20] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [21] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:677 [inlined] [22] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [23] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [24] top-level scope @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:61 testing... OK testing... OK testing... OK TKEMassFlux: Error During Test at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 Test threw exception Expression: time_step_tke_mass_flux_model(boundary_layer_depth, mixing_length, nonlocal_flux, tke_equation, wall_model, eddy_diffusivity_model) BoundsError: attempt to access 6-element OffsetArray(::Vector{Float64}, 0:5) with eltype Float64 with indices 0:5 at index [6] Stacktrace: [1] throw_boundserror(A::OffsetArrays.OffsetVector{Float64, Vector{Float64}}, I::Tuple{Int64}) @ Base ./essentials.jl:14 [2] checkbounds @ ./abstractarray.jl:699 [inlined] [3] getindex @ ~/.julia/packages/OffsetArrays/b7qpm/src/OffsetArrays.jl:434 [inlined] [4] ∂z @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:361 [inlined] [5] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/KPP.jl:159 [inlined] [6] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/TKEMassFlux.jl:29 [inlined] [7] Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:111 [inlined] [8] oncell @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:461 [inlined] [9] cell_Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:115 [inlined] [10] Cᴷu @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:121 [inlined] [11] KU @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:5 [inlined] [12] #43 @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:157 [inlined] [13] macro expansion @ ./ntuple.jl:72 [inlined] [14] ntuple @ ./ntuple.jl:69 [inlined] [15] update!(solution::OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, m::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, Nothing, Nothing, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.LMDMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, eqn::Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, bcs::@NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:151 [16] update! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:162 [inlined] [17] time_step! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:269 [inlined] [18] time_step!(model::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, Nothing, Nothing, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.LMDMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, Δt::Float64, Nt::Int64) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:18 [19] time_step_tke_mass_flux_model(boundary_layer_depth::OceanTurb.ModularKPP.LMDMixingDepth{Float64}, mixing_length::OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, nonlocal_flux::Nothing, tke_equation::OceanTurb.TKEMassFlux.TKEParameters{Float64}, tke_wall_model::Nothing, eddy_diffusivities::OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}) @ Main ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:21 [20] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [21] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:677 [inlined] [22] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [23] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [24] top-level scope @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:61 testing... OK testing... OK testing... OK TKEMassFlux: Error During Test at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 Test threw exception Expression: time_step_tke_mass_flux_model(boundary_layer_depth, mixing_length, nonlocal_flux, tke_equation, wall_model, eddy_diffusivity_model) BoundsError: attempt to access 6-element OffsetArray(::Vector{Float64}, 0:5) with eltype Float64 with indices 0:5 at index [6] Stacktrace: [1] throw_boundserror(A::OffsetArrays.OffsetVector{Float64, Vector{Float64}}, I::Tuple{Int64}) @ Base ./essentials.jl:14 [2] checkbounds @ ./abstractarray.jl:699 [inlined] [3] getindex @ ~/.julia/packages/OffsetArrays/b7qpm/src/OffsetArrays.jl:434 [inlined] [4] ∂z @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:361 [inlined] [5] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/KPP.jl:159 [inlined] [6] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/TKEMassFlux.jl:29 [inlined] [7] Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:111 [inlined] [8] oncell @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:461 [inlined] [9] cell_Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:115 [inlined] [10] Cᴷu @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:121 [inlined] [11] KU @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:5 [inlined] [12] #43 @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:157 [inlined] [13] macro expansion @ ./ntuple.jl:72 [inlined] [14] ntuple @ ./ntuple.jl:69 [inlined] [15] update!(solution::OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, m::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedNearWallTKE{Float64}, Nothing, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.LMDMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, eqn::Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, bcs::@NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:151 [16] update! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:162 [inlined] [17] time_step! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:269 [inlined] [18] time_step!(model::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedNearWallTKE{Float64}, Nothing, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.LMDMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, Δt::Float64, Nt::Int64) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:18 [19] time_step_tke_mass_flux_model(boundary_layer_depth::OceanTurb.ModularKPP.LMDMixingDepth{Float64}, mixing_length::OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, nonlocal_flux::Nothing, tke_equation::OceanTurb.TKEMassFlux.TKEParameters{Float64}, tke_wall_model::OceanTurb.TKEMassFlux.PrescribedNearWallTKE{Float64}, eddy_diffusivities::OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}) @ Main ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:21 [20] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [21] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:677 [inlined] [22] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [23] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [24] top-level scope @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:61 testing... OK testing... OK testing... OK TKEMassFlux: Error During Test at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 Test threw exception Expression: time_step_tke_mass_flux_model(boundary_layer_depth, mixing_length, nonlocal_flux, tke_equation, wall_model, eddy_diffusivity_model) BoundsError: attempt to access 6-element OffsetArray(::Vector{Float64}, 0:5) with eltype Float64 with indices 0:5 at index [6] Stacktrace: [1] throw_boundserror(A::OffsetArrays.OffsetVector{Float64, Vector{Float64}}, I::Tuple{Int64}) @ Base ./essentials.jl:14 [2] checkbounds @ ./abstractarray.jl:699 [inlined] [3] getindex @ ~/.julia/packages/OffsetArrays/b7qpm/src/OffsetArrays.jl:434 [inlined] [4] ∂z @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:361 [inlined] [5] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/KPP.jl:159 [inlined] [6] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/TKEMassFlux.jl:29 [inlined] [7] Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:111 [inlined] [8] oncell @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:461 [inlined] [9] cell_Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:115 [inlined] [10] Cᴷu @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:121 [inlined] [11] KU @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:5 [inlined] [12] #43 @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:157 [inlined] [13] macro expansion @ ./ntuple.jl:72 [inlined] [14] ntuple @ ./ntuple.jl:69 [inlined] [15] update!(solution::OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, m::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedSurfaceTKEValue{Float64}, Nothing, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.LMDMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, eqn::Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, bcs::@NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:151 [16] update! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:162 [inlined] [17] time_step! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:269 [inlined] [18] time_step!(model::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedSurfaceTKEValue{Float64}, Nothing, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.LMDMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, Δt::Float64, Nt::Int64) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:18 [19] time_step_tke_mass_flux_model(boundary_layer_depth::OceanTurb.ModularKPP.LMDMixingDepth{Float64}, mixing_length::OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, nonlocal_flux::Nothing, tke_equation::OceanTurb.TKEMassFlux.TKEParameters{Float64}, tke_wall_model::OceanTurb.TKEMassFlux.PrescribedSurfaceTKEValue{Float64}, eddy_diffusivities::OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}) @ Main ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:21 [20] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [21] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:677 [inlined] [22] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [23] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [24] top-level scope @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:61 testing... OK testing... OK testing... OK TKEMassFlux: Error During Test at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 Test threw exception Expression: time_step_tke_mass_flux_model(boundary_layer_depth, mixing_length, nonlocal_flux, tke_equation, wall_model, eddy_diffusivity_model) BoundsError: attempt to access 6-element OffsetArray(::Vector{Float64}, 0:5) with eltype Float64 with indices 0:5 at index [6] Stacktrace: [1] throw_boundserror(A::OffsetArrays.OffsetVector{Float64, Vector{Float64}}, I::Tuple{Int64}) @ Base ./essentials.jl:14 [2] checkbounds @ ./abstractarray.jl:699 [inlined] [3] getindex @ ~/.julia/packages/OffsetArrays/b7qpm/src/OffsetArrays.jl:434 [inlined] [4] ∂z @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:361 [inlined] [5] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/KPP.jl:159 [inlined] [6] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/TKEMassFlux.jl:29 [inlined] [7] Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:111 [inlined] [8] oncell @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:461 [inlined] [9] cell_Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:115 [inlined] [10] Cᴷu @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:121 [inlined] [11] KU @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:5 [inlined] [12] #43 @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:157 [inlined] [13] macro expansion @ ./ntuple.jl:72 [inlined] [14] ntuple @ ./ntuple.jl:69 [inlined] [15] update!(solution::OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, m::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedSurfaceTKEFlux{Float64}, Nothing, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.LMDMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, typeof(OceanTurb.TKEMassFlux.prescribed_surface_tke_flux)}}}, Float64}, eqn::Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, bcs::@NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, typeof(OceanTurb.TKEMassFlux.prescribed_surface_tke_flux)}}}) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:151 [16] update! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:162 [inlined] [17] time_step! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:269 [inlined] [18] time_step!(model::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedSurfaceTKEFlux{Float64}, Nothing, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.LMDMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, typeof(OceanTurb.TKEMassFlux.prescribed_surface_tke_flux)}}}, Float64}, Δt::Float64, Nt::Int64) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:18 [19] time_step_tke_mass_flux_model(boundary_layer_depth::OceanTurb.ModularKPP.LMDMixingDepth{Float64}, mixing_length::OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, nonlocal_flux::Nothing, tke_equation::OceanTurb.TKEMassFlux.TKEParameters{Float64}, tke_wall_model::OceanTurb.TKEMassFlux.PrescribedSurfaceTKEFlux{Float64}, eddy_diffusivities::OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}) @ Main ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:21 [20] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [21] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:677 [inlined] [22] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [23] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [24] top-level scope @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:61 testing... OK testing... OK testing... OK TKEMassFlux: Error During Test at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 Test threw exception Expression: time_step_tke_mass_flux_model(boundary_layer_depth, mixing_length, nonlocal_flux, tke_equation, wall_model, eddy_diffusivity_model) BoundsError: attempt to access 6-element OffsetArray(::Vector{Float64}, 0:5) with eltype Float64 with indices 0:5 at index [6] Stacktrace: [1] throw_boundserror(A::OffsetArrays.OffsetVector{Float64, Vector{Float64}}, I::Tuple{Int64}) @ Base ./essentials.jl:14 [2] checkbounds @ ./abstractarray.jl:699 [inlined] [3] getindex @ ~/.julia/packages/OffsetArrays/b7qpm/src/OffsetArrays.jl:434 [inlined] [4] ∂z @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:361 [inlined] [5] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/KPP.jl:159 [inlined] [6] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/TKEMassFlux.jl:29 [inlined] [7] Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:111 [inlined] [8] oncell @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:461 [inlined] [9] cell_Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:115 [inlined] [10] Cᴷu @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:121 [inlined] [11] KU @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:5 [inlined] [12] #43 @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:157 [inlined] [13] macro expansion @ ./ntuple.jl:72 [inlined] [14] ntuple @ ./ntuple.jl:69 [inlined] [15] update!(solution::OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, m::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, Nothing, Nothing, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.LMDMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, eqn::Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, bcs::@NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:151 [16] update! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:162 [inlined] [17] time_step! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:269 [inlined] [18] time_step!(model::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, Nothing, Nothing, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.LMDMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, Δt::Float64, Nt::Int64) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:18 [19] time_step_tke_mass_flux_model(boundary_layer_depth::OceanTurb.ModularKPP.LMDMixingDepth{Float64}, mixing_length::OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, nonlocal_flux::Nothing, tke_equation::OceanTurb.TKEMassFlux.TKEParameters{Float64}, tke_wall_model::Nothing, eddy_diffusivities::OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}) @ Main ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:21 [20] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [21] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:677 [inlined] [22] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [23] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [24] top-level scope @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:61 testing... OK testing... OK testing... OK TKEMassFlux: Error During Test at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 Test threw exception Expression: time_step_tke_mass_flux_model(boundary_layer_depth, mixing_length, nonlocal_flux, tke_equation, wall_model, eddy_diffusivity_model) BoundsError: attempt to access 6-element OffsetArray(::Vector{Float64}, 0:5) with eltype Float64 with indices 0:5 at index [6] Stacktrace: [1] throw_boundserror(A::OffsetArrays.OffsetVector{Float64, Vector{Float64}}, I::Tuple{Int64}) @ Base ./essentials.jl:14 [2] checkbounds @ ./abstractarray.jl:699 [inlined] [3] getindex @ ~/.julia/packages/OffsetArrays/b7qpm/src/OffsetArrays.jl:434 [inlined] [4] ∂z @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:361 [inlined] [5] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/KPP.jl:159 [inlined] [6] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/TKEMassFlux.jl:29 [inlined] [7] Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:111 [inlined] [8] oncell @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:461 [inlined] [9] cell_Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:115 [inlined] [10] Cᴷu @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:121 [inlined] [11] KU @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:5 [inlined] [12] #43 @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:157 [inlined] [13] macro expansion @ ./ntuple.jl:72 [inlined] [14] ntuple @ ./ntuple.jl:69 [inlined] [15] update!(solution::OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, m::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedNearWallTKE{Float64}, Nothing, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.LMDMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, eqn::Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, bcs::@NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:151 [16] update! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:162 [inlined] [17] time_step! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:269 [inlined] [18] time_step!(model::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedNearWallTKE{Float64}, Nothing, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.LMDMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, Δt::Float64, Nt::Int64) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:18 [19] time_step_tke_mass_flux_model(boundary_layer_depth::OceanTurb.ModularKPP.LMDMixingDepth{Float64}, mixing_length::OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, nonlocal_flux::Nothing, tke_equation::OceanTurb.TKEMassFlux.TKEParameters{Float64}, tke_wall_model::OceanTurb.TKEMassFlux.PrescribedNearWallTKE{Float64}, eddy_diffusivities::OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}) @ Main ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:21 [20] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [21] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:677 [inlined] [22] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [23] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [24] top-level scope @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:61 testing... OK testing... OK testing... OK TKEMassFlux: Error During Test at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 Test threw exception Expression: time_step_tke_mass_flux_model(boundary_layer_depth, mixing_length, nonlocal_flux, tke_equation, wall_model, eddy_diffusivity_model) BoundsError: attempt to access 6-element OffsetArray(::Vector{Float64}, 0:5) with eltype Float64 with indices 0:5 at index [6] Stacktrace: [1] throw_boundserror(A::OffsetArrays.OffsetVector{Float64, Vector{Float64}}, I::Tuple{Int64}) @ Base ./essentials.jl:14 [2] checkbounds @ ./abstractarray.jl:699 [inlined] [3] getindex @ ~/.julia/packages/OffsetArrays/b7qpm/src/OffsetArrays.jl:434 [inlined] [4] ∂z @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:361 [inlined] [5] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/KPP.jl:159 [inlined] [6] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/TKEMassFlux.jl:29 [inlined] [7] Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:111 [inlined] [8] oncell @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:461 [inlined] [9] cell_Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:115 [inlined] [10] Cᴷu @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:121 [inlined] [11] KU @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:5 [inlined] [12] #43 @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:157 [inlined] [13] macro expansion @ ./ntuple.jl:72 [inlined] [14] ntuple @ ./ntuple.jl:69 [inlined] [15] update!(solution::OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, m::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedSurfaceTKEValue{Float64}, Nothing, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.LMDMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, eqn::Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, bcs::@NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:151 [16] update! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:162 [inlined] [17] time_step! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:269 [inlined] [18] time_step!(model::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedSurfaceTKEValue{Float64}, Nothing, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.LMDMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, Δt::Float64, Nt::Int64) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:18 [19] time_step_tke_mass_flux_model(boundary_layer_depth::OceanTurb.ModularKPP.LMDMixingDepth{Float64}, mixing_length::OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, nonlocal_flux::Nothing, tke_equation::OceanTurb.TKEMassFlux.TKEParameters{Float64}, tke_wall_model::OceanTurb.TKEMassFlux.PrescribedSurfaceTKEValue{Float64}, eddy_diffusivities::OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}) @ Main ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:21 [20] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [21] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:677 [inlined] [22] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [23] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [24] top-level scope @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:61 testing... OK testing... OK testing... OK TKEMassFlux: Error During Test at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 Test threw exception Expression: time_step_tke_mass_flux_model(boundary_layer_depth, mixing_length, nonlocal_flux, tke_equation, wall_model, eddy_diffusivity_model) BoundsError: attempt to access 6-element OffsetArray(::Vector{Float64}, 0:5) with eltype Float64 with indices 0:5 at index [6] Stacktrace: [1] throw_boundserror(A::OffsetArrays.OffsetVector{Float64, Vector{Float64}}, I::Tuple{Int64}) @ Base ./essentials.jl:14 [2] checkbounds @ ./abstractarray.jl:699 [inlined] [3] getindex @ ~/.julia/packages/OffsetArrays/b7qpm/src/OffsetArrays.jl:434 [inlined] [4] ∂z @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:361 [inlined] [5] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/KPP.jl:159 [inlined] [6] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/TKEMassFlux.jl:29 [inlined] [7] Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:111 [inlined] [8] oncell @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:461 [inlined] [9] cell_Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:115 [inlined] [10] Cᴷu @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:121 [inlined] [11] KU @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:5 [inlined] [12] #43 @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:157 [inlined] [13] macro expansion @ ./ntuple.jl:72 [inlined] [14] ntuple @ ./ntuple.jl:69 [inlined] [15] update!(solution::OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, m::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedSurfaceTKEFlux{Float64}, Nothing, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.LMDMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, typeof(OceanTurb.TKEMassFlux.prescribed_surface_tke_flux)}}}, Float64}, eqn::Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, bcs::@NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, typeof(OceanTurb.TKEMassFlux.prescribed_surface_tke_flux)}}}) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:151 [16] update! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:162 [inlined] [17] time_step! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:269 [inlined] [18] time_step!(model::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedSurfaceTKEFlux{Float64}, Nothing, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.LMDMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, typeof(OceanTurb.TKEMassFlux.prescribed_surface_tke_flux)}}}, Float64}, Δt::Float64, Nt::Int64) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:18 [19] time_step_tke_mass_flux_model(boundary_layer_depth::OceanTurb.ModularKPP.LMDMixingDepth{Float64}, mixing_length::OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, nonlocal_flux::Nothing, tke_equation::OceanTurb.TKEMassFlux.TKEParameters{Float64}, tke_wall_model::OceanTurb.TKEMassFlux.PrescribedSurfaceTKEFlux{Float64}, eddy_diffusivities::OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}) @ Main ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:21 [20] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [21] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:677 [inlined] [22] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [23] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [24] top-level scope @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:61 testing... OK testing... OK testing... OK TKEMassFlux: Error During Test at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 Test threw exception Expression: time_step_tke_mass_flux_model(boundary_layer_depth, mixing_length, nonlocal_flux, tke_equation, wall_model, eddy_diffusivity_model) BoundsError: attempt to access 6-element OffsetArray(::Vector{Float64}, 0:5) with eltype Float64 with indices 0:5 at index [6] Stacktrace: [1] throw_boundserror(A::OffsetArrays.OffsetVector{Float64, Vector{Float64}}, I::Tuple{Int64}) @ Base ./essentials.jl:14 [2] checkbounds @ ./abstractarray.jl:699 [inlined] [3] getindex @ ~/.julia/packages/OffsetArrays/b7qpm/src/OffsetArrays.jl:434 [inlined] [4] ∂z @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:361 [inlined] [5] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/KPP.jl:159 [inlined] [6] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/TKEMassFlux.jl:29 [inlined] [7] Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:111 [inlined] [8] oncell @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:461 [inlined] [9] cell_Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:115 [inlined] [10] Cᴷu @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:121 [inlined] [11] KU @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:5 [inlined] [12] #43 @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:157 [inlined] [13] macro expansion @ ./ntuple.jl:72 [inlined] [14] ntuple @ ./ntuple.jl:69 [inlined] [15] update!(solution::OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, m::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, Nothing, OceanTurb.ModularKPP.LMDCounterGradientFlux{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.LMDMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, eqn::Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, bcs::@NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:151 [16] update! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:162 [inlined] [17] time_step! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:269 [inlined] [18] time_step!(model::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, Nothing, OceanTurb.ModularKPP.LMDCounterGradientFlux{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.LMDMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, Δt::Float64, Nt::Int64) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:18 [19] time_step_tke_mass_flux_model(boundary_layer_depth::OceanTurb.ModularKPP.LMDMixingDepth{Float64}, mixing_length::OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, nonlocal_flux::OceanTurb.ModularKPP.LMDCounterGradientFlux{Float64}, tke_equation::OceanTurb.TKEMassFlux.TKEParameters{Float64}, tke_wall_model::Nothing, eddy_diffusivities::OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}) @ Main ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:21 [20] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [21] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:677 [inlined] [22] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [23] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [24] top-level scope @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:61 testing... OK testing... OK testing... OK TKEMassFlux: Error During Test at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 Test threw exception Expression: time_step_tke_mass_flux_model(boundary_layer_depth, mixing_length, nonlocal_flux, tke_equation, wall_model, eddy_diffusivity_model) BoundsError: attempt to access 6-element OffsetArray(::Vector{Float64}, 0:5) with eltype Float64 with indices 0:5 at index [6] Stacktrace: [1] throw_boundserror(A::OffsetArrays.OffsetVector{Float64, Vector{Float64}}, I::Tuple{Int64}) @ Base ./essentials.jl:14 [2] checkbounds @ ./abstractarray.jl:699 [inlined] [3] getindex @ ~/.julia/packages/OffsetArrays/b7qpm/src/OffsetArrays.jl:434 [inlined] [4] ∂z @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:361 [inlined] [5] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/KPP.jl:159 [inlined] [6] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/TKEMassFlux.jl:29 [inlined] [7] Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:111 [inlined] [8] oncell @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:461 [inlined] [9] cell_Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:115 [inlined] [10] Cᴷu @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:121 [inlined] [11] KU @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:5 [inlined] [12] #43 @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:157 [inlined] [13] macro expansion @ ./ntuple.jl:72 [inlined] [14] ntuple @ ./ntuple.jl:69 [inlined] [15] update!