Package evaluation to test AstroChemistry on Julia 1.11.8 (29b3528cce*) started at 2026-01-20T19:58:46.987 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.11` Set-up completed after 7.97s ################################################################################ # Installation # Installing AstroChemistry... Resolving package versions... Installed HDF5 ─ v0.15.7 Updating `~/.julia/environments/v1.11/Project.toml` [7f947402] + AstroChemistry v0.2.1 Updating `~/.julia/environments/v1.11/Manifest.toml` ⌅ [47edcb42] + ADTypes v0.2.7 ⌅ [c3fe647b] + AbstractAlgebra v0.34.7 [1520ce14] + AbstractTrees v0.4.5 ⌅ [79e6a3ab] + Adapt v3.7.2 [66dad0bd] + AliasTables v1.1.3 [ec485272] + ArnoldiMethod v0.4.0 ⌅ [4fba245c] + ArrayInterface v6.0.25 [30b0a656] + ArrayInterfaceCore v0.1.29 [6ba088a2] + ArrayInterfaceGPUArrays v0.2.2 [015c0d05] + ArrayInterfaceOffsetArrays v0.1.7 [b0d46f97] + ArrayInterfaceStaticArrays v0.1.5 [dd5226c6] + ArrayInterfaceStaticArraysCore v0.1.4 ⌃ [4c555306] + ArrayLayouts v0.8.19 [7f947402] + AstroChemistry v0.2.1 ⌅ [aae01518] + BandedMatrices v0.17.18 ⌅ [e2ed5e7c] + Bijections v0.1.10 [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 [a74b3585] + Blosc v0.7.3 ⌅ [764a87c0] + BoundaryValueDiffEq v2.11.0 ⌅ [fa961155] + CEnum v0.4.2 [3b1b4be9] + CFITSIO v1.7.2 ⌃ [2a0fbf3d] + CPUSummary v0.2.6 [00ebfdb7] + CSTParser v3.4.3 ⌃ [d360d2e6] + ChainRulesCore v1.25.2 ⌃ [fb6a15b2] + CloseOpenIntervals v0.1.11 [861a8166] + Combinatorics v1.1.0 ⌅ [a80b9123] + CommonMark v0.8.16 [38540f10] + CommonSolve v0.2.6 [bbf7d656] + CommonSubexpressions v0.3.1 ⌅ [34da2185] + Compat v3.47.0 [b152e2b5] + CompositeTypes v0.1.4 ⌅ [187b0558] + ConstructionBase v1.5.6 [adafc99b] + CpuId v0.3.1 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 ⌅ [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 ⌃ [bcd4f6db] + DelayDiffEq v5.41.1 [8bb1440f] + DelimitedFiles v1.9.1 ⌃ [2b5f629d] + DiffEqBase v6.119.0 ⌅ [459566f4] + DiffEqCallbacks v2.26.1 [5a0ffddc] + DiffEqFinancial v2.8.0 [c894b116] + DiffEqJump v8.6.3 [77a26b50] + DiffEqNoiseProcess v5.26.0 [055956cb] + DiffEqPhysics v3.15.1 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 ⌅ [0c46a032] + DifferentialEquations v6.21.0 [c619ae07] + DimensionalPlotRecipes v1.3.0 [b4f34e82] + Distances v0.10.12 [31c24e10] + Distributions v0.25.123 [ffbed154] + DocStringExtensions v0.9.5 ⌅ [5b8099bc] + DomainSets v0.6.7 ⌅ [7c1d4256] + DynamicPolynomials v0.5.7 [4e289a0a] + EnumX v1.0.5 ⌃ [d4d017d3] + ExponentialUtilities v1.23.0 [e2ba6199] + ExprTools v0.1.10 ⌅ [525bcba6] + FITSIO v0.16.13 ⌅ [7034ab61] + FastBroadcast v0.2.4 [9aa1b823] + FastClosures v0.3.2 ⌅ [29a986be] + FastLapackInterface v1.2.9 ⌅ [1a297f60] + FillArrays v0.13.11 ⌃ [6a86dc24] + FiniteDiff v2.17.0 [1fa38f19] + Format v1.3.7 ⌅ [f6369f11] + ForwardDiff v0.10.39 [069b7b12] + FunctionWrappers v1.1.3 [77dc65aa] + FunctionWrappersWrappers v0.1.3 ⌅ [46192b85] + GPUArraysCore v0.1.5 [c145ed77] + GenericSchur v0.5.6 [c27321d9] + Glob v1.4.0 ⌃ [86223c79] + Graphs v1.13.1 ⌅ [0b43b601] + Groebner v0.5.1 ⌅ [d5909c97] + GroupsCore v0.4.2 ⌅ [f67ccb44] + HDF5 v0.15.7 ⌅ [9f4e344d] + Healpix v2.3.0 [3e5b6fbb] + HostCPUFeatures v0.1.18 [34004b35] + HypergeometricFunctions v0.3.28 [615f187c] + IfElse v0.1.1 [d25df0c9] + Inflate v0.1.5 [18e54dd8] + IntegerMathUtils v0.1.3 [8197267c] + IntervalSets v0.7.13 [92d709cd] + IrrationalConstants v0.2.6 [42fd0dbc] + IterativeSolvers v0.9.4 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 ⌅ [98e50ef6] + JuliaFormatter v1.0.62 ⌃ [ccbc3e58] + JumpProcesses v9.5.1 ⌅ [ef3ab10e] + KLU v0.4.1 ⌅ [ba0b0d4f] + Krylov v0.9.10 ⌅ [0b1a1467] + KrylovKit v0.6.1 [b964fa9f] + LaTeXStrings v1.4.0 ⌃ [2ee39098] + LabelledArrays v1.13.0 ⌅ [984bce1d] + LambertW v0.4.6 [23fbe1c1] + Latexify v0.16.10 ⌃ [10f19ff3] + LayoutPointers v0.1.13 [50d2b5c4] + Lazy v0.15.1 [2d8b4e74] + LevyArea v1.0.0 ⌃ [d3d80556] + LineSearches v7.5.1 ⌅ [7ed4a6bd] + LinearSolve v1.37.0 [2ab3a3ac] + LogExpFunctions v0.3.29 ⌃ [bdcacae8] + LoopVectorization v0.12.150 [d8e11817] + MLStyle v0.4.17 [1914dd2f] + MacroTools v0.5.16 [d125e4d3] + ManualMemory v0.1.8 [e1d29d7a] + Missings v1.2.0 ⌅ [961ee093] + ModelingToolkit v8.70.0 [46d2c3a1] + MuladdMacro v0.2.4 ⌃ [f9640e96] + MultiScaleArrays v1.14.0 ⌃ [102ac46a] + MultivariatePolynomials v0.5.9 [d8a4904e] + MutableArithmetics v1.6.7 ⌅ [d41bc354] + NLSolversBase v7.8.3 [2774e3e8] + NLsolve v4.5.1 [77ba4419] + NaNMath v1.1.3 ⌅ [8913a72c] + NonlinearSolve v1.6.0 [6fe1bfb0] + OffsetArrays v1.17.0 [bac558e1] + OrderedCollections v1.8.1 ⌃ [1dea7af3] + OrdinaryDiffEq v6.44.1 [90014a1f] + PDMats v0.11.37 ⌃ [65888b18] + ParameterizedFunctions v5.16.0 [d96e819e] + Parameters v0.12.3 [e409e4f3] + PoissonRandom v0.4.7 ⌃ [f517fe37] + Polyester v0.7.2 [1d0040c9] + PolyesterWeave v0.2.2 ⌅ [d236fae5] + PreallocationTools v0.4.11 ⌅ [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.5.1 ⌅ [08abe8d2] + PrettyTables v2.4.0 [27ebfcd6] + Primes v0.5.7 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [74087812] + Random123 v1.7.1 [fb686558] + RandomExtensions v0.4.4 [e6cf234a] + RandomNumbers v1.6.0 [3cdcf5f2] + RecipesBase v1.3.4 ⌅ [731186ca] + RecursiveArrayTools v2.37.0 ⌃ [f2c3362d] + RecursiveFactorization v0.2.22 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [ae5879a3] + ResettableStacks v1.2.0 [79098fc4] + Rmath v0.9.0 [7e49a35a] + RuntimeGeneratedFunctions v0.5.16 [fdea26ae] + SIMD v3.7.2 [94e857df] + SIMDTypes v0.1.0 [476501e8] + SLEEFPirates v0.6.43 ⌅ [0bca4576] + SciMLBase v1.97.0 [e9a6253c] + SciMLNLSolve v0.1.9 ⌅ [c0aeaf25] + SciMLOperators v0.1.21 [efcf1570] + Setfield v1.1.2 ⌅ [727e6d20] + SimpleNonlinearSolve v0.1.14 [699a6c99] + SimpleTraits v0.9.5 [ce78b400] + SimpleUnPack v1.1.0 [66db9d55] + SnoopPrecompile v1.0.3 [a2af1166] + SortingAlgorithms v1.2.2 ⌅ [47a9eef4] + SparseDiffTools v1.30.0 [e56a9233] + Sparspak v0.3.14 [276daf66] + SpecialFunctions v2.6.1 ⌅ [aedffcd0] + Static v0.8.10 [90137ffa] + StaticArrays v1.9.16 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 [2913bbd2] + StatsBase v0.34.10 [4c63d2b9] + StatsFuns v1.5.2 ⌅ [9672c7b4] + SteadyStateDiffEq v1.13.0 ⌃ [789caeaf] + StochasticDiffEq v6.58.0 ⌅ [7792a7ef] + StrideArraysCore v0.4.7 [892a3eda] + StringManipulation v0.4.2 ⌅ [c3572dad] + Sundials v4.15.1 ⌅ [2efcf032] + SymbolicIndexingInterface v0.2.2 ⌅ [d1185830] + SymbolicUtils v1.4.0 ⌅ [0c5d862f] + Symbolics v5.11.0 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [8290d209] + ThreadingUtilities v0.5.5 [a759f4b9] + TimerOutputs v0.5.29 [0796e94c] + Tokenize v0.5.29 [a2a6695c] + TreeViews v0.3.0 ⌅ [d5829a12] + TriangularSolve v0.1.21 [410a4b4d] + Tricks v0.1.13 [781d530d] + TruncatedStacktraces v1.4.0 [5c2747f8] + URIs v1.6.1 [3a884ed6] + UnPack v1.0.2 [1986cc42] + Unitful v1.27.0 [a7c27f48] + Unityper v0.1.6 ⌃ [3d5dd08c] + VectorizationBase v0.21.58 [19fa3120] + VertexSafeGraphs v0.2.0 [700de1a5] + ZygoteRules v0.2.7 [0b7ba130] + Blosc_jll v1.21.7+0 [6e34b625] + Bzip2_jll v1.0.9+0 [b3e40c51] + CFITSIO_jll v4.6.2+0 [61579ee1] + Ghostscript_jll v9.55.1+0 ⌅ [0234f1f7] + HDF5_jll v1.12.2+2 [aacddb02] + JpegTurbo_jll v3.1.4+0 [5ced341a] + Lz4_jll v1.10.1+0 ⌅ [458c3c95] + OpenSSL_jll v1.1.23+1 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 ⌅ [fb77eaff] + Sundials_jll v5.2.3+0 [3161d3a3] + Zstd_jll v1.5.7+1 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.6.