Package evaluation to test RemoteS on Julia 1.11.8 (29b3528cce*) started at 2026-01-20T13:03:10.656 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.11` Set-up completed after 8.24s ################################################################################ # Installation # Installing RemoteS... Resolving package versions... Installed GMT ─ v1.15.1 Updating `~/.julia/environments/v1.11/Project.toml` [26020ff4] + RemoteS v1.3.7 Updating `~/.julia/environments/v1.11/Manifest.toml` [1520ce14] + AbstractTrees v0.4.5 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [e2d170a0] + DataValueInterfaces v1.0.0 [7806a523] + DecisionTree v0.12.4 [8bb1440f] + DelimitedFiles v1.9.1 ⌃ [5752ebe1] + GMT v1.15.1 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 [b964fa9f] + LaTeXStrings v1.4.0 [3da0fdf6] + MPIPreferences v0.1.11 [bac558e1] + OrderedCollections v1.8.1 ⌅ [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.5.1 ⌅ [08abe8d2] + PrettyTables v2.4.0 [189a3867] + Reexport v1.2.2 [26020ff4] + RemoteS v1.3.7 [6e75b9c4] + ScikitLearnBase v0.5.0 [10745b16] + Statistics v1.11.1 [892a3eda] + StringManipulation v0.4.2 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [8ce61222] + Arrow_jll v19.0.1+0 [0b7ba130] + Blosc_jll v1.21.7+0 [6e34b625] + Bzip2_jll v1.0.9+0 [2e619515] + Expat_jll v2.7.3+0 [f5851436] + FFTW_jll v3.3.11+0 [a7073274] + GDAL_jll v304.1200.100+0 [d604d12d] + GEOS_jll v3.14.1+0 [b68b8c3f] + GMT_jll v6.6.1+0 [b0724c58] + GettextRuntime_jll v0.22.4+0 [61579ee1] + Ghostscript_jll v9.55.1+0 [59f7168a] + Giflib_jll v5.2.3+0 [7746bdde] + Glib_jll v2.86.2+0 [818ab7a1] + HDF4_jll v4.3.2+0 ⌅ [0234f1f7] + HDF5_jll v1.14.6+0 [e33a78d0] + Hwloc_jll v2.12.2+0 [a51ab1cf] + ICU_jll v76.2.0+0 [aacddb02] + JpegTurbo_jll v3.1.4+0 [b39eb1a6] + Kerberos_krb5_jll v1.21.3+0 ⌅ [17f450c3] + LAPACK32_jll v3.12.0+1 [88015f11] + LERC_jll v4.0.1+0 [1d63c593] + LLVMOpenMP_jll v18.1.8+0 [08be9ffa] + LibPQ_jll v16.8.0+0 ⌅ [e9f186c6] + Libffi_jll v3.4.7+0 [7e76a0d4] + Libglvnd_jll v1.7.1+1 [94ce4f54] + Libiconv_jll v1.18.0+0 [4b2f31a3] + Libmount_jll v2.41.2+0 [89763e89] + Libtiff_jll v4.7.2+0 [d3a379c0] + LittleCMS_jll v2.17.0+0 [5ced341a] + Lz4_jll v1.10.1+0 [7cb0a576] + MPICH_jll v4.3.2+0 [f1f71cc9] + MPItrampoline_jll v5.5.4+0 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 [7243133f] + NetCDF_jll v401.900.300+0 [656ef2d0] + OpenBLAS32_jll v0.3.29+0 [643b3616] + OpenJpeg_jll v2.5.5+0 [fe0851c0] + OpenMPI_jll v5.0.9+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [2f80f16e] + PCRE_jll v8.45.0+0 [58948b4f] + PROJ_jll v902.700.0+0 [784f63db] + Qhull_jll v10008.0.1004+0 [76ed43ae] + SQLite_jll v3.51.2+0 [e0b8ae26] + Thrift_jll v0.21.1+0 ⌅ [02c8fc9c] + XML2_jll v2.13.9+0 [ffd25f8a] + XZ_jll v5.8.2+0 [4f6342f7] + Xorg_libX11_jll v1.8.12+0 [0c0b7dd1] + Xorg_libXau_jll v1.0.13+0 [a3789734] + Xorg_libXdmcp_jll v1.1.6+0 [1082639a] + Xorg_libXext_jll v1.3.7+0 [a65dc6b1] + Xorg_libpciaccess_jll v0.18.1+0 [c7cfdc94] + Xorg_libxcb_jll v1.17.1+0 [c5fb5394] + Xorg_xtrans_jll v1.6.0+0 [3161d3a3] + Zstd_jll v1.5.7+1 [28df3c45] + boost_jll v1.87.0+0 [4611771a] + brotli_jll v1.2.0+0 [c4b69c83] + dlfcn_win32_jll v1.4.2+0 [477f73a3] + libaec_jll v1.1.4+0 [06c338fa] + libgeotiff_jll v100.702.400+0 [b53b4c65] + libpng_jll v1.6.54+0 [c5f90fcd] + libwebp_jll v1.6.0+0 [337d8026] + libzip_jll v1.11.3+0 [888e69b1] + muparser_jll v2.3.5+0 [fe1e1685] + snappy_jll v1.2.3+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [f43a241f] + Downloads v1.6.0 [7b1f6079] + FileWatching v1.11.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.11.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.2.0 [44cfe95a] + Pkg v1.11.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] + LibCURL_jll v8.6.0+0 [e37daf67] + LibGit2_jll v1.7.2+0 [29816b5a] + LibSSH2_jll v1.11.0+1 [c8ffd9c3] + MbedTLS_jll v2.28.6+0 [14a3606d] + MozillaCACerts_jll v2023.12.12 [4536629a] + OpenBLAS_jll v0.3.27+1 [efcefdf7] + PCRE2_jll v10.42.0+1 [83775a58] + Zlib_jll v1.2.13+1 [8e850b90] + libblastrampoline_jll v5.11.0+0 [8e850ede] + nghttp2_jll v1.59.0+0 [3f19e933] + p7zip_jll v17.4.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Building GMT → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/35b1101a8dbe34ffda3cb3755e7f733d1fe0c354/build.log` Installation completed after 22.59s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompiling project... ✗ libgeotiff_jll ✗ GDAL_jll ✗ GMT_jll ✗ GMT ✗ RemoteS 0 dependencies successfully precompiled in 45 seconds. 