(solution::OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, m::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedNearWallTKE{Float64}, OceanTurb.ModularKPP.LMDCounterGradientFlux{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.LMDMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, eqn::Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, bcs::@NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:151 [16] update! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:162 [inlined] [17] time_step! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:269 [inlined] [18] time_step!(model::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedNearWallTKE{Float64}, OceanTurb.ModularKPP.LMDCounterGradientFlux{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.LMDMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, Δt::Float64, Nt::Int64) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:18 [19] time_step_tke_mass_flux_model(boundary_layer_depth::OceanTurb.ModularKPP.LMDMixingDepth{Float64}, mixing_length::OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, nonlocal_flux::OceanTurb.ModularKPP.LMDCounterGradientFlux{Float64}, tke_equation::OceanTurb.TKEMassFlux.TKEParameters{Float64}, tke_wall_model::OceanTurb.TKEMassFlux.PrescribedNearWallTKE{Float64}, eddy_diffusivities::OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}) @ Main ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:21 [20] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [21] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:677 [inlined] [22] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [23] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [24] top-level scope @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:61 testing... OK testing... OK testing... OK TKEMassFlux: Error During Test at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 Test threw exception Expression: time_step_tke_mass_flux_model(boundary_layer_depth, mixing_length, nonlocal_flux, tke_equation, wall_model, eddy_diffusivity_model) BoundsError: attempt to access 6-element OffsetArray(::Vector{Float64}, 0:5) with eltype Float64 with indices 0:5 at index [6] Stacktrace: [1] throw_boundserror(A::OffsetArrays.OffsetVector{Float64, Vector{Float64}}, I::Tuple{Int64}) @ Base ./essentials.jl:14 [2] checkbounds @ ./abstractarray.jl:699 [inlined] [3] getindex @ ~/.julia/packages/OffsetArrays/b7qpm/src/OffsetArrays.jl:434 [inlined] [4] ∂z @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:361 [inlined] [5] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/KPP.jl:159 [inlined] [6] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/TKEMassFlux.jl:29 [inlined] [7] Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:111 [inlined] [8] oncell @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:461 [inlined] [9] cell_Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:115 [inlined] [10] Cᴷu @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:121 [inlined] [11] KU @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:5 [inlined] [12] #43 @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:157 [inlined] [13] macro expansion @ ./ntuple.jl:72 [inlined] [14] ntuple @ ./ntuple.jl:69 [inlined] [15] update!(solution::OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, m::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedSurfaceTKEValue{Float64}, OceanTurb.ModularKPP.LMDCounterGradientFlux{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.LMDMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, eqn::Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, bcs::@NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:151 [16] update! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:162 [inlined] [17] time_step! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:269 [inlined] [18] time_step!(model::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedSurfaceTKEValue{Float64}, OceanTurb.ModularKPP.LMDCounterGradientFlux{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.LMDMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, Δt::Float64, Nt::Int64) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:18 [19] time_step_tke_mass_flux_model(boundary_layer_depth::OceanTurb.ModularKPP.LMDMixingDepth{Float64}, mixing_length::OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, nonlocal_flux::OceanTurb.ModularKPP.LMDCounterGradientFlux{Float64}, tke_equation::OceanTurb.TKEMassFlux.TKEParameters{Float64}, tke_wall_model::OceanTurb.TKEMassFlux.PrescribedSurfaceTKEValue{Float64}, eddy_diffusivities::OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}) @ Main ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:21 [20] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [21] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:677 [inlined] [22] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [23] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [24] top-level scope @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:61 testing... OK testing... OK testing... OK TKEMassFlux: Error During Test at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 Test threw exception Expression: time_step_tke_mass_flux_model(boundary_layer_depth, mixing_length, nonlocal_flux, tke_equation, wall_model, eddy_diffusivity_model) BoundsError: attempt to access 6-element OffsetArray(::Vector{Float64}, 0:5) with eltype Float64 with indices 0:5 at index [6] Stacktrace: [1] throw_boundserror(A::OffsetArrays.OffsetVector{Float64, Vector{Float64}}, I::Tuple{Int64}) @ Base ./essentials.jl:14 [2] checkbounds @ ./abstractarray.jl:699 [inlined] [3] getindex @ ~/.julia/packages/OffsetArrays/b7qpm/src/OffsetArrays.jl:434 [inlined] [4] ∂z @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:361 [inlined] [5] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/KPP.jl:159 [inlined] [6] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/TKEMassFlux.jl:29 [inlined] [7] Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:111 [inlined] [8] oncell @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:461 [inlined] [9] cell_Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:115 [inlined] [10] Cᴷu @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:121 [inlined] [11] KU @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:5 [inlined] [12] #43 @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:157 [inlined] [13] macro expansion @ ./ntuple.jl:72 [inlined] [14] ntuple @ ./ntuple.jl:69 [inlined] [15] update!(solution::OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, m::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedSurfaceTKEFlux{Float64}, OceanTurb.ModularKPP.LMDCounterGradientFlux{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.LMDMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, typeof(OceanTurb.TKEMassFlux.prescribed_surface_tke_flux)}}}, Float64}, eqn::Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, bcs::@NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, typeof(OceanTurb.TKEMassFlux.prescribed_surface_tke_flux)}}}) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:151 [16] update! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:162 [inlined] [17] time_step! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:269 [inlined] [18] time_step!(model::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedSurfaceTKEFlux{Float64}, OceanTurb.ModularKPP.LMDCounterGradientFlux{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.LMDMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, typeof(OceanTurb.TKEMassFlux.prescribed_surface_tke_flux)}}}, Float64}, Δt::Float64, Nt::Int64) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:18 [19] time_step_tke_mass_flux_model(boundary_layer_depth::OceanTurb.ModularKPP.LMDMixingDepth{Float64}, mixing_length::OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, nonlocal_flux::OceanTurb.ModularKPP.LMDCounterGradientFlux{Float64}, tke_equation::OceanTurb.TKEMassFlux.TKEParameters{Float64}, tke_wall_model::OceanTurb.TKEMassFlux.PrescribedSurfaceTKEFlux{Float64}, eddy_diffusivities::OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}) @ Main ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:21 [20] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [21] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:677 [inlined] [22] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [23] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [24] top-level scope @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:61 testing... OK testing... OK testing... OK TKEMassFlux: Error During Test at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 Test threw exception Expression: time_step_tke_mass_flux_model(boundary_layer_depth, mixing_length, nonlocal_flux, tke_equation, wall_model, eddy_diffusivity_model) BoundsError: attempt to access 6-element OffsetArray(::Vector{Float64}, 0:5) with eltype Float64 with indices 0:5 at index [6] Stacktrace: [1] throw_boundserror(A::OffsetArrays.OffsetVector{Float64, Vector{Float64}}, I::Tuple{Int64}) @ Base ./essentials.jl:14 [2] checkbounds @ ./abstractarray.jl:699 [inlined] [3] getindex @ ~/.julia/packages/OffsetArrays/b7qpm/src/OffsetArrays.jl:434 [inlined] [4] ∂z @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:361 [inlined] [5] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/KPP.jl:159 [inlined] [6] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/TKEMassFlux.jl:29 [inlined] [7] Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:111 [inlined] [8] oncell @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:461 [inlined] [9] cell_Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:115 [inlined] [10] Cᴷu @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:121 [inlined] [11] KU @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:5 [inlined] [12] #43 @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:157 [inlined] [13] macro expansion @ ./ntuple.jl:72 [inlined] [14] ntuple @ ./ntuple.jl:69 [inlined] [15] update!(solution::OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, m::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, Nothing, OceanTurb.ModularKPP.LMDCounterGradientFlux{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.LMDMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, eqn::Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, bcs::@NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:151 [16] update! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:162 [inlined] [17] time_step! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:269 [inlined] [18] time_step!(model::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, Nothing, OceanTurb.ModularKPP.LMDCounterGradientFlux{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.LMDMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, Δt::Float64, Nt::Int64) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:18 [19] time_step_tke_mass_flux_model(boundary_layer_depth::OceanTurb.ModularKPP.LMDMixingDepth{Float64}, mixing_length::OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, nonlocal_flux::OceanTurb.ModularKPP.LMDCounterGradientFlux{Float64}, tke_equation::OceanTurb.TKEMassFlux.TKEParameters{Float64}, tke_wall_model::Nothing, eddy_diffusivities::OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}) @ Main ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:21 [20] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [21] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:677 [inlined] [22] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [23] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [24] top-level scope @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:61 testing... OK testing... OK testing... OK TKEMassFlux: Error During Test at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 Test threw exception Expression: time_step_tke_mass_flux_model(boundary_layer_depth, mixing_length, nonlocal_flux, tke_equation, wall_model, eddy_diffusivity_model) BoundsError: attempt to access 6-element OffsetArray(::Vector{Float64}, 0:5) with eltype Float64 with indices 0:5 at index [6] Stacktrace: [1] throw_boundserror(A::OffsetArrays.OffsetVector{Float64, Vector{Float64}}, I::Tuple{Int64}) @ Base ./essentials.jl:14 [2] checkbounds @ ./abstractarray.jl:699 [inlined] [3] getindex @ ~/.julia/packages/OffsetArrays/b7qpm/src/OffsetArrays.jl:434 [inlined] [4] ∂z @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:361 [inlined] [5] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/KPP.jl:159 [inlined] [6] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/TKEMassFlux.jl:29 [inlined] [7] Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:111 [inlined] [8] oncell @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:461 [inlined] [9] cell_Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:115 [inlined] [10] Cᴷu @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:121 [inlined] [11] KU @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:5 [inlined] [12] #43 @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:157 [inlined] [13] macro expansion @ ./ntuple.jl:72 [inlined] [14] ntuple @ ./ntuple.jl:69 [inlined] [15] update!(solution::OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, m::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedNearWallTKE{Float64}, OceanTurb.ModularKPP.LMDCounterGradientFlux{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.LMDMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, eqn::Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, bcs::@NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:151 [16] update! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:162 [inlined] [17] time_step! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:269 [inlined] [18] time_step!