Package evaluation of ClimaCalibrate on Julia 1.11.5 (32ac370b68*) started at 2025-06-29T19:16:52.662 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 8.45s ################################################################################ # Installation # Installing ClimaCalibrate... Resolving package versions... Updating `~/.julia/environments/v1.11/Project.toml` [4347a170] + ClimaCalibrate v0.1.2 Updating `~/.julia/environments/v1.11/Manifest.toml` [47edcb42] + ADTypes v1.15.0 [14f7f29c] + AMD v0.5.3 [621f4979] + AbstractFFTs v1.5.0 [1520ce14] + AbstractTrees v0.4.5 [79e6a3ab] + Adapt v4.3.0 [66dad0bd] + AliasTables v1.1.3 [7d9fca2a] + Arpack v0.5.4 [4fba245c] + ArrayInterface v7.19.0 [13072b0f] + AxisAlgorithms v1.1.0 [6e4b80f9] + BenchmarkTools v1.6.0 [d360d2e6] + ChainRulesCore v1.25.2 [4347a170] + ClimaCalibrate v0.1.2 [523fee87] + CodecBzip2 v0.8.5 [944b1d66] + CodecZlib v0.7.8 [bbf7d656] + CommonSubexpressions v0.3.1 [34da2185] + Compat v4.16.0 [187b0558] + ConstructionBase v1.6.0 [f65535da] + Convex v0.16.4 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.18.22 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [a0c0ee7d] + DifferentiationInterface v0.7.1 [31c24e10] + Distributions v0.25.120 [ffbed154] + DocStringExtensions v0.9.5 ⌃ [aa8a2aa5] + EnsembleKalmanProcesses v2.0.1 [4e289a0a] + EnumX v1.0.5 [7a1cc6ca] + FFTW v1.9.0 [442a2c76] + FastGaussQuadrature v1.0.2 [5789e2e9] + FileIO v1.17.0 [1a297f60] + FillArrays v1.13.0 [6a86dc24] + FiniteDiff v2.27.0 [f6369f11] + ForwardDiff v1.0.1 [e4b2fa32] + GaussianRandomFields v2.2.6 [076d061b] + HashArrayMappedTries v0.2.0 [34004b35] + HypergeometricFunctions v0.3.28 ⌅ [a98d9a8b] + Interpolations v0.15.1 [92d709cd] + IrrationalConstants v0.2.4 [033835bb] + JLD2 v0.5.15 [692b3bcd] + JLLWrappers v1.7.0 [682c06a0] + JSON v0.21.4 [0f8b85d8] + JSON3 v1.14.3 [40e66cde] + LDLFactorizations v0.10.1 [d3d80556] + LineSearches v7.4.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [1914dd2f] + MacroTools v0.5.16 [b8f27783] + MathOptInterface v1.41.0 [e1d29d7a] + Missings v1.2.0 [d8a4904e] + MutableArithmetics v1.6.4 [d41bc354] + NLSolversBase v7.10.0 [77ba4419] + NaNMath v1.1.3 [6fe1bfb0] + OffsetArrays v1.17.0 [429524aa] + Optim v1.13.2 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.35 [d96e819e] + Parameters v0.12.3 [69de0a69] + Parsers v2.8.3 [85a6dd25] + PositiveFactorizations v0.2.4 ⌅ [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.4.3 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [c84ed2f1] + Ratios v0.4.5 [3cdcf5f2] + RecipesBase v1.3.4 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.8.0 [c946c3f1] + SCS v2.1.0 [7e506255] + ScopedValues v1.3.0 [efcf1570] + Setfield v1.1.2 [a2af1166] + SortingAlgorithms v1.2.1 [276daf66] + SpecialFunctions v2.5.1 [90137ffa] + StaticArrays v1.9.13 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 [2913bbd2] + StatsBase v0.34.5 [4c63d2b9] + StatsFuns v1.5.0 [69024149] + StringEncodings v0.3.7 [856f2bd8] + StructTypes v1.11.0 [3bb67fe8] + TranscodingStreams v0.11.3 [3a884ed6] + UnPack v1.0.2 [efce3f68] + WoodburyMatrices v1.0.0 [ddb6d928] + YAML v0.4.14 ⌅ [68821587] + Arpack_jll v3.5.1+1 [6e34b625] + Bzip2_jll v1.0.9+0 [f5851436] + FFTW_jll v3.3.11+0 [1d5cc7b8] + IntelOpenMP_jll v2025.0.4+0 [1d63c593] + LLVMOpenMP_jll v18.1.8+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [856f044c] + MKL_jll v2025.0.1+1 [656ef2d0] + OpenBLAS32_jll v0.3.29+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [f4f2fc5b] + SCS_jll v3.2.7+0 [1317d2d5] + oneTBB_jll v2022.0.0+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.6.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.11.