Package evaluation to test BioMASS on Julia 1.11.8 (29b3528cce*) started at 2026-01-20T18:59:09.438 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.11` Set-up completed after 11.55s ################################################################################ # Installation # Installing BioMASS... Resolving package versions... Installed SciMLPublic ───────────────────────── v1.0.1 Installed OrdinaryDiffEqRosenbrock ──────────── v1.21.0 Installed LoggingExtras ─────────────────────── v1.2.0 Installed OrdinaryDiffEqRKN ─────────────────── v1.8.0 Installed Accessors ─────────────────────────── v0.1.43 Installed Preferences ───────────────────────── v1.5.1 Installed OrdinaryDiffEqStabilizedRK ────────── v1.7.0 Installed SciMLJacobianOperators ────────────── v0.1.12 Installed SciMLLogging ──────────────────────── v1.8.0 Installed OrdinaryDiffEqSDIRK ───────────────── v1.10.0 Installed InlineStrings ─────────────────────── v1.4.5 Installed FastGaussQuadrature ───────────────── v1.1.0 Installed TimerOutputs ──────────────────────── v0.5.29 Installed StaticArrays ──────────────────────── v1.9.16 Installed Polyester ─────────────────────────── v0.7.18 Installed NonlinearSolve ────────────────────── v4.12.0 Installed OrdinaryDiffEqPRK ─────────────────── v1.7.0 Installed EnumX ─────────────────────────────── v1.0.5 Installed MaybeInplace ──────────────────────── v0.1.4 Installed Sundials_jll ──────────────────────── v5.2.3+0 Installed RecursiveArrayTools ───────────────── v3.44.0 Installed OrdinaryDiffEqCore ────────────────── v2.3.0 Installed CEnum ─────────────────────────────── v0.5.0 Installed InvertedIndices ───────────────────── v1.3.1 Installed DelimitedFiles ────────────────────── v1.9.1 Installed FunctionWrappers ──────────────────── v1.1.3 Installed Statistics ────────────────────────── v1.11.1 Installed OrdinaryDiffEqAdamsBashforthMoulton ─ v1.8.0 Installed IntelOpenMP_jll ───────────────────── v2025.2.0+0 Installed OrdinaryDiffEqSSPRK ───────────────── v1.10.0 Installed Static ────────────────────────────── v1.3.1 Installed Missings ──────────────────────────── v1.2.0 Installed Distances ─────────────────────────── v0.10.12 Installed OrdinaryDiffEqVerner ──────────────── v1.9.0 Installed DataFrames ────────────────────────── v1.8.1 Installed FiniteDiff ────────────────────────── v2.29.0 Installed IrrationalConstants ───────────────── v0.2.6 Installed SIMDTypes ─────────────────────────── v0.1.0 Installed MuladdMacro ───────────────────────── v0.2.4 Installed SteadyStateDiffEq ─────────────────── v1.16.1 Installed FastPower ─────────────────────────── v1.3.0 Installed Functors ──────────────────────────── v0.4.12 Installed DiffEqBase ────────────────────────── v6.199.0 Installed OrdinaryDiffEqFIRK ────────────────── v1.19.0 Installed CpuId ─────────────────────────────── v0.3.1 Installed NonlinearSolveQuasiNewton ─────────── v1.12.0 Installed SciMLBase ─────────────────────────── v2.134.0 Installed NLsolve ───────────────────────────── v4.5.1 Installed JSON ──────────────────────────────── v1.4.0 Installed OrdinaryDiffEqNonlinearSolve ──────── v1.18.1 Installed SentinelArrays ────────────────────── v1.4.9 Installed BracketingNonlinearSolve ──────────── v1.6.2 Installed ADTypes ───────────────────────────── v1.21.0 Installed SimpleNonlinearSolve ──────────────── v2.10.0 Installed SpecialFunctions ──────────────────── v2.6.1 Installed LinearSolve ───────────────────────── v3.57.0 Installed IfElse ────────────────────────────── v0.1.1 Installed NonlinearSolveSpectralMethods ─────── v1.6.0 Installed NaNMath ───────────────────────────── v1.1.3 Installed StaticArraysCore ──────────────────── v1.4.4 Installed LineSearch ────────────────────────── v0.1.6 Installed ThreadingUtilities ────────────────── v0.5.5 Installed PyPlot ────────────────────────────── v2.11.6 Installed WorkerUtilities ───────────────────── v1.6.1 Installed ManualMemory ──────────────────────── v0.1.8 Installed SparseMatrixColorings ─────────────── v0.4.23 Installed WeakRefStrings ────────────────────── v1.4.2 Installed TranscodingStreams ────────────────── v0.11.3 Installed NLSolversBase ─────────────────────── v7.10.0 Installed Colors ────────────────────────────── v0.13.1 Installed CommonSubexpressions ──────────────── v0.3.1 Installed CommonWorldInvalidations ──────────── v1.0.0 Installed Compat ────────────────────────────── v4.18.1 Installed ExprTools ─────────────────────────── v0.1.10 Installed StatsAPI ──────────────────────────── v1.8.0 Installed DataStructures ────────────────────── v0.18.22 Installed OrdinaryDiffEq ────────────────────── v6.105.0 Installed CodecZlib ─────────────────────────── v0.7.8 Installed OrdinaryDiffEqLinear ──────────────── v1.9.0 Installed StaticArrayInterface ──────────────── v1.8.0 Installed SciMLStructures ───────────────────── v1.10.0 Installed BitTwiddlingConvenienceFunctions ──── v0.1.6 Installed ColorTypes ────────────────────────── v0.12.1 Installed StatsBase ─────────────────────────── v0.33.21 Installed DiffRules ─────────────────────────── v1.15.1 Installed oneTBB_jll ────────────────────────── v2022.0.0+1 Installed OrdinaryDiffEqExplicitRK ──────────── v1.7.0 Installed FunctionWrappersWrappers ──────────── v0.1.3 Installed GenericSchur ──────────────────────── v0.5.6 Installed OrdinaryDiffEqPDIRK ───────────────── v1.9.0 Installed LayoutPointers ────────────────────── v0.1.17 Installed Conda ─────────────────────────────── v1.10.3 Installed TableTraits ───────────────────────── v1.0.1 Installed Sundials ──────────────────────────── v4.28.0 Installed OrdinaryDiffEqQPRK ────────────────── v1.7.0 Installed PrettyTables ──────────────────────── v3.1.2 Installed DiffResults ───────────────────────── v1.1.0 Installed OrdinaryDiffEqFunctionMap ─────────── v1.8.0 Installed BioMASS ───────────────────────────── v0.8.2 Installed SciMLOperators ────────────────────── v1.14.1 Installed Parsers ───────────────────────────── v2.8.3 Installed PyCall ────────────────────────────── v1.96.4 Installed OrdinaryDiffEqLowOrderRK ──────────── v1.9.0 Installed DiffEqCallbacks ───────────────────── v2.37.0 Installed NonlinearSolveBase ────────────────── v2.9.2 Installed Setfield ──────────────────────────── v1.1.2 Installed PooledArrays ──────────────────────── v1.4.3 Installed JLLWrappers ───────────────────────── v1.7.1 Installed MKL_jll ───────────────────────────── v2025.2.0+0 Installed ExproniconLite ────────────────────── v0.10.14 Installed ConstructionBase ──────────────────── v1.6.0 Installed EnzymeCore ────────────────────────── v0.8.18 Installed DataValueInterfaces ───────────────── v1.0.0 Installed OrderedCollections ────────────────── v1.8.1 Installed NonlinearSolveFirstOrder ──────────── v1.11.0 Installed ChainRulesCore ────────────────────── v1.26.0 Installed FastClosures ──────────────────────── v0.3.2 Installed OrdinaryDiffEqExponentialRK ───────── v1.11.0 Installed DelayDiffEq ───────────────────────── v5.64.0 Installed PolyesterWeave ────────────────────── v0.2.2 Installed ArrayInterface ────────────────────── v7.22.0 Installed Reexport ──────────────────────────── v1.2.2 Installed LineSearches ──────────────────────── v7.5.1 Installed CSV ───────────────────────────────── v0.10.15 Installed OrdinaryDiffEqTsit5 ───────────────── v1.8.0 Installed LogExpFunctions ───────────────────── v0.3.29 Installed OrdinaryDiffEqExtrapolation ───────── v1.12.0 Installed PreallocationTools ────────────────── v0.4.34 Installed CloseOpenIntervals ────────────────── v0.1.13 Installed OpenSpecFun_jll ───────────────────── v0.5.6+0 Installed CompositionsBase ──────────────────── v0.1.2 Installed MacroTools ────────────────────────── v0.5.16 Installed UnPack ────────────────────────────── v1.0.2 Installed OrdinaryDiffEqLowStorageRK ────────── v1.10.0 Installed InverseFunctions ──────────────────── v0.1.17 Installed CommonSolve ───────────────────────── v0.2.6 Installed GPUArraysCore ─────────────────────── v0.2.0 Installed OrdinaryDiffEqStabilizedIRK ───────── v1.9.0 Installed DocStringExtensions ───────────────── v0.9.5 Installed ExponentialUtilities ──────────────── v1.30.0 Installed Crayons ───────────────────────────── v4.1.1 Installed Adapt ─────────────────────────────── v4.4.0 Installed OrdinaryDiffEqBDF ─────────────────── v1.13.0 Installed StrideArraysCore ──────────────────── v0.5.8 Installed DifferentiationInterface ──────────── v0.7.14 Installed OrdinaryDiffEqDifferentiation ─────── v1.21.0 Installed OrdinaryDiffEqHighOrderRK ─────────── v1.8.0 Installed RuntimeGeneratedFunctions ─────────── v0.5.16 Installed Krylov ────────────────────────────── v0.10.3 Installed Jieko ─────────────────────────────── v0.2.1 Installed OrdinaryDiffEqFeagin ──────────────── v1.7.0 Installed CPUSummary ────────────────────────── v0.2.7 Installed DataAPI ───────────────────────────── v1.16.0 Installed FixedPointNumbers ─────────────────── v0.8.5 Installed ConcreteStructs ───────────────────── v0.2.3 Installed Tables ────────────────────────────── v1.12.1 Installed RecipesBase ───────────────────────── v1.3.4 Installed TruncatedStacktraces ──────────────── v1.4.0 Installed Moshi ─────────────────────────────── v0.3.7 Installed LaTeXStrings ──────────────────────── v1.4.0 Installed VersionParsing ────────────────────── v1.3.0 Installed FilePathsBase ─────────────────────── v0.9.24 Installed IteratorInterfaceExtensions ───────── v1.0.0 Installed SymbolicIndexingInterface ─────────── v0.3.46 Installed PrecompileTools ───────────────────── v1.2.1 Installed FillArrays ────────────────────────── v1.16.0 Installed ForwardDiff ───────────────────────── v0.10.39 Installed Requires ──────────────────────────── v1.3.1 Installed OrdinaryDiffEqDefault ─────────────── v1.11.0 Installed OrdinaryDiffEqSymplecticRK ────────── v1.10.0 Installed OrdinaryDiffEqNordsieck ───────────── v1.7.0 Installed StringManipulation ────────────────── v0.4.2 Installed FastBroadcast ─────────────────────── v0.3.5 Installed Parameters ────────────────────────── v0.12.3 Installed OrdinaryDiffEqIMEXMultistep ───────── v1.10.0 Installed SortingAlgorithms ─────────────────── v1.2.2 Installed StructUtils ───────────────────────── v2.6.2 Updating `~/.julia/environments/v1.11/Project.toml` [324734c7] + BioMASS v0.8.2 Updating `~/.julia/environments/v1.11/Manifest.toml` [47edcb42] + ADTypes v1.21.0 [7d9f7c33] + Accessors v0.1.43 [79e6a3ab] + Adapt v4.4.0 [4fba245c] + ArrayInterface v7.22.0 [324734c7] + BioMASS v0.8.2 [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 [70df07ce] + BracketingNonlinearSolve v1.6.2 [fa961155] + CEnum v0.5.0 [2a0fbf3d] + CPUSummary v0.2.7 [336ed68f] + CSV v0.10.15 [d360d2e6] + ChainRulesCore v1.26.0 [fb6a15b2] + CloseOpenIntervals v0.1.13 [944b1d66] + CodecZlib v0.7.8 [3da002f7] + ColorTypes v0.12.1 [5ae59095] + Colors v0.13.1 [38540f10] + CommonSolve v0.2.6 [bbf7d656] + CommonSubexpressions v0.3.1 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.18.1 [a33af91c] + CompositionsBase v0.1.2 [2569d6c7] + ConcreteStructs v0.2.3 [8f4d0f93] + Conda v1.10.3 [187b0558] + ConstructionBase v1.6.0 [adafc99b] + CpuId v0.3.1 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.8.1 ⌅ [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 ⌃ [bcd4f6db] + DelayDiffEq v5.64.0 [8bb1440f] + DelimitedFiles v1.9.1 [2b5f629d] + DiffEqBase v6.199.0 ⌅ [459566f4] + DiffEqCallbacks v2.37.0 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [a0c0ee7d] + DifferentiationInterface v0.7.14 [b4f34e82] + Distances v0.10.12 [ffbed154] + DocStringExtensions v0.9.5 [4e289a0a] + EnumX v1.0.5 [f151be2c] + EnzymeCore v0.8.18 [d4d017d3] + ExponentialUtilities v1.30.0 [e2ba6199] + ExprTools v0.1.10 [55351af7] + ExproniconLite v0.10.14 [7034ab61] + FastBroadcast v0.3.5 [9aa1b823] + FastClosures v0.3.2 [442a2c76] + FastGaussQuadrature v1.1.0 [a4df4552] + FastPower v1.3.0 [48062228] + FilePathsBase v0.9.24 [1a297f60] + FillArrays v1.16.0 [6a86dc24] + FiniteDiff v2.29.0 [53c48c17] + FixedPointNumbers v0.8.5 ⌅ [f6369f11] + ForwardDiff v0.10.39 [069b7b12] + FunctionWrappers v1.1.3 [77dc65aa] + FunctionWrappersWrappers v0.1.3 ⌅ [d9f16b24] + Functors v0.4.12 [46192b85] + GPUArraysCore v0.2.0 [c145ed77] + GenericSchur v0.5.6 [615f187c] + IfElse v0.1.1 [842dd82b] + InlineStrings v1.4.5 [3587e190] + InverseFunctions v0.1.17 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.6 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 [682c06a0] + JSON v1.4.0 [ae98c720] + Jieko v0.2.1 [ba0b0d4f] + Krylov v0.10.3 [b964fa9f] + LaTeXStrings v1.4.0 [10f19ff3] + LayoutPointers v0.1.17 [87fe0de2] + LineSearch v0.1.6 ⌃ [d3d80556] + LineSearches v7.5.1 [7ed4a6bd] + LinearSolve v3.57.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [e6f89c97] + LoggingExtras v1.2.0 [1914dd2f] + MacroTools v0.5.16 [d125e4d3] + ManualMemory v0.1.8 [bb5d69b7] + MaybeInplace v0.1.4 [e1d29d7a] + Missings v1.2.0 [2e0e35c7] + Moshi v0.3.7 [46d2c3a1] + MuladdMacro v0.2.4 ⌅ [d41bc354] + NLSolversBase v7.10.0 [2774e3e8] + NLsolve v4.5.1 [77ba4419] + NaNMath v1.1.3 ⌃ [8913a72c] + NonlinearSolve v4.12.0 [be0214bd] + NonlinearSolveBase v2.9.2 [5959db7a] + NonlinearSolveFirstOrder v1.11.0 [9a2c21bd] + NonlinearSolveQuasiNewton v1.12.0 [26075421] + NonlinearSolveSpectralMethods v1.6.0 [bac558e1] + OrderedCollections v1.8.1 ⌃ [1dea7af3] + OrdinaryDiffEq v6.105.0 ⌃ [89bda076] + OrdinaryDiffEqAdamsBashforthMoulton v1.8.0 ⌃ [6ad6398a] + OrdinaryDiffEqBDF v1.13.0 ⌅ [bbf590c4] + OrdinaryDiffEqCore v2.3.0 ⌃ [50262376] + OrdinaryDiffEqDefault v1.11.0 ⌃ [4302a76b] + OrdinaryDiffEqDifferentiation v1.21.0 ⌃ [9286f039] + OrdinaryDiffEqExplicitRK v1.7.0 ⌃ [e0540318] + OrdinaryDiffEqExponentialRK v1.11.0 ⌃ [becaefa8] + OrdinaryDiffEqExtrapolation v1.12.0 ⌃ [5960d6e9] + OrdinaryDiffEqFIRK v1.19.0 ⌃ [101fe9f7] + OrdinaryDiffEqFeagin