Package evaluation to test DiffEqParamEstim on Julia 1.11.8 (29b3528cce*) started at 2026-01-20T13:09:15.565


################################################################################
# Set-up
#

Installing PkgEval dependencies (TestEnv)...
  Activating project at `~/.julia/environments/v1.11`

Set-up completed after 7.84s


################################################################################
# Installation
#

Installing DiffEqParamEstim...
   Resolving package versions...
    Updating `~/.julia/environments/v1.11/Project.toml`
  [1130ab10] + DiffEqParamEstim v2.2.0
    Updating `~/.julia/environments/v1.11/Manifest.toml`
  [47edcb42] + ADTypes v1.21.0
  [7d9f7c33] + Accessors v0.1.43
  [79e6a3ab] + Adapt v4.4.0
  [66dad0bd] + AliasTables v1.1.3
  [4fba245c] + ArrayInterface v7.22.0
  [62783981] + BitTwiddlingConvenienceFunctions v0.1.6
  [70df07ce] + BracketingNonlinearSolve v1.6.2
  [2a0fbf3d] + CPUSummary v0.2.7
  [49dc2e85] + Calculus v0.5.2
  [fb6a15b2] + CloseOpenIntervals v0.1.13
  [38540f10] + CommonSolve v0.2.6
  [f70d9fcc] + CommonWorldInvalidations v1.0.0
  [34da2185] + Compat v4.18.1
  [a33af91c] + CompositionsBase v0.1.2
  [2569d6c7] + ConcreteStructs v0.2.3
  [187b0558] + ConstructionBase v1.6.0
  [adafc99b] + CpuId v0.3.1
  [9a962f9c] + DataAPI v1.16.0
  [864edb3b] + DataStructures v0.19.3
  [39dd38d3] + Dierckx v0.5.4
  [2b5f629d] + DiffEqBase v6.199.0
  [1130ab10] + DiffEqParamEstim v2.2.0
  [a0c0ee7d] + DifferentiationInterface v0.7.14
  [31c24e10] + Distributions v0.25.123
  [ffbed154] + DocStringExtensions v0.9.5
  [4e289a0a] + EnumX v1.0.5
  [f151be2c] + EnzymeCore v0.8.18
  [e2ba6199] + ExprTools v0.1.10
  [55351af7] + ExproniconLite v0.10.14
  [7034ab61] + FastBroadcast v0.3.5
  [9aa1b823] + FastClosures v0.3.2
  [a4df4552] + FastPower v1.3.0
  [1a297f60] + FillArrays v1.16.0
  [069b7b12] + FunctionWrappers v1.1.3
  [77dc65aa] + FunctionWrappersWrappers v0.1.3
  [46192b85] + GPUArraysCore v0.2.0
  [34004b35] + HypergeometricFunctions v0.3.28
  [615f187c] + IfElse v0.1.1
  [3587e190] + InverseFunctions v0.1.17
  [92d709cd] + IrrationalConstants v0.2.6
  [82899510] + IteratorInterfaceExtensions v1.0.0
  [692b3bcd] + JLLWrappers v1.7.1
  [ae98c720] + Jieko v0.2.1
  [10f19ff3] + LayoutPointers v0.1.17
  [2ab3a3ac] + LogExpFunctions v0.3.29
  [e6f89c97] + LoggingExtras v1.2.0
  [1914dd2f] + MacroTools v0.5.16
  [d125e4d3] + ManualMemory v0.1.8
  [bb5d69b7] + MaybeInplace v0.1.4
  [e1d29d7a] + Missings v1.2.0
  [2e0e35c7] + Moshi v0.3.7
  [46d2c3a1] + MuladdMacro v0.2.4
  [be0214bd] + NonlinearSolveBase v2.9.2
  [bac558e1] + OrderedCollections v1.8.1
  [90014a1f] + PDMats v0.11.37
  [06bb1623] + PenaltyFunctions v0.3.0
  [f517fe37] + Polyester v0.7.18
  [1d0040c9] + PolyesterWeave v0.2.2
⌅ [d236fae5] + PreallocationTools v0.4.34
⌅ [aea7be01] + PrecompileTools v1.2.1
  [21216c6a] + Preferences v1.5.1
  [43287f4e] + PtrArrays v1.3.0
  [1fd47b50] + QuadGK v2.11.2
  [3cdcf5f2] + RecipesBase v1.3.4
  [731186ca] + RecursiveArrayTools v3.44.0
  [189a3867] + Reexport v1.2.2
  [ae029012] + Requires v1.3.1
  [79098fc4] + Rmath v0.9.0
  [7e49a35a] + RuntimeGeneratedFunctions v0.5.16
  [94e857df] + SIMDTypes v0.1.0
  [0bca4576] + SciMLBase v2.134.0
  [19f34311] + SciMLJacobianOperators v0.1.12
  [a6db7da4] + SciMLLogging v1.8.0
  [c0aeaf25] + SciMLOperators v1.14.1
  [431bcebd] + SciMLPublic v1.0.1
  [53ae85a6] + SciMLStructures v1.10.0
  [efcf1570] + Setfield v1.1.2
  [a2af1166] + SortingAlgorithms v1.2.2
  [276daf66] + SpecialFunctions v2.6.1
  [aedffcd0] + Static v1.3.1
  [0d7ed370] + StaticArrayInterface v1.8.0
  [1e83bf80] + StaticArraysCore v1.4.4
  [10745b16] + Statistics v1.11.1
  [82ae8749] + StatsAPI v1.8.0
  [2913bbd2] + StatsBase v0.34.10
  [4c63d2b9] + StatsFuns v1.5.2
  [7792a7ef] + StrideArraysCore v0.5.8
  [2efcf032] + SymbolicIndexingInterface v0.3.46
  [8290d209] + ThreadingUtilities v0.5.5
  [a759f4b9] + TimerOutputs v0.5.29
  [781d530d] + TruncatedStacktraces v1.4.0
  [cd4c43a9] + Dierckx_jll v0.2.0+0
  [efe28fd5] + OpenSpecFun_jll v0.5.6+0
  [f50d1b31] + Rmath_jll v0.5.1+0
  [56f22d72] + Artifacts v1.11.0
  [2a0f44e3] + Base64 v1.11.0
  [ade2ca70] + Dates v1.11.0
  [8ba89e20] + Distributed v1.11.0
  [9fa8497b] + Future v1.11.0
  [b77e0a4c] + InteractiveUtils v1.11.0
  [8f399da3] + Libdl v1.11.0
  [37e2e46d] + LinearAlgebra v1.11.0
  [56ddb016] + Logging v1.11.0
  [d6f4376e] + Markdown v1.11.0
  [de0858da] + Printf v1.11.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v0.7.0
  [9e88b42a] + Serialization v1.11.0
  [6462fe0b] + Sockets v1.11.0
  [2f01184e] + SparseArrays v1.11.0
  [4607b0f0] + SuiteSparse
  [fa267f1f] + TOML v1.0.3
  [cf7118a7] + UUIDs v1.11.0
  [4ec0a83e] + Unicode v1.11.0
  [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0
  [4536629a] + OpenBLAS_jll v0.3.27+1
  [05823500] + OpenLibm_jll v0.8.5+0
  [bea87d4a] + SuiteSparse_jll v7.7.0+0
  [8e850b90] + libblastrampoline_jll v5.11.0+0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`

