Package evaluation of LaplacianExpectationMaximization on Julia 1.12.0-rc2.1 (1fad90817e*) started at 2025-09-11T11:40:38.476 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 8.82s ################################################################################ # Installation # Installing LaplacianExpectationMaximization... Resolving package versions... Updating `~/.julia/environments/v1.12/Project.toml` [610349f3] + LaplacianExpectationMaximization v0.1.0 Updating `~/.julia/environments/v1.12/Manifest.toml` [47edcb42] + ADTypes v1.17.0 [79e6a3ab] + Adapt v4.3.0 [66dad0bd] + AliasTables v1.1.3 [4fba245c] + ArrayInterface v7.20.0 [d360d2e6] + ChainRulesCore v1.26.0 [bbf7d656] + CommonSubexpressions v0.3.1 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.18.0 [b0b7db55] + ComponentArrays v0.15.29 [2569d6c7] + ConcreteStructs v0.2.3 [187b0558] + ConstructionBase v1.6.0 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.19.1 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [a0c0ee7d] + DifferentiationInterface v0.7.7 [31c24e10] + Distributions v0.25.120 [ffbed154] + DocStringExtensions v0.9.5 [4e289a0a] + EnumX v1.0.5 [5789e2e9] + FileIO v1.17.0 [1a297f60] + FillArrays v1.14.0 [6a86dc24] + FiniteDiff v2.28.1 ⌅ [f6369f11] + ForwardDiff v0.10.38 [d9f16b24] + Functors v0.5.2 [076d061b] + HashArrayMappedTries v0.2.0 [34004b35] + HypergeometricFunctions v0.3.28 [615f187c] + IfElse v0.1.1 [92d709cd] + IrrationalConstants v0.2.4 ⌅ [033835bb] + JLD2 v0.5.15 [692b3bcd] + JLLWrappers v1.7.1 [610349f3] + LaplacianExpectationMaximization v0.1.0 [d3d80556] + LineSearches v7.4.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [1914dd2f] + MacroTools v0.5.16 [e1d29d7a] + Missings v1.2.0 [d41bc354] + NLSolversBase v7.10.0 [77ba4419] + NaNMath v1.1.3 [429524aa] + Optim v1.13.2 [3bd65402] + Optimisers v0.4.6 [65fa8838] + OptimizationCallbacks v0.1.0 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.35 [d96e819e] + Parameters v0.12.3 [85a6dd25] + PositiveFactorizations v0.2.4 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.0 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.8.0 [7e506255] + ScopedValues v1.5.0 [efcf1570] + Setfield v1.1.2 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.5.1 [aedffcd0] + Static v1.2.0 [0d7ed370] + StaticArrayInterface v1.8.0 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 [2913bbd2] + StatsBase v0.34.6 [4c63d2b9] + StatsFuns v1.5.0 [3bb67fe8] + TranscodingStreams v0.11.3 [3a884ed6] + UnPack v1.0.2 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.6.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.12.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.11.1+1 [e37daf67] + LibGit2_jll v1.9.0+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.5.20 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.1+0 [bea87d4a] + SuiteSparse_jll v7.8.3+2 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.13.1+1 [8e850ede] + nghttp2_jll v1.64.0+1 [3f19e933] + p7zip_jll v17.5.