109 already precompiled. ERROR: LoadError: The following 2 direct dependencies failed to precompile: RemoteS Failed to precompile RemoteS [26020ff4-e92a-488e-a723-09c28e89e04a] to "/home/pkgeval/.julia/compiled/v1.11/RemoteS/jl_ZzQzs2". ERROR: LoadError: InitError: could not load library "/home/pkgeval/.julia/artifacts/0e25413977e1aa52abfecdd2bee850e964b8d477/lib/libproj.so" libsqlite3.so.0: cannot open shared object file: No such file or directory Stacktrace: [1] dlopen(s::String, flags::UInt32; throw_error::Bool) @ Base.Libc.Libdl ./libdl.jl:120 [2] dlopen(s::String, flags::UInt32) @ Base.Libc.Libdl ./libdl.jl:119 [3] macro expansion @ ~/.julia/packages/JLLWrappers/m2Pjh/src/products/library_generators.jl:63 [inlined] [4] __init__() @ PROJ_jll ~/.julia/packages/PROJ_jll/lq5nt/src/wrappers/x86_64-linux-gnu-cxx11.jl:50 [5] run_module_init(mod::Module, i::Int64) @ Base ./loading.jl:1378 [6] register_restored_modules(sv::Core.SimpleVector, pkg::Base.PkgId, path::String) @ Base ./loading.jl:1366 [7] _include_from_serialized(pkg::Base.PkgId, path::String, ocachepath::Nothing, depmods::Vector{Any}, ignore_native::Nothing; register::Bool) @ Base ./loading.jl:1254 [8] _include_from_serialized (repeats 2 times) @ ./loading.jl:1210 [inlined] [9] _require_search_from_serialized(pkg::Base.PkgId, sourcepath::String, build_id::UInt128, stalecheck::Bool; reasons::Dict{String, Int64}, DEPOT_PATH::Vector{String}) @ Base ./loading.jl:2057 [10] _require(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2527 [11] __require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2388 [12] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [13] invoke_in_world @ ./essentials.jl:1086 [inlined] [14] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2375 [15] macro expansion @ ./loading.jl:2314 [inlined] [16] macro expansion @ ./lock.jl:273 [inlined] [17] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2271 [18] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [19] invoke_in_world @ ./essentials.jl:1086 [inlined] [20] require(into::Module, mod::Symbol) @ Base ./loading.jl:2260 [21] include(mod::Module, _path::String) @ Base ./Base.jl:562 [22] top-level scope @ ~/.julia/packages/JLLWrappers/m2Pjh/src/toplevel_generators.jl:199 [23] include @ ./Base.jl:562 [inlined] [24] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:2924 [25] top-level scope @ stdin:6 during initialization of module PROJ_jll in expression starting at /home/pkgeval/.julia/packages/GMT_jll/NtNTV/src/wrappers/x86_64-linux-gnu.jl:6 in expression starting at /home/pkgeval/.julia/packages/GMT_jll/NtNTV/src/GMT_jll.jl:2 in expression starting at stdin:6 ERROR: LoadError: Failed to precompile GMT_jll [b68b8c3f-ed99-5bef-9675-4739d9426b26] to "/home/pkgeval/.julia/compiled/v1.11/GMT_jll/jl_uaZLb6". Stacktrace: [1] error(s::String) @ Base ./error.jl:35 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3217 [3] (::Base.var"#1110#1111"{Base.PkgId})() @ Base ./loading.jl:2579 [4] mkpidlock(f::Base.var"#1110#1111"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:95 [5] #mkpidlock#6 @ /opt/julia/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:90 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:116 [7] #invokelatest#2 @ ./essentials.jl:1057 [inlined] [8] invokelatest @ ./essentials.jl:1052 [inlined] [9] maybe_cachefile_lock(f::Base.var"#1110#1111"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3741 [10] maybe_cachefile_lock @ ./loading.jl:3738 [inlined] [11] _require(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2565 [12] __require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2388 [13] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [14] invoke_in_world @ ./essentials.jl:1086 [inlined] [15] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2375 [16] macro expansion @ ./loading.jl:2314 [inlined] [17] macro expansion @ ./lock.jl:273 [inlined] [18] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2271 [19] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [20] invoke_in_world @ ./essentials.jl:1086 [inlined] [21] require(into::Module, mod::Symbol) @ Base ./loading.jl:2260 [22] top-level scope @ ~/.julia/packages/GMT/YUDJi/src/GMT.jl:47 [23] include @ ./Base.jl:562 [inlined] [24] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:2924 [25] top-level scope @ stdin:6 in expression starting at /home/pkgeval/.julia/packages/GMT/YUDJi/src/GMT.jl:1 in expression starting at stdin:6 ERROR: LoadError: Failed to precompile GMT [5752ebe1-31b9-557e-87aa-f909b540aa54] to "/home/pkgeval/.julia/compiled/v1.11/GMT/jl_jaWCcP". Stacktrace: [1] error(s::String) @ Base ./error.jl:35 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3217 [3] (::Base.var"#1110#1111"{Base.PkgId})() @ Base ./loading.jl:2579 [4] mkpidlock(f::Base.var"#1110#1111"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:95 [5] #mkpidlock#6 @ /opt/julia/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:90 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:116 [7] #invokelatest#2 @ ./essentials.jl:1057 [inlined] [8] invokelatest @ ./essentials.jl:1052 [inlined] [9] maybe_cachefile_lock(f::Base.var"#1110#1111"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3741 [10] maybe_cachefile_lock @ ./loading.jl:3738 [inlined] [11] _require(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2565 [12] __require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2388 [13] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [14] invoke_in_world @ ./essentials.jl:1086 [inlined] [15] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2375 [16] macro expansion @ ./loading.jl:2314 [inlined] [17] macro expansion @ ./lock.jl:273 [inlined] [18] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2271 [19] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [20] invoke_in_world @ ./essentials.jl:1086 [inlined] [21] require(into::Module, mod::Symbol) @ Base ./loading.jl:2260 [22] include @ ./Base.jl:562 [inlined] [23] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:2924 [24] top-level scope @ stdin:6 in expression starting at /home/pkgeval/.julia/packages/RemoteS/dIqeF/src/RemoteS.jl:1 in expression starting at stdin:6 GMT Failed to precompile GMT [5752ebe1-31b9-557e-87aa-f909b540aa54] to "/home/pkgeval/.julia/compiled/v1.11/GMT/jl_pcHRfl". ERROR: LoadError: InitError: could not load library "/home/pkgeval/.julia/artifacts/0e25413977e1aa52abfecdd2bee850e964b8d477/lib/libproj.so" libsqlite3.so.0: cannot open shared object file: No such file or directory Stacktrace: [1] dlopen(s::String, flags::UInt32; throw_error::Bool) @ Base.Libc.Libdl ./libdl.jl:120 [2] dlopen(s::String, flags::UInt32) @ Base.Libc.Libdl ./libdl.jl:119 [3] macro expansion @ ~/.julia/packages/JLLWrappers/m2Pjh/src/products/library_generators.jl:63 [inlined] [4] __init__() @ PROJ_jll ~/.julia/packages/PROJ_jll/lq5nt/src/wrappers/x86_64-linux-gnu-cxx11.jl:50 [5] run_module_init(mod::Module, i::Int64) @ Base ./loading.jl:1378 [6] register_restored_modules(sv::Core.SimpleVector, pkg::Base.PkgId, path::String) @ Base ./loading.jl:1366 [7] _include_from_serialized(pkg::Base.PkgId, path::String, ocachepath::Nothing, depmods::Vector{Any}, ignore_native::Nothing; register::Bool) @ Base ./loading.jl:1254 [8] _include_from_serialized (repeats 2 times) @ ./loading.jl:1210 [inlined] [9] _require_search_from_serialized(pkg::Base.PkgId, sourcepath::String, build_id::UInt128, stalecheck::Bool; reasons::Dict{String, Int64}, DEPOT_PATH::Vector{String}) @ Base ./loading.jl:2057 [10] _require(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2527 [11] __require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2388 [12] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [13] invoke_in_world @ ./essentials.jl:1086 [inlined] [14] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2375 [15] macro expansion @ ./loading.jl:2314 [inlined] [16] macro expansion @ ./lock.jl:273 [inlined] [17] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2271 [18] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [19] invoke_in_world @ ./essentials.jl:1086 [inlined] [20] require(into::Module, mod::Symbol) @ Base ./loading.jl:2260 [21] include(mod::Module, _path::String) @ Base ./Base.jl:562 [22] top-level scope @ ~/.julia/packages/JLLWrappers/m2Pjh/src/toplevel_generators.jl:199 [23] include @ ./Base.jl:562 [inlined] [24] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:2924 [25] top-level scope @ stdin:6 during initialization of module PROJ_jll in expression starting at /home/pkgeval/.julia/packages/GMT_jll/NtNTV/src/wrappers/x86_64-linux-gnu.jl:6 in expression starting at /home/pkgeval/.julia/packages/GMT_jll/NtNTV/src/GMT_jll.jl:2 in expression starting at stdin:6 ERROR: LoadError: Failed to precompile GMT_jll [b68b8c3f-ed99-5bef-9675-4739d9426b26] to "/home/pkgeval/.julia/compiled/v1.11/GMT_jll/jl_yfyr4j". Stacktrace: [1] error(s::String) @ Base ./error.jl:35 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3217 [3] (::Base.var"#1110#1111"{Base.PkgId})() @ Base ./loading.jl:2579 [4] mkpidlock(f::Base.var"#1110#1111"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:95 [5] #mkpidlock#6 @ /opt/julia/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:90 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:116 [7] #invokelatest#2 @ ./essentials.jl:1057 [inlined] [8] invokelatest @ ./essentials.jl:1052 [inlined] [9] maybe_cachefile_lock(f::Base.var"#1110#1111"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3741 [10] maybe_cachefile_lock @ ./loading.jl:3738 [inlined] [11] _require(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2565 [12] __require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2388 [13] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [14] invoke_in_world @ ./essentials.jl:1086 [inlined] [15] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2375 [16] macro expansion @ ./loading.jl:2314 [inlined] [17] macro expansion @ ./lock.jl:273 [inlined] [18] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2271 [19] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [20] invoke_in_world @ ./essentials.jl:1086 [inlined] [21] require(into::Module, mod::Symbol) @ Base ./loading.jl:2260 [22] top-level scope @ ~/.julia/packages/GMT/YUDJi/src/GMT.jl:47 [23] include @ ./Base.jl:562 [inlined] [24] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:2924 [25] top-level scope @ stdin:6 in expression starting at /home/pkgeval/.julia/packages/GMT/YUDJi/src/GMT.jl:1 in expression starting at stdin:6 in expression starting at /PkgEval.jl/scripts/precompile.jl:34 Precompilation failed after 68.59s ################################################################################ # Testing # Testing RemoteS Status `/tmp/jl_UMH27Z/Project.toml` [7806a523] DecisionTree v0.12.4 ⌃ [5752ebe1] GMT v1.15.1 ⌅ [aea7be01] PrecompileTools v1.2.1 [26020ff4] RemoteS v1.3.7 [10745b16] Statistics v1.11.1 [ade2ca70] Dates v1.11.0 [de0858da] Printf v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_UMH27Z/Manifest.toml` [1520ce14] AbstractTrees v0.4.5 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [e2d170a0] DataValueInterfaces v1.0.0 [7806a523] DecisionTree v0.12.4 [8bb1440f] DelimitedFiles v1.9.1 ⌃ [5752ebe1] GMT v1.15.1 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.1 [b964fa9f] LaTeXStrings v1.4.0 [3da0fdf6] MPIPreferences v0.1.11 [bac558e1] OrderedCollections v1.8.1 ⌅ [aea7be01] PrecompileTools v1.2.1 [21216c6a] Preferences v1.5.1 ⌅ [08abe8d2] PrettyTables v2.4.0 [189a3867] Reexport v1.2.2 [26020ff4] RemoteS v1.3.7 [6e75b9c4] ScikitLearnBase v0.5.0 [10745b16] Statistics v1.11.1 [892a3eda] StringManipulation v0.4.2 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [8ce61222] Arrow_jll v19.0.1+0 [0b7ba130] Blosc_jll v1.21.7+0 [6e34b625] Bzip2_jll v1.0.9+0 [2e619515] Expat_jll v2.7.3+0 [f5851436] FFTW_jll v3.3.11+0 [a7073274] GDAL_jll v304.1200.100+0 [d604d12d] GEOS_jll v3.14.1+0 [b68b8c3f] GMT_jll v6.6.1+0 [b0724c58] GettextRuntime_jll v0.22.4+0 [61579ee1] Ghostscript_jll v9.55.1+0 [59f7168a] Giflib_jll v5.2.3+0 [7746bdde] Glib_jll v2.86.2+0 [818ab7a1] HDF4_jll v4.3.2+0 ⌅ [0234f1f7] HDF5_jll v1.14.6+0 [e33a78d0] Hwloc_jll v2.12.2+0 [a51ab1cf] ICU_jll v76.2.0+0 [aacddb02] JpegTurbo_jll v3.1.4+0 [b39eb1a6] Kerberos_krb5_jll v1.21.3+0 ⌅ [17f450c3] LAPACK32_jll v3.12.0+1 [88015f11] LERC_jll v4.0.1+0 [1d63c593] LLVMOpenMP_jll v18.1.8+0 [08be9ffa] LibPQ_jll v16.8.0+0 ⌅ [e9f186c6] Libffi_jll v3.4.7+0 [7e76a0d4] Libglvnd_jll v1.7.1+1 [94ce4f54] Libiconv_jll v1.18.0+0 [4b2f31a3] Libmount_jll v2.41.2+0 [89763e89] Libtiff_jll v4.7.2+0 [d3a379c0] LittleCMS_jll v2.17.0+0 [5ced341a] Lz4_jll v1.10.1+0 [7cb0a576] MPICH_jll v4.3.2+0 [f1f71cc9] MPItrampoline_jll v5.5.4+0 [9237b28f] MicrosoftMPI_jll v10.1.4+3 [7243133f] NetCDF_jll v401.900.300+0 [656ef2d0] OpenBLAS32_jll v0.3.29+0 [643b3616] OpenJpeg_jll v2.5.5+0 [fe0851c0] OpenMPI_jll v5.0.9+0 [458c3c95] OpenSSL_jll v3.5.4+0 [2f80f16e] PCRE_jll v8.45.0+0 [58948b4f] PROJ_jll v902.700.0+0 [784f63db] Qhull_jll v10008.0.1004+0 [76ed43ae] SQLite_jll v3.51.2+0 [e0b8ae26] Thrift_jll v0.21.1+0 ⌅ [02c8fc9c] XML2_jll v2.13.9+0 [ffd25f8a] XZ_jll v5.8.2+0 [4f6342f7] Xorg_libX11_jll v1.8.12+0 [0c0b7dd1] Xorg_libXau_jll v1.0.13+0 [a3789734] Xorg_libXdmcp_jll v1.1.6+0 [1082639a] Xorg_libXext_jll v1.3.7+0 [a65dc6b1] Xorg_libpciaccess_jll v0.18.1+0 [c7cfdc94] Xorg_libxcb_jll v1.17.1+0 [c5fb5394] Xorg_xtrans_jll v1.6.0+0 [3161d3a3] Zstd_jll v1.5.7+1 [28df3c45] boost_jll v1.87.0+0 [4611771a] brotli_jll v1.2.0+0 [c4b69c83] dlfcn_win32_jll v1.4.2+0 [477f73a3] libaec_jll v1.1.4+0 [06c338fa] libgeotiff_jll v100.702.400+0 [b53b4c65] libpng_jll v1.6.54+0 [c5f90fcd] libwebp_jll v1.6.0+0 [337d8026] libzip_jll v1.11.3+0 [888e69b1] muparser_jll v2.3.5+0 [fe1e1685] snappy_jll v1.2.3+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [f43a241f] Downloads v1.6.0 [7b1f6079] FileWatching v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.11.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.2.0 [44cfe95a] Pkg v1.11.