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.11.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.2.0 [44cfe95a] + Pkg v1.11.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.11.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] + LibCURL_jll v8.6.0+0 [e37daf67] + LibGit2_jll v1.7.2+0 [29816b5a] + LibSSH2_jll v1.11.0+1 [c8ffd9c3] + MbedTLS_jll v2.28.6+0 [14a3606d] + MozillaCACerts_jll v2023.12.12 [4536629a] + OpenBLAS_jll v0.3.27+1 [05823500] + OpenLibm_jll v0.8.5+0 [bea87d4a] + SuiteSparse_jll v7.7.0+0 [83775a58] + Zlib_jll v1.2.13+1 [8e850b90] + libblastrampoline_jll v5.11.0+0 [8e850ede] + nghttp2_jll v1.59.0+0 [3f19e933] + p7zip_jll v17.4.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Building HDF5 → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/698c099c6613d7b7f151832868728f426abe698b/build.log` Installation completed after 16.41s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompiling project... 53497.7 ms ✓ JuliaFormatter 7729.3 ms ✓ KrylovKit 10645.7 ms ✓ MultivariatePolynomials 55531.1 ms ✓ SciMLBase ✗ VectorizationBase 50258.3 ms ✓ LabelledArrays 37788.3 ms ✓ SparseDiffTools 23412.9 ms ✓ Distributions 7361.6 ms ✓ DynamicPolynomials ✗ Groebner 100773.3 ms ✓ DiffEqBase ✗ SLEEFPirates 9827.0 ms ✓ Distributions → DistributionsTestExt 9818.6 ms ✓ Distributions → DistributionsChainRulesCoreExt 70992.9 ms ✓ SymbolicUtils 75861.7 ms ✓ DiffEqBase → DiffEqBaseUnitfulExt 171112.5 ms ✓ DiffEqBase → DiffEqBaseDistributionsExt 70320.5 ms ✓ SciMLNLSolve 13167.0 ms ✓ BoundaryValueDiffEq 15299.3 ms ✓ SimpleNonlinearSolve 14095.9 ms ✓ JumpProcesses 12671.8 ms ✓ DiffEqCallbacks 37704.2 ms ✓ Sundials 14551.3 ms ✓ DiffEqJump ✗ LoopVectorization ✗ Symbolics 270380.2 ms ✓ DiffEqNoiseProcess 10902.7 ms ✓ DiffEqPhysics 45118.2 ms ✓ SteadyStateDiffEq ✗ LoopVectorization → SpecialFunctionsExt ✗ LoopVectorization → ForwardDiffExt ✗ TriangularSolve 14773.4 ms ✓ DiffEqFinancial ✗ RecursiveFactorization ✗ LinearSolve ✗ NonlinearSolve ✗ OrdinaryDiffEq ✗ DelayDiffEq ✗ ModelingToolkit ✗ StochasticDiffEq ✗ ParameterizedFunctions ✗ MultiScaleArrays ✗ MultiScaleArrays → MultiScaleArraysSparseDiffToolsExt ✗ DifferentialEquations ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 13 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:522 poptask at ./task.jl:1012 wait at ./task.jl:1021 #wait#733 at ./condition.jl:130 wait at ./condition.jl:125 [inlined] #copyuntil#835 at ./stream.jl:1046 copyuntil at ./stream.jl:1030 [inlined] #copyuntil#466 at ./io.jl:464 [inlined] copyuntil at ./io.jl:464 [inlined] #copyline#524 at ./iobuffer.jl:597 [inlined] copyline at ./iobuffer.jl:596 [inlined] #readline#490 at ./io.jl:619 readline at ./io.jl:619 [inlined] monitor_std#18 at ./precompilation.jl:747 monitor_std at ./precompilation.jl:742 jfptr_monitor_std_45082.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 #30 at ./precompilation.jl:907 jfptr_YY.30_72004.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 jl_apply at /source/src/julia.h:2157 [inlined] start_task at /source/src/task.c:1204 unknown function (ip: (nil)) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.11/Profile/src/Profile.jl:1240 Overhead ╎ [+additional indent] Count File:Line; Function ========================================================= Thread 1 Task 0x000074d5c9900c90 Total snapshots: 135. Utilization: 0% ╎135 @Base/precompilation.jl:907; (::Base.Precompilation.var"#30#70"{Pipe, B… ╎ 135 @Base/precompilation.jl:742; kwcall(::@NamedTuple{single_requested_pkg… ╎ 135 …ase/precompilation.jl:746; (::Base.Precompilation.var"#monitor_std#5… ╎ 135 @Base/io.jl:472; eof ╎ 135 @Base/stream.jl:106; eof(s::Base.PipeEndpoint) ╎ 135 @Base/stream.jl:416; wait_readnb(x::Base.PipeEndpoint, nb::Int64) ╎ ╎ 135 @Base/condition.jl:125; wait ╎ ╎ 135 @Base/condition.jl:130; wait(c::Base.GenericCondition{Base.Threa… ╎ ╎ 135 @Base/task.jl:1021; wait() 134╎ ╎ 135 @Base/task.jl:1012; poptask(W::Base.IntrusiveLinkedListSynchro… ✗ AstroChemistry 25 dependencies successfully precompiled in 2706 seconds. 223 already precompiled. 5 dependencies had output during precompilation: ┌ SciMLNLSolve │ ┌ Warning: Replacing docs for `SciMLOperators.AbstractSciMLOperator :: Union{}` in module `SciMLOperators` │ └ @ Base.Docs docs/Docs.jl:243 └ ┌ SciMLBase │ ┌ Warning: Replacing docs for `SciMLOperators.AbstractSciMLOperator :: Union{}` in module `SciMLOperators` │ └ @ Base.Docs docs/Docs.jl:243 └ ┌ DiffEqBase → DiffEqBaseDistributionsExt │ ┌ Warning: Replacing docs for `SciMLOperators.AbstractSciMLOperator :: Union{}` in module `SciMLOperators` │ └ @ Base.Docs docs/Docs.jl:243 └ ┌ DiffEqJump │ WARNING: method definition for #MassActionJump#8 at /home/pkgeval/.julia/packages/DiffEqJump/o61Dj/src/jumps.jl:251 declares type variable U but does not use it. │ WARNING: method definition for #MassActionJump#8 at /home/pkgeval/.julia/packages/DiffEqJump/o61Dj/src/jumps.jl:251 declares type variable S but does not use it. │ WARNING: method definition for #MassActionJump#9 at /home/pkgeval/.julia/packages/DiffEqJump/o61Dj/src/jumps.jl:256 declares type variable U but does not use it. │ WARNING: method definition for #MassActionJump#9 at /home/pkgeval/.julia/packages/DiffEqJump/o61Dj/src/jumps.jl:256 declares type variable S but does not use it. │ WARNING: method definition for #RDirectJumpAggregation#62 at /home/pkgeval/.julia/packages/DiffEqJump/o61Dj/src/aggregators/rdirect.jl:23 declares type variable DEPGR but does not use it. └ ┌ DiffEqNoiseProcess │ ┌ Warning: Replacing docs for `SciMLOperators.AbstractSciMLOperator :: Union{}` in module `SciMLOperators` │ └ @ Base.Docs docs/Docs.jl:243 └ ERROR: LoadError: The following 2 direct dependencies failed to precompile: AstroChemistry Failed to precompile AstroChemistry [7f947402-6d9b-49de-a6e7-82c660dce669] to "/home/pkgeval/.julia/compiled/v1.11/AstroChemistry/jl_MTpP8z". ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 821 running 1 of 1 signal (10): User defined signal 1 has_concrete_supertype at /source/src/jltypes.c:1281 has_concrete_supertype at /source/src/jltypes.c:1285 has_concrete_supertype at /source/src/jltypes.c:1285 jl_type_equality_is_identity at /source/src/jltypes.c:1321 obviously_unequal at /source/src/subtype.c:461 ijl_types_equal at /source/src/subtype.c:2314 jl_specializations_get_linfo_ at /source/src/gf.c:224 jl_restore_system_image_from_stream_ at /source/src/staticdata.c:3470 jl_restore_package_image_from_stream at /source/src/staticdata.c:3671 ijl_restore_incremental at /source/src/staticdata.c:3743 #_include_from_serialized#1082 at ./loading.jl:1248 _include_from_serialized at ./loading.jl:1210 [inlined] _include_from_serialized at ./loading.jl:1210 [inlined] #_require_search_from_serialized#1105 at ./loading.jl:2041 _require_search_from_serialized at ./loading.jl:1969 jfptr__require_search_from_serialized_45031.