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 5.57s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 674.74s ################################################################################ # Testing # Testing LaplacianExpectationMaximization Test Could not use exact versions of packages in manifest. Re-resolving dependencies Updating `/tmp/jl_tqVC71/Project.toml` [47edcb42] ↑ ADTypes v1.11.0 ⇒ v1.17.0 [4c88cf16] ↑ Aqua v0.8.9 ⇒ v0.8.14 [b0b7db55] ↑ ComponentArrays v0.15.19 ⇒ v0.15.29 [31c24e10] ↑ Distributions v0.25.113 ⇒ v0.25.120 [7da242da] ↑ Enzyme v0.13.16 ⇒ v0.13.73 [6a86dc24] ↑ FiniteDiff v2.26.2 ⇒ v2.28.1 [c3a54625] ↑ JET v0.9.12 ⇒ v0.10.7 ⌅ [033835bb] ↑ JLD2 v0.5.10 ⇒ v0.5.15 [610349f3] + LaplacianExpectationMaximization v0.1.0 [2ab3a3ac] ↑ LogExpFunctions v0.3.28 ⇒ v0.3.29 [76087f3c] ↑ NLopt v1.1.1 ⇒ v1.2.1 [3bd65402] ↑ Optimisers v0.4.1 ⇒ v0.4.6 [7f7a1694] ↑ Optimization v4.0.5 ⇒ v4.6.0 [36348300] ↑ OptimizationOptimJL v0.4.1 ⇒ v0.4.3 Updating `/tmp/jl_tqVC71/Manifest.toml` [47edcb42] ↑ ADTypes v1.11.0 ⇒ v1.17.0 [7d9f7c33] ↑ Accessors v0.1.38 ⇒ v0.1.42 [79e6a3ab] ↑ Adapt v4.1.1 ⇒ v4.3.0 [4c88cf16] ↑ Aqua v0.8.9 ⇒ v0.8.14 [4fba245c] ↑ ArrayInterface v7.17.1 ⇒ v7.20.0 [d360d2e6] ↑ ChainRulesCore v1.25.0 ⇒ v1.26.0 [da1fd8a2] ↑ CodeTracking v1.3.6 ⇒ v2.0.0 [34da2185] ↑ Compat v4.16.0 ⇒ v4.18.0 [807dbc54] + Compiler v0.1.1 [b0b7db55] ↑ ComponentArrays v0.15.19 ⇒ v0.15.29 [187b0558] ↑ ConstructionBase v1.5.8 ⇒ v1.6.0 [864edb3b] ↑ DataStructures v0.18.20 ⇒ v0.19.1 [e2d170a0] - DataValueInterfaces v1.0.0 [a0c0ee7d] ↑ DifferentiationInterface v0.6.23 ⇒ v0.7.7 [31c24e10] ↑ Distributions v0.25.113 ⇒ v0.25.120 [ffbed154] ↑ DocStringExtensions v0.9.3 ⇒ v0.9.5 [4e289a0a] ↑ EnumX v1.0.4 ⇒ v1.0.5 [7da242da] ↑ Enzyme v0.13.16 ⇒ v0.13.73 [f151be2c] ↑ EnzymeCore v0.8.6 ⇒ v0.8.13 [6b7a57c9] - Expronicon v0.8.5 [55351af7] + ExproniconLite v0.10.14 [5789e2e9] ↑ FileIO v1.16.6 ⇒ v1.17.0 [1a297f60] ↑ FillArrays v1.13.0 ⇒ v1.14.0 [6a86dc24] ↑ FiniteDiff v2.26.2 ⇒ v2.28.1 [d9f16b24] ↑ Functors v0.5.1 ⇒ v0.5.2 [61eb1bfa] ↑ GPUCompiler v1.0.1 ⇒ v1.6.1 [076d061b] + HashArrayMappedTries v0.2.0 [34004b35] ↑ HypergeometricFunctions v0.3.25 ⇒ v0.3.28 [92d709cd] ↑ IrrationalConstants v0.2.2 ⇒ v0.2.4 [c3a54625] ↑ JET v0.9.12 ⇒ v0.10.7 ⌅ [033835bb] ↑ JLD2 v0.5.10 ⇒ v0.5.15 [692b3bcd] ↑ JLLWrappers v1.6.1 ⇒ v1.7.1 [ae98c720] + Jieko v0.2.1 [aa1ae85d] ↑ JuliaInterpreter v0.9.38 ⇒ v0.10.5 [70703baa] + JuliaSyntax v1.0.2 [929cbde3] ↑ LLVM v9.1.3 ⇒ v9.4.2 [610349f3] + LaplacianExpectationMaximization v0.1.0 [1d6d02ad] ↑ LeftChildRightSiblingTrees v0.2.0 ⇒ v0.2.1 [d3d80556] ↑ LineSearches v7.3.0 ⇒ v7.4.0 [2ab3a3ac] ↑ LogExpFunctions v0.3.28 ⇒ v0.3.29 [6f1432cf] ↑ LoweredCodeUtils v3.1.0 ⇒ v3.4.3 [d8e11817] - MLStyle v0.4.17 [1914dd2f] ↑ MacroTools v0.5.13 ⇒ v0.5.16 [2e0e35c7] + Moshi v0.3.7 [d41bc354] ↑ NLSolversBase v7.8.3 ⇒ v7.10.0 [76087f3c] ↑ NLopt v1.1.1 ⇒ v1.2.1 [77ba4419] ↑ NaNMath v1.0.2 ⇒ v1.1.3 [d8793406] ↑ ObjectFile v0.4.2 ⇒ v0.5.0 [429524aa] ↑ Optim v1.10.0 ⇒ v1.13.2 [3bd65402] ↑ Optimisers v0.4.1 ⇒ v0.4.6 [7f7a1694] ↑ Optimization v4.0.5 ⇒ v4.6.0 [bca83a33] ↑ OptimizationBase v2.4.0 ⇒ v2.10.0 [65fa8838] + OptimizationCallbacks v0.1.0 [36348300] ↑ OptimizationOptimJL v0.4.1 ⇒ v0.4.3 [bac558e1] ↑ OrderedCollections v1.6.3 ⇒ v1.8.1 [90014a1f] ↑ PDMats v0.11.31 ⇒ v0.11.35 [d236fae5] + PreallocationTools v0.4.34 [aea7be01] ↑ PrecompileTools v1.2.1 ⇒ v1.3.3 [21216c6a] ↑ Preferences v1.4.3 ⇒ v1.5.0 [33c8b6b6] ↑ ProgressLogging v0.1.4 ⇒ v0.1.5 [92933f4c] ↑ ProgressMeter v1.10.2 ⇒ v1.11.0 [43287f4e] ↑ PtrArrays v1.2.1 ⇒ v1.3.0 [1fd47b50] ↑ QuadGK v2.11.1 ⇒ v2.11.2 [731186ca] ↑ RecursiveArrayTools v3.27.4 ⇒ v3.37.1 [ae029012] ↑ Requires v1.3.0 ⇒ v1.3.1 [7e49a35a] ↑ RuntimeGeneratedFunctions v0.5.13 ⇒ v0.5.15 [0bca4576] ↑ SciMLBase v2.64.0 ⇒ v2.117.1 [c0aeaf25] ↑ SciMLOperators v0.3.12 ⇒ v1.7.1 [53ae85a6] ↑ SciMLStructures v1.6.1 ⇒ v1.7.0 [7e506255] + ScopedValues v1.5.0 [6c6a2e73] ↑ Scratch v1.2.1 ⇒ v1.3.0 [efcf1570] ↑ Setfield v1.1.1 ⇒ v1.1.2 [a2af1166] ↑ SortingAlgorithms v1.2.1 ⇒ v1.2.2 [9f842d2f] ↑ SparseConnectivityTracer v0.6.9 ⇒ v1.0.2 [0a514795] ↑ SparseMatrixColorings v0.4.10 ⇒ v0.4.21 [276daf66] ↑ SpecialFunctions v2.4.0 ⇒ v2.5.1 [aedffcd0] ↑ Static v1.1.1 ⇒ v1.2.0 [82ae8749] ↑ StatsAPI v1.7.0 ⇒ v1.7.1 [2913bbd2] ↑ StatsBase v0.34.3 ⇒ v0.34.6 [4c63d2b9] ↑ StatsFuns v1.3.2 ⇒ v1.5.0 [2efcf032] ↑ SymbolicIndexingInterface v0.3.35 ⇒ v0.3.43 [3783bdb8] - TableTraits v1.0.1 [bd369af6] - Tables v1.12.0 [a759f4b9] - TimerOutputs v0.5.25 [e689c965] + Tracy v0.1.6 [7cc45869] ↑ Enzyme_jll v0.0.165+0 ⇒ v0.0.195+0 [dad2f222] ↑ LLVMExtra_jll v0.0.34+0 ⇒ v0.0.37+2 [ad6e5548] + LibTracyClient_jll v0.9.1+6 [c8ffd9c3] - MbedTLS_jll v2.28.6+0 [079eb43e] ↑ NLopt_jll v2.8.0+0 ⇒ v2.10.0+0 [efe28fd5] ↑ OpenSpecFun_jll v0.5.5+0 ⇒ v0.5.6+0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [37e2e46d] ↑ LinearAlgebra v1.11.0 ⇒ v1.12.0 [ca575930] ↑ NetworkOptions v1.2.0 ⇒ v1.3.0 [44cfe95a] ↑ Pkg v1.11.0 ⇒ v1.12.0 [2f01184e] ↑ SparseArrays v1.11.0 ⇒ v1.12.0 [f489334b] + StyledStrings v1.11.0 [e66e0078] ↑ CompilerSupportLibraries_jll v1.1.1+0 ⇒ v1.3.0+1 [deac9b47] ↑ LibCURL_jll v8.6.0+0 ⇒ v8.11.1+1 [e37daf67] ↑ LibGit2_jll v1.7.2+0 ⇒ v1.9.0+0 [29816b5a] ↑ LibSSH2_jll v1.11.0+1 ⇒ v1.11.3+1 [14a3606d] ↑ MozillaCACerts_jll v2023.12.12 ⇒ v2025.5.20 [4536629a] ↑ OpenBLAS_jll v0.3.27+1 ⇒ v0.3.29+0 [05823500] ↑ OpenLibm_jll v0.8.1+2 ⇒ v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.1+0 [bea87d4a] ↑ SuiteSparse_jll v7.7.0+0 ⇒ v7.8.3+2 [83775a58] ↑ Zlib_jll v1.2.13+1 ⇒ v1.3.1+2 [8e850b90] ↑ libblastrampoline_jll v5.11.0+0 ⇒ v5.13.1+1 [8e850ede] ↑ nghttp2_jll v1.59.0+0 ⇒ v1.64.0+1 [3f19e933] ↑ p7zip_jll v17.4.0+2 ⇒ v17.5.