v1.7.0 ⌃ [d3585ca7] + OrdinaryDiffEqFunctionMap v1.8.0 ⌃ [d28bc4f8] + OrdinaryDiffEqHighOrderRK v1.8.0 ⌃ [9f002381] + OrdinaryDiffEqIMEXMultistep v1.10.0 ⌃ [521117fe] + OrdinaryDiffEqLinear v1.9.0 ⌃ [1344f307] + OrdinaryDiffEqLowOrderRK v1.9.0 ⌃ [b0944070] + OrdinaryDiffEqLowStorageRK v1.10.0 ⌃ [127b3ac7] + OrdinaryDiffEqNonlinearSolve v1.18.1 ⌃ [c9986a66] + OrdinaryDiffEqNordsieck v1.7.0 ⌃ [5dd0a6cf] + OrdinaryDiffEqPDIRK v1.9.0 ⌃ [5b33eab2] + OrdinaryDiffEqPRK v1.7.0 ⌃ [04162be5] + OrdinaryDiffEqQPRK v1.7.0 ⌃ [af6ede74] + OrdinaryDiffEqRKN v1.8.0 ⌃ [43230ef6] + OrdinaryDiffEqRosenbrock v1.21.0 ⌃ [2d112036] + OrdinaryDiffEqSDIRK v1.10.0 ⌃ [669c94d9] + OrdinaryDiffEqSSPRK v1.10.0 ⌃ [e3e12d00] + OrdinaryDiffEqStabilizedIRK v1.9.0 ⌃ [358294b1] + OrdinaryDiffEqStabilizedRK v1.7.0 ⌃ [fa646aed] + OrdinaryDiffEqSymplecticRK v1.10.0 ⌃ [b1df2697] + OrdinaryDiffEqTsit5 v1.8.0 ⌃ [79d7bb75] + OrdinaryDiffEqVerner v1.9.0 [d96e819e] + Parameters v0.12.3 [69de0a69] + Parsers v2.8.3 [f517fe37] + Polyester v0.7.18 [1d0040c9] + PolyesterWeave v0.2.2 [2dfb63ee] + PooledArrays v1.4.3 ⌅ [d236fae5] + PreallocationTools v0.4.34 ⌅ [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.5.1 [08abe8d2] + PrettyTables v3.1.2 [438e738f] + PyCall v1.96.4 [d330b81b] + PyPlot v2.11.6 [3cdcf5f2] + RecipesBase v1.3.4 [731186ca] + RecursiveArrayTools v3.44.0 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [7e49a35a] + RuntimeGeneratedFunctions v0.5.16 [94e857df] + SIMDTypes v0.1.0 [0bca4576] + SciMLBase v2.134.0 [19f34311] + SciMLJacobianOperators v0.1.12 [a6db7da4] + SciMLLogging v1.8.0 [c0aeaf25] + SciMLOperators v1.14.1 [431bcebd] + SciMLPublic v1.0.1 [53ae85a6] + SciMLStructures v1.10.0 [91c51154] + SentinelArrays v1.4.9 [efcf1570] + Setfield v1.1.2 [727e6d20] + SimpleNonlinearSolve v2.10.0 [a2af1166] + SortingAlgorithms v1.2.2 [0a514795] + SparseMatrixColorings v0.4.23 [276daf66] + SpecialFunctions v2.6.1 [aedffcd0] + Static v1.3.1 [0d7ed370] + StaticArrayInterface v1.8.0 [90137ffa] + StaticArrays v1.9.16 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 ⌅ [2913bbd2] + StatsBase v0.33.21 ⌅ [9672c7b4] + SteadyStateDiffEq v1.16.1 [7792a7ef] + StrideArraysCore v0.5.8 [892a3eda] + StringManipulation v0.4.2 [ec057cc2] + StructUtils v2.6.2 ⌅ [c3572dad] + Sundials v4.28.0 [2efcf032] + SymbolicIndexingInterface v0.3.46 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [8290d209] + ThreadingUtilities v0.5.5 [a759f4b9] + TimerOutputs v0.5.29 [3bb67fe8] + TranscodingStreams v0.11.3 [781d530d] + TruncatedStacktraces v1.4.0 [3a884ed6] + UnPack v1.0.2 [81def892] + VersionParsing v1.3.0 [ea10d353] + WeakRefStrings v1.4.2 [76eceee3] + WorkerUtilities v1.6.1 [1d5cc7b8] + IntelOpenMP_jll v2025.2.0+0 [856f044c] + MKL_jll v2025.2.0+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 ⌅ [fb77eaff] + Sundials_jll v5.2.3+0 [1317d2d5] + oneTBB_jll v2022.0.0+1 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.6.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.11.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.2.0 [44cfe95a] + Pkg v1.11.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.11.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] + LibCURL_jll v8.6.0+0 [e37daf67] + LibGit2_jll v1.7.2+0 [29816b5a] + LibSSH2_jll v1.11.0+1 [c8ffd9c3] + MbedTLS_jll v2.28.6+0 [14a3606d] + MozillaCACerts_jll v2023.12.12 [4536629a] + OpenBLAS_jll v0.3.27+1 [05823500] + OpenLibm_jll v0.8.5+0 [bea87d4a] + SuiteSparse_jll v7.7.0+0 [83775a58] + Zlib_jll v1.2.13+1 [8e850b90] + libblastrampoline_jll v5.11.0+0 [8e850ede] + nghttp2_jll v1.59.0+0 [3f19e933] + p7zip_jll v17.4.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Building Conda ─→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/8f06b0cfa4c514c7b9546756dbae91fcfbc92dc9/build.log` Building PyCall → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/9816a3826b0ebf49ab4926e2b18842ad8b5c8f04/build.log` Installation completed after 133.73s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling project... 3147.8 ms ✓ TestEnv 1 dependency successfully precompiled in 3 seconds. 23 already precompiled. Precompiling package dependencies... Precompiling project... 1182.8 ms ✓ FunctionWrappers 529.3 ms ✓ MuladdMacro 526.0 ms ✓ ConcreteStructs 581.3 ms ✓ LaTeXStrings 615.0 ms ✓ ExprTools 492.8 ms ✓ IteratorInterfaceExtensions 708.7 ms ✓ WorkerUtilities 675.3 ms ✓ StatsAPI 1132.2 ms ✓ ADTypes 659.1 ms ✓ VersionParsing 602.6 ms ✓ CEnum 3311.6 ms ✓ ExproniconLite 554.8 ms ✓ UnPack 1640.5 ms ✓ FillArrays 647.3 ms ✓ InverseFunctions 908.9 ms ✓ Statistics 518.3 ms ✓ CommonSolve 4202.4 ms ✓ MacroTools 627.2 ms ✓ ManualMemory 971.1 ms ✓ OrderedCollections 837.2 ms ✓ Requires 499.2 ms ✓ DataValueInterfaces 578.8 ms ✓ EnumX 506.2 ms ✓ Reexport 454.5 ms ✓ SIMDTypes 868.8 ms ✓ DocStringExtensions 1158.2 ms ✓ InlineStrings 1703.7 ms ✓ IrrationalConstants 567.3 ms ✓ CompositionsBase 966.2 ms ✓ TranscodingStreams 497.0 ms ✓ FastPower 772.4 ms ✓ NaNMath 799.7 ms ✓ DelimitedFiles 660.9 ms ✓ InvertedIndices 1109.6 ms ✓ EnzymeCore 505.8 ms ✓ IfElse 741.5 ms ✓ ConstructionBase 522.6 ms ✓ CommonWorldInvalidations 573.0 ms ✓ DataAPI 1861.3 ms ✓ Crayons 535.5 ms ✓ FastClosures 1288.9 ms ✓ Functors 602.8 ms ✓ SciMLPublic 668.7 ms ✓ StaticArraysCore 2085.0 ms ✓ GenericSchur 13268.8 ms ✓ Krylov 1737.3 ms ✓ SentinelArrays 1357.1 ms ✓ StructUtils 904.9 ms ✓ LoggingExtras 1163.0 ms ✓ CpuId 994.3 ms ✓ Preferences 955.5 ms ✓ Compat 623.4 ms ✓ FunctionWrappersWrappers 769.6 ms ✓ RuntimeGeneratedFunctions 2969.0 ms ✓ TimerOutputs 574.8 ms ✓ TableTraits 1694.7 ms ✓ DifferentiationInterface 3055.1 ms ✓ Jieko 1121.7 ms ✓ FillArrays → FillArraysSparseArraysExt 1065.0 ms ✓ InverseFunctions → InverseFunctionsTestExt 752.4 ms ✓ InverseFunctions → InverseFunctionsDatesExt 3642.8 ms ✓ FixedPointNumbers 1215.9 ms ✓ Distances 1049.7 ms ✓ Statistics → SparseArraysExt 707.6 ms ✓ FillArrays → FillArraysStatisticsExt 1404.8 ms ✓ CommonSubexpressions 1510.8 ms ✓ ThreadingUtilities 724.3 ms ✓ Parameters 730.2 ms ✓ Adapt 1143.8 ms ✓ LogExpFunctions 682.2 ms ✓ CompositionsBase → CompositionsBaseInverseFunctionsExt 766.5 ms ✓ CodecZlib 653.7 ms ✓ ADTypes → ADTypesEnzymeCoreExt 666.6 ms ✓ ConstructionBase → ConstructionBaseLinearAlgebraExt 657.5 ms ✓ ADTypes → ADTypesConstructionBaseExt 818.2 ms ✓ PooledArrays 775.4 ms ✓ Missings 671.3 ms ✓ DiffResults 884.4 ms ✓ JLLWrappers 758.0 ms ✓ PrecompileTools 1029.5 ms ✓ TruncatedStacktraces 1114.4 ms ✓ SciMLLogging 678.7 ms ✓ Compat → CompatLinearAlgebraExt 1312.7 ms ✓ Tables 1091.4 ms ✓ DifferentiationInterface → DifferentiationInterfaceSparseArraysExt 17613.8 ms ✓ Moshi 2795.4 ms ✓ ColorTypes 1066.8 ms ✓ Distances → DistancesSparseArraysExt 1032.5 ms ✓ Adapt → AdaptSparseArraysExt 913.3 ms ✓ ArrayInterface 829.9 ms ✓ GPUArraysCore 670.3 ms ✓ EnzymeCore → AdaptExt 681.2 ms ✓ LogExpFunctions → LogExpFunctionsInverseFunctionsExt 