Installation completed after 6.08s


################################################################################
# Precompilation
#

Precompiling PkgEval dependencies...

Precompiling package dependencies...
Precompiling project...
  21619.1 ms  ✓ OptimizationBase
   3924.9 ms  ✓ DifferentiationInterface → DifferentiationInterfaceTrackerExt
  37524.3 ms  ✓ RecursiveArrayTools → RecursiveArrayToolsTrackerExt
  62486.6 ms  ✓ SciMLBase → SciMLBaseTrackerExt
  50146.6 ms  ✓ NonlinearSolveBase → NonlinearSolveBaseTrackerExt
  48751.5 ms  ✓ Zygote → ZygoteTrackerExt
 120861.5 ms  ✓ SimpleNonlinearSolve → SimpleNonlinearSolveReverseDiffExt
  38796.7 ms  ✓ SimpleNonlinearSolve → SimpleNonlinearSolveTrackerExt
  40128.7 ms  ✓ Symbolics → SymbolicsPreallocationToolsExt
  84372.2 ms  ✓ RecursiveArrayTools → RecursiveArrayToolsReverseDiffExt
  43226.3 ms  ✓ SciMLBase → SciMLBaseReverseDiffExt
   9156.0 ms  ✓ NonlinearSolveBase → NonlinearSolveBaseReverseDiffExt
  84161.3 ms  ✓ LineSearch → LineSearchLineSearchesExt
  27047.9 ms  ✓ DiffEqBase → DiffEqBaseTrackerExt
  14392.4 ms  ✓ DiffEqBase → DiffEqBaseReverseDiffExt
  11416.3 ms  ✓ DiffEqParamEstim
  17991.5 ms  ✓ JumpProcesses → JumpProcessesKernelAbstractionsExt
 133185.3 ms  ✓ ImplicitDiscreteSolve
 189240.5 ms  ✓ NonlinearSolve → NonlinearSolveSundialsExt
  42057.0 ms  ✓ DiffEqNoiseProcess → DiffEqNoiseProcessOptimExt
  51843.5 ms  ✓ DiffEqNoiseProcess → DiffEqNoiseProcessReverseDiffExt
 112700.1 ms  ✓ OptimizationBase → OptimizationZygoteExt
   9027.3 ms  ✓ OptimizationBase → OptimizationReverseDiffExt
 157609.0 ms  ✓ OptimizationBase → OptimizationEnzymeExt
   4680.3 ms  ✓ Optimization
   5059.9 ms  ✓ OptimizationNLopt
  42873.8 ms  ✓ OptimizationBBO
 102041.7 ms  ✓ OptimizationOptimJL
 817913.9 ms  ✓ ModelingToolkitBase