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Test Successfully re-resolved Status `/tmp/jl_tqVC71/Project.toml` [47edcb42] ADTypes v1.17.0 [4c88cf16] Aqua v0.8.14 [b0b7db55] ComponentArrays v0.15.29 [2569d6c7] ConcreteStructs v0.2.3 [31c24e10] Distributions v0.25.120 [7da242da] Enzyme v0.13.73 [6a86dc24] FiniteDiff v2.28.1 ⌅ [f6369f11] ForwardDiff v0.10.38 [c3a54625] JET v0.10.7 ⌅ [033835bb] JLD2 v0.5.15 [610349f3] LaplacianExpectationMaximization v0.1.0 [2ab3a3ac] LogExpFunctions v0.3.29 [76087f3c] NLopt v1.2.1 [3bd65402] Optimisers v0.4.6 [7f7a1694] Optimization v4.6.0 [36348300] OptimizationOptimJL v0.4.3 [10745b16] Statistics v1.11.1 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_tqVC71/Manifest.toml` [47edcb42] ADTypes v1.17.0 [1520ce14] AbstractTrees v0.4.5 [7d9f7c33] Accessors v0.1.42 [79e6a3ab] Adapt v4.3.0 [66dad0bd] AliasTables v1.1.3 [4c88cf16] Aqua v0.8.14 [4fba245c] ArrayInterface v7.20.0 [fa961155] CEnum v0.5.0 [d360d2e6] ChainRulesCore v1.26.0 [da1fd8a2] CodeTracking v2.0.0 [38540f10] CommonSolve v0.2.4 [bbf7d656] CommonSubexpressions v0.3.1 [f70d9fcc] CommonWorldInvalidations v1.0.0 [34da2185] Compat v4.18.0 [807dbc54] Compiler v0.1.1 [b0b7db55] ComponentArrays v0.15.29 [a33af91c] CompositionsBase v0.1.2 [2569d6c7] ConcreteStructs v0.2.3 [88cd18e8] ConsoleProgressMonitor v0.1.2 [187b0558] ConstructionBase v1.6.0 [9a962f9c] DataAPI v1.16.0 [864edb3b] DataStructures v0.19.1 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [a0c0ee7d] DifferentiationInterface v0.7.7 [31c24e10] Distributions v0.25.120 [ffbed154] DocStringExtensions v0.9.5 [4e289a0a] EnumX v1.0.5 [7da242da] Enzyme v0.13.73 [f151be2c] EnzymeCore v0.8.13 [e2ba6199] ExprTools v0.1.10 [55351af7] ExproniconLite v0.10.14 [9aa1b823] FastClosures v0.3.2 [5789e2e9] FileIO v1.17.0 [1a297f60] FillArrays v1.14.0 [6a86dc24] FiniteDiff v2.28.1 ⌅ [f6369f11] ForwardDiff v0.10.38 [069b7b12] FunctionWrappers v1.1.3 [77dc65aa] FunctionWrappersWrappers v0.1.3 [d9f16b24] Functors v0.5.2 [46192b85] GPUArraysCore v0.2.0 [61eb1bfa] GPUCompiler v1.6.1 [076d061b] HashArrayMappedTries v0.2.0 [34004b35] HypergeometricFunctions v0.3.28 [615f187c] IfElse v0.1.1 [3587e190] InverseFunctions v0.1.17 [92d709cd] IrrationalConstants v0.2.4 [82899510] IteratorInterfaceExtensions v1.0.0 [c3a54625] JET v0.10.7 ⌅ [033835bb] JLD2 v0.5.15 [692b3bcd] JLLWrappers v1.7.1 [ae98c720] Jieko v0.2.1 [aa1ae85d] JuliaInterpreter v0.10.5 [70703baa] JuliaSyntax v1.0.2 [5be7bae1] LBFGSB v0.4.1 [929cbde3] LLVM v9.4.2 [610349f3] LaplacianExpectationMaximization v0.1.0 [1d6d02ad] LeftChildRightSiblingTrees v0.2.1 [d3d80556] LineSearches v7.4.0 [2ab3a3ac] LogExpFunctions v0.3.29 [e6f89c97] LoggingExtras v1.1.0 [6f1432cf] LoweredCodeUtils v3.4.3 [1914dd2f] MacroTools v0.5.16 [e1d29d7a] Missings v1.2.0 [2e0e35c7] Moshi