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.2.0 [44cfe95a] + Pkg v1.11.0 [de0858da] + Printf v1.11.0 [9abbd945] + Profile v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] + LibCURL_jll v8.6.0+0 [e37daf67] + LibGit2_jll v1.7.2+0 [29816b5a] + LibSSH2_jll v1.11.0+1 [c8ffd9c3] + MbedTLS_jll v2.28.6+0 [14a3606d] + MozillaCACerts_jll v2023.12.12 [4536629a] + OpenBLAS_jll v0.3.27+1 [05823500] + OpenLibm_jll v0.8.5+0 [bea87d4a] + SuiteSparse_jll v7.7.0+0 [83775a58] + Zlib_jll v1.2.13+1 [8e850b90] + libblastrampoline_jll v5.11.0+0 [8e850ede] + nghttp2_jll v1.59.0+0 [3f19e933] + p7zip_jll v17.4.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Installation completed after 6.16s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... ┌ Warning: Could not use exact versions of packages in manifest, re-resolving └ @ TestEnv ~/.julia/packages/TestEnv/iS95e/src/julia-1.11/activate_set.jl:75 Precompiling package dependencies... Precompilation completed after 2269.59s ################################################################################ # Testing # Testing ClimaCalibrate ┌ Warning: Could not use exact versions of packages in manifest, re-resolving └ @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1924 Status `/tmp/jl_tQ9bSH/Project.toml` [4c88cf16] Aqua v0.8.13 [95e48a1f] CalibrateEmulateSample v0.7.0 [29b5916a] ClimaAnalysis v0.5.18 [4347a170] ClimaCalibrate v0.1.2 [5c42b081] ClimaParams v0.10.35 [8f4d0f93] Conda v1.10.2 [31c24e10] Distributions v0.25.120 ⌃ [aa8a2aa5] EnsembleKalmanProcesses v2.4.0 [033835bb] JLD2 v0.5.15 [b946abbf] NaNStatistics v0.6.53 [bac558e1] OrderedCollections v1.8.1 [1bc83da4] SafeTestsets v0.1.0 [10745b16] Statistics v1.11.1 [ddb6d928] YAML v0.4.14 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [37e2e46d] LinearAlgebra v1.11.0 [56ddb016] Logging v1.11.0 [9a3f8284] Random v1.11.0 [fa267f1f] TOML v1.0.3 [8dfed614] Test v1.11.0 Status `/tmp/jl_tQ9bSH/Manifest.toml` [47edcb42] ADTypes v1.15.0 [14f7f29c] AMD v0.5.3 [621f4979] AbstractFFTs v1.5.0 [99985d1d] AbstractGPs v0.5.24 ⌅ [80f14c24] AbstractMCMC v4.4.2 [1520ce14] AbstractTrees v0.4.5 [79e6a3ab] Adapt v4.3.0 ⌃ [5b7e9947] AdvancedMH v0.7.5 [66dad0bd] AliasTables v1.1.3 [4c88cf16] Aqua v0.8.13 [dce04be8] ArgCheck v2.5.0 [7d9fca2a] Arpack v0.5.4 [4fba245c] ArrayInterface v7.19.0 [13072b0f] AxisAlgorithms v1.1.0 [39de3d68] AxisArrays v0.4.7 ⌅ [198e06fe] BangBang v0.3.40 [9718e550] Baselet v0.1.1 [6e4b80f9] BenchmarkTools v1.6.0 [62783981] BitTwiddlingConvenienceFunctions v0.1.6 ⌅ [179af706] CFTime v0.1.4 [2a0fbf3d] CPUSummary v0.2.6 [95e48a1f] CalibrateEmulateSample v0.7.0 [d360d2e6] ChainRulesCore v1.25.2 [ae650224] ChunkSplitters v3.1.2 [29b5916a] ClimaAnalysis v0.5.18 [4347a170] ClimaCalibrate v0.1.2 [5c42b081] ClimaParams v0.10.35 [fb6a15b2] CloseOpenIntervals v0.1.13 [523fee87] CodecBzip2 v0.8.5 [944b1d66] CodecZlib v0.7.8 [1fbeeb36] CommonDataModel v0.3.8 [bbf7d656] CommonSubexpressions v0.3.1 [f70d9fcc] CommonWorldInvalidations v1.0.0 [34da2185] Compat v4.16.0 [a33af91c] CompositionsBase v0.1.2 [8f4d0f93] Conda v1.10.2 [88cd18e8] ConsoleProgressMonitor v0.1.2 [187b0558] ConstructionBase v1.6.0 [f65535da] Convex v0.16.4 [adafc99b] CpuId v0.3.1 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.7.0 [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [244e2a9f] DefineSingletons v0.1.2 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [a0c0ee7d] DifferentiationInterface v0.7.1 [3c3547ce] DiskArrays v0.4.13 [b4f34e82] Distances v0.10.12 [31c24e10] Distributions v0.25.120 [ffbed154] DocStringExtensions v0.9.5 [fdbdab4c] ElasticArrays v1.2.12 [2904ab23] ElasticPDMats