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 _require at ./loading.jl:2527 __require_prelocked at ./loading.jl:2388 jfptr___require_prelocked_71351.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 jl_apply at /source/src/julia.h:2157 [inlined] jl_f__call_in_world at /source/src/builtins.c:894 #invoke_in_world#3 at ./essentials.jl:1089 [inlined] invoke_in_world at ./essentials.jl:1086 [inlined] _require_prelocked at ./loading.jl:2375 macro expansion at ./loading.jl:2314 [inlined] macro expansion at ./lock.jl:273 [inlined] __require at ./loading.jl:2271 jfptr___require_71282.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 jl_apply at /source/src/julia.h:2157 [inlined] jl_f__call_in_world at /source/src/builtins.c:894 #invoke_in_world#3 at ./essentials.jl:1089 [inlined] invoke_in_world at ./essentials.jl:1086 [inlined] require at ./loading.jl:2260 jfptr_require_71279.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 jl_apply at /source/src/julia.h:2157 [inlined] call_require at /source/src/toplevel.c:486 [inlined] eval_import_path at /source/src/toplevel.c:523 jl_toplevel_eval_flex at /source/src/toplevel.c:759 jl_toplevel_eval_flex at /source/src/toplevel.c:886 jl_eval_module_expr at /source/src/toplevel.c:215 [inlined] jl_toplevel_eval_flex at /source/src/toplevel.c:743 jl_toplevel_eval_flex at /source/src/toplevel.c:886 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 [inlined] include_string at ./loading.jl:2777 _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 _include at ./loading.jl:2837 include at ./Base.jl:562 [inlined] include_package_for_output at ./loading.jl:2924 jfptr_include_package_for_output_72286.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 jl_apply at /source/src/julia.h:2157 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_stmt_value at /source/src/interpreter.c:174 [inlined] eval_body at /source/src/interpreter.c:670 jl_interpret_toplevel_thunk at /source/src/interpreter.c:824 jl_toplevel_eval_flex at /source/src/toplevel.c:943 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 [inlined] include_string at ./loading.jl:2777 include_string at ./loading.jl:2787 [inlined] exec_options at ./client.jl:314 _start at ./client.jl:524 jfptr__start_73686.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 jl_apply at /source/src/julia.h:2157 [inlined] true_main at /source/src/jlapi.c:900 jl_repl_entrypoint at /source/src/jlapi.c:1059 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x72cbff43f249) __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) unknown function (ip: (nil)) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 817 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:522 poptask at ./task.jl:1012 wait at ./task.jl:1021 #wait#733 at ./condition.jl:130 wait at ./condition.jl:125 [inlined] _trywait at ./asyncevent.jl:145 #818 at ./asyncevent.jl:311 jfptr_YY.818_67287.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 jl_apply at /source/src/julia.h:2157 [inlined] start_task at /source/src/task.c:1204 unknown function (ip: (nil)) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 813 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:522 poptask at ./task.jl:1012 wait at ./task.jl:1021 julia: /source/src/method.c:374: jl_code_info_set_ir: Assertion `(((jl_array_t*)(((jl_expr_t*)(ma))->args))->dimsize[0]) == 0' failed. [829] signal 6 (-6): Aborted in expression starting at none:1 unknown function (ip: 0x7bef8781eebc) gsignal at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) abort at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x7bef877ba394) __assert_fail at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) jl_code_info_set_ir at /source/src/method.c:374 jl_new_code_info_from_ir at /source/src/method.c:557 scm_to_julia_ at /source/src/ast.c:656 scm_to_julia_ at /source/src/ast.c:652 #wait#733 at ./condition.jl:130 scm_to_julia_ at /source/src/ast.c:652 scm_to_julia_ at /source/src/ast.c:652 scm_to_julia_ at /source/src/ast.c:652 scm_to_julia at /source/src/ast.c:474 ijl_expand_with_loc_warn at /source/src/ast.c:1321 jl_toplevel_eval_flex at /source/src/toplevel.c:737 ijl_toplevel_eval_in at /source/src/toplevel.c:994 wait at ./condition.jl:125 [inlined] _trywait at ./asyncevent.jl:145 #818 at ./asyncevent.jl:311 eval at ./boot.jl:430 jfptr_YY.818_67287.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 jl_apply at /source/src/julia.h:2157 [inlined] start_task at /source/src/task.c:1204 unknown function (ip: (nil)) jfptr_eval_28361.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 jl_apply at /source/src/julia.h:2157 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_stmt_value at /source/src/interpreter.c:174 [inlined] eval_body at /source/src/interpreter.c:670 jl_interpret_toplevel_thunk at /source/src/interpreter.c:824 jl_toplevel_eval_flex at /source/src/toplevel.c:943 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 [inlined] include_string at ./loading.jl:2777 _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 _include at ./loading.jl:2837 include at ./Base.jl:562 jfptr_include_47030.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 jl_apply at /source/src/julia.h:2157 [inlined] jl_f__call_latest at /source/src/builtins.c:875 include at /home/pkgeval/.julia/packages/VectorizationBase/G9NJI/src/VectorizationBase.jl:1 unknown function (ip: 0x7bef7ed09c42) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 jl_apply at /source/src/julia.h:2157 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_stmt_value at /source/src/interpreter.c:174 [inlined] eval_body at /source/src/interpreter.c:670 jl_interpret_toplevel_thunk at /source/src/interpreter.c:824 jl_toplevel_eval_flex at /source/src/toplevel.c:943 jl_eval_module_expr at /source/src/toplevel.c:215 [inlined] jl_toplevel_eval_flex at /source/src/toplevel.c:743 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 [inlined] include_string at ./loading.jl:2777 _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 _include at ./loading.jl:2837 include at ./Base.jl:562 [inlined] include_package_for_output at ./loading.jl:2924 jfptr_include_package_for_output_72286.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 jl_apply at /source/src/julia.h:2157 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_stmt_value at /source/src/interpreter.c:174 [inlined] eval_body at /source/src/interpreter.c:670 jl_interpret_toplevel_thunk at /source/src/interpreter.c:824 jl_toplevel_eval_flex at /source/src/toplevel.c:943 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 [inlined] include_string at ./loading.jl:2777 include_string at ./loading.jl:2787 [inlined] exec_options at ./client.jl:314 ============================================================== Profile collected. A report will print at the next yield point ============================================================== _start at ./client.jl:524 jfptr__start_73686.