Package evaluation of QuartoNotebookRunner on Julia 1.12.0-rc2.1 (1fad90817e*) started at 2025-09-11T04:42:55.518 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 9.35s ################################################################################ # Installation # Installing QuartoNotebookRunner... Resolving package versions... Updating `~/.julia/environments/v1.12/Project.toml` [4c0109c6] + QuartoNotebookRunner v0.17.3 Updating `~/.julia/environments/v1.12/Manifest.toml` [fbb218c0] + BSON v0.3.9 [a80b9123] + CommonMark v0.9.1 [34da2185] + Compat v4.18.0 [b5f81e59] + IOCapture v0.2.5 [c8e1da08] + IterTools v1.10.0 [692b3bcd] + JLLWrappers v1.7.1 [0f8b85d8] + JSON3 v1.14.3 [69de0a69] + Parsers v2.8.3 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.0 [33c8b6b6] + ProgressLogging v0.1.5 [4c0109c6] + QuartoNotebookRunner v0.17.3 [05181044] + RelocatableFolders v1.0.1 [6c6a2e73] + Scratch v1.3.0 [69024149] + StringEncodings v0.3.7 [856f2bd8] + StructTypes v1.11.0 [ddb6d928] + YAML v0.4.14 [94ce4f54] + Libiconv_jll v1.18.0+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [f43a241f] + Downloads v1.6.0 [7b1f6079] + FileWatching v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.12.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [6462fe0b] + Sockets v1.11.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [deac9b47] + LibCURL_jll v8.11.1+1 [e37daf67] + LibGit2_jll v1.9.0+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.5.20 [458c3c95] + OpenSSL_jll v3.5.1+0 [83775a58] + Zlib_jll v1.3.1+2 [8e850ede] + nghttp2_jll v1.64.0+1 [3f19e933] + p7zip_jll v17.5.0+2 Installation completed after 4.49s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 23.09s ################################################################################ # Testing # Testing QuartoNotebookRunner Status `/tmp/jl_BP1ySh/Project.toml` [0f8b85d8] JSON3 v1.14.3 [7d188eb4] JSONSchema v1.4.1 [4c0109c6] QuartoNotebookRunner v0.17.3 [c1e1d063] NodeJS_18_jll v18.16.1+0 ⌅ [b7163347] quarto_jll v1.4.549+0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [56ddb016] Logging v1.11.0 [6462fe0b] Sockets v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_BP1ySh/Manifest.toml` [fbb218c0] BSON v0.3.9 [a80b9123] CommonMark v0.9.1 [34da2185] Compat v4.18.0 [b5f81e59] IOCapture v0.2.5 [c8e1da08] IterTools v1.10.0 [692b3bcd] JLLWrappers v1.7.1 [682c06a0] JSON v0.21.4 [0f8b85d8] JSON3 v1.14.3 [7d188eb4] JSONSchema v1.4.1 [69de0a69] Parsers v2.8.3 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.0 [33c8b6b6] ProgressLogging v0.1.5 [4c0109c6] QuartoNotebookRunner v0.17.3 [05181044] RelocatableFolders v1.0.1 [6c6a2e73] Scratch v1.3.0 [69024149] StringEncodings v0.3.7 [856f2bd8] StructTypes v1.11.0 [5c2747f8] URIs v1.6.1 [ddb6d928] YAML v0.4.14 [94ce4f54] Libiconv_jll v1.18.0+0 [c1e1d063] NodeJS_18_jll v18.16.1+0 ⌅ [b7163347] quarto_jll v1.4.549+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [f43a241f] Downloads v1.6.0 [7b1f6079] FileWatching v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.12.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [f489334b] StyledStrings v1.11.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [deac9b47] LibCURL_jll v8.11.1+1 [e37daf67] LibGit2_jll v1.9.0+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.5.20 [458c3c95] OpenSSL_jll v3.5.1+0 [83775a58] Zlib_jll v1.3.1+2 [8e850ede] nghttp2_jll v1.64.0+1 [3f19e933] p7zip_jll v17.5.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Precompiling packages... 5581.8 ms ✓ NodeJS_18_jll 1 dependency successfully precompiled in 6 seconds. 6 already precompiled. Precompiling packages... 1505.7 ms ✓ quarto_jll 1 dependency successfully precompiled in 2 seconds. 6 already precompiled. Updating `~/.julia/packages/QuartoNotebookRunner/fVEXT/test/examples/integrations/CairoMakie/Project.toml` [13f3f980] + CairoMakie v0.15.6 Updating `~/.julia/packages/QuartoNotebookRunner/fVEXT/test/examples/integrations/CairoMakie/Manifest.toml` [621f4979] + AbstractFFTs v1.5.0 [1520ce14] + AbstractTrees v0.4.5 [79e6a3ab] + Adapt v4.3.0 [35492f91] + AdaptivePredicates v1.2.0 [66dad0bd] + AliasTables v1.1.3 [27a7e980] + Animations v0.4.2 [67c07d97] + Automa v1.1.0 [13072b0f] + AxisAlgorithms v1.1.0 [39de3d68] + AxisArrays v0.4.8 [18cc8868] + BaseDirs v1.3.2 [fa961155] + CEnum v0.5.0 [96374032] + CRlibm v1.0.2 [159f3aea] + Cairo v1.1.1 [13f3f980] + CairoMakie v0.15.6 [d360d2e6] + ChainRulesCore v1.26.0 [a2cac450] + ColorBrewer v0.4.1 [35d6a980] + ColorSchemes v3.30.0 [3da002f7] + ColorTypes v0.12.1 [c3611d14] + ColorVectorSpace v0.11.0 [5ae59095] + Colors v0.13.1 [34da2185] + Compat v4.18.0 [95dc2771] + ComputePipeline v0.1.4 [187b0558] + ConstructionBase v1.6.0 [d38c429a] + Contour 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[a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.12.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.11.1+1 [e37daf67] + LibGit2_jll v1.9.0+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.5.20 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.1+0 [efcefdf7] + PCRE2_jll v10.44.0+1 [bea87d4a] + SuiteSparse_jll v7.8.3+2 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.13.1+1 [8e850ede] + nghttp2_jll v1.64.0+1 [3f19e933] + p7zip_jll v17.5.