v0.2.3 ⌃ [aa8a2aa5] EnsembleKalmanProcesses v2.4.0 [4e289a0a] EnumX v1.0.5 [c87230d0] FFMPEG v0.4.2 [7a1cc6ca] FFTW v1.9.0 ⌅ [442a2c76] FastGaussQuadrature v0.4.9 [5789e2e9] FileIO v1.17.0 [1a297f60] FillArrays v1.13.0 [6a86dc24] FiniteDiff v2.27.0 [59287772] Formatting v0.4.3 ⌅ [f6369f11] ForwardDiff v0.10.38 [069b7b12] FunctionWrappers v1.1.3 [d9f16b24] Functors v0.5.2 [891a1506] GaussianProcesses v0.12.5 ⌃ [e4b2fa32] GaussianRandomFields v2.1.6 [076d061b] HashArrayMappedTries v0.2.0 [3e5b6fbb] HostCPUFeatures v0.1.17 [615f187c] IfElse v0.1.1 [22cec73e] InitialValues v0.3.1 [842dd82b] InlineStrings v1.4.4 ⌅ [a98d9a8b] Interpolations v0.15.1 [8197267c] IntervalSets v0.7.11 [3587e190] InverseFunctions v0.1.17 [41ab1584] InvertedIndices v1.3.1 ⌅ [92d709cd] IrrationalConstants v0.1.1 [c8e1da08] IterTools v1.10.0 [82899510] IteratorInterfaceExtensions v1.0.0 [033835bb] JLD2 v0.5.15 [692b3bcd] JLLWrappers v1.7.0 [682c06a0] JSON v0.21.4 [0f8b85d8] JSON3 v1.14.3 [5ab0869b] KernelDensity v0.6.9 [ec8451be] KernelFunctions v0.10.65 [40e66cde] LDLFactorizations v0.10.1 [8ac3fa9e] LRUCache v1.6.2 [b964fa9f] LaTeXStrings v1.4.0 [10f19ff3] LayoutPointers v0.1.17 [1d6d02ad] LeftChildRightSiblingTrees v0.2.0 [d3d80556] LineSearches v7.4.0 [6fdf6af0] LogDensityProblems v2.1.2 [2ab3a3ac] LogExpFunctions v0.3.29 [e6f89c97] LoggingExtras v1.1.0 [bdcacae8] LoopVectorization v0.12.172 ⌅ [c7f686f2] MCMCChains v5.7.1 ⌅ [be115224] MCMCDiagnosticTools v0.2.1 [e80e1ace] MLJModelInterface v1.11.1 [3da0fdf6] MPIPreferences v0.1.11 [1914dd2f] MacroTools v0.5.16 [d125e4d3] ManualMemory v0.1.8 [b8f27783] MathOptInterface v1.41.0 ⌅ [128add7d] MicroCollections v0.1.4 [e1d29d7a] Missings v1.2.0 [d8a4904e] MutableArithmetics v1.6.4 [85f8d34a] NCDatasets v0.14.8 [d41bc354] NLSolversBase v7.10.0 [77ba4419] NaNMath v1.1.3 [b946abbf] NaNStatistics v0.6.53 [c020b1a1] NaturalSort v1.0.0 [6fe1bfb0] OffsetArrays v1.17.0 [429524aa] Optim v1.13.2 [bac558e1] OrderedCollections v1.8.1 [90014a1f] PDMats v0.11.35 [d96e819e] Parameters v0.12.3 [69de0a69] Parsers v2.8.3 [1d0040c9] PolyesterWeave v0.2.2 [2dfb63ee] PooledArrays v1.4.3 [85a6dd25] PositiveFactorizations v0.2.4 ⌅ [aea7be01] PrecompileTools v1.2.1 [21216c6a] Preferences v1.4.3 [08abe8d2] PrettyTables v2.4.0 [49802e3a] ProgressBars v1.5.1 [33c8b6b6] ProgressLogging v0.1.5 [92933f4c] ProgressMeter v1.10.4 [43287f4e] PtrArrays v1.3.0 [438e738f] PyCall v1.96.4 [1fd47b50] QuadGK v2.11.2 [36c3bae2] RandomFeatures v0.3.4 [b3c3ace0] RangeArrays v0.3.2 [c84ed2f1] Ratios v0.4.5 [3cdcf5f2] RecipesBase v1.3.4 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [37e2e3b7] ReverseDiff v1.16.1 ⌅ [79098fc4] Rmath v0.7.1 [c946c3f1] SCS v2.1.0 [94e857df] SIMDTypes v0.1.0 [476501e8] SLEEFPirates v0.6.43 [1bc83da4] SafeTestsets v0.1.0 [30f210dd] ScientificTypesBase v3.0.0 [3646fa90] ScikitLearn v0.7.0 [6e75b9c4] ScikitLearnBase v0.5.0 [7e506255] ScopedValues v1.3.0 [91c51154] SentinelArrays v1.4.8 [efcf1570] Setfield v1.1.2 [a2af1166] SortingAlgorithms v1.2.1 [276daf66] SpecialFunctions v2.5.1 [171d559e] SplittablesBase v0.1.15 [860ef19b] StableRNGs v1.0.3 [aedffcd0] Static v1.2.0 [0d7ed370] StaticArrayInterface v1.8.0 [90137ffa] StaticArrays v1.9.13 [1e83bf80] StaticArraysCore v1.4.3 [64bff920] StatisticalTraits v3.4.0 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.1 ⌅ [2913bbd2] StatsBase v0.33.21 ⌅ [4c63d2b9] StatsFuns v0.9.18 [69024149] StringEncodings v0.3.7 [892a3eda] StringManipulation v0.4.1 [856f2bd8] StructTypes v1.11.0 [9449cd9e] TSVD v0.4.4 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [62fd8b95] TensorCore v0.1.1 [5d786b92] TerminalLoggers v0.1.7 [8290d209] ThreadingUtilities v0.5.5 [3bb67fe8] TranscodingStreams v0.11.3 ⌃ [28d57a85] Transducers v0.4.80 [bc48ee85] Tullio v0.3.8 [3a884ed6] UnPack v1.0.2 [1986cc42] Unitful v1.23.1 [3d5dd08c] VectorizationBase v0.21.71 [81def892] VersionParsing v1.3.0 [efce3f68] WoodburyMatrices v1.0.0 [ddb6d928] YAML v0.4.14 [700de1a5] ZygoteRules v0.2.7 ⌅ [68821587] Arpack_jll v3.5.1+1 [0b7ba130] Blosc_jll v1.21.7+0 [6e34b625] Bzip2_jll v1.0.9+0 [83423d85] Cairo_jll v1.18.5+0 [2e619515] Expat_jll v2.6.5+0 ⌅ [b22a6f82] FFMPEG_jll v4.4.4+1 [f5851436] FFTW_jll v3.3.11+0 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[efcefdf7] PCRE2_jll v10.42.0+1 [bea87d4a] SuiteSparse_jll v7.7.0+0 [83775a58] Zlib_jll v1.2.13+1 [8e850b90] libblastrampoline_jll v5.11.0+0 [8e850ede] nghttp2_jll v1.59.0+0 [3f19e933] p7zip_jll v17.4.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... ┌ Warning: For 2 parameters, the recommended minimum ensemble size (`N_ens`) is 20. Got `N_ens` = 10`. └ @ EnsembleKalmanProcesses ~/.julia/packages/EnsembleKalmanProcesses/trJai/src/EnsembleKalmanProcess.jl:251 ┌ Warning: For 2 parameters, the recommended minimum ensemble size (`N_ens`) is 20. Got `N_ens` = 10`. └ @ EnsembleKalmanProcesses ~/.julia/packages/EnsembleKalmanProcesses/trJai/src/EnsembleKalmanProcess.jl:251 ┌ Warning: Attempting to store EnsembleKalmanProcesses.var"#failsafe_update#156". │ JLD2 only stores functions by name. │ This may not be useful for anonymous functions. └ @ JLD2 ~/.julia/packages/JLD2/SgtOb/src/data/writing_datatypes.jl:447 ┌ Warning: Attempting to store EnsembleKalmanProcesses.Localizers.var"#13#14"{EnsembleKalmanProcesses.Localizers.SECNice{Float64}}. │ JLD2 only stores functions by name. │ This may not be useful for anonymous functions. └ @ JLD2 ~/.julia/packages/JLD2/SgtOb/src/data/writing_datatypes.jl:447 ┌ Warning: Attempting to store EnsembleKalmanProcesses.ParameterDistributions.var"#23#26"{Int64, Int64}. │ JLD2 only stores functions by name. │ This may not be useful for anonymous functions. └ @ JLD2 ~/.julia/packages/JLD2/SgtOb/src/data/writing_datatypes.jl:447 ┌ Warning: Attempting to store EnsembleKalmanProcesses.ParameterDistributions.var"#24#27"{Int64, Int64}. │ JLD2 only stores functions by name. │ This may not be useful for anonymous functions. └ @ JLD2 ~/.julia/packages/JLD2/SgtOb/src/data/writing_datatypes.jl:447 ┌ Warning: Attempting to store EnsembleKalmanProcesses.ParameterDistributions.var"#25#28"{Int64, Int64}. │ JLD2 only stores functions by name. │ This may not be useful for anonymous functions. └ @ JLD2 ~/.julia/packages/JLD2/SgtOb/src/data/writing_datatypes.jl:447 ┌ Warning: For 2 parameters, the recommended minimum ensemble size (`N_ens`) is 20. Got `N_ens` = 10`. └ @ EnsembleKalmanProcesses ~/.julia/packages/EnsembleKalmanProcesses/trJai/src/EnsembleKalmanProcess.jl:251 ┌ Warning: Attempting to store EnsembleKalmanProcesses.var"#failsafe_update#156". │ JLD2 only stores functions by name. │ This may not be useful for anonymous functions. └ @ JLD2 ~/.julia/packages/JLD2/SgtOb/src/data/writing_datatypes.jl:447 ┌ Warning: Attempting to store EnsembleKalmanProcesses.Localizers.var"#13#14"{EnsembleKalmanProcesses.Localizers.SECNice{Float64}}. │ JLD2 only stores functions by name. │ This may not be useful for anonymous functions. └ @ JLD2 ~/.julia/packages/JLD2/SgtOb/src/data/writing_datatypes.jl:447 ┌ Warning: Attempting to store EnsembleKalmanProcesses.ParameterDistributions.var"#23#26"{Int64, Int64}. │ JLD2 only stores functions by name. │ This may not be useful for anonymous functions. └ @ JLD2 ~/.julia/packages/JLD2/SgtOb/src/data/writing_datatypes.jl:447 ┌ Warning: Attempting