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 jl_apply at /source/src/julia.h:2157 [inlined] true_main at /source/src/jlapi.c:900 jl_repl_entrypoint at /source/src/jlapi.c:1059 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x7bef877bb249) __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) Allocations: 2216655 (Pool: 2216556; Big: 99); GC: 4 ERROR: LoadError: Failed to precompile VectorizationBase [3d5dd08c-fd9d-11e8-17fa-ed2836048c2f] to "/home/pkgeval/.julia/compiled/v1.11/VectorizationBase/jl_3xxbDM". Stacktrace: [1] error(s::String) @ Base ./error.jl:35 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3217 [3] (::Base.var"#1110#1111"{Base.PkgId})() @ Base ./loading.jl:2579 [4] mkpidlock(f::Base.var"#1110#1111"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:95 [5] #mkpidlock#6 @ /opt/julia/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:90 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:116 [7] #invokelatest#2 @ ./essentials.jl:1057 [inlined] [8] invokelatest @ ./essentials.jl:1052 [inlined] [9] maybe_cachefile_lock(f::Base.var"#1110#1111"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3741 [10] maybe_cachefile_lock @ ./loading.jl:3738 [inlined] [11] _require(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2565 [12] __require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2388 [13] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [14] invoke_in_world @ ./essentials.jl:1086 [inlined] [15] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2375 [16] macro expansion @ ./loading.jl:2314 [inlined] [17] macro expansion @ ./lock.jl:273 [inlined] [18] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2271 [19] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [20] invoke_in_world @ ./essentials.jl:1086 [inlined] [21] require(into::Module, mod::Symbol) @ Base ./loading.jl:2260 [22] include @ ./Base.jl:562 [inlined] [23] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:2924 [24] top-level scope @ stdin:6 in expression starting at /home/pkgeval/.julia/packages/LoopVectorization/XbdFG/src/LoopVectorization.jl:1 in expression starting at stdin:6 ERROR: ┌ Error: Profile printing listener crashed │ exception = │ This interactive function requires a stdlib to be loaded, and package code should instead use it directly from that stdlib. │ Stacktrace: │ [1] error(s::String) │ @ Base ./error.jl:35 │ [2] require_stdlib(package_uuidkey::Base.PkgId, ext::Nothing, from::Module) │ @ Base ./loading.jl:2687 │ [3] require_stdlib │ @ ./loading.jl:2683 [inlined] │ [4] macro expansion │ @ ./some.jl:158 [inlined] │ [5] profile_printing_listener(cond::Base.AsyncCondition) │ @ Base ./Base.jl:583 │ [6] (::Base.var"#1192#1195"{Base.AsyncCondition})() │ @ Base ./Base.jl:622 └ @ Base Base.jl:593 LoadError: ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 809 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:522 poptask at ./task.jl:1012 wait at ./task.jl:1021 #wait#733 at ./condition.jl:130 wait at ./condition.jl:125 [inlined] _trywait at ./asyncevent.jl:145 #818 at ./asyncevent.jl:311 Failed to precompile LoopVectorization [bdcacae8-1622-11e9-2a5c-532679323890] to "/home/pkgeval/.julia/compiled/v1.11/LoopVectorization/jl_awTda9". Stacktrace: [1] error(s::String) @ Base ./error.jl:35 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3217 [3] (::Base.var"#1110#1111"{Base.PkgId})() @ Base ./loading.jl:2579 [4] mkpidlock(f::Base.var"#1110#1111"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:95 [5] #mkpidlock#6 @ /opt/julia/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:90jfptr_YY.818_67287.1 at /opt/julia/lib/julia/sys.so (unknown line) [inlined] [6] _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 jl_apply at /source/src/julia.h:2157 [inlined] start_task at /source/src/task.c:1204 unknown function (ip: (nil)) trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:116 [7] #invokelatest#2 @ ./essentials.jl:1057 [inlined] [8] invokelatest @ ./essentials.jl:1052 [inlined] [9] maybe_cachefile_lock(f::Base.var"#1110#1111"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3741 [10] maybe_cachefile_lock @ ./loading.jl:3738 [inlined] [11] _require(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2565 [12] __require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2388 [13] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [14] invoke_in_world @ ./essentials.jl:1086 [inlined] [15] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2375 [16] macro expansion @ ./loading.jl:2314 [inlined] [17] macro expansion @ ./lock.jl:273 [inlined] [18] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2271 [19] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [20] invoke_in_world @ ./essentials.jl:1086 [inlined] [21] require(into::Module, mod::Symbol) @ Base ./loading.jl:2260 [22] include @ ./Base.jl:562 [inlined] [23] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:2924 [24] top-level scope @ stdin:6 in expression starting at /home/pkgeval/.julia/packages/OrdinaryDiffEq/vIqLB/src/OrdinaryDiffEq.jl:1 in expression starting at stdin:6 ============================================================== Profile collected. A report will print at the next yield point ============================================================== ERROR: ┌ Error: Profile printing listener crashed │ exception = │ This interactive function requires a stdlib to be loaded, and package code should instead use it directly from that stdlib. │ Stacktrace: │ [1] error(s::String) │ @ Base ./error.jl:35 │ [2] require_stdlib(package_uuidkey::Base.PkgId, ext::Nothing, from::Module) │ @ Base ./loading.jl:2687 │ [3] require_stdlib │ @ ./loading.jl:2683 [inlined] │ [4] macro expansion │ @ ./some.jl:158 [inlined] │ [5] profile_printing_listener(cond::Base.AsyncCondition) │ @ Base ./Base.jl:583 │ [6] (::Base.var"#1192#1195"{Base.AsyncCondition})() │ @ Base ./Base.jl:622 └ @ Base Base.jl:593 LoadError: Failed to precompile OrdinaryDiffEq [1dea7af3-3e70-54e6-95c3-0bf5283fa5ed] to "/home/pkgeval/.julia/compiled/v1.11/OrdinaryDiffEq/jl_cJEwVU". Stacktrace: [1] error(s::String) @ Base ./error.jl:35 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3217 [3] (::Base.var"#1110#1111"{Base.PkgId})() @ Base ./loading.jl:2579 [4] mkpidlock(f::Base.var"#1110#1111"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:95 [5] #mkpidlock#6 @ /opt/julia/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:90 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:116 [7] #invokelatest#2 @ ./essentials.jl:1057 [inlined] [8] invokelatest @ ./essentials.jl:1052 [inlined] [9] maybe_cachefile_lock(f::Base.var"#1110#1111"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3741 [10] maybe_cachefile_lock @ ./loading.jl:3738 [inlined] [11] _require(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2565 [12] __require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2388 [13] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [14] invoke_in_world @ ./essentials.jl:1086 [inlined] [15] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2375 [16] macro expansion @ ./loading.jl:2314 [inlined] [17] macro expansion @ ./lock.jl:273 [inlined] [18] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2271 [19] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [20] invoke_in_world @ ./essentials.jl:1086 [inlined] [21] require(into::Module, mod::Symbol) @ Base ./loading.jl:2260 [22] include @ ./Base.jl:562 [inlined] [23] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:2924 [24] top-level scope @ stdin:6 in expression starting at /home/pkgeval/.julia/packages/StochasticDiffEq/0PuS7/src/StochasticDiffEq.jl:1 in expression starting at stdin:6 ERROR: ┌ Error: Profile printing listener crashed │ exception = │ This interactive function requires a stdlib to be loaded, and package code should instead use it directly from that stdlib. │ Stacktrace: │ [1] error(s::String) │ @ Base ./error.jl:35 │ [2] require_stdlib(package_uuidkey::Base.PkgId, ext::Nothing, from::Module) │ @ Base ./loading.jl:2687 │ [3] require_stdlib │ @ ./loading.jl:2683 [inlined] │ [4] macro expansion │ @ ./some.jl:158 [inlined] │ [5] profile_printing_listener(cond::Base.AsyncCondition) │ @ Base ./Base.jl:583 │ [6] (::Base.var"#1192#1195"{Base.AsyncCondition})() │ @ Base ./Base.jl:622 └ @ Base Base.jl:593 LoadError: Failed to precompile StochasticDiffEq [789caeaf-c7a9-5a7d-9973-96adeb23e2a0] to "/home/pkgeval/.julia/compiled/v1.11/StochasticDiffEq/jl_egd9FI". Stacktrace: [1] error(s::String) @ Base ./error.jl:35 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3217 [3] (::Base.var"#1110#1111"{Base.PkgId})() @ Base ./loading.jl:2579 [4] mkpidlock(f::Base.var"#1110#1111"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:95 [5] #mkpidlock#6 @ /opt/julia/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:90 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:116 [7] #invokelatest#2 @ ./essentials.jl:1057 [inlined] [8] invokelatest @ ./essentials.jl:1052 [inlined] [9] maybe_cachefile_lock(f::Base.var"#1110#1111"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3741 [10] maybe_cachefile_lock @ ./loading.jl:3738 [inlined] [11] _require(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2565 [12] __require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2388 [13] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [14] invoke_in_world @ ./essentials.jl:1086 [inlined] [15] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2375 [16] macro expansion @ ./loading.jl:2314 [inlined] [17] macro expansion @ ./lock.jl:273 [inlined] [18] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2271 [19] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [20] invoke_in_world @ ./essentials.jl:1086 [inlined] [21] require(into::Module, mod::Symbol) @ Base ./loading.jl:2260 [22] include @ ./Base.jl:562 [inlined] [23] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:2924 [24] top-level scope @ stdin:6 in expression starting at /home/pkgeval/.julia/packages/DifferentialEquations/jMNGA/src/DifferentialEquations.jl:1 in expression starting at stdin:6 ERROR: ┌ Error: Profile printing listener crashed │ exception = │ This interactive function requires a stdlib to be loaded, and package code should instead use it directly from that stdlib. │ Stacktrace: │ [1] error(s::String) │ @ Base ./error.jl:35 │ [2] require_stdlib(package_uuidkey::Base.PkgId, ext::Nothing, from::Module) │ @ Base ./loading.jl:2687 │ [3] require_stdlib │ @ ./loading.jl:2683 [inlined] │ [4] macro expansion │ @ ./some.jl:158 [inlined] │ [5] profile_printing_listener(cond::Base.AsyncCondition) │ @ Base ./Base.jl:583 │ [6] (::Base.var"#1192#1195"{Base.AsyncCondition})() │ @ Base ./Base.jl:622 └ @ Base Base.jl:593 LoadError: Failed to precompile DifferentialEquations [0c46a032-eb83-5123-abaf-570d42b7fbaa] to "/home/pkgeval/.julia/compiled/v1.11/DifferentialEquations/jl_x017jW". Stacktrace: [1] error(s::String) @ Base ./error.jl:35 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3217 [3] (::Base.var"#1110#1111"{Base.PkgId})() @ Base ./loading.jl:2579 [4] mkpidlock(f::Base.var"#1110#1111"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:95 [5] #mkpidlock#6 @ /opt/julia/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:90 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:116 [7] #invokelatest#2 @ ./essentials.jl:1057 [inlined] [8] invokelatest @ ./essentials.jl:1052 [inlined] [9] maybe_cachefile_lock(f::Base.var"#1110#1111"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3741 [10] maybe_cachefile_lock @ ./loading.jl:3738 [inlined] [11] _require(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2565 [12] __require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2388 [13] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [14] invoke_in_world @ ./essentials.jl:1086 [inlined] [15] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2375 [16] macro expansion @ ./loading.jl:2314 [inlined] [17] macro expansion @ ./lock.jl:273 [inlined] [18] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2271 [19] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [20] invoke_in_world @ ./essentials.jl:1086 [inlined] [21] require(into::Module, mod::Symbol) @ Base ./loading.jl:2260 [22] include @ ./Base.jl:562 [inlined] [23] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:2924 [24] top-level scope @ stdin:6 in expression starting at /home/pkgeval/.julia/packages/AstroChemistry/NqpZa/src/AstroChemistry.jl:1 in expression starting at stdin:6 DifferentialEquations Failed to precompile DifferentialEquations [0c46a032-eb83-5123-abaf-570d42b7fbaa] to "/home/pkgeval/.julia/compiled/v1.11/DifferentialEquations/jl_bu97wf". julia: /source/src/method.c:374: jl_code_info_set_ir: Assertion `(((jl_array_t*)(((jl_expr_t*)(ma))->args))->dimsize[0]) == 0' failed. [805] signal 6 (-6): Aborted in expression starting at none:1 unknown function (ip: 0x7cfcb2ce8ebc) gsignal at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) abort at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x7cfcb2c84394) __assert_fail at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) jl_code_info_set_ir at /source/src/method.c:374 jl_new_code_info_from_ir at /source/src/method.c:557 scm_to_julia_ at /source/src/ast.c:656 scm_to_julia_ at /source/src/ast.c:652 scm_to_julia_ at /source/src/ast.c:652 scm_to_julia_ at /source/src/ast.c:652 scm_to_julia_ at /source/src/ast.c:652 scm_to_julia at /source/src/ast.c:474 ijl_expand_with_loc_warn at /source/src/ast.c:1321 jl_toplevel_eval_flex at /source/src/toplevel.c:737 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 jfptr_eval_28361.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 jl_apply at /source/src/julia.h:2157 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_stmt_value at /source/src/interpreter.c:174 [inlined] eval_body at /source/src/interpreter.c:670 jl_interpret_toplevel_thunk at /source/src/interpreter.c:824 jl_toplevel_eval_flex at /source/src/toplevel.c:943 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 [inlined] include_string at ./loading.jl:2777 _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 _include at ./loading.jl:2837 include at ./Base.jl:562 jfptr_include_47030.