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Info We haven't cleaned this depot up for a bit, running Pkg.gc()... Active manifest files: 4 found Active artifact files: 60 found Active scratchspaces: 0 found Deleted no artifacts, repos, packages or scratchspaces Installed PlotlyJS ─ v0.18.17 Installed WebIO ──── v0.8.21 Updating `~/.julia/packages/QuartoNotebookRunner/fVEXT/test/examples/integrations/PlotlyJS/Project.toml` [f0f68f2c] + PlotlyJS v0.18.17 Updating `~/.julia/packages/QuartoNotebookRunner/fVEXT/test/examples/integrations/PlotlyJS/Manifest.toml` [bf4720bc] + AssetRegistry v0.1.0 [d1d4a3ce] + BitFlags v0.1.9 [ad839575] + Blink v0.12.9 [944b1d66] + CodecZlib v0.7.8 [35d6a980] + ColorSchemes v3.30.0 [3da002f7] + ColorTypes v0.12.1 [c3611d14] + ColorVectorSpace v0.11.0 [5ae59095] + Colors v0.13.1 [f0e56b4a] + ConcurrentUtilities v2.5.0 [9a962f9c] + DataAPI v1.16.0 [e2d170a0] + DataValueInterfaces v1.0.0 [8bb1440f] + DelimitedFiles v1.9.1 [ffbed154] + DocStringExtensions v0.9.5 [460bff9d] + ExceptionUnwrapping v0.1.11 [53c48c17] + FixedPointNumbers v0.8.5 [de31a74c] + FunctionalCollections v0.5.0 [cd3eb016] + HTTP v1.10.17 [9fb69e20] + Hiccup v0.2.2 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 [97c1335a] + JSExpr v0.5.4 [682c06a0] + JSON v0.21.4 [b964fa9f] + LaTeXStrings v1.4.0 [50d2b5c4] + Lazy v0.15.1 [e6f89c97] + LoggingExtras v1.1.0 [1914dd2f] + MacroTools v0.5.16 [739be429] + MbedTLS v1.1.9 [ffc61752] + Mustache v1.0.21 [a975b10e] + Mux v1.0.2 [510215fc] + Observables v0.5.5 [4d8831e6] + OpenSSL v1.5.0 [bac558e1] + OrderedCollections v1.8.1 [d96e819e] + Parameters v0.12.3 [69de0a69] + Parsers v2.8.3 [fa939f87] + Pidfile v1.3.0 [a03496cd] + PlotlyBase v0.8.21 [f0f68f2c] + PlotlyJS v0.18.17 [f2990250] + PlotlyKaleido v2.3.0 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.0 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [777ac1f9] + SimpleBufferStream v1.2.0 [10745b16] + Statistics v1.11.1 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [62fd8b95] + TensorCore v0.1.1 [3bb67fe8] + TranscodingStreams v0.11.3 [5c2747f8] + URIs v1.6.1 [3a884ed6] + UnPack v1.0.2 [0f1e0344] + WebIO v0.8.21 [104b5d7c] + WebSockets v1.6.0 [cc8bc4a8] + Widgets v0.6.7 [f7e6163d] + Kaleido_jll v0.2.1+0 [c8ffd9c3] + MbedTLS_jll v2.28.6+2 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.6.0 [7b1f6079] + FileWatching v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.12.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.11.1+1 [e37daf67] + LibGit2_jll v1.9.0+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.5.20 [4536629a] + OpenBLAS_jll v0.3.29+0 [458c3c95] + OpenSSL_jll v3.5.1+0 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.13.1+1 [8e850ede] + nghttp2_jll v1.64.0+1 [3f19e933] + p7zip_jll v17.5.0+2 Building WebIO ───→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/0eef0765186f7452e52236fa42ca8c9b3c11c6e3/build.log` Building PlotlyJS → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/287e092914da6c91f002aafcf82a2ec065bf94a3/build.log` Updating `~/.julia/packages/QuartoNotebookRunner/fVEXT/test/examples/integrations/Plots/Project.toml` [91a5bcdd] + Plots v1.40.19 Updating `~/.julia/packages/QuartoNotebookRunner/fVEXT/test/examples/integrations/Plots/Manifest.toml` [66dad0bd] + AliasTables v1.1.3 [d1d4a3ce] + BitFlags v0.1.9 [944b1d66] + CodecZlib v0.7.8 [35d6a980] + ColorSchemes v3.30.0 [3da002f7] + ColorTypes v0.12.1 [c3611d14] + ColorVectorSpace v0.11.0 [5ae59095] + Colors v0.13.1 [f0e56b4a] + ConcurrentUtilities v2.5.0 [d38c429a] + Contour v0.6.3 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.19.1 [8bb1440f] + DelimitedFiles v1.9.1 [ffbed154] + DocStringExtensions v0.9.5 [460bff9d] + ExceptionUnwrapping v0.1.11 [c87230d0] + FFMPEG v0.4.4 [53c48c17] + FixedPointNumbers v0.8.5 [1fa38f19] + Format v1.3.7 [28b8d3ca] + GR v0.73.17 [42e2da0e] + Grisu v1.0.2 [cd3eb016] + HTTP v1.10.17 [92d709cd] + IrrationalConstants v0.2.4 [1019f520] + JLFzf v0.1.11 [692b3bcd] + JLLWrappers v1.7.1 [682c06a0] + JSON v0.21.4 [b964fa9f] + LaTeXStrings v1.4.0 [23fbe1c1] + Latexify v0.16.10 [2ab3a3ac] + LogExpFunctions v0.3.29 [e6f89c97] + LoggingExtras v1.1.0 [1914dd2f] + MacroTools v0.5.16 [739be429] + MbedTLS v1.1.9 [442fdcdd] + Measures v0.3.2 [e1d29d7a] + Missings v1.2.0 [77ba4419] + NaNMath v1.1.3 [4d8831e6] + OpenSSL v1.5.0 [bac558e1] + OrderedCollections v1.8.1 [69de0a69] + Parsers v2.8.3 [ccf2f8ad] + PlotThemes v3.3.0 [995b91a9] + PlotUtils v1.4.3 [91a5bcdd] + Plots v1.40.19 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.0 [43287f4e] + PtrArrays v1.3.0 [3cdcf5f2] + RecipesBase v1.3.4 [01d81517] + RecipesPipeline v0.6.12 [189a3867] + Reexport v1.2.2 [05181044] + RelocatableFolders v1.0.1 [ae029012] + Requires v1.3.1 [6c6a2e73] + Scratch v1.3.0 [992d4aef] + Showoff v1.0.3 [777ac1f9] + SimpleBufferStream v1.2.0 [a2af1166] + SortingAlgorithms v1.2.2 [860ef19b] + StableRNGs v1.0.3 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 [2913bbd2] + StatsBase v0.34.6 [62fd8b95] + TensorCore v0.1.1 [3bb67fe8] + TranscodingStreams v0.11.3 [5c2747f8] + URIs v1.6.1 [1cfade01] + UnicodeFun v0.4.1 [1986cc42] + Unitful v1.24.0 [45397f5d] + UnitfulLatexify v1.7.0 [41fe7b60] + Unzip v0.2.0 [6e34b625] + Bzip2_jll v1.0.9+0 [83423d85] + Cairo_jll v1.18.5+0 [ee1fde0b] + Dbus_jll v1.16.2+0 [2702e6a9] + EpollShim_jll v0.0.20230411+1 [2e619515] + Expat_jll v2.7.1+0 [b22a6f82] + FFMPEG_jll v7.1.1+0 [a3f928ae] + Fontconfig_jll v2.17.1+0 [d7e528f0] + FreeType2_jll v2.13.4+0 [559328eb] + FriBidi_jll v1.0.17+0 [0656b61e] + GLFW_jll v3.4.0+2 [d2c73de3] + GR_jll v0.73.17+0 [b0724c58] + GettextRuntime_jll v0.22.4+0 [61579ee1] + Ghostscript_jll v9.55.1+0 [7746bdde] + Glib_jll v2.86.0+0 [3b182d85] + Graphite2_jll v1.3.15+0 [2e76f6c2] + HarfBuzz_jll v8.5.1+0 [aacddb02] + JpegTurbo_jll v3.1.3+0 [c1c5ebd0] + LAME_jll v3.100.3+0 [88015f11] + LERC_jll v4.0.1+0 [1d63c593] + LLVMOpenMP_jll v18.1.8+0 [dd4b983a] + LZO_jll v2.10.3+0 [e9f186c6] + Libffi_jll v3.4.7+0 [7e76a0d4] + Libglvnd_jll v1.7.1+1 [94ce4f54] + Libiconv_jll v1.18.0+0 [4b2f31a3] + Libmount_jll v2.41.1+0 [89763e89] + Libtiff_jll v4.7.1+0 [38a345b3] + Libuuid_jll v2.41.1+0 [c8ffd9c3] + MbedTLS_jll v2.28.6+2 [e7412a2a] + Ogg_jll v1.3.6+0 [91d4177d] + Opus_jll v1.5.2+0 [36c8627f] + Pango_jll v1.56.3+0 ⌅ [30392449] + Pixman_jll v0.44.2+0 [c0090381] + Qt6Base_jll v6.8.2+1 [629bc702] + Qt6Declarative_jll v6.8.2+1 [ce943373] + Qt6ShaderTools_jll v6.8.2+1 [e99dba38] + Qt6Wayland_jll v6.8.2+1 [a44049a8] + Vulkan_Loader_jll v1.3.243+0 [a2964d1f] + Wayland_jll v1.24.0+0 [ffd25f8a] + XZ_jll v5.8.1+0 [f67eecfb] + Xorg_libICE_jll v1.1.2+0 [c834827a] + Xorg_libSM_jll v1.2.6+0 [4f6342f7] + Xorg_libX11_jll