to store EnsembleKalmanProcesses.ParameterDistributions.var"#24#27"{Int64, Int64}. │ JLD2 only stores functions by name. │ This may not be useful for anonymous functions. └ @ JLD2 ~/.julia/packages/JLD2/SgtOb/src/data/writing_datatypes.jl:447 ┌ Warning: Attempting to store EnsembleKalmanProcesses.ParameterDistributions.var"#25#28"{Int64, Int64}. │ JLD2 only stores functions by name. │ This may not be useful for anonymous functions. └ @ JLD2 ~/.julia/packages/JLD2/SgtOb/src/data/writing_datatypes.jl:447 ┌ Warning: Recommended minimum ensemble size (`N_ens`) is 10. Got `N_ens` = 5. └ @ EnsembleKalmanProcesses ~/.julia/packages/EnsembleKalmanProcesses/trJai/src/EnsembleKalmanProcess.jl:249 ┌ Warning: Attempting to store EnsembleKalmanProcesses.var"#failsafe_update#156". │ JLD2 only stores functions by name. │ This may not be useful for anonymous functions. └ @ JLD2 ~/.julia/packages/JLD2/SgtOb/src/data/writing_datatypes.jl:447 ┌ Warning: Attempting to store EnsembleKalmanProcesses.Localizers.var"#13#14"{EnsembleKalmanProcesses.Localizers.SECNice{Float64}}. │ JLD2 only stores functions by name. │ This may not be useful for anonymous functions. └ @ JLD2 ~/.julia/packages/JLD2/SgtOb/src/data/writing_datatypes.jl:447 ┌ Warning: Attempting to store EnsembleKalmanProcesses.ParameterDistributions.var"#23#26"{Int64, Int64}. │ JLD2 only stores functions by name. │ This may not be useful for anonymous functions. └ @ JLD2 ~/.julia/packages/JLD2/SgtOb/src/data/writing_datatypes.jl:447 ┌ Warning: Attempting to store EnsembleKalmanProcesses.ParameterDistributions.var"#24#27"{Int64, Int64}. │ JLD2 only stores functions by name. │ This may not be useful for anonymous functions. └ @ JLD2 ~/.julia/packages/JLD2/SgtOb/src/data/writing_datatypes.jl:447 ┌ Warning: Attempting to store EnsembleKalmanProcesses.ParameterDistributions.var"#25#28"{Int64, Int64}. │ JLD2 only stores functions by name. │ This may not be useful for anonymous functions. └ @ JLD2 ~/.julia/packages/JLD2/SgtOb/src/data/writing_datatypes.jl:447 ┌ Warning: Number of samples 7 not divisible by batch size 2. The last 1 samples will be dropped. └ @ ClimaCalibrate ~/.julia/packages/ClimaCalibrate/BSy2J/src/ekp_interface.jl:388 ┌ Warning: Number of samples 3 not divisible by batch size 5. The last 3 samples will be dropped. └ @ ClimaCalibrate ~/.julia/packages/ClimaCalibrate/BSy2J/src/ekp_interface.jl:388 ┌ Warning: Number of samples 6 not divisible by batch size 7. The last 6 samples will be dropped. └ @ ClimaCalibrate ~/.julia/packages/ClimaCalibrate/BSy2J/src/ekp_interface.jl:388 Test Summary: | Pass Total Time EKP interface | 59 59 2m44.7s ┌ Error: Exception while generating log record in module ClimaCalibrate at /home/pkgeval/.julia/packages/ClimaCalibrate/BSy2J/src/model_interface.jl:40 │ exception = │ MethodError: no method matching get_ϕ_mean_final(::Int64, ::Int64) │ The function `get_ϕ_mean_final` exists, but no method is defined for this combination of argument types. │ │ Closest candidates are: │ get_ϕ_mean_final(!Matched::EnsembleKalmanProcesses.ParameterDistributions.ParameterDistribution, !Matched::EnsembleKalmanProcesses.EnsembleKalmanProcess) │ @ EnsembleKalmanProcesses ~/.julia/packages/EnsembleKalmanProcesses/trJai/src/EnsembleKalmanProcess.jl:567 │ │ Stacktrace: │ [1] macro expansion │ @ ./logging/logging.jl:385 [inlined] │ [2] analyze_iteration(ekp::Int64, g_ensemble::Int64, prior::Int64, output_dir::Int64, iteration::Int64) │ @ ClimaCalibrate ~/.julia/packages/ClimaCalibrate/BSy2J/src/model_interface.jl:40 │ [3] macro expansion │ @ ~/.julia/packages/ClimaCalibrate/BSy2J/test/model_interface.jl:19 [inlined] │ [4] macro