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 jl_apply at /source/src/julia.h:2157 [inlined] jl_f__call_latest at /source/src/builtins.c:875 include at /home/pkgeval/.julia/packages/VectorizationBase/G9NJI/src/VectorizationBase.jl:1 unknown function (ip: 0x7cfcaa109c42) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 jl_apply at /source/src/julia.h:2157 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_stmt_value at /source/src/interpreter.c:174 [inlined] eval_body at /source/src/interpreter.c:670 jl_interpret_toplevel_thunk at /source/src/interpreter.c:824 jl_toplevel_eval_flex at /source/src/toplevel.c:943 jl_eval_module_expr at /source/src/toplevel.c:215 [inlined] jl_toplevel_eval_flex at /source/src/toplevel.c:743 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 [inlined] include_string at ./loading.jl:2777 _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 _include at ./loading.jl:2837 include at ./Base.jl:562 [inlined] include_package_for_output at ./loading.jl:2924 jfptr_include_package_for_output_72286.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 jl_apply at /source/src/julia.h:2157 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_stmt_value at /source/src/interpreter.c:174 [inlined] eval_body at /source/src/interpreter.c:670 jl_interpret_toplevel_thunk at /source/src/interpreter.c:824 jl_toplevel_eval_flex at /source/src/toplevel.c:943 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 [inlined] include_string at ./loading.jl:2777 include_string at ./loading.jl:2787 [inlined] exec_options at ./client.jl:314 _start at ./client.jl:524 jfptr__start_73686.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 jl_apply at /source/src/julia.h:2157 [inlined] true_main at /source/src/jlapi.c:900 jl_repl_entrypoint at /source/src/jlapi.c:1059 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x7cfcb2c85249) __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) Allocations: 2223834 (Pool: 2223735; Big: 99); GC: 4 ERROR: LoadError: Failed to precompile VectorizationBase [3d5dd08c-fd9d-11e8-17fa-ed2836048c2f] to "/home/pkgeval/.julia/compiled/v1.11/VectorizationBase/jl_zyAlXk". Stacktrace: [1] error(s::String) @ Base ./error.jl:35 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3217 [3] (::Base.var"#1110#1111"{Base.PkgId})() @ Base ./loading.jl:2579 [4] mkpidlock(f::Base.var"#1110#1111"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:95 [5] #mkpidlock#6 @ /opt/julia/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:90 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:116 [7] #invokelatest#2 @ ./essentials.jl:1057 [inlined] [8] invokelatest @ ./essentials.jl:1052 [inlined] [9] maybe_cachefile_lock(f::Base.var"#1110#1111"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3741 [10] maybe_cachefile_lock @ ./loading.jl:3738 [inlined] [11] _require(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2565 [12] __require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2388 [13] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [14] invoke_in_world @ ./essentials.jl:1086 [inlined] [15] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2375 [16] macro expansion @ ./loading.jl:2314 [inlined] [17] macro expansion @ ./lock.jl:273 [inlined] [18] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2271 [19] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [20] invoke_in_world @ ./essentials.jl:1086 [inlined] [21] require(into::Module, mod::Symbol) @ Base ./loading.jl:2260 [22] include @ ./Base.jl:562 [inlined] [23] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:2924 [24] top-level scope @ stdin:6 in expression starting at /home/pkgeval/.julia/packages/LoopVectorization/XbdFG/src/LoopVectorization.jl:1 in expression starting at stdin:6 ERROR: LoadError: Failed to precompile LoopVectorization [bdcacae8-1622-11e9-2a5c-532679323890] to "/home/pkgeval/.julia/compiled/v1.11/LoopVectorization/jl_Gja0pQ". Stacktrace: [1] error(s::String) @ Base ./error.jl:35 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3217 [3] (::Base.var"#1110#1111"{Base.PkgId})() @ Base ./loading.jl:2579 [4] mkpidlock(f::Base.var"#1110#1111"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:95 [5] #mkpidlock#6 @ /opt/julia/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:90 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:116 [7] #invokelatest#2 @ ./essentials.jl:1057 [inlined] [8] invokelatest @ ./essentials.jl:1052 [inlined] [9] maybe_cachefile_lock(f::Base.var"#1110#1111"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3741 [10] maybe_cachefile_lock @ ./loading.jl:3738 [inlined] [11] _require(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2565 [12] __require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2388 [13] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [14] invoke_in_world @ ./essentials.jl:1086 [inlined] [15] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2375 [16] macro expansion @ ./loading.jl:2314 [inlined] [17] macro expansion @ ./lock.jl:273 [inlined] [18] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2271 [19] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [20] invoke_in_world @ ./essentials.jl:1086 [inlined] [21] require(into::Module, mod::Symbol) @ Base ./loading.jl:2260 [22] include @ ./Base.jl:562 [inlined] [23] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:2924 [24] top-level scope @ stdin:6 in expression starting at /home/pkgeval/.julia/packages/OrdinaryDiffEq/vIqLB/src/OrdinaryDiffEq.jl:1 in expression starting at stdin:6 ERROR: LoadError: Failed to precompile OrdinaryDiffEq [1dea7af3-3e70-54e6-95c3-0bf5283fa5ed] to "/home/pkgeval/.julia/compiled/v1.11/OrdinaryDiffEq/jl_PcZtxP". Stacktrace: [1] error(s::String) @ Base ./error.jl:35 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3217 [3] (::Base.var"#1110#1111"{Base.PkgId})() @ Base ./loading.jl:2579 [4] mkpidlock(f::Base.var"#1110#1111"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:95 [5] #mkpidlock#6 @ /opt/julia/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:90 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:116 [7] #invokelatest#2 @ ./essentials.jl:1057 [inlined] [8] invokelatest @ ./essentials.jl:1052 [inlined] [9] maybe_cachefile_lock(f::Base.var"#1110#1111"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3741 [10] maybe_cachefile_lock @ ./loading.jl:3738 [inlined] [11] _require(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2565 [12] __require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2388 [13] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [14] invoke_in_world @ ./essentials.jl:1086 [inlined] [15] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2375 [16] macro expansion @ ./loading.jl:2314 [inlined] [17] macro expansion @ ./lock.jl:273 [inlined] [18] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2271 [19] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [20] invoke_in_world @ ./essentials.jl:1086 [inlined] [21] require(into::Module, mod::Symbol) @ Base ./loading.jl:2260 [22] include @ ./Base.jl:562 [inlined] [23] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:2924 [24] top-level scope @ stdin:6 in expression starting at /home/pkgeval/.julia/packages/StochasticDiffEq/0PuS7/src/StochasticDiffEq.jl:1 in expression starting at stdin:6 ERROR: LoadError: Failed to precompile StochasticDiffEq [789caeaf-c7a9-5a7d-9973-96adeb23e2a0] to "/home/pkgeval/.julia/compiled/v1.11/StochasticDiffEq/jl_CZwz2i". Stacktrace: [1] error(s::String) @ Base ./error.jl:35 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3217 [3] (::Base.var"#1110#1111"{Base.PkgId})() @ Base ./loading.jl:2579 [4] mkpidlock(f::Base.var"#1110#1111"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:95 [5] #mkpidlock#6 @ /opt/julia/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:90 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:116 [7] #invokelatest#2 @ ./essentials.jl:1057 [inlined] [8] invokelatest @ ./essentials.jl:1052 [inlined] [9] maybe_cachefile_lock(f::Base.var"#1110#1111"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3741 [10] maybe_cachefile_lock @ ./loading.jl:3738 [inlined] [11] _require(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2565 [12] __require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2388 [13] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [14] invoke_in_world @ ./essentials.jl:1086 [inlined] [15] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2375 [16] macro expansion @ ./loading.jl:2314 [inlined] [17] macro expansion @ ./lock.jl:273 [inlined] [18] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2271 [19] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [20] invoke_in_world @ ./essentials.jl:1086 [inlined] [21] require(into::Module, mod::Symbol) @ Base ./loading.jl:2260 [22] include @ ./Base.jl:562 [inlined] [23] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:2924 [24] top-level scope @ stdin:6 in expression starting at /home/pkgeval/.julia/packages/DifferentialEquations/jMNGA/src/DifferentialEquations.jl:1 in expression starting at stdin:6 in expression starting at /PkgEval.jl/scripts/precompile.jl:34 Precompilation failed after 2678.93s ################################################################################ # Testing # ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 1 of 1 signal (10): User defined signal 1 _M_lower_bound at /usr/local/x86_64-linux-gnu/include/c++/9.1.0/bits/stl_tree.h:1942 [inlined] find at /usr/local/x86_64-linux-gnu/include/c++/9.1.0/bits/stl_tree.h:2566 [inlined] find at /usr/local/x86_64-linux-gnu/include/c++/9.1.0/bits/stl_map.h:1194 [inlined] FindBaseValue at /source/src/llvm-late-gc-lowering.cpp:468 Number at /source/src/llvm-late-gc-lowering.cpp:851 NoteUse at /source/src/llvm-late-gc-lowering.cpp:1086 [inlined] NoteUse at /source/src/llvm-late-gc-lowering.cpp:329 [inlined] NoteOperandUses at /source/src/llvm-late-gc-lowering.cpp:1105 LocalScan at /source/src/llvm-late-gc-lowering.cpp:1767 runOnFunction at /source/src/llvm-late-gc-lowering.cpp:2824 run at /source/src/llvm-late-gc-lowering.cpp:2840 run at /source/usr/include/llvm/IR/PassManagerInternal.h:89 run at /source/usr/include/llvm/IR/PassManager.h:517 [inlined] run at /source/usr/include/llvm/IR/PassManagerInternal.h:89 _ZN4llvm27ModuleToFunctionPassAdaptor3runERNS_6ModuleERNS_15AnalysisManagerIS1_JEEE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) run at /source/usr/include/llvm/IR/PassManagerInternal.h:89 _ZN4llvm11PassManagerINS_6ModuleENS_15AnalysisManagerIS1_JEEEJEE3runERS1_RS3_ at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) run at /source/src/pipeline.cpp:777 operator() at /source/src/jitlayers.cpp:1298 withModuleDo<(anonymous namespace)::OptimizerT::operator()(llvm::orc::ThreadSafeModule, llvm::orc::MaterializationResponsibility&) [with long unsigned int N = 4]:: > at /source/usr/include/llvm/ExecutionEngine/Orc/ThreadSafeModule.h:136 [inlined] operator() at /source/src/jitlayers.cpp:1259 [inlined] CallImpl<(anonymous namespace)::OptimizerT<4> > at /source/usr/include/llvm/ADT/FunctionExtras.h:221 _ZN4llvm3orc16IRTransformLayer4emitESt10unique_ptrINS0_29MaterializationResponsibilityESt14default_deleteIS3_EENS0_16ThreadSafeModuleE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16IRTransformLayer4emitESt10unique_ptrINS0_29MaterializationResponsibilityESt14default_deleteIS3_EENS0_16ThreadSafeModuleE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16IRTransformLayer4emitESt10unique_ptrINS0_29MaterializationResponsibilityESt14default_deleteIS3_EENS0_16ThreadSafeModuleE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc31BasicIRLayerMaterializationUnit11materializeESt10unique_ptrINS0_29MaterializationResponsibilityESt14default_deleteIS3_EE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc19MaterializationTask3runEv at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm6detail18UniqueFunctionBaseIvJSt10unique_ptrINS_3orc4TaskESt14default_deleteIS4_EEEE8CallImplIPFvS7_EEEvPvRS7_ at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16ExecutionSession22dispatchOutstandingMUsEv at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16ExecutionSession17OL_completeLookupESt10unique_ptrINS0_21InProgressLookupStateESt14default_deleteIS3_EESt10shared_ptrINS0_23AsynchronousSymbolQueryEESt8functionIFvRKNS_8DenseMapIPNS0_8JITDylibENS_8DenseSetINS0_15SymbolStringPtrENS_12DenseMapInfoISF_vEEEENSG_ISD_vEENS_6detail12DenseMapPairISD_SI_EEEEEE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc25InProgressFullLookupState8completeESt10unique_ptrINS0_21InProgressLookupStateESt14default_deleteIS3_EE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16ExecutionSession19OL_applyQueryPhase1ESt10unique_ptrINS0_21InProgressLookupStateESt14default_deleteIS3_EENS_5ErrorE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16ExecutionSession6lookupENS0_10LookupKindERKSt6vectorISt4pairIPNS0_8JITDylibENS0_19JITDylibLookupFlagsEESaIS8_EENS0_15SymbolLookupSetENS0_11SymbolStateENS_15unique_functionIFvNS_8ExpectedINS_8DenseMapINS0_15SymbolStringPtrENS_18JITEvaluatedSymbolENS_12DenseMapInfoISI_vEENS_6detail12DenseMapPairISI_SJ_EEEEEEEEESt8functionIFvRKNSH_IS6_NS_8DenseSetISI_SL_EENSK_IS6_vEENSN_IS6_SV_EEEEEE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16ExecutionSession6lookupERKSt6vectorISt4pairIPNS0_8JITDylibENS0_19JITDylibLookupFlagsEESaIS7_EENS0_15SymbolLookupSetENS0_10LookupKindENS0_11SymbolStateESt8functionIFvRKNS_8DenseMapIS5_NS_8DenseSetINS0_15SymbolStringPtrENS_12DenseMapInfoISI_vEEEENSJ_IS5_vEENS_6detail12DenseMapPairIS5_SL_EEEEEE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) addModule at /source/src/jitlayers.cpp:1875 jl_add_to_ee at /source/src/jitlayers.cpp:2306 jl_add_to_ee at /source/src/jitlayers.cpp:2285 _jl_compile_codeinst at /source/src/jitlayers.cpp:277 jl_generate_fptr_impl at /source/src/jitlayers.cpp:536 jl_compile_method_internal at /source/src/gf.c:2538 [inlined] jl_compile_method_internal at /source/src/gf.c:2425 _jl_invoke at /source/src/gf.c:2943 [inlined] ijl_apply_generic at /source/src/gf.c:3128 jl_apply at /source/src/julia.h:2157 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_stmt_value at /source/src/interpreter.c:174 [inlined] eval_body at /source/src/interpreter.c:670 eval_body at /source/src/interpreter.c:539 eval_body at /source/src/interpreter.c:539 jl_interpret_toplevel_thunk at /source/src/interpreter.c:824 jl_toplevel_eval_flex at /source/src/toplevel.c:943 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 [inlined] include_string at ./loading.jl:2777 _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 _include at ./loading.jl:2837 include at ./Base.jl:562 jfptr_include_47030.