Package evaluation to test PythonCall on Julia 1.11.8 (29b3528cce*) started at 2026-01-20T04:20:40.561 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.11` Set-up completed after 8.05s ################################################################################ # Installation # Installing PythonCall... Resolving package versions... Updating `~/.julia/environments/v1.11/Project.toml` [6099a3de] + PythonCall v0.9.31 Updating `~/.julia/environments/v1.11/Manifest.toml` [992eb4ea] + CondaPkg v0.2.33 [9a962f9c] + DataAPI v1.16.0 [e2d170a0] + DataValueInterfaces v1.0.0 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 [0f8b85d8] + JSON3 v1.14.3 [1914dd2f] + MacroTools v0.5.16 [0b3b1443] + MicroMamba v0.1.14 [bac558e1] + OrderedCollections v1.8.1 [69de0a69] + Parsers v2.8.3 [fa939f87] + Pidfile v1.3.0 ⌅ [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.5.1 [6099a3de] + PythonCall v0.9.31 [6c6a2e73] + Scratch v1.3.0 [856f2bd8] + StructTypes v1.11.0 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [e17b2a0c] + UnsafePointers v1.0.0 ⌅ [f8abcde7] + micromamba_jll v1.5.12+0 [4d7b5844] + pixi_jll v0.41.3+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [f43a241f] + Downloads v1.6.0 [7b1f6079] + FileWatching v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.2.0 [44cfe95a] + Pkg v1.11.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [deac9b47] + LibCURL_jll v8.6.0+0 [e37daf67] + LibGit2_jll v1.7.2+0 [29816b5a] + LibSSH2_jll v1.11.0+1 [c8ffd9c3] + MbedTLS_jll v2.28.6+0 [14a3606d] + MozillaCACerts_jll v2023.12.12 [83775a58] + Zlib_jll v1.2.13+1 [8e850ede] + nghttp2_jll v1.59.0+0 [3f19e933] + p7zip_jll v17.4.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 4.98s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 86.48s ################################################################################ # Testing # Testing PythonCall Status `/tmp/jl_ChSlpF/Project.toml` [4c88cf16] Aqua v0.8.14 [992eb4ea] CondaPkg v0.2.33 [438e738f] PyCall v1.96.4 [6099a3de] PythonCall v0.9.31 [bd369af6] Tables v1.12.1 [f8b46487] TestItemRunner v1.1.4 [ade2ca70] Dates v1.11.0 [d6f4376e] Markdown v1.11.0 [9e88b42a] Serialization v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_ChSlpF/Manifest.toml` [4c88cf16] Aqua v0.8.14 [34da2185] Compat v4.18.1 [8f4d0f93] Conda v1.10.3 [992eb4ea] CondaPkg v0.2.33 [9a962f9c] DataAPI v1.16.0 [e2d170a0] DataValueInterfaces v1.0.0 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.1 [682c06a0] JSON v1.4.0 [0f8b85d8] JSON3 v1.14.3 [1914dd2f] MacroTools v0.5.16 [0b3b1443] MicroMamba v0.1.14 [bac558e1] OrderedCollections v1.8.1 [69de0a69] Parsers v2.8.3 [fa939f87] Pidfile v1.3.0 ⌅ [aea7be01] PrecompileTools v1.2.1 [21216c6a] Preferences v1.5.1 [438e738f] PyCall v1.96.4 [6099a3de] PythonCall v0.9.31 [6c6a2e73] Scratch v1.3.0 [856f2bd8] StructTypes v1.11.0 [ec057cc2] StructUtils v2.6.2 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [f8b46487] TestItemRunner v1.1.4 [1c621080] TestItems v1.0.0 [e17b2a0c] UnsafePointers v1.0.0 [81def892] VersionParsing v1.3.0 ⌅ [f8abcde7] micromamba_jll v1.5.12+0 [4d7b5844] pixi_jll v0.41.3+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [f43a241f] Downloads v1.6.0 [7b1f6079] FileWatching v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.11.