3077.9 ms ✓ Setfield 4926.7 ms ✓ Accessors 3293.5 ms ✓ IntelOpenMP_jll 3245.8 ms ✓ oneTBB_jll 1175.6 ms ✓ Sundials_jll 1120.2 ms ✓ OpenSpecFun_jll 12765.3 ms ✓ StaticArrays 3543.2 ms ✓ RecipesBase 3482.9 ms ✓ StringManipulation 19149.8 ms ✓ Parsers 14203.5 ms ✓ SparseMatrixColorings 1680.0 ms ✓ Static 3034.3 ms ✓ DataStructures 1504.8 ms ✓ FilePathsBase 2236.4 ms ✓ ChainRulesCore 716.3 ms ✓ StructUtils → StructUtilsTablesExt 1025.5 ms ✓ ColorTypes → StyledStringsExt 8447.8 ms ✓ Colors 1878.7 ms ✓ MaybeInplace 1005.5 ms ✓ ArrayInterface → ArrayInterfaceSparseArraysExt 626.5 ms ✓ ArrayInterface → ArrayInterfaceStaticArraysCoreExt 1266.7 ms ✓ SciMLStructures 1695.2 ms ✓ PreallocationTools 668.3 ms ✓ DifferentiationInterface → DifferentiationInterfaceGPUArraysCoreExt 651.3 ms ✓ ArrayInterface → ArrayInterfaceGPUArraysCoreExt 2096.8 ms ✓ Accessors → LinearAlgebraExt 1202.6 ms ✓ Accessors → TestExt 14546.5 ms ✓ MKL_jll 5065.2 ms ✓ SpecialFunctions 1211.4 ms ✓ StaticArrays → StaticArraysStatisticsExt 1261.5 ms ✓ FillArrays → FillArraysStaticArraysExt 1216.6 ms ✓ ConstructionBase → ConstructionBaseStaticArraysExt 1210.7 ms ✓ DifferentiationInterface → DifferentiationInterfaceStaticArraysExt 1168.6 ms ✓ Adapt → AdaptStaticArraysExt 1438.2 ms ✓ Accessors → StaticArraysExt 44676.5 ms ✓ PrettyTables 6572.0 ms ✓ JSON 937.5 ms ✓ InlineStrings → ParsersExt 1366.7 ms ✓ DifferentiationInterface → DifferentiationInterfaceSparseMatrixColoringsExt 706.1 ms ✓ BitTwiddlingConvenienceFunctions 1667.2 ms ✓ CPUSummary 2363.3 ms ✓ StaticArrayInterface 919.0 ms ✓ SortingAlgorithms 762.5 ms ✓ FilePathsBase → FilePathsBaseMmapExt 1880.3 ms ✓ FilePathsBase → FilePathsBaseTestExt 1049.6 ms ✓ ChainRulesCore → ChainRulesCoreSparseArraysExt 741.4 ms ✓ ADTypes → ADTypesChainRulesCoreExt 1106.5 ms ✓ EnzymeCore → EnzymeCoreChainRulesCoreExt 744.2 ms ✓ DifferentiationInterface → DifferentiationInterfaceChainRulesCoreExt 723.0 ms ✓ Distances → DistancesChainRulesCoreExt 2788.3 ms ✓ LogExpFunctions → LogExpFunctionsChainRulesCoreExt 686.0 ms ✓ ArrayInterface → ArrayInterfaceChainRulesCoreExt 1238.0 ms ✓ StaticArrays → StaticArraysChainRulesCoreExt 1854.0 ms ✓ SparseMatrixColorings → SparseMatrixColoringsColorsExt 976.1 ms ✓ MaybeInplace → MaybeInplaceSparseArraysExt 1014.5 ms ✓ FiniteDiff 82212.0 ms ✓ ExponentialUtilities 4433.2 ms ✓ SciMLOperators 3424.5 ms ✓ SymbolicIndexingInterface 4028.7 ms ✓ FastGaussQuadrature 3976.0 ms ✓ SpecialFunctions → SpecialFunctionsChainRulesCoreExt 1163.8 ms ✓ DiffRules 1936.1 ms ✓ Conda 1530.2 ms ✓ WeakRefStrings 1142.8 ms ✓ PolyesterWeave 1323.7 ms ✓ StaticArrayInterface → StaticArrayInterfaceStaticArraysExt 843.7 ms ✓ CloseOpenIntervals 1045.3 ms ✓ LayoutPointers 3636.4 ms ✓ StatsBase 82559.6 ms ✓ DataFrames 1835.9 ms ✓ FiniteDiff → FiniteDiffSparseArraysExt 1233.4 ms ✓ FiniteDiff → FiniteDiffStaticArraysExt 966.0 ms ✓ DifferentiationInterface → DifferentiationInterfaceFiniteDiffExt 3364.7 ms ✓ ExponentialUtilities → ExponentialUtilitiesStaticArraysExt 1036.8 ms ✓ SciMLOperators → SciMLOperatorsStaticArraysCoreExt 1447.9 ms ✓ SciMLOperators → SciMLOperatorsSparseArraysExt 2785.7 ms ✓ SymbolicIndexingInterface → SymbolicIndexingInterfacePrettyTablesExt 8536.2 ms ✓ RecursiveArrayTools 7015.5 ms ✓ ForwardDiff 16221.2 ms ✓ PyCall 26370.8 ms ✓ CSV 1745.3 ms ✓ StrideArraysCore 1197.6 ms ✓ RecursiveArrayTools → RecursiveArrayToolsStatisticsExt 1596.3 ms ✓ RecursiveArrayTools → RecursiveArrayToolsSparseArraysExt 1246.7 ms ✓ RecursiveArrayTools → RecursiveArrayToolsTablesExt 1719.5 ms ✓ ForwardDiff → ForwardDiffStaticArraysExt 1124.0 ms ✓ FastPower → FastPowerForwardDiffExt 1379.4 ms ✓ DifferentiationInterface → DifferentiationInterfaceForwardDiffExt 1156.3 ms ✓ PreallocationTools → PreallocationToolsForwardDiffExt 1587.2 ms ✓ RecursiveArrayTools → RecursiveArrayToolsForwardDiffExt 6011.2 ms ✓ PyPlot 1389.0 ms ✓ Polyester 30754.8 ms ✓ SciMLBase 1887.4 ms ✓ NLSolversBase 1482.4 ms ✓ FastBroadcast 2676.0 ms ✓ SciMLBase → SciMLBaseChainRulesCoreExt 5985.9 ms ✓ SciMLBase → SciMLBasePyCallExt 2583.7 ms ✓ SciMLBase → SciMLBaseDifferentiationInterfaceExt 3281.2 ms ✓ SciMLBase → SciMLBaseForwardDiffExt 2301.3 ms ✓ LineSearches 1737.7 ms ✓ RecursiveArrayTools → RecursiveArrayToolsFastBroadcastExt 23434.9 ms ✓ LinearSolve 7340.4 ms ✓ SciMLJacobianOperators 2907.9 ms ✓ NLsolve 7132.4 ms ✓ LinearSolve → LinearSolveForwardDiffExt 8201.1 ms ✓ LinearSolve → LinearSolveSparseArraysExt 12360.9 ms ✓ LineSearch 18882.5 ms ✓ NonlinearSolveBase 3750.2 ms ✓ LinearSolve → LinearSolveEnzymeExt 3161.3 ms ✓ LineSearch → LineSearchLineSearchesExt 3282.9 ms ✓ NonlinearSolveBase → NonlinearSolveBaseSparseMatrixColoringsExt 3736.3 ms ✓ NonlinearSolveBase → NonlinearSolveBaseForwardDiffExt 3211.1 ms ✓ NonlinearSolveBase → NonlinearSolveBaseSparseArraysExt 2809.0 ms ✓ NonlinearSolveBase → NonlinearSolveBaseLineSearchExt 3611.5 ms ✓ NonlinearSolveBase → NonlinearSolveBaseLinearSolveExt 2791.3 ms ✓ NonlinearSolveBase → NonlinearSolveBaseChainRulesCoreExt 9170.0 ms ✓ BracketingNonlinearSolve 18298.2 ms ✓ NonlinearSolveSpectralMethods 31661.6 ms ✓ NonlinearSolveQuasiNewton 56980.0 ms ✓ NonlinearSolveFirstOrder 3154.2 ms ✓ BracketingNonlinearSolve → BracketingNonlinearSolveForwardDiffExt 7971.5 ms ✓ DiffEqBase 3427.5 ms ✓ NonlinearSolveSpectralMethods → NonlinearSolveSpectralMethodsForwardDiffExt 4720.9 ms ✓ NonlinearSolveQuasiNewton → NonlinearSolveQuasiNewtonForwardDiffExt 3138.6 ms ✓ BracketingNonlinearSolve → BracketingNonlinearSolveChainRulesCoreExt 22867.4 ms ✓ SimpleNonlinearSolve 3667.9 ms ✓ DiffEqBase → DiffEqBaseChainRulesCoreExt 3630.6 ms ✓ DiffEqBase → DiffEqBaseForwardDiffExt 3541.6 ms ✓ DiffEqBase → DiffEqBaseSparseArraysExt 10848.8 ms ✓ OrdinaryDiffEqCore 3680.8 ms ✓ SimpleNonlinearSolve → SimpleNonlinearSolveChainRulesCoreExt 5224.0 ms ✓ DiffEqCallbacks 25547.8 ms ✓ Sundials 3566.1 ms ✓ OrdinaryDiffEqCore → OrdinaryDiffEqCoreEnzymeCoreExt 37693.7 ms ✓ NonlinearSolve ✗ SteadyStateDiffEq 5854.5 ms ✓ OrdinaryDiffEqExplicitRK 7139.5 ms ✓ OrdinaryDiffEqHighOrderRK 7238.4 ms ✓ OrdinaryDiffEqStabilizedRK 6265.8 ms ✓ OrdinaryDiffEqSymplecticRK 8527.0 ms ✓ OrdinaryDiffEqSSPRK 8946.0 ms ✓ OrdinaryDiffEqLowOrderRK 4748.1 ms ✓ OrdinaryDiffEqFunctionMap 5784.1 ms ✓ OrdinaryDiffEqLinear 13460.1 ms ✓ OrdinaryDiffEqTsit5 74048.2 ms ✓ OrdinaryDiffEqVerner 6492.4 ms ✓ OrdinaryDiffEqPRK 6890.6 ms ✓ OrdinaryDiffEqRKN 6764.2 ms ✓ OrdinaryDiffEqFeagin 6035.0 ms ✓ OrdinaryDiffEqQPRK 9692.5 ms ✓ OrdinaryDiffEqLowStorageRK 11083.4 ms ✓ OrdinaryDiffEqDifferentiation 9228.2 ms ✓ NonlinearSolve → NonlinearSolveNLsolveExt 8036.4 ms ✓ NonlinearSolve → NonlinearSolveSundialsExt 6796.2 ms ✓ OrdinaryDiffEqAdamsBashforthMoulton 5439.1 ms ✓ OrdinaryDiffEqNordsieck 5712.6 ms ✓ OrdinaryDiffEqDifferentiation → OrdinaryDiffEqDifferentiationSparseArraysExt 10088.5 ms ✓ OrdinaryDiffEqExponentialRK 11812.2 ms ✓ OrdinaryDiffEqExtrapolation 51834.9 ms ✓ OrdinaryDiffEqRosenbrock 11584.3 ms ✓ OrdinaryDiffEqNonlinearSolve 12094.1 ms ✓ OrdinaryDiffEqPDIRK 11169.8 ms ✓ OrdinaryDiffEqStabilizedIRK 13466.6 ms ✓ OrdinaryDiffEqSDIRK 52402.4 ms ✓ OrdinaryDiffEqFIRK 10245.0 ms ✓ OrdinaryDiffEqIMEXMultistep 32735.2 ms ✓ OrdinaryDiffEqBDF 80367.0 ms ✓ OrdinaryDiffEqDefault 15214.4 ms ✓ OrdinaryDiffEq 16683.3 ms ✓ DelayDiffEq 8706.2 ms ✓ BioMASS 263 dependencies successfully precompiled in 1599 seconds. 