======================================================================================
Information request received. A stacktrace will print followed by a 1.0 second profile
======================================================================================

cmd: /opt/julia/bin/julia 7 running 0 of 1

signal (10): User defined signal 1
epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line)
uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404
uv_run at /workspace/srcdir/libuv/src/unix/core.c:430
ijl_task_get_next at /source/src/scheduler.c:522
poptask at ./task.jl:1012
wait at ./task.jl:1021
#wait#733 at ./condition.jl:130
wait at ./condition.jl:125 [inlined]
_trywait at ./asyncevent.jl:145
#818 at ./asyncevent.jl:311
jfptr_YY.818_67287.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:2951 [inlined]
ijl_apply_generic at /source/src/gf.c:3128
jl_apply at /source/src/julia.h:2157 [inlined]
start_task at /source/src/task.c:1204
unknown function (ip: (nil))

==============================================================
Profile collected. A report will print at the next yield point
==============================================================

┌ Warning: There were no samples collected in one or more groups.
│ This may be due to idle threads, or you may need to run your
│ program longer (perhaps by running it multiple times),
│ or adjust the delay between samples with `Profile.init()`.
└ @ Profile /opt/julia/share/julia/stdlib/v1.11/Profile/src/Profile.jl:1240
Overhead ╎ [+additional indent] Count File:Line; Function
=========================================================
Thread 1 Task 0x00007e0346b67210 Total snapshots: 264. Utilization: 0%
   ╎264 @Base/asyncevent.jl:311; (::Base.var"#818#819"{FileWatching.Pidfile.var…
   ╎ 264 @Base/asyncevent.jl:145; _trywait(t::Timer)
   ╎  264 @Base/condition.jl:125; wait
   ╎   264 @Base/condition.jl:130; wait(c::Base.GenericCondition{Base.Threads.S…
   ╎    264 @Base/task.jl:1021; wait()
263╎     264 @Base/task.jl:1012; poptask(W::Base.IntrusiveLinkedListSynchronize…


======================================================================================
Information request received. A stacktrace will print followed by a 1.0 second profile
======================================================================================

cmd: /opt/julia/bin/julia 1 running 0 of 1

signal (10): User defined signal 1
epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line)
uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404
uv_run at /workspace/srcdir/libuv/src/unix/core.c:430
ijl_task_get_next at /source/src/scheduler.c:522
poptask at ./task.jl:1012
wait at ./task.jl:1021
task_done_hook at ./task.jl:694
jfptr_task_done_hook_66687.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:2951 [inlined]
ijl_apply_generic at /source/src/gf.c:3128
jl_apply at /source/src/julia.h:2157 [inlined]
jl_finish_task at /source/src/task.c:315
start_task at /source/src/task.c:1215
unknown function (ip: (nil))

==============================================================
Profile collected. A report will print at the next yield point
==============================================================

┌ Warning: There were no samples collected in one or more groups.
│ This may be due to idle threads, or you may need to run your
│ program longer (perhaps by running it multiple times),
│ or adjust the delay between samples with `Profile.init()`.
└ @ Profile /opt/julia/share/julia/stdlib/v1.11/Profile/src/Profile.jl:1240
Overhead ╎ [+additional indent] Count File:Line; Function
=========================================================
Thread 1 Task 0x0000720fa592cb00 Total snapshots: 337. Utilization: 0%
   ╎337 @Base/task.jl:694; task_done_hook(t::Task)
   ╎ 337 @Base/task.jl:1021; wait()
336╎  337 @Base/task.jl:1012; poptask(W::Base.IntrusiveLinkedListSynchronized{T…


[7] signal 15: Terminated
in expression starting at /PkgEval.jl/scripts/precompile.jl:34
epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line)
uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404
uv_run at /workspace/srcdir/libuv/src/unix/core.c:430
ijl_task_get_next at /source/src/scheduler.c:522