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.2.0 [44cfe95a] Pkg v1.11.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] LibCURL_jll v8.6.0+0 [e37daf67] LibGit2_jll v1.7.2+0 [29816b5a] LibSSH2_jll v1.11.0+1 [c8ffd9c3] MbedTLS_jll v2.28.6+0 [14a3606d] MozillaCACerts_jll v2023.12.12 [4536629a] OpenBLAS_jll v0.3.27+1 [83775a58] Zlib_jll v1.2.13+1 [8e850b90] libblastrampoline_jll v5.11.0+0 [8e850ede] nghttp2_jll v1.59.0+0 [3f19e933] p7zip_jll v17.4.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... CondaPkg Found dependencies: /home/pkgeval/.julia/packages/PythonCall/83z4q/CondaPkg.toml CondaPkg Found dependencies: /home/pkgeval/.julia/packages/CondaPkg/0UqYV/CondaPkg.toml CondaPkg Resolving changes + libstdcxx + libstdcxx-ng + python CondaPkg Initialising pixi │ /home/pkgeval/.julia/artifacts/cefba4912c2b400756d043a2563ef77a0088866b/bin/pixi │ init │ --format pixi └ /tmp/jl_ChSlpF/.CondaPkg ✔ Created /tmp/jl_ChSlpF/.CondaPkg/pixi.toml CondaPkg Wrote /tmp/jl_ChSlpF/.CondaPkg/pixi.toml │ [dependencies] │ libstdcxx = ">=3.4,<14.0" │ libstdcxx-ng = ">=3.4,<14.0" │ │ [dependencies.python] │ channel = "conda-forge" │ build = "*cp*" │ version = ">=3.10,!=3.14.0,!=3.14.1,<4" │ │ [project] │ name = ".CondaPkg" │ platforms = ["linux-64"] │ channels = ["conda-forge"] │ channel-priority = "strict" └ description = "automatically generated by CondaPkg.jl" CondaPkg Installing packages │ /home/pkgeval/.julia/artifacts/cefba4912c2b400756d043a2563ef77a0088866b/bin/pixi │ install └ --manifest-path /tmp/jl_ChSlpF/.CondaPkg/pixi.toml ✔ The default environment has been installed. pyside6: Error During Test at /home/pkgeval/.julia/packages/PythonCall/83z4q/test/Compat.jl:13 Test threw exception Expression: PythonCall.event_loop_on(g) isa Timer Python: ModuleNotFoundError: No module named 'PySide6' Python stacktrace: [1] new_event_loop_callback @ :12 Stacktrace: [1] pythrow() @ PythonCall.Core ~/.julia/packages/PythonCall/83z4q/src/Core/err.jl:77 [2] errcheck @ ~/.julia/packages/PythonCall/83z4q/src/Core/err.jl:10 [inlined] [3] pycallargs(f::PythonCall.Py, args::PythonCall.Py) @ PythonCall.Core ~/.julia/packages/PythonCall/83z4q/src/Core/builtins.jl:194 [4] #pycall#23 @ ~/.julia/packages/PythonCall/83z4q/src/Core/builtins.jl:213 [inlined] [5] pycall @ ~/.julia/packages/PythonCall/83z4q/src/Core/builtins.jl:203 [inlined] [6] Py @ ~/.julia/packages/PythonCall/83z4q/src/Core/Py.jl:363 [inlined] [7] event_loop_on(g::Symbol; interval::Float64, fix::Bool) @ PythonCall.Compat ~/.julia/packages/PythonCall/83z4q/src/Compat/gui.jl:195 [8] event_loop_on @ ~/.julia/packages/PythonCall/83z4q/src/Compat/gui.jl:192 [inlined] [9] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:677 [inlined] [10] macro expansion @ ~/.julia/packages/PythonCall/83z4q/test/Compat.jl:13 [inlined] [11] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1798 [inlined] [12] macro expansion @ ~/.julia/packages/PythonCall/83z4q/test/Compat.jl:8 [inlined] [13] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [14] top-level scope @ ~/.julia/packages/PythonCall/83z4q/test/Compat.jl:8 matplotlib issue 676: Error During Test at /home/pkgeval/.julia/packages/PythonCall/83z4q/test/Compat.jl:20 Got exception outside of a @test Python: ModuleNotFoundError: No module named 'matplotlib' Python stacktrace: none Stacktrace: [1] pythrow() @ PythonCall.Core ~/.julia/packages/PythonCall/83z4q/src/Core/err.jl:77 [2] errcheck @ ~/.julia/packages/PythonCall/83z4q/src/Core/err.jl:10 [inlined] [3] pyimport(m::String) @ PythonCall.Core ~/.julia/packages/PythonCall/83z4q/src/Core/builtins.jl:1458 [4] macro expansion @ ~/.julia/packages/PythonCall/83z4q/test/Compat.jl:22 [inlined] [5] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [6] top-level scope @ ~/.julia/packages/PythonCall/83z4q/test/Compat.jl:21 [7] eval @ ./boot.jl:430 [inlined] [8] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2777 [9] include_string(m::Module, txt::String, fname::String) @ Base ./loading.jl:2787 [10] #invokelatest#2 @ ./essentials.jl:1055 [inlined] [11] invokelatest @ ./essentials.jl:1052 [inlined] [12] #8 @ ~/.julia/packages/TestItemRunner/ax5HJ/src/TestItemRunner.jl:119 [inlined] [13] withpath(f::TestItemRunner.var"#8#12"{String, String, Module}, path::String) @ TestItemRunner ~/.julia/packages/TestItemRunner/ax5HJ/src/vendored_code.jl:7 [14] #7 @ ~/.julia/packages/TestItemRunner/ax5HJ/src/TestItemRunner.jl:118 [inlined] [15] cd(f::TestItemRunner.var"#7#11"{String, String, Module}, dir::String) @ Base.Filesystem ./file.jl:112 [16] run_testitem(filepath::String, use_default_usings::Bool, setups::Vector{Symbol}, package_name::String, original_code::String, line::Int64, column::Int64, test_setup_module_set::TestItemRunner.TestSetupModuleSet, testsetups::Dict{Symbol, Any}) @ TestItemRunner ~/.julia/packages/TestItemRunner/ax5HJ/src/TestItemRunner.jl:117 [17] run_tests(path::String; filter::Nothing, verbose::Bool) @ TestItemRunner ~/.julia/packages/TestItemRunner/ax5HJ/src/TestItemRunner.jl:230 [18] run_tests(path::String) @ TestItemRunner ~/.julia/packages/TestItemRunner/ax5HJ/src/TestItemRunner.jl:134 [19] top-level scope @ ~/.julia/packages/PythonCall/83z4q/test/runtests.jl:11 [20] include(fname::String) @ Main ./sysimg.jl:38 [21] top-level scope @ none:6 ┌ Warning: Skipping PyCall.jl tests. └ @ Main.var"##271" ~/.julia/packages/PythonCall/83z4q/test/Compat.jl:67 Main.var"##293".Foo(1) Main.var"##293".Foo(1) __array__: Error During Test at /home/pkgeval/.julia/packages/PythonCall/83z4q/test/JlWrap.jl:316 Got exception outside of a @test Python: ModuleNotFoundError: No module named 'numpy' Python stacktrace: none Stacktrace: [1] pythrow() @ PythonCall.Core ~/.julia/packages/PythonCall/83z4q/src/Core/err.jl:77 [2] errcheck @ ~/.julia/packages/PythonCall/83z4q/src/Core/err.jl:10 [inlined] [3] pyimport(m::String) @ PythonCall.Core ~/.julia/packages/PythonCall/83z4q/src/Core/builtins.jl:1458 [4] macro expansion @ ~/.julia/packages/PythonCall/83z4q/test/JlWrap.jl:318 [inlined] [5] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [6] top-level scope @ ~/.julia/packages/PythonCall/83z4q/test/JlWrap.jl:317 [7] eval @ ./boot.jl:430 [inlined] [8] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2777 [9] include_string(m::Module, txt::String, fname::String) @ Base ./loading.jl:2787 [10] #invokelatest#2 @ ./essentials.jl:1055 [inlined] [11] invokelatest @ ./essentials.jl:1052 [inlined] [12] #8 @ ~/.julia/packages/TestItemRunner/ax5HJ/src/TestItemRunner.jl:119 [inlined] [13] withpath(f::TestItemRunner.var"#8#12"{String, String, Module}, path::String) @ TestItemRunner ~/.julia/packages/TestItemRunner/ax5HJ/src/vendored_code.jl:7 [14] #7 @ ~/.julia/packages/TestItemRunner/ax5HJ/src/TestItemRunner.jl:118 [inlined] [15] cd(f::TestItemRunner.var"#7#11"{String, String, Module}, dir::String) @ Base.Filesystem ./file.jl:112 [16] run_testitem(filepath::String, use_default_usings::Bool, setups::Vector{Symbol}, package_name::String, original_code::String, line::Int64, column::Int64, test_setup_module_set::TestItemRunner.TestSetupModuleSet, testsetups::Dict{Symbol, Any}) @ TestItemRunner ~/.julia/packages/TestItemRunner/ax5HJ/src/TestItemRunner.jl:117 [17] run_tests(path::String; filter::Nothing, verbose::Bool) @ TestItemRunner ~/.julia/packages/TestItemRunner/ax5HJ/src/TestItemRunner.jl:230 [18] run_tests(path::String) @ TestItemRunner ~/.julia/packages/TestItemRunner/ax5HJ/src/TestItemRunner.jl:134 [19] top-level scope @ ~/.julia/packages/PythonCall/83z4q/test/runtests.jl:11 [20] include(fname::String) @ Main ./sysimg.jl:38 [21] top-level scope @ none:6 Test Summary: | Pass Error Broken Total Time Package | 3399 3 2 3404 4m59.3s test/GC.jl | 2 2 1m07.2s test/C.jl | 8 8 0.2s test/Convert.jl | 132 132 32.5s test/Compat.jl | 52 2 54 16.9s gui | 17 2 19 8.5s fix_qt_plugin_path | 2 2 0.3s event_loop_on/off | 15 1 16 5.3s pyqt4 | 2 2 0.8s pyqt5 | 2 2 0.0s pyside | 2 2 0.0s pyside2 | 2 2 0.0s pyside6 | 1 1 2 4.6s gtk | 2 2 0.0s gtk3 | 2 2 0.0s wx | 2 2 0.0s matplotlib issue 676 | 1 1 1.2s ipython | 2 2 0.2s multimedia | 0 0.0s PyCall.jl | 0 2.3s Serialization.jl | 27 27 4.5s Tables.jl | 6 6 1.2s test/GIL.jl | 0 8.6s test/NumpyDates.jl | 1755 1755 24.7s test/JlWrap.jl | 227 1 2 230 17.4s any | 53 2 55 5.9s array | 76 1 77 5.3s type | 2 2 0.2s bool | 5 5 0.2s ndim | 4 4 0.2s shape | 4 4 0.1s getitem | 22 22 1.7s setitem | 7 7 0.6s delitem | 4 4 0.4s reshape | 3 3 0.4s copy | 6 6 0.0s __array__ | 1 1 0.2s array_interface | 7 7 0.4s array_struct | 0 0.0s buffer | 12 12 0.7s base | 0 0.0s callback | 0 0.0s dict | 3 3 0.1s io | 5 5 0.1s iter | 1 1 0.4s module | 4 4 0.5s number | 15 15 0.4s objectarray | 0 0.0s raw | 0 0.0s set | 3 3 0.1s type | 2 2 0.1s vector | 65 65 4.5s test/Aqua.jl | 11 11 1m24.7s test/Core.jl | 720 720 22.7s test/PyMacro.jl | 113 113 9.9s test/Utils.jl | 24 24 1.7s test/Wrap.jl | 355 355 12.7s ERROR: LoadError: Some tests did not pass: 3399 passed, 0 failed, 3 errored, 2 broken. in expression starting at /home/pkgeval/.julia/packages/PythonCall/83z4q/test/runtests.jl:11 Testing failed after 335.16s ERROR: LoadError: Package PythonCall errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2128 [3] test @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2011 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:481 [5] test(pkgs::Vector{Pkg.Types.PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:159 [6] test @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:147 [inlined] [7] #test#74 @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:146 [inlined] [8] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:223 in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 PkgEval failed after 526.07s: package tests unexpectedly errored