expansion │ @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:677 [inlined] │ [5] macro expansion │ @ ~/.julia/packages/ClimaCalibrate/BSy2J/test/model_interface.jl:19 [inlined] │ [6] macro expansion │ @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] │ [7] top-level scope │ @ ~/.julia/packages/ClimaCalibrate/BSy2J/test/model_interface.jl:12 │ [8] include(mod::Module, _path::String) │ @ Base ./Base.jl:562 │ [9] include(x::String) │ @ Main.var"##Model interface#232" ~/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:28 │ [10] macro expansion │ @ ~/.julia/packages/ClimaCalibrate/BSy2J/test/runtests.jl:6 [inlined] │ [11] macro expansion │ @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] │ [12] macro expansion │ @ ~/.julia/packages/ClimaCalibrate/BSy2J/test/runtests.jl:6 [inlined] │ [13] top-level scope │ @ ~/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:30 │ [14] eval(m::Module, e::Any) │ @ Core ./boot.jl:430 │ [15] top-level scope │ @ ~/.julia/packages/ClimaCalibrate/BSy2J/test/runtests.jl:28 │ [16] include(fname::String) │ @ Main ./sysimg.jl:38 │ [17] top-level scope │ @ none:6 │ [18] eval │ @ ./boot.jl:430 [inlined] │ [19] exec_options(opts::Base.JLOptions) │ @ Base ./client.jl:296 │ [20] _start() │ @ Base ./client.jl:531 └ @ ClimaCalibrate ~/.julia/packages/ClimaCalibrate/BSy2J/src/model_interface.jl:40 ┌ Error: Exception while generating log record in module ClimaCalibrate at /home/pkgeval/.julia/packages/ClimaCalibrate/BSy2J/src/model_interface.jl:41 │ exception = │ MethodError: no method matching get_error(::Int64) │ The function `get_error` exists, but no method is defined for this combination of argument types. │ │ Closest candidates are: │ get_error(!Matched::EnsembleKalmanProcesses.EnsembleKalmanProcess) │ @ EnsembleKalmanProcesses ~/.julia/packages/EnsembleKalmanProcesses/trJai/src/EnsembleKalmanProcess.jl:851 │ │ Stacktrace: │ [1] macro expansion │ @ ./logging/logging.jl:385 [inlined] │ [2] analyze_iteration(ekp::Int64, g_ensemble::Int64, prior::Int64, output_dir::Int64, iteration::Int64) │ @ ClimaCalibrate ~/.julia/packages/ClimaCalibrate/BSy2J/src/model_interface.jl:41 │ [3] macro expansion │ @ ~/.julia/packages/ClimaCalibrate/BSy2J/test/model_interface.jl:19 [inlined] │ [4] macro expansion │ @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:677 [inlined] │ [5] macro expansion │ @ ~/.julia/packages/ClimaCalibrate/BSy2J/test/model_interface.jl:19 [inlined] │ [6] macro expansion │ @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] │ [7] top-level scope │ @ ~/.julia/packages/ClimaCalibrate/BSy2J/test/model_interface.jl:12 │ [8] include(mod::Module, _path::String) │ @ Base ./Base.jl:562 │ [9] include(x::String) │ @ Main.var"##Model interface#232" ~/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:28 │ [10] macro expansion │ @ ~/.julia/packages/ClimaCalibrate/BSy2J/test/runtests.jl:6 [inlined] │ [11] macro expansion │ @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] │ [12] macro expansion │ @ ~/.julia/packages/ClimaCalibrate/BSy2J/test/runtests.jl:6 [inlined] │ [13] top-level scope │ @ ~/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:30 │ [14] eval(m::Module, e::Any) │ @ Core ./boot.jl:430 │ [15] top-level scope │ @ ~/.julia/packages/ClimaCalibrate/BSy2J/test/runtests.jl:28 │ [16] include(fname::String) │ @ Main ./sysimg.jl:38 │ [17] top-level scope │ @ none:6 │ [18] eval │ @ ./boot.jl:430 [inlined] │ [19] exec_options(opts::Base.JLOptions) │ @ Base ./client.jl:296 │ [20] _start() │ @ Base ./client.jl:531 └ @ ClimaCalibrate ~/.julia/packages/ClimaCalibrate/BSy2J/src/model_interface.jl:41 Test Summary: | Pass Total Time Model interface | 4 4 8.3s Precompiling CalibrateEmulateSample... 