37 already precompiled. 1 dependency had output during precompilation: ┌ MKL_jll │ Downloading artifact: IntelOpenMP │ Downloading artifact: oneTBB └ ERROR: LoadError: The following 1 direct dependency failed to precompile: SteadyStateDiffEq Failed to precompile SteadyStateDiffEq [9672c7b4-1e72-59bd-8a11-6ac3964bc41f] to "/home/pkgeval/.julia/compiled/v1.11/SteadyStateDiffEq/jl_gHrG8X". ERROR: LoadError: UndefVarError: `NLSolveTerminationCondition` not defined in `SteadyStateDiffEq` Stacktrace: [1] top-level scope @ ~/.julia/packages/SteadyStateDiffEq/E6oYM/src/algorithms.jl:12 [2] include(mod::Module, _path::String) @ Base ./Base.jl:562 [3] include(x::String) @ SteadyStateDiffEq ~/.julia/packages/SteadyStateDiffEq/E6oYM/src/SteadyStateDiffEq.jl:1 [4] top-level scope @ ~/.julia/packages/SteadyStateDiffEq/E6oYM/src/SteadyStateDiffEq.jl:10 [5] include @ ./Base.jl:562 [inlined] [6] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:2924 [7] top-level scope @ stdin:6 in expression starting at /home/pkgeval/.julia/packages/SteadyStateDiffEq/E6oYM/src/algorithms.jl:12 in expression starting at /home/pkgeval/.julia/packages/SteadyStateDiffEq/E6oYM/src/SteadyStateDiffEq.jl:1 in expression starting at stdin: in expression starting at /PkgEval.jl/scripts/precompile.jl:34 Precompilation failed after 1606.52s ################################################################################ # Testing # Testing BioMASS Status `/tmp/jl_Pfyais/Project.toml` [324734c7] BioMASS v0.8.2 [336ed68f] CSV v0.10.15 [a93c6f00] DataFrames v1.8.1 ⌃ [bcd4f6db] DelayDiffEq v5.64.0 [8bb1440f] DelimitedFiles v1.9.1 ⌅ [f6369f11] ForwardDiff v0.10.39 [438e738f] PyCall v1.96.4 [d330b81b] PyPlot v2.11.6 [10745b16] Statistics v1.11.1 ⌅ [2913bbd2] StatsBase v0.33.21 ⌅ [9672c7b4] SteadyStateDiffEq v1.16.1 ⌅ [c3572dad] Sundials v4.28.0 [37e2e46d] LinearAlgebra v1.11.0 [de0858da] Printf v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_Pfyais/Manifest.toml` [47edcb42] ADTypes v1.21.0 [7d9f7c33] Accessors v0.1.43 [79e6a3ab] Adapt v4.4.0 [4fba245c] ArrayInterface v7.22.0 [324734c7] BioMASS v0.8.2 [62783981] BitTwiddlingConvenienceFunctions v0.1.6 [70df07ce] BracketingNonlinearSolve v1.6.2 [fa961155] CEnum v0.5.0 [2a0fbf3d] CPUSummary v0.2.7 [336ed68f] CSV v0.10.15 [d360d2e6] ChainRulesCore v1.26.0 [fb6a15b2] CloseOpenIntervals v0.1.13 [944b1d66] CodecZlib v0.7.8 [3da002f7] ColorTypes v0.12.1 [5ae59095] Colors v0.13.1 [38540f10] CommonSolve v0.2.6 [bbf7d656] CommonSubexpressions v0.3.1 [f70d9fcc] CommonWorldInvalidations v1.0.0 [34da2185] Compat v4.18.1 [a33af91c] CompositionsBase v0.1.2 [2569d6c7] ConcreteStructs v0.2.3 [8f4d0f93] Conda v1.10.3 [187b0558] ConstructionBase v1.6.0 [adafc99b] CpuId v0.3.1 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.8.1 ⌅ [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 ⌃ [bcd4f6db] DelayDiffEq v5.64.0 [8bb1440f] DelimitedFiles v1.9.1 [2b5f629d] DiffEqBase v6.199.0 ⌅ [459566f4] DiffEqCallbacks v2.37.0 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [a0c0ee7d] DifferentiationInterface v0.7.14 [b4f34e82] Distances v0.10.12 [ffbed154] DocStringExtensions v0.9.5 [4e289a0a] EnumX v1.0.5 [f151be2c] EnzymeCore v0.8.18 [d4d017d3] ExponentialUtilities v1.30.0 [e2ba6199] ExprTools v0.1.10 [55351af7] ExproniconLite v0.10.14 [7034ab61] FastBroadcast v0.3.5 [9aa1b823] FastClosures v0.3.2 [442a2c76] FastGaussQuadrature v1.1.0 [a4df4552] FastPower v1.3.0 [48062228] FilePathsBase v0.9.24 [1a297f60] FillArrays v1.16.0 [6a86dc24] FiniteDiff v2.29.0 [53c48c17] FixedPointNumbers v0.8.5 ⌅ [f6369f11] ForwardDiff v0.10.39 [069b7b12] FunctionWrappers v1.1.3 [77dc65aa] FunctionWrappersWrappers v0.1.3 ⌅ [d9f16b24] Functors v0.4.12 [46192b85] GPUArraysCore v0.2.0 [c145ed77] GenericSchur v0.5.6 [615f187c] IfElse v0.1.1 [842dd82b] InlineStrings v1.4.5 [3587e190] InverseFunctions v0.1.17 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.6 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.1 [682c06a0] JSON v1.4.0 [ae98c720] Jieko v0.2.1 [ba0b0d4f] Krylov v0.10.3 [b964fa9f] LaTeXStrings v1.4.0 [10f19ff3] LayoutPointers v0.1.17 [87fe0de2] LineSearch v0.1.6 ⌃ [d3d80556] LineSearches v7.5.1 [7ed4a6bd] LinearSolve v3.57.0 [2ab3a3ac] LogExpFunctions v0.3.29 [e6f89c97] LoggingExtras v1.2.0 [1914dd2f] MacroTools v0.5.16 [d125e4d3] ManualMemory v0.1.8 [bb5d69b7] MaybeInplace v0.1.4 [e1d29d7a] Missings v1.2.0 [2e0e35c7] Moshi v0.3.7 [46d2c3a1] MuladdMacro v0.2.4 ⌅ [d41bc354] NLSolversBase v7.10.0 [2774e3e8] NLsolve v4.5.1 [77ba4419] NaNMath v1.1.3 ⌃ [8913a72c] NonlinearSolve v4.12.0 [be0214bd] NonlinearSolveBase v2.9.2 [5959db7a] NonlinearSolveFirstOrder v1.11.0 [9a2c21bd] NonlinearSolveQuasiNewton v1.12.0 [26075421] NonlinearSolveSpectralMethods v1.6.0 [bac558e1] OrderedCollections v1.8.1 ⌃ [1dea7af3] OrdinaryDiffEq v6.105.0 ⌃ [89bda076] OrdinaryDiffEqAdamsBashforthMoulton v1.8.0 ⌃ [6ad6398a] OrdinaryDiffEqBDF v1.13.0 ⌅ [bbf590c4] OrdinaryDiffEqCore v2.3.0 ⌃ [50262376] OrdinaryDiffEqDefault v1.11.0 ⌃ [4302a76b] OrdinaryDiffEqDifferentiation v1.21.0 ⌃ [9286f039] OrdinaryDiffEqExplicitRK v1.7.0 ⌃ [e0540318] OrdinaryDiffEqExponentialRK v1.11.0 ⌃ [becaefa8] OrdinaryDiffEqExtrapolation v1.12.0 ⌃ [5960d6e9] OrdinaryDiffEqFIRK v1.19.0 ⌃ [101fe9f7] OrdinaryDiffEqFeagin v1.7.0 ⌃ [d3585ca7] OrdinaryDiffEqFunctionMap v1.8.0 ⌃ [d28bc4f8] OrdinaryDiffEqHighOrderRK v1.8.0 ⌃ [9f002381] OrdinaryDiffEqIMEXMultistep v1.10.0 ⌃ [521117fe] OrdinaryDiffEqLinear v1.9.0 ⌃ [1344f307] OrdinaryDiffEqLowOrderRK v1.9.0 ⌃ [b0944070] OrdinaryDiffEqLowStorageRK v1.10.0 ⌃ [127b3ac7] OrdinaryDiffEqNonlinearSolve v1.18.1 ⌃ [c9986a66] OrdinaryDiffEqNordsieck v1.7.0 ⌃ [5dd0a6cf] OrdinaryDiffEqPDIRK v1.9.0 ⌃ [5b33eab2] OrdinaryDiffEqPRK v1.7.0 ⌃ [04162be5] OrdinaryDiffEqQPRK v1.7.0 ⌃ [af6ede74] OrdinaryDiffEqRKN v1.8.0 ⌃ [43230ef6] OrdinaryDiffEqRosenbrock v1.21.0 ⌃ [2d112036] OrdinaryDiffEqSDIRK v1.10.0 ⌃ [669c94d9] OrdinaryDiffEqSSPRK v1.10.0 ⌃ [e3e12d00] OrdinaryDiffEqStabilizedIRK v1.9.0 ⌃ [358294b1] OrdinaryDiffEqStabilizedRK v1.7.0 ⌃ [fa646aed] OrdinaryDiffEqSymplecticRK v1.10.0 ⌃ [b1df2697] OrdinaryDiffEqTsit5 v1.8.0 ⌃ [79d7bb75] OrdinaryDiffEqVerner v1.9.0 [d96e819e] Parameters v0.12.3 [69de0a69] Parsers v2.8.3 [f517fe37] Polyester v0.7.18 [1d0040c9] PolyesterWeave v0.2.2 [2dfb63ee] PooledArrays v1.4.3 ⌅ [d236fae5] PreallocationTools v0.4.34 ⌅ [aea7be01] PrecompileTools v1.2.1 [21216c6a] Preferences v1.5.1 [08abe8d2] PrettyTables