v1.8.12+0 [0c0b7dd1] + Xorg_libXau_jll v1.0.13+0 [935fb764] + Xorg_libXcursor_jll v1.2.4+0 [a3789734] + Xorg_libXdmcp_jll v1.1.6+0 [1082639a] + Xorg_libXext_jll v1.3.7+0 [d091e8ba] + Xorg_libXfixes_jll v6.0.1+0 [a51aa0fd] + Xorg_libXi_jll v1.8.3+0 [d1454406] + Xorg_libXinerama_jll v1.1.6+0 [ec84b674] + Xorg_libXrandr_jll v1.5.5+0 [ea2f1a96] + Xorg_libXrender_jll v0.9.12+0 [c7cfdc94] + Xorg_libxcb_jll v1.17.1+0 [cc61e674] + Xorg_libxkbfile_jll v1.1.3+0 [e920d4aa] + Xorg_xcb_util_cursor_jll v0.1.5+0 [12413925] + Xorg_xcb_util_image_jll v0.4.1+0 [2def613f] + Xorg_xcb_util_jll v0.4.1+0 [975044d2] + Xorg_xcb_util_keysyms_jll v0.4.1+0 [0d47668e] + Xorg_xcb_util_renderutil_jll v0.3.10+0 [c22f9ab0] + Xorg_xcb_util_wm_jll v0.4.2+0 [35661453] + Xorg_xkbcomp_jll v1.4.7+0 [33bec58e] + Xorg_xkeyboard_config_jll v2.44.0+0 [c5fb5394] + Xorg_xtrans_jll v1.6.0+0 [3161d3a3] + Zstd_jll v1.5.7+1 [35ca27e7] + eudev_jll v3.2.14+0 [214eeab7] + fzf_jll v0.61.1+0 [a4ae2306] + libaom_jll v3.12.1+0 [0ac62f75] + libass_jll v0.17.4+0 [1183f4f0] + libdecor_jll v0.2.2+0 [2db6ffa8] + libevdev_jll v1.13.4+0 [f638f0a6] + libfdk_aac_jll v2.0.4+0 [36db933b] + libinput_jll v1.28.1+0 [b53b4c65] + libpng_jll v1.6.50+0 [f27f6e37] + libvorbis_jll v1.3.8+0 [009596ad] + mtdev_jll v1.1.7+0 [1270edf5] + x264_jll v10164.0.1+0 [dfaa095f] + x265_jll v4.1.0+0 [d8fb68d0] + xkbcommon_jll v1.9.2+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [f43a241f] + Downloads v1.6.0 [7b1f6079] + FileWatching v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.12.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.11.1+1 [e37daf67] + LibGit2_jll v1.9.0+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.5.20 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.1+0 [efcefdf7] + PCRE2_jll v10.44.0+1 [bea87d4a] + SuiteSparse_jll v7.8.3+2 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.13.1+1 [8e850ede] + nghttp2_jll v1.64.0+1 [3f19e933] + p7zip_jll v17.5.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Updating `~/.julia/packages/QuartoNotebookRunner/fVEXT/test/examples/integrations/PythonCall/Project.toml` [6099a3de] + PythonCall v0.9.27 Updating `~/.julia/packages/QuartoNotebookRunner/fVEXT/test/examples/integrations/PythonCall/Manifest.toml` [992eb4ea] + CondaPkg v0.2.31 [9a962f9c] + DataAPI v1.16.0 [e2d170a0] + DataValueInterfaces v1.0.0 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 [0f8b85d8] + JSON3 v1.14.3 [1914dd2f] + MacroTools v0.5.16 [0b3b1443] + MicroMamba v0.1.14 [bac558e1] + OrderedCollections v1.8.1 [69de0a69] + Parsers v2.8.3 [fa939f87] + Pidfile v1.3.0 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.0 [6099a3de] + PythonCall v0.9.27 [ae029012] + Requires v1.3.1 [6c6a2e73] + Scratch v1.3.0 [856f2bd8] + StructTypes v1.11.0 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [e17b2a0c] + UnsafePointers v1.0.0 ⌅ [f8abcde7] + micromamba_jll v1.5.12+0 [4d7b5844] + pixi_jll v0.41.3+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [f43a241f] + Downloads v1.6.0 [7b1f6079] + FileWatching v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.12.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [deac9b47] + LibCURL_jll v8.11.1+1 [e37daf67] + LibGit2_jll v1.9.0+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.5.20 [458c3c95] + OpenSSL_jll v3.5.1+0 [83775a58] + Zlib_jll v1.3.1+2 [8e850ede] + nghttp2_jll v1.64.0+1 [3f19e933] + p7zip_jll v17.5.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installed Conda ─ v1.10.2 Installed RCall ─ v0.14.9 Updating `~/.julia/packages/QuartoNotebookRunner/fVEXT/test/examples/integrations/RCall/Project.toml` [6f49c342] + RCall v0.14.9 Updating `~/.julia/packages/QuartoNotebookRunner/fVEXT/test/examples/integrations/RCall/Manifest.toml` [66dad0bd] + AliasTables v1.1.3 [324d7699] + CategoricalArrays v1.0.1 [34da2185] + Compat v4.18.0 [8f4d0f93] + Conda v1.10.2 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.7.1 ⌅ [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [ffbed154] + DocStringExtensions v0.9.5 [34004b35] + HypergeometricFunctions v0.3.28 [842dd82b] + InlineStrings v1.4.5 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.4 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 [682c06a0] + JSON v0.21.4 [b964fa9f] + LaTeXStrings v1.4.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [e1d29d7a] + Missings v1.2.0 [bac558e1] + OrderedCollections v1.8.1 [69de0a69] + Parsers v2.8.3 [2dfb63ee] + PooledArrays v1.4.3 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.0 ⌅ [08abe8d2] + PrettyTables v2.4.0 [43287f4e] + PtrArrays v1.3.0 [6f49c342] + RCall v0.14.9 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.8.0 [91c51154] + SentinelArrays v1.4.8 [1277b4bf] + ShiftedArrays v2.0.0 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.5.1 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 [2913bbd2] + StatsBase v0.34.6 [4c63d2b9] + StatsFuns v1.5.0 [3eaba693] + StatsModels v0.7.6 [892a3eda] + StringManipulation v0.4.1 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [81def892] + VersionParsing v1.3.0 [1b915085] + WinReg v1.0.0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [f43a241f] + Downloads v1.6.