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 exec_options at ./client.jl:316 _start at ./client.jl:524 jfptr__start_73686.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 jl_apply at /source/src/julia.h:2157 [inlined] true_main at /source/src/jlapi.c:900 jl_repl_entrypoint at /source/src/jlapi.c:1059 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x791b2ec09249) __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) unknown function (ip: (nil)) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.11/Profile/src/Profile.jl:1240 TestingOverhead ╎ [+additional indent] Count File:Line; Function ========================================================= Thread 1 Task 0x0000791b21dfc010 Total snapshots: 1. Utilization: 100% ╎1 @Base/client.jl:524; _start() ╎ 1 @Base/client.jl:316; exec_options(opts::Base.JLOptions) ╎ 1 @Base/Base.jl:562; include(mod::Module, _path::String) ╎ 1 @Base/loading.jl:2837; _include(mapexpr::Function, mod::Module, _path::S… ╎ 1 @Base/loading.jl:2777; include_string(mapexpr::typeof(identity), mod::M… ╎ 1 @Base/boot.jl:430; eval ╎ ╎ 1 @Pkg/src/API.jl:146; kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(… ╎ ╎ 1 @Pkg/src/API.jl:146; #test#74 ╎ ╎ 1 @Pkg/src/API.jl:147; test ╎ ╎ 1 @Pkg/src/API.jl:147; #test#75 ╎ ╎ 1 @Pkg/src/API.jl:148; kwcall(::@NamedTuple{julia_args::Cmd}, ::typ… AstroChemistry [1] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 __open64 at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__fs_open at /workspace/srcdir/libuv/src/unix/fs.c:442 uv__fs_work at /workspace/srcdir/libuv/src/unix/fs.c:1652 uv_fs_open at /workspace/srcdir/libuv/src/unix/fs.c:1957 open at ./filesystem.jl:185 sendfile at ./file.jl:1127 #cp#14 at ./file.jl:386 cp at ./file.jl:378 [inlined] #rename#38 at ./file.jl:1114 rename at ./file.jl:1110 [inlined] #mv#15 at ./file.jl:428 [inlined] mv at ./file.jl:426 [inlined] #52 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Types.jl:569 #mkpidlock#7 at /source/usr/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:95 mkpidlock at /source/usr/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:92 [inlined] #mkpidlock#6 at /source/usr/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:90 [inlined] mkpidlock at /source/usr/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:90 [inlined] write_env_usage at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Types.jl:534 #download_artifacts#42 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:792 download_artifacts at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:773 unknown function (ip: 0x791b2d754fd6) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 #up#103 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1638 up at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1612 #up#141 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:388 up at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:362 [inlined] #up#48 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:164 [inlined] up at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:164 [inlined] #resolve#143 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:394 [inlined] resolve at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:393 [inlined] #118 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1918 with_temp_env at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1793 #116 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1902 #mktempdir#28 at ./file.jl:819 unknown function (ip: 0x791b2d7833ad) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 mktempdir at ./file.jl:815 mktempdir at ./file.jl:815 [inlined] #sandbox#115 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1849 [inlined] sandbox at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1841 unknown function (ip: 0x791b2d777bfa) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 #test#128 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2067 test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2011 [inlined] #test#146 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:481 test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:460 unknown function (ip: 0x791b2d76baad) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 #test#77 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:159 unknown function (ip: 0x791b2d76b22d) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:148 #test#75 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:147 [inlined] test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:147 [inlined] #test#74 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:146 [inlined] test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:146 unknown function (ip: 0x791b2d7676c6) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 jl_apply at /source/src/julia.h:2157 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_stmt_value at /source/src/interpreter.c:174 [inlined] eval_body at /source/src/interpreter.c:670 eval_body at /source/src/interpreter.c:539 eval_body at /source/src/interpreter.c:539 jl_interpret_toplevel_thunk at /source/src/interpreter.c:824 jl_toplevel_eval_flex at /source/src/toplevel.c:943 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 [inlined] include_string at ./loading.jl:2777 _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 _include at ./loading.jl:2837 include at ./Base.jl:562 jfptr_include_47030.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 exec_options at ./client.jl:316 _start at ./client.jl:524 jfptr__start_73686.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 jl_apply at /source/src/julia.h:2157 [inlined] true_main at /source/src/jlapi.c:900 jl_repl_entrypoint at /source/src/jlapi.c:1059 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x791b2ec09249) __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) unknown function (ip: (nil)) Allocations: 31324703 (Pool: 31323809; Big: 894); GC: 32 error in running finalizer: ErrorException("task switch not allowed from inside gc finalizer") ijl_error at /source/src/rtutils.c:43 ijl_switch at /source/src/task.c:637 try_yieldto at ./task.jl:948 wait at ./task.jl:1022 #wait#733 at ./condition.jl:130 wait at ./condition.jl:125 [inlined] close at ./asyncevent.jl:183 close at /source/usr/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:328 jfptr_close_49991.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 run_finalizer at /source/src/gc.c:303 jl_gc_run_finalizers_in_list at /source/src/gc.c:393 run_finalizers at /source/src/gc.c:439 run_finalizers at /source/src/gc.c:420 [inlined] ijl_gc_collect at /source/src/gc.c:3915 gc at ./gcutils.jl:133 [inlined] temp_cleanup_purge_all at ./file.jl:596 jfptr_temp_cleanup_purge_all_51650.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 _atexit at ./initdefs.jl:451 jfptr__atexit_69645.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 jl_apply at /source/src/julia.h:2157 [inlined] ijl_atexit_hook at /source/src/init.c:271 jl_exit_thread0_cb at /source/src/signals-unix.c:517 PkgEval terminated after 2774.64s: test duration exceeded the time limit