(model::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedNearWallTKE{Float64}, OceanTurb.ModularKPP.LMDCounterGradientFlux{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.LMDMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, Δt::Float64, Nt::Int64) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:18 [19] time_step_tke_mass_flux_model(boundary_layer_depth::OceanTurb.ModularKPP.LMDMixingDepth{Float64}, mixing_length::OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, nonlocal_flux::OceanTurb.ModularKPP.LMDCounterGradientFlux{Float64}, tke_equation::OceanTurb.TKEMassFlux.TKEParameters{Float64}, tke_wall_model::OceanTurb.TKEMassFlux.PrescribedNearWallTKE{Float64}, eddy_diffusivities::OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}) @ Main ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:21 [20] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [21] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:677 [inlined] [22] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [23] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [24] top-level scope @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:61 testing... OK testing... OK testing... OK TKEMassFlux: Error During Test at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 Test threw exception Expression: time_step_tke_mass_flux_model(boundary_layer_depth, mixing_length, nonlocal_flux, tke_equation, wall_model, eddy_diffusivity_model) BoundsError: attempt to access 6-element OffsetArray(::Vector{Float64}, 0:5) with eltype Float64 with indices 0:5 at index [6] Stacktrace: [1] throw_boundserror(A::OffsetArrays.OffsetVector{Float64, Vector{Float64}}, I::Tuple{Int64}) @ Base ./essentials.jl:14 [2] checkbounds @ ./abstractarray.jl:699 [inlined] [3] getindex @ ~/.julia/packages/OffsetArrays/b7qpm/src/OffsetArrays.jl:434 [inlined] [4] ∂z @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:361 [inlined] [5] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/KPP.jl:159 [inlined] [6] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/TKEMassFlux.jl:29 [inlined] [7] Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:111 [inlined] [8] oncell @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:461 [inlined] [9] cell_Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:115 [inlined] [10] Cᴷu @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:121 [inlined] [11] KU @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:5 [inlined] [12] #43 @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:157 [inlined] [13] macro expansion @ ./ntuple.jl:72 [inlined] [14] ntuple @ ./ntuple.jl:69 [inlined] [15] update!(solution::OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, m::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedSurfaceTKEValue{Float64}, OceanTurb.ModularKPP.LMDCounterGradientFlux{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.LMDMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, eqn::Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, bcs::@NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:151 [16] update! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:162 [inlined] [17] time_step! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:269 [inlined] [18] time_step!(model::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedSurfaceTKEValue{Float64}, OceanTurb.ModularKPP.LMDCounterGradientFlux{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.LMDMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, Δt::Float64, Nt::Int64) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:18 [19] time_step_tke_mass_flux_model(boundary_layer_depth::OceanTurb.ModularKPP.LMDMixingDepth{Float64}, mixing_length::OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, nonlocal_flux::OceanTurb.ModularKPP.LMDCounterGradientFlux{Float64}, tke_equation::OceanTurb.TKEMassFlux.TKEParameters{Float64}, tke_wall_model::OceanTurb.TKEMassFlux.PrescribedSurfaceTKEValue{Float64}, eddy_diffusivities::OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}) @ Main ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:21 [20] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [21] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:677 [inlined] [22] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [23] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [24] top-level scope @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:61 testing... OK testing... OK testing... OK TKEMassFlux: Error During Test at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 Test threw exception Expression: time_step_tke_mass_flux_model(boundary_layer_depth, mixing_length, nonlocal_flux, tke_equation, wall_model, eddy_diffusivity_model) BoundsError: attempt to access 6-element OffsetArray(::Vector{Float64}, 0:5) with eltype Float64 with indices 0:5 at index [6] Stacktrace: [1] throw_boundserror(A::OffsetArrays.OffsetVector{Float64, Vector{Float64}}, I::Tuple{Int64}) @ Base ./essentials.jl:14 [2] checkbounds @ ./abstractarray.jl:699 [inlined] [3] getindex @ ~/.julia/packages/OffsetArrays/b7qpm/src/OffsetArrays.jl:434 [inlined] [4] ∂z @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:361 [inlined] [5] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/KPP.jl:159 [inlined] [6] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/TKEMassFlux.jl:29 [inlined] [7] Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:111 [inlined] [8] oncell @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:461 [inlined] [9] cell_Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:115 [inlined] [10] Cᴷu @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:121 [inlined] [11] KU @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:5 [inlined] [12] #43 @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:157 [inlined] [13] macro expansion @ ./ntuple.jl:72 [inlined] [14] ntuple @ ./ntuple.jl:69 [inlined] [15] update!(solution::OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, m::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedSurfaceTKEFlux{Float64}, OceanTurb.ModularKPP.LMDCounterGradientFlux{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.LMDMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, typeof(OceanTurb.TKEMassFlux.prescribed_surface_tke_flux)}}}, Float64}, eqn::Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, bcs::@NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, typeof(OceanTurb.TKEMassFlux.prescribed_surface_tke_flux)}}}) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:151 [16] update! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:162 [inlined] [17] time_step! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:269 [inlined] [18] time_step!(model::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedSurfaceTKEFlux{Float64}, OceanTurb.ModularKPP.LMDCounterGradientFlux{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.LMDMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, typeof(OceanTurb.TKEMassFlux.prescribed_surface_tke_flux)}}}, Float64}, Δt::Float64, Nt::Int64) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:18 [19] time_step_tke_mass_flux_model(boundary_layer_depth::OceanTurb.ModularKPP.LMDMixingDepth{Float64}, mixing_length::OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, nonlocal_flux::OceanTurb.ModularKPP.LMDCounterGradientFlux{Float64}, tke_equation::OceanTurb.TKEMassFlux.TKEParameters{Float64}, tke_wall_model::OceanTurb.TKEMassFlux.PrescribedSurfaceTKEFlux{Float64}, eddy_diffusivities::OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}) @ Main ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:21 [20] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [21] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:677 [inlined] [22] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [23] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [24] top-level scope @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:61 testing... OK testing... OK testing... OK TKEMassFlux: Error During Test at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 Test threw exception Expression: time_step_tke_mass_flux_model(boundary_layer_depth, mixing_length, nonlocal_flux, tke_equation, wall_model, eddy_diffusivity_model) BoundsError: attempt to access 6-element OffsetArray(::Vector{Float64}, 0:5) with eltype Float64 with indices 0:5 at index [6] Stacktrace: [1] throw_boundserror(A::OffsetArrays.OffsetVector{Float64, Vector{Float64}}, I::Tuple{Int64}) @ Base ./essentials.jl:14 [2] checkbounds @ ./abstractarray.jl:699 [inlined] [3] getindex @ ~/.julia/packages/OffsetArrays/b7qpm/src/OffsetArrays.jl:434 [inlined] [4] ∂z @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:361 [inlined] [5] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/KPP.jl:159 [inlined] [6] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/TKEMassFlux.jl:29 [inlined] [7] Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:111 [inlined] [8] oncell @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:461 [inlined] [9] cell_Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:115 [inlined] [10] Cᴷu @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:121 [inlined] [11] KU @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:5 [inlined] [12] #43 @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:157 [inlined] [13] macro expansion @ ./ntuple.jl:72 [inlined] [14] ntuple @ ./ntuple.jl:69 [inlined] [15] update!(solution::OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, m::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, Nothing, OceanTurb.ModularKPP.SiebesmaDiagnosticPlumeModel{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.LMDMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, eqn::Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, bcs::@NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:151 [16] update! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:162 [inlined] [17] time_step! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:269 [inlined] [18] time_step!(model::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, Nothing, OceanTurb.ModularKPP.SiebesmaDiagnosticPlumeModel{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.LMDMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, Δt::Float64, Nt::Int64) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:18 [19] time_step_tke_mass_flux_model(boundary_layer_depth::OceanTurb.ModularKPP.LMDMixingDepth{Float64}, mixing_length::OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, nonlocal_flux::OceanTurb.ModularKPP.SiebesmaDiagnosticPlumeModel{Float64}, tke_equation::OceanTurb.TKEMassFlux.TKEParameters{Float64}, tke_wall_model::Nothing, eddy_diffusivities::OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}) @ Main ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:21 [20] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [21] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:677 [inlined] [22] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [23] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [24] top-level scope @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:61 testing... OK testing... OK testing... OK TKEMassFlux: Error During Test at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 Test threw exception Expression: time_step_tke_mass_flux_model(boundary_layer_depth, mixing_length, nonlocal_flux, tke_equation, wall_model, eddy_diffusivity_model) BoundsError: attempt to access 6-element OffsetArray(::Vector{Float64}, 0:5) with eltype Float64 with indices 0:5 at index [6] Stacktrace: [1] throw_boundserror(A::OffsetArrays.OffsetVector{Float64, Vector{Float64}}, I::Tuple{Int64}) @ Base ./essentials.jl:14 [2] checkbounds @ ./abstractarray.jl:699 [inlined] [3] getindex @ ~/.julia/packages/OffsetArrays/b7qpm/src/OffsetArrays.jl:434 [inlined] [4] ∂z @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:361 [inlined] [5] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/KPP.jl:159 [inlined] [6] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/TKEMassFlux.jl:29 [inlined] [7] Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:111 [inlined] [8] oncell @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:461 [inlined] [9] cell_Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:115 [inlined] [10] Cᴷu @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:121 [inlined] [11] KU @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:5 [inlined] [12] #43 @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:157 [inlined] [13] macro expansion @ ./ntuple.jl:72 [inlined] [14] ntuple @ ./ntuple.jl:69 [inlined] [15] update!(solution::OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, m::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedNearWallTKE{Float64}, OceanTurb.ModularKPP.SiebesmaDiagnosticPlumeModel{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.LMDMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, eqn::Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, bcs::@NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:151 [16] update! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:162 [inlined] [17] time_step! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:269 [inlined] [18] time_step!(model::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedNearWallTKE{Float64}, OceanTurb.ModularKPP.SiebesmaDiagnosticPlumeModel{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.LMDMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, Δt::Float64, Nt::Int64) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:18 [19] time_step_tke_mass_flux_model(boundary_layer_depth::OceanTurb.ModularKPP.LMDMixingDepth{Float64}, mixing_length::OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, nonlocal_flux::OceanTurb.ModularKPP.SiebesmaDiagnosticPlumeModel{Float64}, tke_equation::OceanTurb.TKEMassFlux.TKEParameters{Float64}, tke_wall_model::OceanTurb.TKEMassFlux.PrescribedNearWallTKE{Float64}, eddy_diffusivities::OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}) @ Main ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:21 [20] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [21] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:677 [inlined] [22] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [23] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [24] top-level scope @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:61 testing... OK testing... OK testing... OK TKEMassFlux: Error During Test at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 Test threw exception Expression: time_step_tke_mass_flux_model(boundary_layer_depth, mixing_length, nonlocal_flux, tke_equation, wall_model, eddy_diffusivity_model) BoundsError: attempt to access 6-element OffsetArray(::Vector{Float64}, 0:5) with eltype Float64 with indices 0:5 at index [6] Stacktrace: [1] throw_boundserror(A::OffsetArrays.OffsetVector{Float64, Vector{Float64}}, I::Tuple{Int64}) @ Base ./essentials.jl:14 [2] checkbounds @ ./abstractarray.jl:699 [inlined] [3] getindex @ ~/.julia/packages/OffsetArrays/b7qpm/src/OffsetArrays.jl:434 [inlined] [4] ∂z @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:361 [inlined] [5] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/KPP.jl:159 [inlined] [6] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/TKEMassFlux.jl:29 [inlined] [7] Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:111 [inlined] [8] oncell @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:461 [inlined] [9] cell_Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:115 [inlined] [10] Cᴷu @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:121 [inlined] [11] KU @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:5 [inlined] [12] #43 @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:157 [inlined] [13] macro expansion @ ./ntuple.jl:72 [inlined] [14] ntuple @ ./ntuple.jl:69 [inlined] [15] update!