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [b27032c2] + LibCURL v0.6.4 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.11.1+1 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.5.20 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.1+0 [bea87d4a] + SuiteSparse_jll v7.8.3+2 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.13.1+1 [8e850ede] + nghttp2_jll v1.64.0+1 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Building Conda → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/b19db3927f0db4151cb86d073689f2428e524576/build.log` Building RCall → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/7521292e0ca900751cf0f35f2a2faf1cb321e960/build.log` Installed PyCall ─ v1.96.4 Updating `~/.julia/packages/QuartoNotebookRunner/fVEXT/test/examples/integrations/SymPy/Project.toml` [438e738f] + PyCall v1.96.4 [24249f21] + SymPy v2.3.3 Updating `~/.julia/packages/QuartoNotebookRunner/fVEXT/test/examples/integrations/SymPy/Manifest.toml` [3709ef60] + CommonEq v0.2.1 [38540f10] + CommonSolve v0.2.4 [8f4d0f93] + Conda v1.10.2 [ffbed154] + DocStringExtensions v0.9.5 [1fa38f19] + Format v1.3.7 [92d709cd] + IrrationalConstants v0.2.4 [692b3bcd] + JLLWrappers v1.7.1 [682c06a0] + JSON v0.21.4 [b964fa9f] + LaTeXStrings v1.4.0 [23fbe1c1] + Latexify v0.16.10 [2ab3a3ac] + LogExpFunctions v0.3.29 [1914dd2f] + MacroTools v0.5.16 [bac558e1] + OrderedCollections v1.8.1 [69de0a69] + Parsers v2.8.3 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.0 [438e738f] + PyCall v1.96.4 [3cdcf5f2] + RecipesBase v1.3.4 [ae029012] + Requires v1.3.1 [276daf66] + SpecialFunctions v2.5.1 [24249f21] + SymPy v2.3.3 [458b697b] + SymPyCore v0.3.2 [8ea1fca8] + TermInterface v2.0.0 [81def892] + VersionParsing v1.3.0 [61579ee1] + Ghostscript_jll v9.55.1+0 [aacddb02] + JpegTurbo_jll v3.1.3+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [f43a241f] + Downloads v1.6.0 [7b1f6079] + FileWatching v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [b27032c2] + LibCURL v0.6.4 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.11.1+1 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.5.20 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.1+0 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.13.1+1 [8e850ede] + nghttp2_jll v1.64.0+1 Building PyCall → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/9816a3826b0ebf49ab4926e2b18842ad8b5c8f04/build.log` Updating `~/.julia/packages/QuartoNotebookRunner/fVEXT/test/examples/integrations/ojs_define/Project.toml` [a93c6f00] + DataFrames v1.7.1 [682c06a0] + JSON v0.21.4 [0f8b85d8] + JSON3 v1.14.3 [bd369af6] + Tables v1.12.1 Updating `~/.julia/packages/QuartoNotebookRunner/fVEXT/test/examples/integrations/ojs_define/Manifest.toml` [34da2185] + Compat v4.18.0 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.7.1 [864edb3b] + DataStructures v0.19.1 [e2d170a0] + DataValueInterfaces v1.0.0 [842dd82b] + InlineStrings v1.4.5 [41ab1584] + InvertedIndices v1.3.1 [82899510] + IteratorInterfaceExtensions v1.0.0 [682c06a0] + JSON v0.21.4 [0f8b85d8] + JSON3 v1.14.3 [b964fa9f] + LaTeXStrings v1.4.0 [e1d29d7a] + Missings v1.2.0 [bac558e1] + OrderedCollections v1.8.1 [69de0a69] + Parsers v2.8.3 [2dfb63ee] + PooledArrays v1.4.3 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.0 ⌅ [08abe8d2] + PrettyTables v2.4.0 [189a3867] + Reexport v1.2.2 [91c51154] + SentinelArrays v1.4.8 [a2af1166] + SortingAlgorithms v1.2.2 [10745b16] + Statistics v1.11.1 [892a3eda] + StringManipulation v0.4.1 [856f2bd8] + StructTypes v1.11.0 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [9fa8497b] + Future v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [4536629a] + OpenBLAS_jll v0.3.29+0 [8e850b90] + libblastrampoline_jll v5.13.1+1 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Updating `~/.julia/packages/QuartoNotebookRunner/fVEXT/test/examples/mimetypes/Project.toml` [13f3f980] + CairoMakie v0.15.6 [a93c6f00] + DataFrames v1.7.1 [23fbe1c1] + Latexify v0.16.10 ⌅ [08abe8d2] + PrettyTables v2.4.0 Updating `~/.julia/packages/QuartoNotebookRunner/fVEXT/test/examples/mimetypes/Manifest.toml` [621f4979] + AbstractFFTs v1.5.0 [1520ce14] + AbstractTrees v0.4.5 [79e6a3ab] + Adapt v4.3.0 [35492f91] + AdaptivePredicates v1.2.0 [66dad0bd] + AliasTables v1.1.3 [27a7e980] + Animations v0.4.2 [67c07d97] + Automa v1.1.0 [13072b0f] + AxisAlgorithms v1.1.0 [39de3d68] + AxisArrays v0.4.8 [18cc8868] + BaseDirs v1.3.2 [fa961155] + CEnum v0.5.0 [96374032] + CRlibm v1.0.2 [159f3aea] + Cairo v1.1.1 [13f3f980] + CairoMakie v0.15.6 [d360d2e6] + ChainRulesCore v1.26.0 [a2cac450] + ColorBrewer v0.4.1 [35d6a980] + ColorSchemes v3.30.0 [3da002f7] + ColorTypes v0.12.1 [c3611d14] + ColorVectorSpace v0.11.0 [5ae59095] + Colors v0.13.1 [34da2185] + Compat v4.18.0 [95dc2771] + ComputePipeline v0.1.4 [187b0558] + ConstructionBase v1.6.0 [d38c429a] + Contour v0.6.3 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.7.1 [864edb3b] + DataStructures v0.19.1 [e2d170a0] + DataValueInterfaces v1.0.0 [927a84f5] + DelaunayTriangulation v1.6.4 [31c24e10] + Distributions v0.25.120 [ffbed154] + DocStringExtensions v0.9.5 [4e289a0a] + EnumX v1.0.5 [429591f6] + ExactPredicates v2.2.8 [411431e0] + Extents v0.1.6 [7a1cc6ca] + FFTW v1.9.0 [5789e2e9] + FileIO v1.17.0 ⌅ [8fc22ac5] + FilePaths v0.8.3 [48062228] + FilePathsBase v0.9.24 [1a297f60] + FillArrays v1.14.0 [53c48c17] + FixedPointNumbers v0.8.5 [1fa38f19] + Format v1.3.7 [b38be410] + FreeType v4.1.1 [663a7486] + FreeTypeAbstraction v0.10.8 [5c1252a2] + GeometryBasics v0.5.10 [a2bd30eb] + Graphics v1.1.3 [3955a311] + GridLayoutBase v0.11.2 [42e2da0e] + Grisu v1.0.2 [34004b35] + HypergeometricFunctions v0.3.28 [2803e5a7] + ImageAxes v0.6.12 [c817782e] + ImageBase v0.1.7 [a09fc81d] + ImageCore v0.10.5 [82e4d734] + ImageIO v0.6.9 [bc367c6b] + ImageMetadata v0.9.10 [9b13fd28] + IndirectArrays v1.0.0 [d25df0c9] + Inflate v0.1.5 [842dd82b] + InlineStrings v1.4.5 [a98d9a8b] + Interpolations v0.16.2 ⌅ [d1acc4aa] + IntervalArithmetic v0.22.36 [8197267c] + IntervalSets v0.7.11 [3587e190] + InverseFunctions v0.1.17 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.4 [f1662d9f] + Isoband v0.1.1 [c8e1da08] + IterTools v1.10.0 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 [682c06a0] + JSON v0.21.4 [b835a17e] + JpegTurbo v0.1.6 [5ab0869b] + KernelDensity v0.6.10 [b964fa9f] + LaTeXStrings v1.4.0 [23fbe1c1] + Latexify v0.16.10 [8cdb02fc] + LazyModules v0.3.1 [2ab3a3ac] + LogExpFunctions v0.3.29 [1914dd2f] + MacroTools v0.5.16 [ee78f7c6] + Makie v0.24.6 [dbb5928d] + MappedArrays v0.4.2 [0a4f8689] + MathTeXEngine v0.6.6 [e1d29d7a] + Missings v1.2.0 [e94cdb99] + MosaicViews v0.3.4 [77ba4419] + 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ShaderAbstractions v0.5.0 [992d4aef] + Showoff