v3.1.2 [438e738f] PyCall v1.96.4 [d330b81b] PyPlot v2.11.6 [3cdcf5f2] RecipesBase v1.3.4 [731186ca] RecursiveArrayTools v3.44.0 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [7e49a35a] RuntimeGeneratedFunctions v0.5.16 [94e857df] SIMDTypes v0.1.0 [0bca4576] SciMLBase v2.134.0 [19f34311] SciMLJacobianOperators v0.1.12 [a6db7da4] SciMLLogging v1.8.0 [c0aeaf25] SciMLOperators v1.14.1 [431bcebd] SciMLPublic v1.0.1 [53ae85a6] SciMLStructures v1.10.0 [91c51154] SentinelArrays v1.4.9 [efcf1570] Setfield v1.1.2 [727e6d20] SimpleNonlinearSolve v2.10.0 [a2af1166] SortingAlgorithms v1.2.2 [0a514795] SparseMatrixColorings v0.4.23 [276daf66] SpecialFunctions v2.6.1 [aedffcd0] Static v1.3.1 [0d7ed370] StaticArrayInterface v1.8.0 [90137ffa] StaticArrays v1.9.16 [1e83bf80] StaticArraysCore v1.4.4 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.8.0 ⌅ [2913bbd2] StatsBase v0.33.21 ⌅ [9672c7b4] SteadyStateDiffEq v1.16.1 [7792a7ef] StrideArraysCore v0.5.8 [892a3eda] StringManipulation v0.4.2 [ec057cc2] StructUtils v2.6.2 ⌅ [c3572dad] Sundials v4.28.0 [2efcf032] SymbolicIndexingInterface v0.3.46 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [8290d209] ThreadingUtilities v0.5.5 [a759f4b9] TimerOutputs v0.5.29 [3bb67fe8] TranscodingStreams v0.11.3 [781d530d] TruncatedStacktraces v1.4.0 [3a884ed6] UnPack v1.0.2 [81def892] VersionParsing v1.3.0 [ea10d353] WeakRefStrings v1.4.2 [76eceee3] WorkerUtilities v1.6.1 [1d5cc7b8] IntelOpenMP_jll v2025.2.0+0 [856f044c] MKL_jll v2025.2.0+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 ⌅ [fb77eaff] Sundials_jll v5.2.3+0 [1317d2d5] oneTBB_jll v2022.0.0+1 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.6.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.11.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.2.0 [44cfe95a] Pkg v1.11.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.11.0 [f489334b] StyledStrings v1.11.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] LibCURL_jll v8.6.0+0 [e37daf67] LibGit2_jll v1.7.2+0 [29816b5a] LibSSH2_jll v1.11.0+1 [c8ffd9c3] MbedTLS_jll v2.28.6+0 [14a3606d] MozillaCACerts_jll v2023.12.12 [4536629a] OpenBLAS_jll v0.3.27+1 [05823500] OpenLibm_jll v0.8.5+0 [bea87d4a] SuiteSparse_jll v7.7.0+0 [83775a58] Zlib_jll v1.2.13+1 [8e850b90] libblastrampoline_jll v5.11.0+0 [8e850ede] nghttp2_jll v1.59.0+0 [3f19e933] p7zip_jll v17.4.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... [ Info: Installing matplotlib via the Conda matplotlib package... [ Info: Running `conda install -q -y matplotlib` in root environment Channels: - conda-forge Platform: linux-64 Collecting package metadata (repodata.json): ...working... done Solving environment: ...working... done ## Package Plan ## environment location: /home/pkgeval/.julia/conda/3/x86_64 added / updated specs: - matplotlib The following packages will be downloaded: package | build ---------------------------|----------------- alsa-lib-1.2.15.3 | hb03c661_0 571 KB conda-forge brotli-1.2.0 | hed03a55_1 20 KB conda-forge brotli-bin-1.2.0 | hb03c661_1 21 KB conda-forge cairo-1.18.4 | he90730b_1 966 KB conda-forge contourpy-1.3.3 | py312hd9148b4_3 288 KB conda-forge cycler-0.12.1 | pyhcf101f3_2 14 KB conda-forge cyrus-sasl-2.1.28 | hd9c7081_0 205 KB conda-forge dbus-1.16.2 | h24cb091_1 437 KB conda-forge double-conversion-3.4.0 | hecca717_0 70 KB conda-forge font-ttf-dejavu-sans-mono-2.37| hab24e00_0 388 KB conda-forge font-ttf-inconsolata-3.000 | h77eed37_0 94 KB conda-forge font-ttf-source-code-pro-2.038| h77eed37_0 684 KB conda-forge font-ttf-ubuntu-0.83 | h77eed37_3 1.5 MB conda-forge fontconfig-2.15.0 | h7e30c49_1 259 KB conda-forge fonts-conda-ecosystem-1 | 0 4 KB conda-forge fonts-conda-forge-1 | hc364b38_1 4 KB conda-forge fonttools-4.61.1 | py312h8a5da7c_0 2.8 MB conda-forge freetype-2.14.1 | ha770c72_0 169 KB conda-forge graphite2-1.3.14 | hecca717_2 97 KB conda-forge harfbuzz-12.3.0 | h6083320_0 2.0 MB conda-forge icu-78.2 | h33c6efd_0 12.1 MB conda-forge kiwisolver-1.4.9 | py312h0a2e395_2 76 KB conda-forge lcms2-2.18 | h0c24ade_0 244 KB conda-forge lerc-4.0.0 | h0aef613_1 258 KB conda-forge libbrotlicommon-1.2.0 | hb03c661_1 78 KB conda-forge libbrotlidec-1.2.0 | hb03c661_1 34 KB conda-forge libbrotlienc-1.2.0 | hb03c661_1 291 KB conda-forge libclang-cpp21.1-21.1.8 |default_h99862b1_1 20.1 MB conda-forge libclang13-21.1.8 |default_h746c552_1 11.8 MB conda-forge libcups-2.3.3 | hb8b1518_5 4.3 MB conda-forge libdeflate-1.25 | h17f619e_0 72 KB conda-forge libdrm-2.4.125 | hb03c661_1 304 KB conda-forge libegl-1.7.0 | ha4b6fd6_2 44 KB conda-forge libfreetype-2.14.1 | ha770c72_0 7 KB conda-forge libfreetype6-2.14.1 | h73754d4_0 378 KB conda-forge libgl-1.7.0 | ha4b6fd6_2 132 KB conda-forge libglib-2.86.3 | h6548e54_0 3.8 MB conda-forge libglvnd-1.7.0 | ha4b6fd6_2 129 KB conda-forge libglx-1.7.0 | ha4b6fd6_2 74 KB conda-forge libjpeg-turbo-3.1.2 | hb03c661_0 619 KB conda-forge libllvm21-21.1.8 | hf7376ad_0 42.3 MB conda-forge libntlm-1.8 | hb9d3cd8_0 33 KB conda-forge libopengl-1.7.0 | ha4b6fd6_2 50 KB conda-forge libpciaccess-0.18 | hb9d3cd8_0 28 KB conda-forge libpng-1.6.54 | h421ea60_0 310 KB conda-forge libpq-18.1 | hb80d175_3 2.6 MB conda-forge libtiff-4.7.1 | h9d88235_1 425 KB conda-forge libvulkan-loader-1.4.328.1 | h5279c79_0 193 KB conda-forge libwebp-base-1.6.0 | hd42ef1d_0 419 KB conda-forge libxcb-1.17.0 | h8a09558_0 387 KB conda-forge libxkbcommon-1.13.1 | hca5e8e5_0 818 KB conda-forge libxml2-2.15.1 | he237659_1 44 KB conda-forge libxml2-16-2.15.1 | hca6bf5a_1 543 KB conda-forge libxslt-1.1.43 | h711ed8c_1 240 KB conda-forge matplotlib-3.10.8 | py312h7900ff3_0 17 KB conda-forge matplotlib-base-3.10.8 | py312he3d6523_0 8.1 MB conda-forge munkres-1.1.4 | pyhd8ed1ab_1 15 KB conda-forge openjpeg-2.5.4 | h55fea9a_0 347 KB conda-forge openldap-2.6.10 | he970967_0 762 KB conda-forge pcre2-10.47 | haa7fec5_0 1.2 MB conda-forge pillow-12.1.0 | py312h50c33e8_0 1005 KB conda-forge pixman-0.46.4 | h54a6638_1 440 KB conda-forge pthread-stubs-0.4 | hb9d3cd8_1002 8 KB conda-forge pyparsing-3.3.1 | pyhcf101f3_0 108 KB conda-forge pyside6-6.10.1 | py312h9da60e5_0 11.1 MB conda-forge python-dateutil-2.9.0.post0| pyhe01879c_2 228 KB conda-forge qhull-2020.2 | h434a139_5 540 KB conda-forge qt6-main-6.10.1 | hb82b983_4 54.6 MB conda-forge six-1.17.0 | pyhe01879c_1 18 KB conda-forge tornado-6.5.4 | py312h961da02_0 831 KB conda-forge unicodedata2-17.0.0 | py312h4c3975b_1 399 KB conda-forge wayland-1.24.0 | hd6090a7_1 322 KB conda-forge xcb-util-0.4.1 | h4f16b4b_2 20 KB conda-forge xcb-util-cursor-0.1.6 | hb03c661_0 20 KB conda-forge xcb-util-image-0.4.0 | hb711507_2 24 KB conda-forge xcb-util-keysyms-0.4.1 | hb711507_0 14 KB conda-forge xcb-util-renderutil-0.3.10 | hb711507_0 17 KB conda-forge xcb-util-wm-0.4.2 | hb711507_0 50 KB conda-forge xkeyboard-config-2.46 | hb03c661_0 388 KB conda-forge xorg-libice-1.1.2 | hb9d3cd8_0 57 KB conda-forge xorg-libsm-1.2.6 | he73a12e_0 27 KB conda-forge xorg-libx11-1.8.12 | h4f16b4b_0 816 KB conda-forge xorg-libxau-1.0.12 | hb03c661_1 15 KB conda-forge xorg-libxcomposite-0.4.6 | hb9d3cd8_2 13 KB conda-forge xorg-libxcursor-1.2.3 | hb9d3cd8_0 32 KB conda-forge xorg-libxdamage-1.1.6 | hb9d3cd8_0 13 KB conda-forge xorg-libxdmcp-1.1.5 | hb03c661_1 20 KB conda-forge xorg-libxext-1.3.6 | hb9d3cd8_0 49 KB conda-forge xorg-libxfixes-6.0.2 | hb03c661_0 20 KB conda-forge xorg-libxi-1.8.2 | hb9d3cd8_0 46 KB conda-forge xorg-libxrandr-1.5.4 | hb9d3cd8_0 29 KB conda-forge xorg-libxrender-0.9.12 | hb9d3cd8_0 32 KB conda-forge xorg-libxtst-1.2.5 | hb9d3cd8_3 32 KB conda-forge xorg-libxxf86vm-1.1.6 | hb9d3cd8_0 17 KB conda-forge zlib-ng-2.3.2 | hceb46e0_1 119 KB conda-forge ------------------------------------------------------------ Total: 195.2 MB The following NEW packages will be INSTALLED: alsa-lib conda-forge/linux-64::alsa-lib-1.2.15.3-hb03c661_0 brotli conda-forge/linux-64::brotli-1.2.0-hed03a55_1 brotli-bin conda-forge/linux-64::brotli-bin-1.2.0-hb03c661_1 cairo conda-forge/linux-64::cairo-1.18.4-he90730b_1 contourpy conda-forge/linux-64::contourpy-1.3.3-py312hd9148b4_3 cycler conda-forge/noarch::cycler-0.12.1-pyhcf101f3_2 cyrus-sasl conda-forge/linux-64::cyrus-sasl-2.1.28-hd9c7081_0 dbus conda-forge/linux-64::dbus-1.16.2-h24cb091_1 double-conversion conda-forge/linux-64::double-conversion-3.4.0-hecca717_0 font-ttf-dejavu-s~ conda-forge/noarch::font-ttf-dejavu-sans-mono-2.37-hab24e00_0 font-ttf-inconsol~ conda-forge/noarch::font-ttf-inconsolata-3.000-h77eed37_0 font-ttf-source-c~ conda-forge/noarch::font-ttf-source-code-pro-2.038-h77eed37_0 font-ttf-ubuntu conda-forge/noarch::font-ttf-ubuntu-0.83-h77eed37_3 fontconfig conda-forge/linux-64::fontconfig-2.15.0-h7e30c49_1 fonts-conda-ecosy~ conda-forge/noarch::fonts-conda-ecosystem-1-0 fonts-conda-forge conda-forge/noarch::fonts-conda-forge-1-hc364b38_1 fonttools conda-forge/linux-64::fonttools-4.61.1-py312h8a5da7c_0 freetype conda-forge/linux-64::freetype-2.14.1-ha770c72_0 graphite2 conda-forge/linux-64::graphite2-1.3.14-hecca717_2 harfbuzz conda-forge/linux-64::harfbuzz-12.3.0-h6083320_0 icu conda-forge/linux-64::icu-78.2-h33c6efd_0 kiwisolver conda-forge/linux-64::kiwisolver-1.4.9-py312h0a2e395_2 lcms2 conda-forge/linux-64::lcms2-2.18-h0c24ade_0 lerc conda-forge/linux-64::lerc-4.0.0-h0aef613_1 libbrotlicommon conda-forge/linux-64::libbrotlicommon-1.2.0-hb03c661_1 libbrotlidec conda-forge/linux-64::libbrotlidec-1.2.0-hb03c661_1 libbrotlienc conda-forge/linux-64::libbrotlienc-1.2.0-hb03c661_1 libclang-cpp21.1 conda-forge/linux-64::libclang-cpp21.1-21.1.8-default_h99862b1_1 libclang13 conda-forge/linux-64::libclang13-21.1.8-default_h746c552_1 libcups conda-forge/linux-64::libcups-2.3.3-hb8b1518_5 libdeflate conda-forge/linux-64::libdeflate-1.25-h17f619e_0 libdrm conda-forge/linux-64::libdrm-2.4.125-hb03c661_1 libegl conda-forge/linux-64::libegl-1.7.0-ha4b6fd6_2 libfreetype conda-forge/linux-64::libfreetype-2.14.1-ha770c72_0 libfreetype6 conda-forge/linux-64::libfreetype6-2.14.1-h73754d4_0 libgl conda-forge/linux-64::libgl-1.7.0-ha4b6fd6_2 libglib conda-forge/linux-64::libglib-2.86.3-h6548e54_0 libglvnd conda-forge/linux-64::libglvnd-1.7.0-ha4b6fd6_2 libglx conda-forge/linux-64::libglx-1.7.0-ha4b6fd6_2 libjpeg-turbo conda-forge/linux-64::libjpeg-turbo-3.1.2-hb03c661_0 libllvm21 conda-forge/linux-64::libllvm21-21.1.8-hf7376ad_0 libntlm conda-forge/linux-64::libntlm-1.8-hb9d3cd8_0 libopengl conda-forge/linux-64::libopengl-1.7.0-ha4b6fd6_2 libpciaccess conda-forge/linux-64::libpciaccess-0.18-hb9d3cd8_0 libpng conda-forge/linux-64::libpng-1.6.54-h421ea60_0 libpq conda-forge/linux-64::libpq-18.1-hb80d175_3 libtiff conda-forge/linux-64::libtiff-4.7.1-h9d88235_1 libvulkan-loader conda-forge/linux-64::libvulkan-loader-1.4.328.1-h5279c79_0 libwebp-base conda-forge/linux-64::libwebp-base-1.6.0-hd42ef1d_0 libxcb conda-forge/linux-64::libxcb-1.17.0-h8a09558_0 libxkbcommon conda-forge/linux-64::libxkbcommon-1.13.1-hca5e8e5_0 libxslt conda-forge/linux-64::libxslt-1.1.43-h711ed8c_1 matplotlib conda-forge/linux-64::matplotlib-3.10.8-py312h7900ff3_0 matplotlib-base conda-forge/linux-64::matplotlib-base-3.10.8-py312he3d6523_0 munkres conda-forge/noarch::munkres-1.1.4-pyhd8ed1ab_1 openjpeg conda-forge/linux-64::openjpeg-2.5.4-h55fea9a_0 openldap conda-forge/linux-64::openldap-2.6.10-he970967_0 pcre2 conda-forge/linux-64::pcre2-10.47-haa7fec5_0 pillow conda-forge/linux-64::pillow-12.1.0-py312h50c33e8_0 pixman conda-forge/linux-64::pixman-0.46.4-h54a6638_1 pthread-stubs conda-forge/linux-64::pthread-stubs-0.4-hb9d3cd8_1002 pyparsing conda-forge/noarch::pyparsing-3.3.1-pyhcf101f3_0 pyside6 conda-forge/linux-64::pyside6-6.10.1-py312h9da60e5_0 python-dateutil conda-forge/noarch::python-dateutil-2.9.0.post0-pyhe01879c_2 qhull conda-forge/linux-64::qhull-2020.2-h434a139_5 qt6-main conda-forge/linux-64::qt6-main-6.10.1-hb82b983_4 six conda-forge/noarch::six-1.17.0-pyhe01879c_1 tornado conda-forge/linux-64::tornado-6.5.4-py312h961da02_0 unicodedata2 conda-forge/linux-64::unicodedata2-17.0.0-py312h4c3975b_1 wayland conda-forge/linux-64::wayland-1.24.0-hd6090a7_1 xcb-util conda-forge/linux-64::xcb-util-0.4.1-h4f16b4b_2 xcb-util-cursor conda-forge/linux-64::xcb-util-cursor-0.1.6-hb03c661_0 xcb-util-image conda-forge/linux-64::xcb-util-image-0.4.0-hb711507_2 xcb-util-keysyms conda-forge/linux-64::xcb-util-keysyms-0.4.1-hb711507_0 xcb-util-renderut~ conda-forge/linux-64::xcb-util-renderutil-0.3.10-hb711507_0 xcb-util-wm conda-forge/linux-64::xcb-util-wm-0.4.2-hb711507_0 xkeyboard-config conda-forge/linux-64::xkeyboard-config-2.46-hb03c661_0 xorg-libice conda-forge/linux-64::xorg-libice-1.1.2-hb9d3cd8_0 xorg-libsm conda-forge/linux-64::xorg-libsm-1.2.6-he73a12e_0 xorg-libx11 conda-forge/linux-64::xorg-libx11-1.8.12-h4f16b4b_0 xorg-libxau conda-forge/linux-64::xorg-libxau-1.0.12-hb03c661_1 xorg-libxcomposite conda-forge/linux-64::xorg-libxcomposite-0.4.6-hb9d3cd8_2 xorg-libxcursor conda-forge/linux-64::xorg-libxcursor-1.2.3-hb9d3cd8_0 xorg-libxdamage conda-forge/linux-64::xorg-libxdamage-1.1.6-hb9d3cd8_0 xorg-libxdmcp conda-forge/linux-64::xorg-libxdmcp-1.1.5-hb03c661_1 xorg-libxext conda-forge/linux-64::xorg-libxext-1.3.6-hb9d3cd8_0 xorg-libxfixes conda-forge/linux-64::xorg-libxfixes-6.0.2-hb03c661_0 xorg-libxi conda-forge/linux-64::xorg-libxi-1.8.2-hb9d3cd8_0 xorg-libxrandr conda-forge/linux-64::xorg-libxrandr-1.5.4-hb9d3cd8_0 xorg-libxrender conda-forge/linux-64::xorg-libxrender-0.9.12-hb9d3cd8_0 xorg-libxtst conda-forge/linux-64::xorg-libxtst-1.2.5-hb9d3cd8_3 xorg-libxxf86vm conda-forge/linux-64::xorg-libxxf86vm-1.1.6-hb9d3cd8_0 zlib-ng conda-forge/linux-64::zlib-ng-2.3.2-hceb46e0_1 The following packages will be UPDATED: libxml2 2.15.1-h031cc0b_0 --> 2.15.1-he237659_1 libxml2-16 2.15.1-hf2a90c1_0 --> 2.15.1-hca6bf5a_1 