2090.5 ms ✓ BangBang 8745.2 ms ✓ KernelFunctions 12905.8 ms ✓ ScikitLearn 1038.0 ms ✓ Tullio → TullioChainRulesCoreExt 6458.6 ms ✓ KernelDensity 6495.9 ms ✓ MCMCDiagnosticTools 30271.1 ms ✓ ReverseDiff 2581.4 ms ✓ LoopVectorization → SpecialFunctionsExt 3432.3 ms ✓ LoopVectorization → ForwardDiffExt 8536.6 ms ✓ GaussianProcesses 1361.1 ms ✓ BangBang → BangBangStaticArraysExt ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1009 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:522 poptask at ./task.jl:1012 wait at ./task.jl:1021 #wait#733 at ./condition.jl:130 wait at ./condition.jl:125 [inlined] _trywait at ./asyncevent.jl:145 #818 at ./asyncevent.jl:311 jfptr_YY.818_67293.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] start_task at /source/src/task.c:1202 unknown function (ip: (nil)) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.11/Profile/src/Profile.jl:1240 Overhead ╎ [+additional indent] Count File:Line; Function ========================================================= Thread 1 Task 0x000078c0e15a8fb0 Total snapshots: 580. Utilization: 0% ╎580 @Base/asyncevent.jl:311; (::Base.var"#818#819"{FileWatching.Pidfile.var… ╎ 580 @Base/asyncevent.jl:145; _trywait(t::Timer) ╎ 580 @Base/condition.jl:125; wait ╎ 580 @Base/condition.jl:130; wait(c::Base.GenericCondition{Base.Threads.S… ╎ 580 @Base/task.jl:1021; wait() 579╎ 580 @Base/task.jl:1012; poptask(W::Base.IntrusiveLinkedListSynchronize… 92390.0 ms ✓ BangBang → BangBangDataFramesExt 1071.5 ms ✓ BangBang → BangBangChainRulesCoreExt 1492.4 ms ✓ MicroCollections ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:522 poptask at ./task.jl:1012 wait at ./task.jl:1021 #wait#733 at ./condition.jl:130 wait at ./condition.jl:125 [inlined] wait at ./process.jl:694 wait at ./process.jl:687 unknown function (ip: 0x74d059b71872) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 subprocess_handler at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2146 #131 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2086 withenv at ./env.jl:265 #118 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1935 with_temp_env at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1793 #116 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1902 #mktempdir#28 at ./file.jl:819 unknown function (ip: 0x74d059b5c5fd) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 mktempdir at ./file.jl:815 mktempdir at ./file.jl:815 [inlined] #sandbox#115 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1849 [inlined] sandbox at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1841 unknown function (ip: 0x74d059b50b7a) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 #test#128 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2067 test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2011 [inlined] #test#146 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:481 test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:460 unknown function (ip: 0x74d059b5087d) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 #test#77 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:159 unknown function (ip: 0x74d059b5026d) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:148 #test#75 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:147 [inlined] test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:147 [inlined] #test#74 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:146 [inlined] test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:146 unknown function (ip: 0x74d059b4c6f6) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_stmt_value at /source/src/interpreter.c:174 [inlined] eval_body at /source/src/interpreter.c:670 eval_body at /source/src/interpreter.c:539 eval_body at /source/src/interpreter.c:539 jl_interpret_toplevel_thunk at /source/src/interpreter.c:824 jl_toplevel_eval_flex at /source/src/toplevel.c:943 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 [inlined] include_string at ./loading.jl:2734 _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 _include at ./loading.jl:2794 include at ./Base.jl:562 jfptr_include_47034.