v1.0.3 [73760f76] + SignedDistanceFields v0.4.0 [699a6c99] + SimpleTraits v0.9.5 [45858cf5] + Sixel v0.1.5 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.5.1 [860ef19b] + StableRNGs v1.0.3 [cae243ae] + StackViews v0.1.2 [90137ffa] + StaticArrays v1.9.15 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 [2913bbd2] + StatsBase v0.34.6 [4c63d2b9] + StatsFuns v1.5.0 [892a3eda] + StringManipulation v0.4.1 [09ab397b] + StructArrays v0.7.1 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [62fd8b95] + TensorCore v0.1.1 [731e570b] + TiffImages v0.11.6 [3bb67fe8] + TranscodingStreams v0.11.3 [981d1d27] + TriplotBase v0.1.0 [1cfade01] + UnicodeFun v0.4.1 [1986cc42] + Unitful v1.24.0 [e3aaa7dc] + WebP v0.1.3 [efce3f68] + WoodburyMatrices v1.0.0 [6e34b625] + Bzip2_jll v1.0.9+0 [4e9b3aee] + CRlibm_jll v1.0.1+0 [83423d85] + Cairo_jll v1.18.5+0 [5ae413db] + EarCut_jll 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To see why use `status --outdated -m` ┌ Info: removed files and directories └ removed = Any[] ERROR: unknown option `--unknown-flag` ERROR: SystemError: opening file "/home/pkgeval/.julia/packages/QuartoNotebookRunner/fVEXT/test/examples/+unknown": No such file or directory Stacktrace: [1] include(mod::Module, _path::String)  @ Base ./Base.jl:305 [2] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:321 [3] _start()  @ Base ./client.jl:554 bad exeflags: Test Failed at /home/pkgeval/.julia/packages/QuartoNotebookRunner/fVEXT/test/testsets/bad_exeflags.jl:15 Expression: QuartoNotebookRunner.run!(s, path) Expected: "Invalid Juliaup channel `unknown`" Message: "Failed to run Julia worker process with the provided command:\n\n`/opt/julia/bin/julia --startup-file=no --color=yes +unknown`\n\nThe error produced by trying to run this command is shown below:\n\n\e[91m\e[1mERROR: \e[22m\e[39mSystemError: opening file \"/home/pkgeval/.julia/packages/QuartoNotebookRunner/fVEXT/test/examples/+unknown\": No such file or directory\nStacktrace:\n [1] \e[0m\e[1minclude\e[22m\e[0m\e[1m(\e[22m\e[90mmod\e[39m::\e[0mModule, \e[90m_path\e[39m::\e[0mString\e[0m\e[1m)\e[22m\n\e[90m @\e[39m \e[90mBase\e[39m \e[90m./\e[39m\e[90m\e[4mBase.jl:305\e[24m\e[39m\n [2] \e[0m\e[1mexec_options\e[22m\e[0m\e[1m(\e[22m\e[90mopts\e[39m::\e[0mBase.JLOptions\e[0m\e[1m)\e[22m\n\e[90m @\e[39m \e[90mBase\e[39m \e[90m./\e[39m\e[90m\e[4mclient.jl:321\e[24m\e[39m\n [3] \e[0m\e[1m_start\e[22m\e[0m\e[1m(\e[22m\e[0m\e[1m)\e[22m\n\e[90m @\e[39m \e[90mBase\e[39m \e[90m./\e[39m\e[90m\e[4mclient.jl:554\e[24m\e[39m\n" Stacktrace: [1] top-level scope @ ~/.julia/packages/QuartoNotebookRunner/fVEXT/test/testsets/bad_exeflags.jl:4 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.12/Test/src/Test.jl:1776 [inlined] [3] macro expansion @ ~/.julia/packages/QuartoNotebookRunner/fVEXT/test/testsets/bad_exeflags.jl:15 [inlined] [ Info: Testing examples/cache-cell-output.qmd [ Info: Testing examples/cache-cell-output.qmd [ Info: Testing examples/cache-cell-output.qmd ┌ Info: Testing examples/cache-cell-output.qmd (extra options) │ options = │ Dict{String, Any} with 1 entry: └ "format" => Dict{String, Any}("execute"=>Dict{String, Any}("cache"=>fals… ┌ Info: Testing examples/cache-cell-output.qmd (extra options) │ options = │ Dict{String, Any} with 1 entry: └ "format" => Dict{String, Any}("execute"=>Dict{String, Any}("cache"=>fals… ┌ Info: Testing examples/cache-cell-output.qmd (extra options) │ options = │ Dict{String, Any} with 1 entry: └ "format" => Dict{String, Any}("execute"=>Dict{String, Any}("cache"=>fals… [ Info: Testing examples/cell_dependencies.qmd [ Info: Testing examples/cell_expansion.qmd [ Info: Testing examples/cell_expansion_errors.qmd [ Info: Testing examples/cell_options.qmd [ Info: Testing examples/cell_types.qmd [ Info: Testing examples/display-mime.qmd [ Info: Testing examples/display.qmd [ Info: Testing examples/empty_notebook.qmd [ Info: Testing examples/env_and_exeflags.qmd [ Info: Testing examples/env_and_exeflags.qmd [ Info: Testing examples/errors.qmd WARNING: Detected access to binding `Notebook.f` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Detected access to binding `Notebook.f` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. [ Info: Testing examples/evalfalse.qmd ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== [1500] signal 11 (1): Segmentation fault in expression starting at none:0 Allocations: 0 (Pool: 0; Big: 0); GC: 0 exeflags merging: Error During Test at /home/pkgeval/.julia/packages/QuartoNotebookRunner/fVEXT/test/testsets/exeflags_merging.jl:3 Got exception outside of a @test Failed to start worker process. Expected to read port from stdout, got "" instead. ERROR: Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] (::QuartoNotebookRunner.Malt.var"#8#9"{Cmd, Vector{String}})(temp_dir::String) @ QuartoNotebookRunner.Malt ~/.julia/packages/QuartoNotebookRunner/fVEXT/src/Malt.jl:155 [3] mktempdir(fn::QuartoNotebookRunner.Malt.var"#8#9"{Cmd, Vector{String}}, parent::String; prefix::String) @ Base.Filesystem ./file.jl:899 [4] mktempdir (repeats 2 times) @ ./file.jl:895 [inlined] [5] QuartoNotebookRunner.Malt.Worker(; exe::Cmd, env::Vector{String}, exeflags::Vector{String}) @ QuartoNotebookRunner.Malt ~/.julia/packages/QuartoNotebookRunner/fVEXT/src/Malt.jl:87 [6] Worker @ ~/.julia/packages/QuartoNotebookRunner/fVEXT/src/Malt.jl:86 [inlined] [7] #2 @ ~/.julia/packages/QuartoNotebookRunner/fVEXT/src/server.jl:33 [inlined] [8] cd(f::QuartoNotebookRunner.var"#2#3"{Vector{String}, Cmd, Vector{String}}, dir::String) @ Base.Filesystem ./file.jl:112 [9] QuartoNotebookRunner.File(path::String, options::Dict{String, Any}) @ QuartoNotebookRunner ~/.julia/packages/QuartoNotebookRunner/fVEXT/src/server.jl:32 [10] (::QuartoNotebookRunner.var"#44#45"{Bool, Dict{String, Any}, Server, String})() @ QuartoNotebookRunner ~/.julia/packages/QuartoNotebookRunner/fVEXT/src/server.jl:1570 [11] lock(f::QuartoNotebookRunner.var"#44#45"{Bool, Dict{String, Any}, Server, String}, l::ReentrantLock) @ Base ./lock.jl:335 [12] borrow_file!