(solution::OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, m::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedSurfaceTKEValue{Float64}, OceanTurb.ModularKPP.SiebesmaDiagnosticPlumeModel{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.LMDMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, eqn::Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, bcs::@NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:151 [16] update! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:162 [inlined] [17] time_step! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:269 [inlined] [18] time_step!(model::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedSurfaceTKEValue{Float64}, OceanTurb.ModularKPP.SiebesmaDiagnosticPlumeModel{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.LMDMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, Δt::Float64, Nt::Int64) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:18 [19] time_step_tke_mass_flux_model(boundary_layer_depth::OceanTurb.ModularKPP.LMDMixingDepth{Float64}, mixing_length::OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, nonlocal_flux::OceanTurb.ModularKPP.SiebesmaDiagnosticPlumeModel{Float64}, tke_equation::OceanTurb.TKEMassFlux.TKEParameters{Float64}, tke_wall_model::OceanTurb.TKEMassFlux.PrescribedSurfaceTKEValue{Float64}, eddy_diffusivities::OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}) @ Main ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:21 [20] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [21] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:677 [inlined] [22] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [23] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [24] top-level scope @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:61 testing... OK testing... OK testing... OK TKEMassFlux: Error During Test at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 Test threw exception Expression: time_step_tke_mass_flux_model(boundary_layer_depth, mixing_length, nonlocal_flux, tke_equation, wall_model, eddy_diffusivity_model) BoundsError: attempt to access 6-element OffsetArray(::Vector{Float64}, 0:5) with eltype Float64 with indices 0:5 at index [6] Stacktrace: [1] throw_boundserror(A::OffsetArrays.OffsetVector{Float64, Vector{Float64}}, I::Tuple{Int64}) @ Base ./essentials.jl:14 [2] checkbounds @ ./abstractarray.jl:699 [inlined] [3] getindex @ ~/.julia/packages/OffsetArrays/b7qpm/src/OffsetArrays.jl:434 [inlined] [4] ∂z @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:361 [inlined] [5] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/KPP.jl:159 [inlined] [6] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/TKEMassFlux.jl:29 [inlined] [7] Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:111 [inlined] [8] oncell @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:461 [inlined] [9] cell_Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:115 [inlined] [10] Cᴷu @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:121 [inlined] [11] KU @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:5 [inlined] [12] #43 @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:157 [inlined] [13] macro expansion @ ./ntuple.jl:72 [inlined] [14] ntuple @ ./ntuple.jl:69 [inlined] [15] update!(solution::OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, m::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedSurfaceTKEFlux{Float64}, OceanTurb.ModularKPP.SiebesmaDiagnosticPlumeModel{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.LMDMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, typeof(OceanTurb.TKEMassFlux.prescribed_surface_tke_flux)}}}, Float64}, eqn::Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, bcs::@NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, typeof(OceanTurb.TKEMassFlux.prescribed_surface_tke_flux)}}}) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:151 [16] update! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:162 [inlined] [17] time_step! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:269 [inlined] [18] time_step!(model::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedSurfaceTKEFlux{Float64}, OceanTurb.ModularKPP.SiebesmaDiagnosticPlumeModel{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.LMDMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, typeof(OceanTurb.TKEMassFlux.prescribed_surface_tke_flux)}}}, Float64}, Δt::Float64, Nt::Int64) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:18 [19] time_step_tke_mass_flux_model(boundary_layer_depth::OceanTurb.ModularKPP.LMDMixingDepth{Float64}, mixing_length::OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, nonlocal_flux::OceanTurb.ModularKPP.SiebesmaDiagnosticPlumeModel{Float64}, tke_equation::OceanTurb.TKEMassFlux.TKEParameters{Float64}, tke_wall_model::OceanTurb.TKEMassFlux.PrescribedSurfaceTKEFlux{Float64}, eddy_diffusivities::OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}) @ Main ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:21 [20] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [21] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:677 [inlined] [22] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [23] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [24] top-level scope @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:61 testing... OK testing... OK testing... OK TKEMassFlux: Error During Test at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 Test threw exception Expression: time_step_tke_mass_flux_model(boundary_layer_depth, mixing_length, nonlocal_flux, tke_equation, wall_model, eddy_diffusivity_model) BoundsError: attempt to access 6-element OffsetArray(::Vector{Float64}, 0:5) with eltype Float64 with indices 0:5 at index [6] Stacktrace: [1] throw_boundserror(A::OffsetArrays.OffsetVector{Float64, Vector{Float64}}, I::Tuple{Int64}) @ Base ./essentials.jl:14 [2] checkbounds @ ./abstractarray.jl:699 [inlined] [3] getindex @ ~/.julia/packages/OffsetArrays/b7qpm/src/OffsetArrays.jl:434 [inlined] [4] ∂z @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:361 [inlined] [5] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/KPP.jl:159 [inlined] [6] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/TKEMassFlux.jl:29 [inlined] [7] Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:111 [inlined] [8] oncell @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:461 [inlined] [9] cell_Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:115 [inlined] [10] Cᴷu @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:121 [inlined] [11] KU @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:5 [inlined] [12] #43 @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:157 [inlined] [13] macro expansion @ ./ntuple.jl:72 [inlined] [14] ntuple @ ./ntuple.jl:69 [inlined] [15] update!(solution::OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, m::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, Nothing, OceanTurb.ModularKPP.SiebesmaDiagnosticPlumeModel{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.LMDMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, eqn::Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, bcs::@NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:151 [16] update! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:162 [inlined] [17] time_step! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:269 [inlined] [18] time_step!(model::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, Nothing, OceanTurb.ModularKPP.SiebesmaDiagnosticPlumeModel{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.LMDMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, Δt::Float64, Nt::Int64) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:18 [19] time_step_tke_mass_flux_model(boundary_layer_depth::OceanTurb.ModularKPP.LMDMixingDepth{Float64}, mixing_length::OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, nonlocal_flux::OceanTurb.ModularKPP.SiebesmaDiagnosticPlumeModel{Float64}, tke_equation::OceanTurb.TKEMassFlux.TKEParameters{Float64}, tke_wall_model::Nothing, eddy_diffusivities::OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}) @ Main ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:21 [20] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [21] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:677 [inlined] [22] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [23] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [24] top-level scope @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:61 testing... OK testing... OK testing... OK TKEMassFlux: Error During Test at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 Test threw exception Expression: time_step_tke_mass_flux_model(boundary_layer_depth, mixing_length, nonlocal_flux, tke_equation, wall_model, eddy_diffusivity_model) BoundsError: attempt to access 6-element OffsetArray(::Vector{Float64}, 0:5) with eltype Float64 with indices 0:5 at index [6] Stacktrace: [1] throw_boundserror(A::OffsetArrays.OffsetVector{Float64, Vector{Float64}}, I::Tuple{Int64}) @ Base ./essentials.jl:14 [2] checkbounds @ ./abstractarray.jl:699 [inlined] [3] getindex @ ~/.julia/packages/OffsetArrays/b7qpm/src/OffsetArrays.jl:434 [inlined] [4] ∂z @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:361 [inlined] [5] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/KPP.jl:159 [inlined] [6] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/TKEMassFlux.jl:29 [inlined] [7] Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:111 [inlined] [8] oncell @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:461 [inlined] [9] cell_Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:115 [inlined] [10] Cᴷu @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:121 [inlined] [11] KU @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:5 [inlined] [12] #43 @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:157 [inlined] [13] macro expansion @ ./ntuple.jl:72 [inlined] [14] ntuple @ ./ntuple.jl:69 [inlined] [15] update!(solution::OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, m::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedNearWallTKE{Float64}, OceanTurb.ModularKPP.SiebesmaDiagnosticPlumeModel{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.LMDMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, eqn::Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, bcs::@NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:151 [16] update! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:162 [inlined] [17] time_step! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:269 [inlined] [18] time_step!(model::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedNearWallTKE{Float64}, OceanTurb.ModularKPP.SiebesmaDiagnosticPlumeModel{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.LMDMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, Δt::Float64, Nt::Int64) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:18 [19] time_step_tke_mass_flux_model(boundary_layer_depth::OceanTurb.ModularKPP.LMDMixingDepth{Float64}, mixing_length::OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, nonlocal_flux::OceanTurb.ModularKPP.SiebesmaDiagnosticPlumeModel{Float64}, tke_equation::OceanTurb.TKEMassFlux.TKEParameters{Float64}, tke_wall_model::OceanTurb.TKEMassFlux.PrescribedNearWallTKE{Float64}, eddy_diffusivities::OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}) @ Main ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:21 [20] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [21] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:677 [inlined] [22] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [23] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [24] top-level scope @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:61 testing... OK testing... OK testing... OK TKEMassFlux: Error During Test at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 Test threw exception Expression: time_step_tke_mass_flux_model(boundary_layer_depth, mixing_length, nonlocal_flux, tke_equation, wall_model, eddy_diffusivity_model) BoundsError: attempt to access 6-element OffsetArray(::Vector{Float64}, 0:5) with eltype Float64 with indices 0:5 at index [6] Stacktrace: [1] throw_boundserror(A::OffsetArrays.OffsetVector{Float64, Vector{Float64}}, I::Tuple{Int64}) @ Base ./essentials.jl:14 [2] checkbounds @ ./abstractarray.jl:699 [inlined] [3] getindex @ ~/.julia/packages/OffsetArrays/b7qpm/src/OffsetArrays.jl:434 [inlined] [4] ∂z @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:361 [inlined] [5] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/KPP.jl:159 [inlined] [6] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/TKEMassFlux.jl:29 [inlined] [7] Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:111 [inlined] [8] oncell @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:461 [inlined] [9] cell_Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:115 [inlined] [10] Cᴷu @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:121 [inlined] [11] KU @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:5 [inlined] [12] #43 @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:157 [inlined] [13] macro expansion @ ./ntuple.jl:72 [inlined] [14] ntuple @ ./ntuple.jl:69 [inlined] [15] update!(solution::OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, m::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedSurfaceTKEValue{Float64}, OceanTurb.ModularKPP.SiebesmaDiagnosticPlumeModel{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.LMDMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, eqn::Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, bcs::@NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:151 [16] update! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:162 [inlined] [17] time_step! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:269 [inlined] [18] time_step!(model::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedSurfaceTKEValue{Float64}, OceanTurb.ModularKPP.SiebesmaDiagnosticPlumeModel{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.LMDMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, Δt::Float64, Nt::Int64) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:18 [19] time_step_tke_mass_flux_model(boundary_layer_depth::OceanTurb.ModularKPP.LMDMixingDepth{Float64}, mixing_length::OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, nonlocal_flux::OceanTurb.ModularKPP.SiebesmaDiagnosticPlumeModel{Float64}, tke_equation::OceanTurb.TKEMassFlux.TKEParameters{Float64}, tke_wall_model::OceanTurb.TKEMassFlux.PrescribedSurfaceTKEValue{Float64}, eddy_diffusivities::OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}) @ Main ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:21 [20] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [21] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:677 [inlined] [22] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [23] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [24] top-level scope @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:61 testing... OK testing... OK testing... OK TKEMassFlux: Error During Test at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 Test threw exception Expression: time_step_tke_mass_flux_model(boundary_layer_depth, mixing_length, nonlocal_flux, tke_equation, wall_model, eddy_diffusivity_model) BoundsError: attempt to access 6-element OffsetArray(::Vector{Float64}, 0:5) with eltype Float64 with indices 0:5 at index [6] Stacktrace: [1] throw_boundserror(A::OffsetArrays.OffsetVector{Float64, Vector{Float64}}, I::Tuple{Int64}) @ Base ./essentials.jl:14 [2] checkbounds @ ./abstractarray.jl:699 [inlined] [3] getindex @ ~/.julia/packages/OffsetArrays/b7qpm/src/OffsetArrays.jl:434 [inlined] [4] ∂z @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:361 [inlined] [5] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/KPP.jl:159 [inlined] [6] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/TKEMassFlux.jl:29 [inlined] [7] Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:111 [inlined] [8] oncell @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:461 [inlined] [9] cell_Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:115 [inlined] [10] Cᴷu @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:121 [inlined] [11] KU @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:5 [inlined] [12] #43 @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:157 [inlined] [13] macro expansion @ ./ntuple.jl:72 [inlined] [14] ntuple @ ./ntuple.jl:69 [inlined] [15] update!(solution::OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, m::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedSurfaceTKEFlux{Float64}, OceanTurb.ModularKPP.SiebesmaDiagnosticPlumeModel{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.LMDMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, typeof(OceanTurb.TKEMassFlux.prescribed_surface_tke_flux)}}}, Float64}, eqn::Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, bcs::@NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, typeof(OceanTurb.TKEMassFlux.prescribed_surface_tke_flux)}}}) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:151 [16] update! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:162 [inlined] [17] time_step! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:269 [inlined] [18] time_step!(model::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedSurfaceTKEFlux{Float64}, OceanTurb.ModularKPP.SiebesmaDiagnosticPlumeModel{Float64}, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.LMDMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, typeof(OceanTurb.TKEMassFlux.prescribed_surface_tke_flux)}}}, Float64}, Δt::Float64, Nt::Int64) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:18 [19] time_step_tke_mass_flux_model(boundary_layer_depth::OceanTurb.ModularKPP.LMDMixingDepth{Float64}, mixing_length::OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, nonlocal_flux::OceanTurb.ModularKPP.SiebesmaDiagnosticPlumeModel{Float64}, tke_equation::OceanTurb.TKEMassFlux.TKEParameters{Float64}, tke_wall_model::OceanTurb.TKEMassFlux.PrescribedSurfaceTKEFlux{Float64}, eddy_diffusivities::OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}) @ Main ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:21 [20] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [21] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:677 [inlined] [22] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [23] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [24] top-level scope @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:61 testing... OK testing... OK testing... OK TKEMassFlux: Error During Test at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 Test threw exception Expression: time_step_tke_mass_flux_model(boundary_layer_depth, mixing_length, nonlocal_flux, tke_equation, wall_model, eddy_diffusivity_model) BoundsError: attempt to access 6-element OffsetArray(::Vector{Float64}, 0:5) with eltype Float64 with indices 0:5 at index [6] Stacktrace: [1] throw_boundserror(A::OffsetArrays.OffsetVector{Float64, Vector{Float64}}, I::Tuple{Int64}) @ Base ./essentials.jl:14 [2] checkbounds @ ./abstractarray.jl:699 [inlined] [3] getindex @ ~/.julia/packages/OffsetArrays/b7qpm/src/OffsetArrays.jl:434 [inlined] [4] ∂z @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:361 [inlined] [5] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/KPP.jl:159 [inlined] [6] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/TKEMassFlux.jl:29 [inlined] [7] Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:111 [inlined] [8] oncell @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:461 [inlined] [9] cell_Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:115 [inlined] [10] Cᴷu @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:121 [inlined] [11] KU @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:5 [inlined] [12] #43 @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:157 [inlined] [13] macro expansion @ ./ntuple.jl:72 [inlined] [14] ntuple @ ./ntuple.jl:69 [inlined] [15] update!(solution::OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, m::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, Nothing, Nothing, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.ROMSMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, eqn::Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, bcs::@NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:151 [16] update! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:162 [inlined] [17] time_step! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:269 [inlined] [18] time_step!(model::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, Nothing, Nothing, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.ROMSMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, Δt::Float64, Nt::Int64) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:18 [19] time_step_tke_mass_flux_model(boundary_layer_depth::OceanTurb.ModularKPP.ROMSMixingDepth{Float64}, mixing_length::OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, nonlocal_flux::Nothing, tke_equation::OceanTurb.TKEMassFlux.TKEParameters{Float64}, tke_wall_model::Nothing, eddy_diffusivities::OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}) @ Main ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:21 [20] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [21] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:677 [inlined] [22] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [23] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [24] top-level scope @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:61 testing... OK testing... OK testing... OK TKEMassFlux: Error During Test at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 Test threw exception Expression: time_step_tke_mass_flux_model(boundary_layer_depth, mixing_length, nonlocal_flux, tke_equation, wall_model, eddy_diffusivity_model) BoundsError: attempt to access 6-element OffsetArray(::Vector{Float64}, 0:5) with eltype Float64 with indices 0:5 at index [6] Stacktrace: [1] throw_boundserror(A::OffsetArrays.OffsetVector{Float64, Vector{Float64}}, I::Tuple{Int64}) @ Base ./essentials.jl:14 [2] checkbounds @ ./abstractarray.jl:699 [inlined] [3] getindex @ ~/.julia/packages/OffsetArrays/b7qpm/src/OffsetArrays.jl:434 [inlined] [4] ∂z @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:361 [inlined] [5] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/KPP.jl:159 [inlined] [6] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/TKEMassFlux.jl:29 [inlined] [7] Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:111 [inlined] [8] oncell @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:461 [inlined] [9] cell_Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:115 [inlined] [10] Cᴷu @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:121 [inlined] [11] KU @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:5 [inlined] [12] #43 @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:157 [inlined] [13] macro expansion @ ./ntuple.jl:72 [inlined] [14] ntuple @ ./ntuple.jl:69 [inlined] [15] update!(solution::OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, m::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedNearWallTKE{Float64}, Nothing, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.ROMSMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, eqn::Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, bcs::@NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:151 [16] update! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:162 [inlined] [17] time_step! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:269 [inlined] [18] time_step!(model::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedNearWallTKE{Float64}, Nothing, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.ROMSMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, Δt::Float64, Nt::Int64) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:18 [19] time_step_tke_mass_flux_model(boundary_layer_depth::OceanTurb.ModularKPP.ROMSMixingDepth{Float64}, mixing_length::OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, nonlocal_flux::Nothing, tke_equation::OceanTurb.TKEMassFlux.TKEParameters{Float64}, tke_wall_model::OceanTurb.TKEMassFlux.PrescribedNearWallTKE{Float64}, eddy_diffusivities::OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}) @ Main ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:21 [20] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [21] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:677 [inlined] [22] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [23] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [24] top-level scope @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:61 testing... OK testing... OK testing... OK TKEMassFlux: Error During Test at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 Test threw exception Expression: time_step_tke_mass_flux_model(boundary_layer_depth, mixing_length, nonlocal_flux, tke_equation, wall_model, eddy_diffusivity_model) BoundsError: attempt to access 6-element OffsetArray(::Vector{Float64}, 0:5) with eltype Float64 with indices 0:5 at index [6] Stacktrace: [1] throw_boundserror(A::OffsetArrays.OffsetVector{Float64, Vector{Float64}}, I::Tuple{Int64}) @ Base ./essentials.jl:14 [2] checkbounds @ ./abstractarray.jl:699 [inlined] [3] getindex @ ~/.julia/packages/OffsetArrays/b7qpm/src/OffsetArrays.jl:434 [inlined] [4] ∂z @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:361 [inlined] [5] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/KPP.jl:159 [inlined] [6] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/TKEMassFlux.jl:29 [inlined] [7] Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:111 [inlined] [8] oncell @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:461 [inlined] [9] cell_Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:115 [inlined] [10] Cᴷu @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:121 [inlined] [11] KU @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:5 [inlined] [12] #43 @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:157 [inlined] [13] macro expansion @ ./ntuple.jl:72 [inlined] [14] ntuple @ ./ntuple.jl:69 [inlined] [15] update!(solution::OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, m::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedSurfaceTKEValue{Float64}, Nothing, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.ROMSMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, eqn::Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, bcs::@NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:151 [16] update! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:162 [inlined] [17] time_step! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:269 [inlined] [18] time_step!(model::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedSurfaceTKEValue{Float64}, Nothing, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.ROMSMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, Δt::Float64, Nt::Int64) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:18 [19] time_step_tke_mass_flux_model(boundary_layer_depth::OceanTurb.ModularKPP.ROMSMixingDepth{Float64}, mixing_length::OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, nonlocal_flux::Nothing, tke_equation::OceanTurb.TKEMassFlux.TKEParameters{Float64}, tke_wall_model::OceanTurb.TKEMassFlux.PrescribedSurfaceTKEValue{Float64}, eddy_diffusivities::OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}) @ Main ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:21 [20] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [21] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:677 [inlined] [22] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [23] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [24] top-level scope @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:61 testing... OK testing... OK testing... OK TKEMassFlux: Error During Test at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 Test threw exception Expression: time_step_tke_mass_flux_model(boundary_layer_depth, mixing_length, nonlocal_flux, tke_equation, wall_model, eddy_diffusivity_model) BoundsError: attempt to access 6-element OffsetArray(::Vector{Float64}, 0:5) with eltype Float64 with indices 0:5 at index [6] Stacktrace: [1] throw_boundserror(A::OffsetArrays.OffsetVector{Float64, Vector{Float64}}, I::Tuple{Int64}) @ Base ./essentials.jl:14 [2] checkbounds @ ./abstractarray.jl:699 [inlined] [3] getindex @ ~/.julia/packages/OffsetArrays/b7qpm/src/OffsetArrays.jl:434 [inlined] [4] ∂z @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:361 [inlined] [5] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/KPP.jl:159 [inlined] [6] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/TKEMassFlux.jl:29 [inlined] [7] Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:111 [inlined] [8] oncell @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:461 [inlined] [9] cell_Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:115 [inlined] [10] Cᴷu @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:121 [inlined] [11] KU @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:5 [inlined] [12] #43 @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:157 [inlined] [13] macro expansion @ ./ntuple.jl:72 [inlined] [14] ntuple @ ./ntuple.jl:69 [inlined] [15] update!