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] LibCURL_jll v8.6.0+0 [e37daf67] LibGit2_jll v1.7.2+0 [29816b5a] LibSSH2_jll v1.11.0+1 [c8ffd9c3] MbedTLS_jll v2.28.6+0 [14a3606d] MozillaCACerts_jll v2023.12.12 [4536629a] OpenBLAS_jll v0.3.27+1 [efcefdf7] PCRE2_jll v10.42.0+1 [83775a58] Zlib_jll v1.2.13+1 [8e850b90] libblastrampoline_jll v5.11.0+0 [8e850ede] nghttp2_jll v1.59.0+0 [3f19e933] p7zip_jll v17.4.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... Precompiling RemoteS... ✗ libgeotiff_jll ✗ GDAL_jll ✗ GMT_jll ✗ GMT Info Given RemoteS was explicitly requested, output will be shown live  ERROR: LoadError: InitError: could not load library "/home/pkgeval/.julia/artifacts/0e25413977e1aa52abfecdd2bee850e964b8d477/lib/libproj.so" libsqlite3.so.0: cannot open shared object file: No such file or directory Stacktrace:  [1] dlopen(s::String, flags::UInt32; throw_error::Bool)  @ Base.Libc.Libdl ./libdl.jl:120  [2] dlopen(s::String, flags::UInt32)  @ Base.Libc.Libdl ./libdl.jl:119  [3] macro expansion  @ ~/.julia/packages/JLLWrappers/m2Pjh/src/products/library_generators.jl:63 [inlined]  [4] __init__()  @ PROJ_jll ~/.julia/packages/PROJ_jll/lq5nt/src/wrappers/x86_64-linux-gnu-cxx11.jl:50  [5] run_module_init(mod::Module, i::Int64)  @ Base ./loading.jl:1378  [6] register_restored_modules(sv::Core.SimpleVector, pkg::Base.PkgId, path::String)  @ Base ./loading.jl:1366  [7] _include_from_serialized(pkg::Base.PkgId, path::String, ocachepath::Nothing, depmods::Vector{Any}, ignore_native::Nothing; register::Bool)  @ Base ./loading.jl:1254  [8] _include_from_serialized (repeats 2 times)  @ ./loading.jl:1210 [inlined]  [9] _require_search_from_serialized(pkg::Base.PkgId, sourcepath::String, build_id::UInt128, stalecheck::Bool; reasons::Dict{String, Int64}, DEPOT_PATH::Vector{String})  @ Base ./loading.jl:2057  [10] _require(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2527  [11] __require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2388  [12] #invoke_in_world#3  @ ./essentials.jl:1089 [inlined]  [13] invoke_in_world  @ ./essentials.jl:1086 [inlined]  [14] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2375  [15] macro expansion  @ ./loading.jl:2314 [inlined]  [16] macro expansion  @ ./lock.jl:273 [inlined]  [17] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2271  [18] #invoke_in_world#3  @ ./essentials.jl:1089 [inlined]  [19] invoke_in_world  @ ./essentials.jl:1086 [inlined]  [20] require(into::Module, mod::Symbol)  @ Base ./loading.jl:2260  [21] include(mod::Module, _path::String)  @ Base ./Base.jl:562  [22] top-level scope  @ ~/.julia/packages/JLLWrappers/m2Pjh/src/toplevel_generators.jl:199  [23] include  @ ./Base.jl:562 [inlined]  [24] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String)  @ Base ./loading.jl:2924  [25] top-level scope  @ stdin:6 during initialization of module PROJ_jll in expression starting at /home/pkgeval/.julia/packages/GMT_jll/NtNTV/src/wrappers/x86_64-linux-gnu.jl:6 in expression starting at /home/pkgeval/.julia/packages/GMT_jll/NtNTV/src/GMT_jll.jl:2 in expression starting at stdin:6 ERROR: LoadError: Failed to precompile GMT_jll [b68b8c3f-ed99-5bef-9675-4739d9426b26] to "/home/pkgeval/.julia/compiled/v1.11/GMT_jll/jl_wQvit5". Stacktrace:  [1] error(s::String)  @ Base ./error.jl:35  [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing)  @ Base ./loading.jl:3217  [3] (::Base.var"#1110#1111"{Base.PkgId})()  @ Base ./loading.jl:2579  [4] mkpidlock(f::Base.var"#1110#1111"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool})  @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:95  [5] #mkpidlock#6  @ /opt/julia/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:90 [inlined]  [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64})  @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:116  [7] #invokelatest#2  @ ./essentials.jl:1057 [inlined]  [8] invokelatest  @ ./essentials.jl:1052 [inlined]  [9] maybe_cachefile_lock(f::Base.var"#1110#1111"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)  @ Base ./loading.jl:3741  [10] maybe_cachefile_lock  @ ./loading.jl:3738 [inlined]  [11] _require(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2565  [12] __require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2388  [13] #invoke_in_world#3  @ ./essentials.jl:1089 [inlined]  [14] invoke_in_world  @ ./essentials.jl:1086 [inlined]  [15] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2375  [16] macro expansion  @ ./loading.jl:2314 [inlined]  [17] macro expansion  @ ./lock.jl:273 [inlined]  [18] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2271  [19] #invoke_in_world#3  @ ./essentials.jl:1089 [inlined]  [20] invoke_in_world  @ ./essentials.jl:1086 [inlined]  [21] require(into::Module, mod::Symbol)  @ Base ./loading.jl:2260  [22] top-level scope  @ ~/.julia/packages/GMT/YUDJi/src/GMT.jl:47  [23] include  @ ./Base.jl:562 [inlined]  [24] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String)  @ Base ./loading.jl:2924  [25] top-level scope  @ stdin:6 in expression starting at /home/pkgeval/.julia/packages/GMT/YUDJi/src/GMT.jl:1 in expression starting at stdin:6 ERROR: LoadError: Failed to precompile GMT [5752ebe1-31b9-557e-87aa-f909b540aa54] to "/home/pkgeval/.julia/compiled/v1.11/GMT/jl_bBGKAL". Stacktrace:  [1] error(s::String)  @ Base ./error.jl:35  [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing)  @ Base ./loading.jl:3217  [3] (::Base.var"#1110#1111"{Base.PkgId})()  @ Base ./loading.jl:2579  [4] mkpidlock(f::Base.var"#1110#1111"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool})  @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:95  [5] #mkpidlock#6  @ /opt/julia/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:90 [inlined]  [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64})  @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:116  [7] #invokelatest#2  @ ./essentials.jl:1057 [inlined]  [8] invokelatest  @ ./essentials.jl:1052 [inlined]  [9] maybe_cachefile_lock(f::Base.var"#1110#1111"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)  @ Base ./loading.jl:3741  [10] maybe_cachefile_lock  @ ./loading.jl:3738 [inlined]  [11] _require(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2565  [12] __require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2388  [13] #invoke_in_world#3  @ ./essentials.jl:1089 [inlined]  [14] invoke_in_world  @ ./essentials.jl:1086 [inlined]  [15] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2375  [16] macro expansion  @ ./loading.jl:2314 [inlined]  [17] macro expansion  @ ./lock.jl:273 [inlined]  [18] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2271  [19] #invoke_in_world#3  @ ./essentials.jl:1089 [inlined]  [20] invoke_in_world  @ ./essentials.jl:1086 [inlined]  [21] require(into::Module, mod::Symbol)  @ Base ./loading.jl:2260  [22] include  @ ./Base.jl:562 [inlined]  [23] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:2924  [24] top-level scope  @ stdin:6 in expression starting at /home/pkgeval/.julia/packages/RemoteS/dIqeF/src/RemoteS.jl:1 in expression starting at stdin:6 ✗ RemoteS 0 dependencies successfully precompiled in 44 seconds. 106 already precompiled. ERROR: LoadError: The following 2 direct dependencies failed to precompile: RemoteS Failed to precompile RemoteS [26020ff4-e92a-488e-a723-09c28e89e04a] to "/home/pkgeval/.julia/compiled/v1.11/RemoteS/jl_E98Tp4". ERROR: LoadError: InitError: could not load library "/home/pkgeval/.julia/artifacts/0e25413977e1aa52abfecdd2bee850e964b8d477/lib/libproj.so" libsqlite3.so.0: cannot open shared object file: No such file or directory Stacktrace: [1] dlopen(s::String, flags::UInt32; throw_error::Bool) @ Base.Libc.Libdl ./libdl.jl:120 [2] dlopen(s::String, flags::UInt32) @ Base.Libc.Libdl ./libdl.jl:119 [3] macro expansion @ ~/.julia/packages/JLLWrappers/m2Pjh/src/products/library_generators.jl:63 [inlined] [4] __init__() @ PROJ_jll ~/.julia/packages/PROJ_jll/lq5nt/src/wrappers/x86_64-linux-gnu-cxx11.jl:50 [5] run_module_init(mod::Module, i::Int64) @ Base ./loading.jl:1378 [6] register_restored_modules(sv::Core.SimpleVector, pkg::Base.PkgId, path::String) @ Base ./loading.jl:1366 [7] _include_from_serialized(pkg::Base.PkgId, path::String, ocachepath::Nothing, depmods::Vector{Any}, ignore_native::Nothing; register::Bool) @ Base ./loading.jl:1254 [8] _include_from_serialized (repeats 2 times) @ ./loading.jl:1210 [inlined] [9] _require_search_from_serialized(pkg::Base.PkgId, sourcepath::String, build_id::UInt128, stalecheck::Bool; reasons::Dict{String, Int64}, DEPOT_PATH::Vector{String}) @ Base ./loading.jl:2057 [10] _require(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2527 [11] __require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2388 [12] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [13] invoke_in_world @ ./essentials.jl:1086 [inlined] [14] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2375 [15] macro expansion @ ./loading.jl:2314 [inlined] [16] macro expansion @ ./lock.jl:273 [inlined] [17] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2271 [18] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [19] invoke_in_world @ ./essentials.jl:1086 [inlined] [20] require(into::Module, mod::Symbol) @ Base ./loading.jl:2260 [21] include(mod::Module, _path::String) @ Base ./Base.jl:562 [22] top-level scope @ ~/.julia/packages/JLLWrappers/m2Pjh/src/toplevel_generators.jl:199 [23] include @ ./Base.jl:562 [inlined] [24] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:2924 [25] top-level scope @ stdin:6 during initialization of module PROJ_jll in expression starting at /home/pkgeval/.julia/packages/GMT_jll/NtNTV/src/wrappers/x86_64-linux-gnu.jl:6 in expression starting at /home/pkgeval/.julia/packages/GMT_jll/NtNTV/src/GMT_jll.jl:2 in expression starting at stdin:6 ERROR: LoadError: Failed to precompile GMT_jll [b68b8c3f-ed99-5bef-9675-4739d9426b26] to "/home/pkgeval/.julia/compiled/v1.11/GMT_jll/jl_wQvit5". Stacktrace: [1] error(s::String) @ Base ./error.jl:35 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3217 [3] (::Base.var"#1110#1111"{Base.PkgId})() @ Base ./loading.jl:2579 [4] mkpidlock(f::Base.var"#1110#1111"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:95 [5] #mkpidlock#6 @ /opt/julia/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:90 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:116 [7] #invokelatest#2 @ ./essentials.jl:1057 [inlined] [8] invokelatest @ ./essentials.jl:1052 [inlined] [9] maybe_cachefile_lock(f::Base.var"#1110#1111"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3741 [10] maybe_cachefile_lock @ ./loading.jl:3738 [inlined] [11] _require(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2565 [12] __require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2388 [13] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [14] invoke_in_world @ ./essentials.jl:1086 [inlined] [15] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2375 [16] macro expansion @ ./loading.jl:2314 [inlined] [17] macro expansion @ ./lock.jl:273 [inlined] [18] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2271 [19] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [20] invoke_in_world @ ./essentials.jl:1086 [inlined] [21] require(into::Module, mod::Symbol) @ Base ./loading.jl:2260 [22] top-level scope @ ~/.julia/packages/GMT/YUDJi/src/GMT.jl:47 [23] include @ ./Base.jl:562 [inlined] [24] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:2924 [25] top-level scope @ stdin:6 in expression starting at /home/pkgeval/.julia/packages/GMT/YUDJi/src/GMT.jl:1 in expression starting at stdin:6 ERROR: LoadError: Failed to precompile GMT [5752ebe1-31b9-557e-87aa-f909b540aa54] to "/home/pkgeval/.julia/compiled/v1.11/GMT/jl_bBGKAL". Stacktrace: [1] error(s::String) @ Base ./error.jl:35 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3217 [3] (::Base.var"#1110#1111"{Base.PkgId})() @ Base ./loading.jl:2579 [4] mkpidlock(f::Base.var"#1110#1111"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:95 [5] #mkpidlock#6 @ /opt/julia/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:90 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:116 [7] #invokelatest#2 @ ./essentials.jl:1057 [inlined] [8] invokelatest @ ./essentials.jl:1052 [inlined] [9] maybe_cachefile_lock(f::Base.var"#1110#1111"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3741 [10] maybe_cachefile_lock @ ./loading.jl:3738 [inlined] [11] _require(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2565 [12] __require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2388 [13] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [14] invoke_in_world @ ./essentials.jl:1086 [inlined] [15] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2375 [16] macro expansion @ ./loading.jl:2314 [inlined] [17] macro expansion @ ./lock.jl:273 [inlined] [18] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2271 [19] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [20] invoke_in_world @ ./essentials.jl:1086 [inlined] [21] require(into::Module, mod::Symbol) @ Base ./loading.jl:2260 [22] include @ ./Base.jl:562 [inlined] [23] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:2924 [24] top-level scope @ stdin:6 in expression starting at /home/pkgeval/.julia/packages/RemoteS/dIqeF/src/RemoteS.jl:1 in expression starting at stdin:6 GMT Failed to precompile GMT [5752ebe1-31b9-557e-87aa-f909b540aa54] to "/home/pkgeval/.julia/compiled/v1.11/GMT/jl_JFXRKZ". ERROR: LoadError: InitError: could not load library "/home/pkgeval/.julia/artifacts/0e25413977e1aa52abfecdd2bee850e964b8d477/lib/libproj.so" libsqlite3.so.0: cannot open shared object file: No such file or directory Stacktrace: [1] dlopen(s::String, flags::UInt32; throw_error::Bool) @ Base.Libc.Libdl ./libdl.jl:120 [2] dlopen(s::String, flags::UInt32) @ Base.Libc.Libdl ./libdl.jl:119 [3] macro expansion @ ~/.julia/packages/JLLWrappers/m2Pjh/src/products/library_generators.jl:63 [inlined] [4] __init__() @ PROJ_jll ~/.julia/packages/PROJ_jll/lq5nt/src/wrappers/x86_64-linux-gnu-cxx11.jl:50 [5] run_module_init(mod::Module, i::Int64) @ Base ./loading.jl:1378 [6] register_restored_modules(sv::Core.SimpleVector, pkg::Base.PkgId, path::String) @ Base ./loading.jl:1366 [7] _include_from_serialized(pkg::Base.PkgId, path::String, ocachepath::Nothing, depmods::Vector{Any}, ignore_native::Nothing; register::Bool) @ Base ./loading.jl:1254 [8] _include_from_serialized (repeats 2 times) @ ./loading.jl:1210 [inlined] [9] _require_search_from_serialized(pkg::Base.PkgId, sourcepath::String, build_id::UInt128, stalecheck::Bool; reasons::Dict{String, Int64}, DEPOT_PATH::Vector{String}) @ Base ./loading.jl:2057 [10] _require(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2527 [11] __require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2388 [12] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [13] invoke_in_world @ ./essentials.jl:1086 [inlined] [14] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2375 [15] macro expansion @ ./loading.jl:2314 [inlined] [16] macro expansion @ ./lock.jl:273 [inlined] [17] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2271 [18] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [19] invoke_in_world @ ./essentials.jl:1086 [inlined] [20] require(into::Module, mod::Symbol) @ Base ./loading.jl:2260 [21] include(mod::Module, _path::String) @ Base ./Base.jl:562 [22] top-level scope @ ~/.julia/packages/JLLWrappers/m2Pjh/src/toplevel_generators.jl:199 [23] include @ ./Base.jl:562 [inlined] [24] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:2924 [25] top-level scope @ stdin:6 during initialization of module PROJ_jll in expression starting at /home/pkgeval/.julia/packages/GMT_jll/NtNTV/src/wrappers/x86_64-linux-gnu.jl:6 in expression starting at /home/pkgeval/.julia/packages/GMT_jll/NtNTV/src/GMT_jll.jl:2 in expression starting at stdin:6 ERROR: LoadError: Failed to precompile GMT_jll [b68b8c3f-ed99-5bef-9675-4739d9426b26] to "/home/pkgeval/.julia/compiled/v1.11/GMT_jll/jl_EcqR9I". Stacktrace: [1] error(s::String) @ Base ./error.jl:35 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3217 [3] (::Base.var"#1110#1111"{Base.PkgId})() @ Base ./loading.jl:2579 [4] mkpidlock(f::Base.var"#1110#1111"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:95 [5] #mkpidlock#6 @ /opt/julia/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:90 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:116 [7] #invokelatest#2 @ ./essentials.jl:1057 [inlined] [8] invokelatest @ ./essentials.jl:1052 [inlined] [9] maybe_cachefile_lock(f::Base.var"#1110#1111"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3741 [10] maybe_cachefile_lock @ ./loading.jl:3738 [inlined] [11] _require(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2565 [12] __require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2388 [13] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [14] invoke_in_world @ ./essentials.jl:1086 [inlined] [15] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2375 [16] macro expansion @ ./loading.jl:2314 [inlined] [17] macro expansion @ ./lock.jl:273 [inlined] [18] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2271 [19] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [20] invoke_in_world @ ./essentials.jl:1086 [inlined] [21] require(into::Module, mod::Symbol) @ Base ./loading.jl:2260 [22] top-level scope @ ~/.julia/packages/GMT/YUDJi/src/GMT.jl:47 [23] include @ ./Base.jl:562 [inlined] [24] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:2924 [25] top-level scope @ stdin:6 in expression starting at /home/pkgeval/.julia/packages/GMT/YUDJi/src/GMT.jl:1 in expression starting at stdin:6 in expression starting at /home/pkgeval/.julia/packages/RemoteS/dIqeF/test/runtests.jl:1 Testing failed after 57.21s ERROR: LoadError: Package RemoteS errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2128 [3] test @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2011 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:481 [5] test(pkgs::Vector{Pkg.Types.PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:159 [6] test @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:147 [inlined] [7] #test#74 @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:146 [inlined] [8] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:223 in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 PkgEval failed after 176.74s: package requires a missing binary dependency