(f::QuartoNotebookRunner.var"#35#36"{Nothing, Nothing, Bool, Dict{String, Any}, QuartoNotebookRunner.var"#run!##2#run!##3", Server}, server::Server, path::String; wait::Bool, optionally_create::Bool, options::Dict{String, Any}) @ QuartoNotebookRunner ~/.julia/packages/QuartoNotebookRunner/fVEXT/src/server.jl:1563 [13] run!(server::Server, path::String; output::Nothing, markdown::Nothing, showprogress::Bool, options::Dict{String, Any}, chunk_callback::Function) @ QuartoNotebookRunner ~/.julia/packages/QuartoNotebookRunner/fVEXT/src/server.jl:1469 [14] run! @ ~/.julia/packages/QuartoNotebookRunner/fVEXT/src/server.jl:1459 [inlined] [15] (::var"#94#95")(newfile::String) @ Main ~/.julia/packages/QuartoNotebookRunner/fVEXT/test/testsets/exeflags_merging.jl:40 [16] #with_replacement_file##1 @ ~/.julia/packages/QuartoNotebookRunner/fVEXT/test/testsets/exeflags_merging.jl:12 [inlined] [17] mktempdir(fn::var"#with_replacement_file##1#with_replacement_file##2"{var"#94#95", String, Tuple{Pair{String, String}}, String}, parent::String; prefix::String) @ Base.Filesystem ./file.jl:899 [18] mktempdir (repeats 2 times) @ ./file.jl:895 [inlined] [19] with_replacement_file @ ~/.julia/packages/QuartoNotebookRunner/fVEXT/test/testsets/exeflags_merging.jl:7 [inlined] [20] (::var"#90#91"{String, var"#with_replacement_file#with_replacement_file##0"})() @ Main ~/.julia/packages/QuartoNotebookRunner/fVEXT/test/testsets/exeflags_merging.jl:38 [21] withenv(f::var"#90#91"{String, var"#with_replacement_file#with_replacement_file##0"}, keyvals::Pair{String, String}) @ Base ./env.jl:265 [22] top-level scope @ ~/.julia/packages/QuartoNotebookRunner/fVEXT/test/testsets/exeflags_merging.jl:5 [23] macro expansion @ /opt/julia/share/julia/stdlib/v1.12/Test/src/Test.jl:1776 [inlined] [24] macro expansion @ ~/.julia/packages/QuartoNotebookRunner/fVEXT/test/testsets/exeflags_merging.jl:18 [inlined] [25] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:306 [26] macro expansion @ ~/.julia/packages/QuartoNotebookRunner/fVEXT/test/runtests.jl:10 [inlined] [27] macro expansion @ /opt/julia/share/julia/stdlib/v1.12/Test/src/Test.jl:1776 [inlined] [28] top-level scope @ ~/.julia/packages/QuartoNotebookRunner/fVEXT/test/runtests.jl:6 [29] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:306 [30] top-level scope @ none:6 [31] eval(m::Module, e::Any) @ Core ./boot.jl:489 [32] exec_options(opts::Base.JLOptions) @ Base ./client.jl:287 [33] _start() @ Base ./client.jl:554 [ Info: Testing examples/include.qmd ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 19 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 poptask at ./task.jl:1187 wait at ./task.jl:1199 #wait#398 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] #copyuntil#646 at ./stream.jl:1045 copyuntil at ./stream.jl:1029 unknown function (ip: 0x77d7edb6d3d7) at (unknown file) _jl_invoke at /source/src/gf.c:4005 [inlined] ijl_apply_generic at /source/src/gf.c:4205 #copyuntil#331 at ./io.jl:464 copyuntil at ./io.jl:464 [inlined] #copyline#394 at ./iobuffer.jl:942 copyline at ./iobuffer.jl:918 [inlined] #readline#354 at ./io.jl:619 readline at ./io.jl:619 unknown function (ip: 0x77d7edb6cfe2) at (unknown file) _jl_invoke at /source/src/gf.c:4005 [inlined] ijl_apply_generic at /source/src/gf.c:4205 #8 at /home/pkgeval/.julia/packages/QuartoNotebookRunner/fVEXT/src/Malt.jl:115 #mktempdir#21 at ./file.jl:899 mktempdir at ./file.jl:895 [inlined] mktempdir at ./file.jl:895 [inlined] _ at /home/pkgeval/.julia/packages/QuartoNotebookRunner/fVEXT/src/Malt.jl:87 Worker at /home/pkgeval/.julia/packages/QuartoNotebookRunner/fVEXT/src/Malt.jl:86 [inlined] #2 at /home/pkgeval/.julia/packages/QuartoNotebookRunner/fVEXT/src/server.jl:33 [inlined] cd at ./file.jl:112 unknown function (ip: 0x77d7edb57ced) at (unknown file) _jl_invoke at /source/src/gf.c:4005 [inlined] ijl_apply_generic at /source/src/gf.c:4205 File at /home/pkgeval/.julia/packages/QuartoNotebookRunner/fVEXT/src/server.jl:32 #44 at /home/pkgeval/.julia/packages/QuartoNotebookRunner/fVEXT/src/server.jl:1570 lock at ./lock.jl:335 #borrow_file!#41 at /home/pkgeval/.julia/packages/QuartoNotebookRunner/fVEXT/src/server.jl:1563 unknown function (ip: 0x77d7edbbe525) at (unknown file) _jl_invoke at /source/src/gf.c:4005 [inlined] ijl_apply_generic at /source/src/gf.c:4205 borrow_file! at /home/pkgeval/.julia/packages/QuartoNotebookRunner/fVEXT/src/server.jl:1553 #run!#29 at /home/pkgeval/.julia/packages/QuartoNotebookRunner/fVEXT/src/server.jl:1469 run! at /home/pkgeval/.julia/packages/QuartoNotebookRunner/fVEXT/src/server.jl:1459 [inlined] macro expansion at /home/pkgeval/.julia/packages/QuartoNotebookRunner/fVEXT/test/utilities/prelude.jl:28 [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.12/Test/src/Test.jl:1776 [inlined] test_example at /home/pkgeval/.julia/packages/QuartoNotebookRunner/fVEXT/test/utilities/prelude.jl:26 _jl_invoke at /source/src/gf.c:4005 [inlined] ijl_apply_generic at /source/src/gf.c:4205 test_example at /home/pkgeval/.julia/packages/QuartoNotebookRunner/fVEXT/test/utilities/prelude.jl:18 unknown function (ip: 0x77d7edba7356) at (unknown file) _jl_invoke at /source/src/gf.c:4005 [inlined] ijl_apply_generic at /source/src/gf.c:4205 jl_apply at /source/src/julia.h:2381 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:693 jl_interpret_toplevel_thunk at /source/src/interpreter.c:898 jl_toplevel_eval_flex at /source/src/toplevel.c:1035 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 include_string at ./loading.jl:2843 _jl_invoke at /source/src/gf.c:4005 [inlined] ijl_apply_generic at /source/src/gf.c:4205 _include at ./loading.jl:2903 include at ./Base.jl:306 IncludeInto at ./Base.jl:307 jfptr_IncludeInto_81501.