(solution::OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, m::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedSurfaceTKEFlux{Float64}, Nothing, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.ROMSMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, typeof(OceanTurb.TKEMassFlux.prescribed_surface_tke_flux)}}}, Float64}, eqn::Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, bcs::@NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, typeof(OceanTurb.TKEMassFlux.prescribed_surface_tke_flux)}}}) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:151 [16] update! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:162 [inlined] [17] time_step! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:269 [inlined] [18] time_step!(model::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedSurfaceTKEFlux{Float64}, Nothing, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.ROMSMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, typeof(OceanTurb.TKEMassFlux.prescribed_surface_tke_flux)}}}, Float64}, Δt::Float64, Nt::Int64) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:18 [19] time_step_tke_mass_flux_model(boundary_layer_depth::OceanTurb.ModularKPP.ROMSMixingDepth{Float64}, mixing_length::OceanTurb.TKEMassFlux.SimpleMixingLength{Float64}, nonlocal_flux::Nothing, tke_equation::OceanTurb.TKEMassFlux.TKEParameters{Float64}, tke_wall_model::OceanTurb.TKEMassFlux.PrescribedSurfaceTKEFlux{Float64}, eddy_diffusivities::OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}) @ Main ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:21 [20] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [21] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:677 [inlined] [22] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [23] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [24] top-level scope @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:61 testing... OK testing... OK testing... OK TKEMassFlux: Error During Test at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 Test threw exception Expression: time_step_tke_mass_flux_model(boundary_layer_depth, mixing_length, nonlocal_flux, tke_equation, wall_model, eddy_diffusivity_model) BoundsError: attempt to access 6-element OffsetArray(::Vector{Float64}, 0:5) with eltype Float64 with indices 0:5 at index [6] Stacktrace: [1] throw_boundserror(A::OffsetArrays.OffsetVector{Float64, Vector{Float64}}, I::Tuple{Int64}) @ Base ./essentials.jl:14 [2] checkbounds @ ./abstractarray.jl:699 [inlined] [3] getindex @ ~/.julia/packages/OffsetArrays/b7qpm/src/OffsetArrays.jl:434 [inlined] [4] ∂z @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:361 [inlined] [5] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/KPP.jl:159 [inlined] [6] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/TKEMassFlux.jl:29 [inlined] [7] Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:111 [inlined] [8] oncell @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:461 [inlined] [9] cell_Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:115 [inlined] [10] Cᴷu @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:121 [inlined] [11] KU @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:5 [inlined] [12] #43 @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:157 [inlined] [13] macro expansion @ ./ntuple.jl:72 [inlined] [14] ntuple @ ./ntuple.jl:69 [inlined] [15] update!(solution::OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, m::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, Nothing, Nothing, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.ROMSMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, eqn::Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, bcs::@NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:151 [16] update! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:162 [inlined] [17] time_step! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:269 [inlined] [18] time_step!(model::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, Nothing, Nothing, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.ROMSMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, Δt::Float64, Nt::Int64) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:18 [19] time_step_tke_mass_flux_model(boundary_layer_depth::OceanTurb.ModularKPP.ROMSMixingDepth{Float64}, mixing_length::OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, nonlocal_flux::Nothing, tke_equation::OceanTurb.TKEMassFlux.TKEParameters{Float64}, tke_wall_model::Nothing, eddy_diffusivities::OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}) @ Main ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:21 [20] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [21] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:677 [inlined] [22] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [23] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [24] top-level scope @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:61 testing... OK testing... OK testing... OK TKEMassFlux: Error During Test at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 Test threw exception Expression: time_step_tke_mass_flux_model(boundary_layer_depth, mixing_length, nonlocal_flux, tke_equation, wall_model, eddy_diffusivity_model) BoundsError: attempt to access 6-element OffsetArray(::Vector{Float64}, 0:5) with eltype Float64 with indices 0:5 at index [6] Stacktrace: [1] throw_boundserror(A::OffsetArrays.OffsetVector{Float64, Vector{Float64}}, I::Tuple{Int64}) @ Base ./essentials.jl:14 [2] checkbounds @ ./abstractarray.jl:699 [inlined] [3] getindex @ ~/.julia/packages/OffsetArrays/b7qpm/src/OffsetArrays.jl:434 [inlined] [4] ∂z @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:361 [inlined] [5] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/KPP.jl:159 [inlined] [6] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/TKEMassFlux.jl:29 [inlined] [7] Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:111 [inlined] [8] oncell @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:461 [inlined] [9] cell_Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:115 [inlined] [10] Cᴷu @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:121 [inlined] [11] KU @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:5 [inlined] [12] #43 @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:157 [inlined] [13] macro expansion @ ./ntuple.jl:72 [inlined] [14] ntuple @ ./ntuple.jl:69 [inlined] [15] update!(solution::OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, m::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedNearWallTKE{Float64}, Nothing, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.ROMSMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, eqn::Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, bcs::@NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:151 [16] update! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:162 [inlined] [17] time_step! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:269 [inlined] [18] time_step!(model::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedNearWallTKE{Float64}, Nothing, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.ROMSMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, Δt::Float64, Nt::Int64) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:18 [19] time_step_tke_mass_flux_model(boundary_layer_depth::OceanTurb.ModularKPP.ROMSMixingDepth{Float64}, mixing_length::OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, nonlocal_flux::Nothing, tke_equation::OceanTurb.TKEMassFlux.TKEParameters{Float64}, tke_wall_model::OceanTurb.TKEMassFlux.PrescribedNearWallTKE{Float64}, eddy_diffusivities::OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}) @ Main ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:21 [20] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [21] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:677 [inlined] [22] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [23] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [24] top-level scope @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:61 testing... OK testing... OK testing... OK ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 285 running 1 of 1 signal (10): User defined signal 1 _ZN12_GLOBAL__N_18Verifier27visitAliasScopeListMetadataEPKN4llvm6MDNodeE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN12_GLOBAL__N_18Verifier16visitInstructionERN4llvm11InstructionE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN12_GLOBAL__N_18Verifier6verifyERKN4llvm8FunctionE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm12verifyModuleERKNS_6ModuleEPNS_11raw_ostreamEPb at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm16VerifierAnalysis3runERNS_6ModuleERNS_15AnalysisManagerIS1_JEEE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm6detail17AnalysisPassModelINS_6ModuleENS_16VerifierAnalysisENS_17PreservedAnalysesENS_15AnalysisManagerIS2_JEE11InvalidatorEJEE3runERS2_RS6_ at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm15AnalysisManagerINS_6ModuleEJEE13getResultImplEPNS_11AnalysisKeyERS1_ at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm12VerifierPass3runERNS_6ModuleERNS_15AnalysisManagerIS1_JEEE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) run at /source/usr/include/llvm/IR/PassManagerInternal.h:89 _ZN4llvm11PassManagerINS_6ModuleENS_15AnalysisManagerIS1_JEEEJEE3runERS1_RS3_ at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) run at /source/src/pipeline.cpp:777 operator() at /source/src/jitlayers.cpp:1298 withModuleDo<(anonymous namespace)::OptimizerT::operator()(llvm::orc::ThreadSafeModule, llvm::orc::MaterializationResponsibility&) [with long unsigned int N = 4]:: > at /source/usr/include/llvm/ExecutionEngine/Orc/ThreadSafeModule.h:136 [inlined] operator() at /source/src/jitlayers.cpp:1259 [inlined] CallImpl<(anonymous namespace)::OptimizerT<4> > at /source/usr/include/llvm/ADT/FunctionExtras.h:221 _ZN4llvm3orc16IRTransformLayer4emitESt10unique_ptrINS0_29MaterializationResponsibilityESt14default_deleteIS3_EENS0_16ThreadSafeModuleE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16IRTransformLayer4emitESt10unique_ptrINS0_29MaterializationResponsibilityESt14default_deleteIS3_EENS0_16ThreadSafeModuleE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16IRTransformLayer4emitESt10unique_ptrINS0_29MaterializationResponsibilityESt14default_deleteIS3_EENS0_16ThreadSafeModuleE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc31BasicIRLayerMaterializationUnit11materializeESt10unique_ptrINS0_29MaterializationResponsibilityESt14default_deleteIS3_EE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc19MaterializationTask3runEv at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm6detail18UniqueFunctionBaseIvJSt10unique_ptrINS_3orc4TaskESt14default_deleteIS4_EEEE8CallImplIPFvS7_EEEvPvRS7_ at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16ExecutionSession22dispatchOutstandingMUsEv at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16ExecutionSession17OL_completeLookupESt10unique_ptrINS0_21InProgressLookupStateESt14default_deleteIS3_EESt10shared_ptrINS0_23AsynchronousSymbolQueryEESt8functionIFvRKNS_8DenseMapIPNS0_8JITDylibENS_8DenseSetINS0_15SymbolStringPtrENS_12DenseMapInfoISF_vEEEENSG_ISD_vEENS_6detail12DenseMapPairISD_SI_EEEEEE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc25InProgressFullLookupState8completeESt10unique_ptrINS0_21InProgressLookupStateESt14default_deleteIS3_EE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16ExecutionSession19OL_applyQueryPhase1ESt10unique_ptrINS0_21InProgressLookupStateESt14default_deleteIS3_EENS_5ErrorE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16ExecutionSession6lookupENS0_10LookupKindERKSt6vectorISt4pairIPNS0_8JITDylibENS0_19JITDylibLookupFlagsEESaIS8_EENS0_15SymbolLookupSetENS0_11SymbolStateENS_15unique_functionIFvNS_8ExpectedINS_8DenseMapINS0_15SymbolStringPtrENS_18JITEvaluatedSymbolENS_12DenseMapInfoISI_vEENS_6detail12DenseMapPairISI_SJ_EEEEEEEEESt8functionIFvRKNSH_IS6_NS_8DenseSetISI_SL_EENSK_IS6_vEENSN_IS6_SV_EEEEEE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16ExecutionSession6lookupERKSt6vectorISt4pairIPNS0_8JITDylibENS0_19JITDylibLookupFlagsEESaIS7_EENS0_15SymbolLookupSetENS0_10LookupKindENS0_11SymbolStateESt8functionIFvRKNS_8DenseMapIS5_NS_8DenseSetINS0_15SymbolStringPtrENS_12DenseMapInfoISI_vEEEENSJ_IS5_vEENS_6detail12DenseMapPairIS5_SL_EEEEEE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) addModule at /source/src/jitlayers.cpp:1875 jl_add_to_ee at /source/src/jitlayers.cpp:2306 jl_add_to_ee at /source/src/jitlayers.cpp:2285 _jl_compile_codeinst at /source/src/jitlayers.cpp:277 jl_generate_fptr_impl at /source/src/jitlayers.cpp:536 jl_compile_method_internal at /source/src/gf.c:2536 [inlined] jl_compile_method_internal at /source/src/gf.c:2423 _jl_invoke at /source/src/gf.c:2940 [inlined] ijl_apply_generic at /source/src/gf.c:3125 time_step_tke_mass_flux_model at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:21 unknown function (ip: 0x72c2d05ed4c6) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 macro expansion at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.11/Test/src/Test.jl:677 [inlined] macro expansion at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] top-level scope at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:61 _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_invoke at /source/src/gf.c:2955 jl_toplevel_eval_flex at /source/src/toplevel.c:934 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 [inlined] include_string at ./loading.jl:2734 _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 _include at ./loading.jl:2794 include at ./sysimg.jl:38 unknown function (ip: 0x72c2f7500082) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_stmt_value at /source/src/interpreter.c:174 [inlined] eval_body at /source/src/interpreter.c:670 jl_interpret_toplevel_thunk at /source/src/interpreter.c:824 jl_toplevel_eval_flex at /source/src/toplevel.c:943 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 [inlined] include_string at ./loading.jl:2734 _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 _include at ./loading.jl:2794 include at ./sysimg.jl:38 unknown function (ip: 0x72c2f7500082) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_stmt_value at /source/src/interpreter.c:174 [inlined] eval_body at /source/src/interpreter.c:670 jl_interpret_toplevel_thunk at /source/src/interpreter.c:824 jl_toplevel_eval_flex at /source/src/toplevel.c:943 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 [inlined] exec_options at ./client.jl:296 _start at ./client.jl:531 jfptr__start_73694.