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 exec_options at ./client.jl:323 _start at ./client.jl:531 jfptr__start_73694.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] true_main at /source/src/jlapi.c:900 jl_repl_entrypoint at /source/src/jlapi.c:1059 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x74d05ae53249) __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) unknown function (ip: (nil)) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.11/Profile/src/Profile.jl:1240 Overhead ╎ [+additional indent] Count File:Line; Function ========================================================= Thread 1 Task 0x000074d04d800010 Total snapshots: 5. Utilization: 0% ╎5 @Base/client.jl:531; _start() ╎ 5 @Base/client.jl:323; exec_options(opts::Base.JLOptions) ╎ 5 @Base/Base.jl:562; include(mod::Module, _path::String) ╎ 5 @Base/loading.jl:2794; _include(mapexpr::Function, mod::Module, _path::S… ╎ 5 @Base/loading.jl:2734; include_string(mapexpr::typeof(identity), mod::M… ╎ 5 @Base/boot.jl:430; eval ╎ ╎ 5 @Pkg/src/API.jl:146; kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(… ╎ ╎ 5 @Pkg/src/API.jl:146; #test#74 ╎ ╎ 5 @Pkg/src/API.jl:147; test ╎ ╎ 5 @Pkg/src/API.jl:147; #test#75 ╎ ╎ 5 @Pkg/src/API.jl:148; kwcall(::@NamedTuple{julia_args::Cmd}, ::typ… ╎ ╎ ╎ 5 @Pkg/src/API.jl:159; test(pkgs::Vector{Pkg.Types.PackageSpec}; i… ╎ ╎ ╎ 5 @Pkg/src/API.jl:460; kwcall(::@NamedTuple{julia_args::Cmd, io::… ╎ ╎ ╎ 5 @Pkg/src/API.jl:481; test(ctx::Pkg.Types.Context, pkgs::Vector… ╎ ╎ ╎ 5 …/src/Operations.jl:2011; test ╎ ╎ ╎ 5 …src/Operations.jl:2067; test(ctx::Pkg.Types.Context, pkgs::… ╎ ╎ ╎ ╎ 5 …src/Operations.jl:1841; kwcall(::@NamedTuple{preferences::… ╎ ╎ ╎ ╎ 5 …src/Operations.jl:1849; #sandbox#115 ╎ ╎ ╎ ╎ 5 @Base/file.jl:815; mktempdir ╎ ╎ ╎ ╎ 5 @Base/file.jl:815; mktempdir(fn::Function, parent::Strin… ╎ ╎ ╎ ╎ 5 @Base/file.jl:819; mktempdir(fn::Pkg.Operations.var"#11… ╎ ╎ ╎ ╎ ╎ 5 …c/Operations.jl:1902; (::Pkg.Operations.var"#116#121"… ╎ ╎ ╎ ╎ ╎ 5 …c/Operations.jl:1793; with_temp_env(fn::Pkg.Operatio… ╎ ╎ ╎ ╎ ╎ 5 …/Operations.jl:1935; (::Pkg.Operations.var"#118#123… ╎ ╎ ╎ ╎ ╎ 5 @Base/env.jl:265; withenv(::Pkg.Operations.var"#131… ╎ ╎ ╎ ╎ ╎ 5 …Operations.jl:2086; (::Pkg.Operations.var"#131#13… ╎ ╎ ╎ ╎ ╎ ╎ 5 …Operations.jl:2146; subprocess_handler(cmd::Cmd,… ╎ ╎ ╎ ╎ ╎ ╎ 5 …se/process.jl:687; wait(x::Base.Process) ╎ ╎ ╎ ╎ ╎ ╎ 5 …se/process.jl:694; wait(x::Base.Process, syncd… ╎ ╎ ╎ ╎ ╎ ╎ 5 …condition.jl:125; wait ╎ ╎ ╎ ╎ ╎ ╎ 5 …condition.jl:130; wait(c::Base.GenericCondit… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 5 …ase/task.jl:1021; wait() 4╎ ╎ ╎ ╎ ╎ ╎ ╎ 5 …ase/task.jl:1012; poptask(W::Base.Intrusiv… 9642.7 ms ✓ AbstractGPs [1009] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/ClimaCalibrate/BSy2J/test/emulate_sample.jl:5 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:522 poptask at ./task.jl:1012 wait at ./task.jl:1021 #wait#733 at ./condition.jl:130 wait at ./condition.jl:125 [inlined] wait at ./process.jl:694 wait at ./process.jl:687 [inlined] success at ./process.jl:556 PkgEval terminated after 2741.86s: test duration exceeded the time limit