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4005 [inlined] ijl_apply_generic at /source/src/gf.c:4205 macro expansion at /home/pkgeval/.julia/packages/QuartoNotebookRunner/fVEXT/test/runtests.jl:10 [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.12/Test/src/Test.jl:1776 [inlined] top-level scope at /home/pkgeval/.julia/packages/QuartoNotebookRunner/fVEXT/test/runtests.jl:6 _jl_invoke at /source/src/gf.c:4005 [inlined] ijl_invoke at /source/src/gf.c:4012 jl_toplevel_eval_flex at /source/src/toplevel.c:1024 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 include_string at ./loading.jl:2843 _jl_invoke at /source/src/gf.c:4005 [inlined] ijl_apply_generic at /source/src/gf.c:4205 _include at ./loading.jl:2903 include at ./Base.jl:306 IncludeInto at ./Base.jl:307 jfptr_IncludeInto_81501.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4005 [inlined] ijl_apply_generic at /source/src/gf.c:4205 jl_apply at /source/src/julia.h:2381 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:693 jl_interpret_toplevel_thunk at /source/src/interpreter.c:898 jl_toplevel_eval_flex at /source/src/toplevel.c:1035 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 exec_options at ./client.jl:287 _start at ./client.jl:554 jfptr__start_103313.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4005 [inlined] ijl_apply_generic at /source/src/gf.c:4205 jl_apply at /source/src/julia.h:2381 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1139 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x77d819de3249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.12/Profile/src/Profile.jl:1362 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x000077d7ffbfc010 Total snapshots: 771. Utilization: 0% ╎771 @Base/client.jl:554 _start() ╎ 771 @Base/client.jl:287 exec_options(opts::Base.JLOptions) ╎ 771 @Base/boot.jl:489 eval(m::Module, e::Any) ╎ 771 @Base/Base.jl:307 (::Base.IncludeInto)(fname::String) ╎ 771 @Base/Base.jl:306 include(mapexpr::Function, mod::Module, _path::S… ╎ 771 @Base/loading.jl:2903 _include(mapexpr::Function, mod::Module, _p… ╎ ╎ 771 @Base/loading.jl:2843 include_string(mapexpr::typeof(identity), … ╎ ╎ 771 @Base/boot.jl:489 eval(m::Module, e::Any) ╎ ╎ 771 …XT/test/runtests.jl:6 top-level scope ╎ ╎ 771 @Test/src/Test.jl:1776 macro expansion ╎ ╎ 771 …T/test/runtests.jl:10 macro expansion ╎ ╎ ╎ 771 @Base/Base.jl:307 (::Base.IncludeInto)(fname::String) ╎ ╎ ╎ 771 @Base/Base.jl:306 include(mapexpr::Function, mod::Module, … ╎ ╎ ╎ 771 @Base/loading.jl:2903 _include(mapexpr::Function, mod::Mo… ╎ ╎ ╎ 771 @Base/loading.jl:2843 include_string(mapexpr::typeof(ide… ╎ ╎ ╎ 771 @Base/boot.jl:489 eval(m::Module, e::Any) ╎ ╎ ╎ ╎ 771 …ties/prelude.jl:18 test_example(f::Function, each::St… ╎ ╎ ╎ ╎ 771 …ties/prelude.jl:26 test_example(f::var"#97#98", each… ╎ ╎ ╎ ╎ 771 @Test/…c/Test.jl:1776 macro expansion ╎ ╎ ╎ ╎ 771 …ies/prelude.jl:28 macro expansion ╎ ╎ ╎ ╎ 771 @QuartoNotebookRunner/…:1459 run! ╎ ╎ ╎ ╎ ╎ 771 @QuartoNotebookRunner/…:1469 run!(server::Server,… ╎ ╎ ╎ ╎ ╎ 771 @QuartoNotebookRunner/…:1553 kwcall(::@NamedTupl… ╎ ╎ ╎ ╎ ╎ 771 @QuartoNotebookRunner/…:1563 borrow_file!(f::Qu… ╎ ╎ ╎ ╎ ╎ 771 @Base/lock.jl:335 lock(f::QuartoNotebookRunner… ╎ ╎ ╎ ╎ ╎ 771 @QuartoNotebookRunner/…:1570 (::QuartoNoteboo… ╎ ╎ ╎ ╎ ╎ ╎ 771 @QuartoNotebookRunner/…:32 QuartoNotebookRun… ╎ ╎ ╎ ╎ ╎ ╎ 771 @Base/…le.jl:112 cd(f::QuartoNotebookRunner… ╎ ╎ ╎ ╎ ╎ ╎ 771 @QuartoNotebookRunner/…:33 #2 ╎ ╎ ╎ ╎ ╎ ╎ 771 @QuartoNotebookRunner/…:86 Worker ╎ ╎ ╎ ╎ ╎ ╎ 771 @QuartoNotebookRunner/…:87 QuartoNoteboo… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 771 @Base/…le.jl:895 mktempdir ╎ ╎ ╎ ╎ ╎ ╎ ╎ 771 @Base/…le.jl:895 mktempdir ╎ ╎ ╎ ╎ ╎ ╎ ╎ 771 @Base/…le.jl:899 mktempdir(fn::Quarto… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 771 @QuartoNotebookRunner/…:115 (::Quart… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 771 @Base/io.jl:619 readline(s::Base.Pr… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ 771 @Base/io.jl:619 readline(s::Base.P… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ 771 @Base/…er.jl:918 copyline ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ 771 @Base/…er.jl:942 copyline(out::I… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ 771 @Base/io.jl:464 copyuntil ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ 771 @Base/io.jl:464 copyuntil(out:… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +1 771 @Base/…am.jl:1029 kwcall(::@Na… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +2 771 @Base/…am.jl:1045 copyuntil(ou… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +3 771 @Base/…on.jl:136 wait ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +4 771 @Base/…on.jl:141 wait(c::Base.… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +5 771 @Base/…sk.jl:1199 wait() 770╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +6 771 @Base/…sk.jl:1187 poptask(W::B… ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 poptask at ./task.jl:1187 wait at ./task.jl:1199 #wait#398 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] wait at ./process.jl:694 wait at ./process.jl:687 jfptr_wait_88991.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4005 [inlined] ijl_apply_generic at /source/src/gf.c:4205 subprocess_handler at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2445 unknown function (ip: 0x778e06580a63) at (unknown file) _jl_invoke at /source/src/gf.c:4005 [inlined] ijl_apply_generic at /source/src/gf.c:4205 #204 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2385 withenv at ./env.jl:265 #189 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2204 with_temp_env at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2062 #185 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2171 #mktempdir#21 at ./file.jl:899 unknown function (ip: 0x778e06575edc) at (unknown file) _jl_invoke at /source/src/gf.c:4005 [inlined] ijl_apply_generic at /source/src/gf.c:4205 mktempdir at ./file.jl:895 mktempdir at ./file.jl:895 #sandbox#181 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2118 [inlined] sandbox