Preparing transaction: ...working... done Verifying transaction: ...working... done Executing transaction: ...working... done ERROR: LoadError: InitError: PyError (PyImport_ImportModule The Python package matplotlib could not be imported by pyimport. Usually this means that you did not install matplotlib in the Python version being used by PyCall. PyCall is currently configured to use the Julia-specific Python distribution installed by the Conda.jl package. To install the matplotlib module, you can use `pyimport_conda("matplotlib", PKG)`, where PKG is the Anaconda package that contains the module matplotlib, or alternatively you can use the Conda package directly (via `using Conda` followed by `Conda.add` etcetera). Alternatively, if you want to use a different Python distribution on your system, such as a system-wide Python (as opposed to the Julia-specific Python), you can re-configure PyCall with that Python. As explained in the PyCall documentation, set ENV["PYTHON"] to the path/name of the python executable you want to use, run Pkg.build("PyCall"), and re-launch Julia. ) ImportError("/opt/julia/bin/../lib/julia/libstdc++.so.6: version `CXXABI_1.3.15' not found (required by /home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/matplotlib/_c_internal_utils.cpython-312-x86_64-linux-gnu.so)") File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/matplotlib/__init__.py", line 161, in from . import _api, _version, cbook, _docstring, rcsetup File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/matplotlib/cbook.py", line 32, in from matplotlib import _api, _c_internal_utils Stacktrace: [1] pyimport(name::String) @ PyCall ~/.julia/packages/PyCall/1gn3u/src/PyCall.jl:558 [2] pyimport_conda(modulename::String, condapkg::String, channel::String) @ PyCall ~/.julia/packages/PyCall/1gn3u/src/PyCall.jl:722 [3] pyimport_conda @ ~/.julia/packages/PyCall/1gn3u/src/PyCall.jl:715 [inlined] [4] __init__() @ PyPlot ~/.julia/packages/PyPlot/G422O/src/init.jl:174 [5] run_module_init(mod::Module, i::Int64) @ Base ./loading.jl:1378 [6] register_restored_modules(sv::Core.SimpleVector, pkg::Base.PkgId, path::String) @ Base ./loading.jl:1366 [7] _include_from_serialized(pkg::Base.PkgId, path::String, ocachepath::Nothing, depmods::Vector{Any}, ignore_native::Nothing; register::Bool) @ Base ./loading.jl:1254 [8] _include_from_serialized (repeats 2 times) @ ./loading.jl:1210 [inlined] [9] _require_search_from_serialized(pkg::Base.PkgId, sourcepath::String, build_id::UInt128, stalecheck::Bool; reasons::Dict{String, Int64}, DEPOT_PATH::Vector{String}) @ Base ./loading.jl:2041 [10] _require(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2527 [11] __require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2388 [12] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [13] invoke_in_world @ ./essentials.jl:1086 [inlined] [14] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2375 [15] macro expansion @ ./loading.jl:2314 [inlined] [16] macro expansion @ ./lock.jl:273 [inlined] [17] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2271 [18] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [19] invoke_in_world @ ./essentials.jl:1086 [inlined] [20] require(into::Module, mod::Symbol) @ Base ./loading.jl:2260 [21] include(fname::String) @ Main ./sysimg.jl:38 [22] top-level scope @ none:6 during initialization of module PyPlot in expression starting at /home/pkgeval/.julia/packages/BioMASS/X5Cnf/test/runtests.jl:1 caused by: PyError (PyImport_ImportModule The Python package matplotlib could not be imported by pyimport. Usually this means that you did not install matplotlib in the Python version being used by PyCall. PyCall is currently configured to use the Julia-specific Python distribution installed by the Conda.jl package. To install the matplotlib module, you can use `pyimport_conda("matplotlib", PKG)`, where PKG is the Anaconda package that contains the module matplotlib, or alternatively you can use the Conda package directly (via `using Conda` followed by `Conda.add` etcetera). Alternatively, if you want to use a different Python distribution on your system, such as a system-wide Python (as opposed to the Julia-specific Python), you can re-configure PyCall with that Python. As explained in the PyCall documentation, set ENV["PYTHON"] to the path/name of the python executable you want to use, run Pkg.build("PyCall"), and re-launch Julia. ) ModuleNotFoundError("No module named 'matplotlib'") Stacktrace: [1] pyimport(name::String) @ PyCall ~/.julia/packages/PyCall/1gn3u/src/PyCall.jl:558 [2] pyimport_conda(modulename::String, condapkg::String, channel::String) @ PyCall ~/.julia/packages/PyCall/1gn3u/src/PyCall.jl:716 [3] pyimport_conda @ ~/.julia/packages/PyCall/1gn3u/src/PyCall.jl:715 [inlined] [4] __init__() @ PyPlot ~/.julia/packages/PyPlot/G422O/src/init.jl:174 [5] run_module_init(mod::Module, i::Int64) @ Base ./loading.jl:1378 [6] register_restored_modules(sv::Core.SimpleVector, pkg::Base.PkgId, path::String) @ Base ./loading.jl:1366 [7] _include_from_serialized(pkg::Base.PkgId, path::String, ocachepath::Nothing, depmods::Vector{Any}, ignore_native::Nothing; register::Bool) @ Base ./loading.jl:1254 [8] _include_from_serialized (repeats 2 times) @ ./loading.jl:1210 [inlined] [9] _require_search_from_serialized(pkg::Base.PkgId, sourcepath::String, build_id::UInt128, stalecheck::Bool; reasons::Dict{String, Int64}, DEPOT_PATH::Vector{String}) @ Base ./loading.jl:2041 [10] _require(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2527 [11] __require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2388 [12] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [13] invoke_in_world @ ./essentials.jl:1086 [inlined] [14] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2375 [15] macro expansion @ ./loading.jl:2314 [inlined] [16] macro expansion @ ./lock.jl:273 [inlined] [17] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2271 [18] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [19] invoke_in_world @ ./essentials.jl:1086 [inlined] [20] require(into::Module, mod::Symbol) @ Base ./loading.jl:2260 [21] include(fname::String) @ Main ./sysimg.jl:38 [22] top-level scope @ none:6 Testing failed after 76.91s ERROR: LoadError: Package BioMASS errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2128 [3] test @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2011 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:481 [5] test(pkgs::Vector{Pkg.Types.PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:159 [6] test @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:147 [inlined] [7] #test#74 @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:146 [inlined] [8] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:223 in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 PkgEval failed after 1867.53s: package fails to precompile