[1] signal 15: Terminated
in expression starting at /PkgEval.jl/scripts/evaluate.jl:156
epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line)
uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404
uv_run at /workspace/srcdir/libuv/src/unix/core.c:430
ijl_task_get_next at /source/src/scheduler.c:522
poptask at ./task.jl:1012
poptask at ./task.jl:1012
wait at ./task.jl:1021
wait at ./task.jl:1021
#wait#733 at ./condition.jl:130
#wait#733 at ./condition.jl:130
wait at ./condition.jl:125 [inlined]
_trywait at ./asyncevent.jl:145
wait at ./condition.jl:125 [inlined]
_trywait at ./asyncevent.jl:145
#818 at ./asyncevent.jl:311
profile_printing_listener at ./Base.jl:582
jfptr_YY.818_67287.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:2951 [inlined]
ijl_apply_generic at /source/src/gf.c:3128
jl_apply at /source/src/julia.h:2157 [inlined]
start_task at /source/src/task.c:1204
unknown function (ip: (nil))
Allocations: 67674959 (Pool: 67673035; Big: 1924); GC: 62
#1192 at ./Base.jl:622
val already in a list
atexit hook threw an error: ErrorException("schedule: Task not runnable")
error at ./error.jl:35
jfptr_YY.1192_76260.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:2951 [inlined]
ijl_apply_generic at /source/src/gf.c:3128
jl_apply at /source/src/julia.h:2157 [inlined]
start_task at /source/src/task.c:1204
unknown function (ip: (nil))
Allocations: 14113375 (Pool: 14112632; Big: 743); GC: 14
#schedule#763 at ./task.jl:884
val already in a list
atexit hook threw an error: ErrorException("schedule: Task not runnable")
error at ./error.jl:35
schedule at ./task.jl:876 [inlined]
uv_writecb_task at ./stream.jl:1200
#schedule#763 at ./task.jl:884
jfptr_uv_writecb_task_67137.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:2951 [inlined]
ijl_apply_generic at /source/src/gf.c:3128
schedule at ./task.jl:876 [inlined]
uv_writecb_task at ./stream.jl:1200
jlcapi_uv_writecb_task_67601.1 at /opt/julia/lib/julia/sys.so (unknown line)
uv__write_callbacks at /workspace/srcdir/libuv/src/unix/stream.c:926
uv__stream_io at /workspace/srcdir/libuv/src/unix/stream.c:1227
uv__run_pending at /workspace/srcdir/libuv/src/unix/core.c:824
uv_run at /workspace/srcdir/libuv/src/unix/core.c:420
ijl_task_get_next at /source/src/scheduler.c:522
jfptr_uv_writecb_task_67137.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:2951 [inlined]
ijl_apply_generic at /source/src/gf.c:3128
poptask at ./task.jl:1012
jlcapi_uv_writecb_task_67601.1 at /opt/julia/lib/julia/sys.so (unknown line)
uv__write_callbacks at /workspace/srcdir/libuv/src/unix/stream.c:926
uv__stream_io at /workspace/srcdir/libuv/src/unix/stream.c:1227
wait at ./task.jl:1021
uv__run_pending at /workspace/srcdir/libuv/src/unix/core.c:824
uv_run at /workspace/srcdir/libuv/src/unix/core.c:420
ijl_task_get_next at /source/src/scheduler.c:522
uv_write at ./stream.jl:1081
poptask at ./task.jl:1012
unsafe_write at ./stream.jl:1154
wait at ./task.jl:1021
write at ./strings/io.jl:248 [inlined]
print at ./strings/io.jl:250
uv_write at ./stream.jl:1081
jfptr_print_48487.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:2951 [inlined]
ijl_apply_generic at /source/src/gf.c:3128
showerror at ./errorshow.jl:152
unknown function (ip: 0x7e0380347116)
_jl_invoke at /source/src/gf.c:2951 [inlined]
ijl_apply_generic at /source/src/gf.c:3128
unsafe_write at ./stream.jl:1154
write at ./strings/io.jl:248 [inlined]
print at ./strings/io.jl:250
_atexit at ./initdefs.jl:454
jfptr_print_48487.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:2951 [inlined]
ijl_apply_generic at /source/src/gf.c:3128
showerror at ./errorshow.jl:152
unknown function (ip: 0x720fad756ed6)
_jl_invoke at /source/src/gf.c:2951 [inlined]
ijl_apply_generic at /source/src/gf.c:3128
jfptr__atexit_69645.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:2951 [inlined]
ijl_apply_generic at /source/src/gf.c:3128
jl_apply at /source/src/julia.h:2157 [inlined]
ijl_atexit_hook at /source/src/init.c:271
jl_exit_thread0_cb at /source/src/signals-unix.c:517
_atexit at ./initdefs.jl:454
jfptr__atexit_69645.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:2951 [inlined]
ijl_apply_generic at /source/src/gf.c:3128
jl_apply at /source/src/julia.h:2157 [inlined]
ijl_atexit_hook at /source/src/init.c:271
jl_exit_thread0_cb at /source/src/signals-unix.c:517

PkgEval terminated after 2751.63s: test duration exceeded the time limit