at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2110 unknown function (ip: 0x778e0656c5b1) at (unknown file) _jl_invoke at /source/src/gf.c:4005 [inlined] ijl_apply_generic at /source/src/gf.c:4205 #test#192 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2370 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2280 [inlined] #test#170 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:483 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:462 unknown function (ip: 0x778e0656c1e1) at (unknown file) _jl_invoke at /source/src/gf.c:4005 [inlined] ijl_apply_generic at /source/src/gf.c:4205 #test#84 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:164 unknown function (ip: 0x778e06562730) at (unknown file) _jl_invoke at /source/src/gf.c:4005 [inlined] ijl_apply_generic at /source/src/gf.c:4205 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:153 #test#82 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:152 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:152 [inlined] #test#81 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:151 [inlined] test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:151 unknown function (ip: 0x778e0656109f) at (unknown file) _jl_invoke at /source/src/gf.c:4005 [inlined] ijl_apply_generic at /source/src/gf.c:4205 jl_apply at /source/src/julia.h:2381 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:693 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 jl_interpret_toplevel_thunk at /source/src/interpreter.c:898 jl_toplevel_eval_flex at /source/src/toplevel.c:1035 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 include_string at ./loading.jl:2843 _jl_invoke at /source/src/gf.c:4005 [inlined] ijl_apply_generic at /source/src/gf.c:4205 _include at ./loading.jl:2903 include at ./Base.jl:305 exec_options at ./client.jl:321 _start at ./client.jl:554 jfptr__start_103313.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4005 [inlined] ijl_apply_generic at /source/src/gf.c:4205 jl_apply at /source/src/julia.h:2381 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1139 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x778e22410249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.12/Profile/src/Profile.jl:1362 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x0000778e081fc010 Total snapshots: 398. Utilization: 0% ╎398 @Base/client.jl:554 _start() ╎ 398 @Base/client.jl:321 exec_options(opts::Base.JLOptions) ╎ 398 @Base/Base.jl:305 include(mod::Module, _path::String) ╎ 398 @Base/loading.jl:2903 _include(mapexpr::Function, mod::Module, _pat… ╎ 398 @Base/loading.jl:2843 include_string(mapexpr::typeof(identity), mo… ╎ 398 @Base/boot.jl:489 eval(m::Module, e::Any) ╎ ╎ 398 @Pkg/src/API.jl:151 kwcall(::@NamedTuple{julia_args::Cmd}, ::typ… ╎ ╎ 398 @Pkg/src/API.jl:151 #test#81 ╎ ╎ 398 @Pkg/src/API.jl:152 test ╎ ╎ 398 @Pkg/src/API.jl:152 test(pkgs::Vector{String}; kwargs::Base.P… ╎ ╎ 398 @Pkg/src/API.jl:153 kwcall(::@NamedTuple{julia_args::Cmd}, :… ╎ ╎ ╎ 398 @Pkg/src/API.jl:164 test(pkgs::Vector{PackageSpec}; io::IOC… ╎ ╎ ╎ 398 @Pkg/src/API.jl:462 kwcall(::@NamedTuple{julia_args::Cmd, … ╎ ╎ ╎ 398 @Pkg/src/API.jl:483 test(ctx::Pkg.Types.Context, pkgs::Ve… ╎ ╎ ╎ 398 @Pkg/…erations.jl:2280 test ╎ ╎ ╎ 398 @Pkg/…erations.jl:2370 test(ctx::Pkg.Types.Context, pkg… ╎ ╎ ╎ ╎ 398 @Pkg/…rations.jl:2110 kwcall(::@NamedTuple{preferences… ╎ ╎ ╎ ╎ 398 @Pkg/…rations.jl:2118 #sandbox#181 ╎ ╎ ╎ ╎ 398 @Base/file.jl:895 mktempdir(fn::Function) ╎ ╎ ╎ ╎ 398 @Base/file.jl:895 mktempdir(fn::Function, parent::S… ╎ ╎ ╎ ╎ 398 @Base/file.jl:899 mktempdir(fn::Pkg.Operations.var… ╎ ╎ ╎ ╎ ╎ 398 @Pkg/…tions.jl:2171 (::Pkg.Operations.var"#185#18… ╎ ╎ ╎ ╎ ╎ 398 @Pkg/…tions.jl:2062 with_temp_env(fn::Pkg.Operat… ╎ ╎ ╎ ╎ ╎ 398 @Pkg/…tions.jl:2204 (::Pkg.Operations.var"#189#… ╎ ╎ ╎ ╎ ╎ 398 @Base/env.jl:265 withenv(::Pkg.Operations.var"… ╎ ╎ ╎ ╎ ╎ 398 @Pkg/…ions.jl:2385 (::Pkg.Operations.var"#204… ╎ ╎ ╎ ╎ ╎ ╎ 398 @Pkg/…ons.jl:2445 subprocess_handler(cmd::Cm… ╎ ╎ ╎ ╎ ╎ ╎ 398 @Base/…ss.jl:687 wait(x::Base.Process) ╎ ╎ ╎ ╎ ╎ ╎ 398 @Base/…ss.jl:694 wait(x::Base.Process, syn… ╎ ╎ ╎ ╎ ╎ ╎ 398 @Base/…on.jl:136 wait ╎ ╎ ╎ ╎ ╎ ╎ 398 @Base/…on.jl:141 wait(c::Base.GenericCon… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 398 @Base/…sk.jl:1199 wait() 397╎ ╎ ╎ ╎ ╎ ╎ ╎ 398 @Base/…sk.jl:1187 poptask(W::Base.Intr… [19] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/QuartoNotebookRunner/fVEXT/test/testsets/include.jl:3 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 poptask at ./task.jl:1187 wait at ./task.jl:1199 #wait#398 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] _trywait at ./asyncevent.jl:185 wait at ./asyncevent.jl:202 [inlined] sleep at ./asyncevent.jl:312 [inlined] #_exit_loop##0 at /home/pkgeval/.julia/packages/QuartoNotebookRunner/fVEXT/src/Malt.jl:289 unknown function (ip: 0x77d7edbd734f) at (unknown file) _jl_invoke at /source/src/gf.c:4005 [inlined] ijl_apply_generic at /source/src/gf.c:4205 jl_apply at /source/src/julia.h:2381 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) Allocations: 59511999 (Pool: 59507217; Big: 4782); GC: 69 [1520] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/QuartoNotebookRunner/fVEXT/src/startup.jl:175 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 examples/include.qmd: Test Failed at /home/pkgeval/.julia/packages/QuartoNotebookRunner/fVEXT/test/utilities/prelude.jl:76 Expression: success(`$quarto_bin render $ipynb --no-execute --to docx`) Stacktrace: [1] macro expansion @ /opt/julia/share/julia/stdlib/v1.12/Test/src/Test.jl:680 [inlined] [2] macro expansion @ ~/.julia/packages/QuartoNotebookRunner/fVEXT/test/utilities/prelude.jl:76 [inlined] [3] macro expansion @ /opt/julia/share/julia/stdlib/v1.12/Test/src/Test.jl:1776 [inlined] [4] test_example(f::var"#97#98", each::String, options::Dict{String, Any}) @ Main ~/.julia/packages/QuartoNotebookRunner/fVEXT/test/utilities/prelude.jl:26 PkgEval terminated after 2769.18s: test duration exceeded the time limit