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] true_main at /source/src/jlapi.c:900 jl_repl_entrypoint at /source/src/jlapi.c:1059 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x72c2f88b2249) __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) unknown function (ip: (nil)) ============================================================== Profile collected. A report will print at the next yield point ============================================================== TKEMassFlux: Error During Test┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.11/Profile/src/Profile.jl:1240 at Overhead ╎ [+additional indent] Count File:Line; Function ========================================================= Thread 1 Task 0x000072c2eb200010 Total snapshots: 2. Utilization: 100% ╎2 @Base/client.jl:531; _start() ╎ 2 @Base/client.jl:296; exec_options(opts::Base.JLOptions) ╎ 2 @Base/boot.jl:430; eval ╎ 2 @Base/sysimg.jl:38; include(fname::String) ╎ 2 @Base/loading.jl:2794; _include(mapexpr::Function, mod::Module, _path::… ╎ 2 @Base/loading.jl:2734; include_string(mapexpr::typeof(identity), mod::… ╎ ╎ 2 @Base/boot.jl:430; eval ╎ ╎ 2 @Base/sysimg.jl:38; include(fname::String) ╎ ╎ 2 @Base/loading.jl:2794; _include(mapexpr::Function, mod::Module, _pa… ╎ ╎ 2 @Base/loading.jl:2734; include_string(mapexpr::typeof(identity), m… ╎ ╎ 2 @Base/boot.jl:430; eval ╎ ╎ ╎ 2 …/test_tkemassflux.jl:61; top-level scope ╎ ╎ ╎ 2 @Test/src/Test.jl:1709; macro expansion ╎ ╎ ╎ 2 …test_tkemassflux.jl:74; macro expansion ╎ ╎ ╎ 2 @Test/src/Test.jl:677; macro expansion ╎ ╎ ╎ 2 …est_tkemassflux.jl:74; macro expansion 1╎ ╎ ╎ ╎ 2 …est_tkemassflux.jl:21; time_step_tke_mass_flux_model(bound… /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 Test threw exception Expression: time_step_tke_mass_flux_model(boundary_layer_depth, mixing_length, nonlocal_flux, tke_equation, wall_model, eddy_diffusivity_model) BoundsError: attempt to access 6-element OffsetArray(::Vector{Float64}, 0:5) with eltype Float64 with indices 0:5 at index [6] Stacktrace: [1] throw_boundserror(A::OffsetArrays.OffsetVector{Float64, Vector{Float64}}, I::Tuple{Int64}) @ Base ./essentials.jl:14 [2] checkbounds @ ./abstractarray.jl:699 [inlined] [3] getindex @ ~/.julia/packages/OffsetArrays/b7qpm/src/OffsetArrays.jl:434 [inlined] [4] ∂z @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:361 [inlined] [5] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/KPP.jl:159 [inlined] [6] ∂B∂z @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/TKEMassFlux.jl:29 [inlined] [7] Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:111 [inlined] [8] oncell @ ~/.julia/packages/OceanTurb/wYitF/src/fields.jl:461 [inlined] [9] cell_Richardson_number @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:115 [inlined] [10] Cᴷu @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:121 [inlined] [11] KU @ ~/.julia/packages/OceanTurb/wYitF/src/models/TKEMassFlux/diffusivities.jl:5 [inlined] [12] #43 @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:157 [inlined] [13] macro expansion @ ./ntuple.jl:72 [inlined] [14] ntuple @ ./ntuple.jl:69 [inlined] [15] update!(solution::OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, m::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedSurfaceTKEValue{Float64}, Nothing, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.ROMSMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, eqn::Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, bcs::@NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:151 [16] update! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:162 [inlined] [17] time_step! @ ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:269 [inlined] [18] time_step!(model::OceanTurb.TKEMassFlux.Model{OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}, Nothing, OceanTurb.TKEMassFlux.PrescribedSurfaceTKEValue{Float64}, Nothing, OceanTurb.TKEMassFlux.TKEParameters{Float64}, OceanTurb.ModularKPP.ROMSMixingDepth{Float64}, OceanTurb.TKEMassFlux.BackgroundDiffusivities{Float64}, Constants{Float64}, OceanTurb.TKEMassFlux.State{Float64, CellField{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, Nothing, Float64, Nothing}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, BackwardEulerTimestepper{Equation{NTuple{5, typeof(OceanTurb.minuszero)}, @NamedTuple{U::typeof(OceanTurb.minuszero), V::typeof(OceanTurb.minuszero), T::typeof(OceanTurb.minuszero), S::typeof(OceanTurb.minuszero), e::typeof(OceanTurb.TKEMassFlux.Le)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.KU), V::typeof(OceanTurb.TKEMassFlux.KV), T::typeof(OceanTurb.TKEMassFlux.KT), S::typeof(OceanTurb.TKEMassFlux.KS), e::typeof(OceanTurb.TKEMassFlux.Ke)}, @NamedTuple{U::typeof(OceanTurb.TKEMassFlux.RU), V::typeof(OceanTurb.TKEMassFlux.RV), T::typeof(OceanTurb.TKEMassFlux.RT), S::typeof(OceanTurb.TKEMassFlux.RS), e::typeof(OceanTurb.TKEMassFlux.Re)}, typeof(OceanTurb.TKEMassFlux.update_state!)}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, NTuple{5, Tridiagonal{Float64, Vector{Float64}}}}, OceanTurb.TKEMassFlux.Solution{Vector{Float64}, UniformGrid{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, Float64}, @NamedTuple{U::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, V::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, T::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, S::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}, e::FieldBoundaryConditions{BoundaryCondition{Gradient, Float64}, BoundaryCondition{Flux, Float64}}}, Float64}, Δt::Float64, Nt::Int64) @ OceanTurb ~/.julia/packages/OceanTurb/wYitF/src/timesteppers.jl:18 [19] time_step_tke_mass_flux_model(boundary_layer_depth::OceanTurb.ModularKPP.ROMSMixingDepth{Float64}, mixing_length::OceanTurb.TKEMassFlux.EquilibriumMixingLength{Float64}, nonlocal_flux::Nothing, tke_equation::OceanTurb.TKEMassFlux.TKEParameters{Float64}, tke_wall_model::OceanTurb.TKEMassFlux.PrescribedSurfaceTKEValue{Float64}, eddy_diffusivities::OceanTurb.TKEMassFlux.RiDependentDiffusivities{Float64}) @ Main ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:21 [20] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [21] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:677 [inlined] [22] macro expansion @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:74 [inlined] [23] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [24] top-level scope @ ~/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:61 testing... OK ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:522 poptask at ./task.jl:1012 wait at ./task.jl:1021 #wait#733 at ./condition.jl:130 wait at ./condition.jl:125 [inlined] wait at ./process.jl:694 wait at ./process.jl:687 unknown function (ip: 0x798fd6d721e2) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 subprocess_handler at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2146 #131 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2086 withenv at ./env.jl:265 #118 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1935 with_temp_env at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1793 #116 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1902 #mktempdir#28 at ./file.jl:819 unknown function (ip: 0x798fd6d6bd8d) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 mktempdir at ./file.jl:815 mktempdir at ./file.jl:815 [inlined] #sandbox#115 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1849 [inlined] sandbox at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1841 unknown function (ip: 0x798fd6d605da) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 #test#128 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2067 test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2011 [inlined] #test#146 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:481 test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:460 unknown function (ip: 0x798fd6d602dd) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 #test#77 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:159 unknown function (ip: 0x798fd6d5fccd) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:148 #test#75 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:147 [inlined] test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:147 [inlined] #test#74 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:146 [inlined] test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:146 unknown function (ip: 0x798fd6d5c156) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_stmt_value at /source/src/interpreter.c:174 [inlined] eval_body at /source/src/interpreter.c:670 eval_body at /source/src/interpreter.c:539 eval_body at /source/src/interpreter.c:539 jl_interpret_toplevel_thunk at /source/src/interpreter.c:824 jl_toplevel_eval_flex at /source/src/toplevel.c:943 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 [inlined] include_string at ./loading.jl:2734 _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 _include at ./loading.jl:2794 include at ./Base.jl:562 jfptr_include_47034.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 exec_options at ./client.jl:323 _start at ./client.jl:531 jfptr__start_73694.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] true_main at /source/src/jlapi.c:900 jl_repl_entrypoint at /source/src/jlapi.c:1059 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x798fd8001249) __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) unknown function (ip: (nil)) ============================================================== Profile collected. A report will print at the next yield point ============================================================== testing... OK ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.11/Profile/src/Profile.jl:1240 Overhead ╎ [+additional indent] Count File:Line; Function ========================================================= Thread 1 Task 0x0000798fcaa00010 Total snapshots: 204. Utilization: 0% ╎204 @Base/client.jl:531; _start() ╎ 204 @Base/client.jl:323; exec_options(opts::Base.JLOptions) ╎ 204 @Base/Base.jl:562; include(mod::Module, _path::String) ╎ 204 @Base/loading.jl:2794; _include(mapexpr::Function, mod::Module, _pat… ╎ 204 @Base/loading.jl:2734; include_string(mapexpr::typeof(identity), mo… ╎ 204 @Base/boot.jl:430; eval ╎ ╎ 204 @Pkg/src/API.jl:146; kwcall(::@NamedTuple{julia_args::Cmd}, ::typ… ╎ ╎ 204 @Pkg/src/API.jl:146; #test#74 ╎ ╎ 204 @Pkg/src/API.jl:147; test ╎ ╎ 204 @Pkg/src/API.jl:147; #test#75 ╎ ╎ 204 @Pkg/src/API.jl:148; kwcall(::@NamedTuple{julia_args::Cmd}, :… ╎ ╎ ╎ 204 @Pkg/src/API.jl:159; test(pkgs::Vector{Pkg.Types.PackageSpec… ╎ ╎ ╎ 204 @Pkg/src/API.jl:460; kwcall(::@NamedTuple{julia_args::Cmd, … ╎ ╎ ╎ 204 @Pkg/src/API.jl:481; test(ctx::Pkg.Types.Context, pkgs::Ve… ╎ ╎ ╎ 204 …rc/Operations.jl:2011; test ╎ ╎ ╎ 204 …rc/Operations.jl:2067; test(ctx::Pkg.Types.Context, pkg… ╎ ╎ ╎ ╎ 204 …c/Operations.jl:1841; kwcall(::@NamedTuple{preferences… ╎ ╎ ╎ ╎ 204 …c/Operations.jl:1849; #sandbox#115 ╎ ╎ ╎ ╎ 204 @Base/file.jl:815; mktempdir ╎ ╎ ╎ ╎ 204 @Base/file.jl:815; mktempdir(fn::Function, parent::S… ╎ ╎ ╎ ╎ 204 @Base/file.jl:819; mktempdir(fn::Pkg.Operations.var… ╎ ╎ ╎ ╎ ╎ 204 …Operations.jl:1902; (::Pkg.Operations.var"#116#12… ╎ ╎ ╎ ╎ ╎ 204 …Operations.jl:1793; with_temp_env(fn::Pkg.Operat… ╎ ╎ ╎ ╎ ╎ 204 …Operations.jl:1935; (::Pkg.Operations.var"#118#… ╎ ╎ ╎ ╎ ╎ 204 @Base/env.jl:265; withenv(::Pkg.Operations.var"… ╎ ╎ ╎ ╎ ╎ 204 …perations.jl:2086; (::Pkg.Operations.var"#131… ╎ ╎ ╎ ╎ ╎ ╎ 204 …erations.jl:2146; subprocess_handler(cmd::Cm… ╎ ╎ ╎ ╎ ╎ ╎ 204 …/process.jl:687; wait(x::Base.Process) ╎ ╎ ╎ ╎ ╎ ╎ 204 …/process.jl:694; wait(x::Base.Process, syn… ╎ ╎ ╎ ╎ ╎ ╎ 204 …ondition.jl:125; wait ╎ ╎ ╎ ╎ ╎ ╎ 204 …ondition.jl:130; wait(c::Base.GenericCon… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 204 …ase/task.jl:1021; wait() 203╎ ╎ ╎ ╎ ╎ ╎ ╎ 204 …ase/task.jl:1012; poptask(W::Base.Intr… [285] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/OceanTurb/wYitF/test/test_tkemassflux.jl:60 _ZN4llvm8visitAllIZNS_16SCEVExprContainsIZNKS_15ScalarEvolution13checkValidityEPKNS_4SCEVEEUlS5_E_EEbS5_T_E11FindClosureEEvS5_RS7_.constprop.0 at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm15ScalarEvolution15getExistingSCEVEPNS_5ValueE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm15ScalarEvolution7getSCEVEPNS_5ValueE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm15ScalarEvolution13isImpliedCondENS_7CmpInst9PredicateEPKNS_4SCEVES5_PKNS_5ValueEbPKNS_11InstructionE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm15ScalarEvolution27isLoopBackedgeGuardedByCondEPKNS_4LoopENS_7CmpInst9PredicateEPKNS_4SCEVES8_ at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm15ScalarEvolution29proveNoSignedWrapViaInductionEPKNS_14SCEVAddRecExprE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm15ScalarEvolution21getSignExtendExprImplEPKNS_4SCEVEPNS_4TypeEj at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm15ScalarEvolution17getSignExtendExprEPKNS_4SCEVEPNS_4TypeEj at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm15ScalarEvolution15willNotOverflowENS_11Instruction9BinaryOpsEbPKNS_4SCEVES5_PKS1_ at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm15ScalarEvolution35getStrengthenedNoWrapFlagsFromBinOpEPKNS_25OverflowingBinaryOperatorE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN12_GLOBAL__N_114SimplifyIndvar13simplifyUsersEPN4llvm7PHINodeEPNS1_9IVVisitorE.constprop.0 at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm17simplifyUsersOfIVEPNS_7PHINodeEPNS_15ScalarEvolutionEPNS_13DominatorTreeEPNS_8LoopInfoEPKNS_19TargetTransformInfoERNS_15SmallVectorImplINS_14WeakTrackingVHEEERNS_12SCEVExpanderEPNS_9IVVisitorE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) PkgEval terminated after 2729.33s: test duration exceeded the time limit