v0.3.7 [d41bc354] NLSolversBase v7.10.0 [76087f3c] NLopt v1.2.1 [77ba4419] NaNMath v1.1.3 [d8793406] ObjectFile v0.5.0 [429524aa] Optim v1.13.2 [3bd65402] Optimisers v0.4.6 [7f7a1694] Optimization v4.6.0 [bca83a33] OptimizationBase v2.10.0 [65fa8838] OptimizationCallbacks v0.1.0 [36348300] OptimizationOptimJL v0.4.3 [bac558e1] OrderedCollections v1.8.1 [90014a1f] PDMats v0.11.35 [d96e819e] Parameters v0.12.3 [85a6dd25] PositiveFactorizations v0.2.4 [d236fae5] PreallocationTools v0.4.34 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.0 [33c8b6b6] ProgressLogging v0.1.5 [92933f4c] ProgressMeter v1.11.0 [43287f4e] PtrArrays v1.3.0 [1fd47b50] QuadGK v2.11.2 [3cdcf5f2] RecipesBase v1.3.4 [731186ca] RecursiveArrayTools v3.37.1 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [79098fc4] Rmath v0.8.0 [7e49a35a] RuntimeGeneratedFunctions v0.5.15 [0bca4576] SciMLBase v2.117.1 [c0aeaf25] SciMLOperators v1.7.1 [53ae85a6] SciMLStructures v1.7.0 [7e506255] ScopedValues v1.5.0 [6c6a2e73] Scratch v1.3.0 [efcf1570] Setfield v1.1.2 [a2af1166] SortingAlgorithms v1.2.2 [9f842d2f] SparseConnectivityTracer v1.0.2 [0a514795] SparseMatrixColorings v0.4.21 [276daf66] SpecialFunctions v2.5.1 [aedffcd0] Static v1.2.0 [0d7ed370] StaticArrayInterface v1.8.0 [1e83bf80] StaticArraysCore v1.4.3 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.1 [2913bbd2] StatsBase v0.34.6 [4c63d2b9] StatsFuns v1.5.0 [53d494c1] StructIO v0.3.1 [2efcf032] SymbolicIndexingInterface v0.3.43 [5d786b92] TerminalLoggers v0.1.7 [e689c965] Tracy v0.1.6 [3bb67fe8] TranscodingStreams v0.11.3 [3a884ed6] UnPack v1.0.2 [7cc45869] Enzyme_jll v0.0.195+0 [dad2f222] LLVMExtra_jll v0.0.37+2 [81d17ec3] L_BFGS_B_jll v3.0.1+0 [ad6e5548] LibTracyClient_jll v0.9.1+6 [079eb43e] NLopt_jll v2.10.0+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.6.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.12.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.12.0 [f489334b] StyledStrings v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.11.1+1 [e37daf67] LibGit2_jll v1.9.0+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.5.20 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.7+0 [458c3c95] OpenSSL_jll v3.5.1+0 [bea87d4a] SuiteSparse_jll v7.8.3+2 [83775a58] Zlib_jll v1.3.1+2 [8e850b90] libblastrampoline_jll v5.13.1+1 [8e850ede] nghttp2_jll v1.64.0+1 [3f19e933] p7zip_jll v17.5.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Precompiling packages... 9386.4 ms ✓ RecursiveArrayTools 2129.7 ms ✓ RecursiveArrayTools → RecursiveArrayToolsSparseArraysExt 30394.4 ms ✓ SciMLBase 6388.1 ms ✓ OptimizationBase 6580.0 ms ✓ Optimization 5 dependencies successfully precompiled in 56 seconds. 98 already precompiled. Precompiling packages... 2211.6 ms ✓ ComponentArrays → ComponentArraysRecursiveArrayToolsExt 1 dependency successfully precompiled in 3 seconds. 41 already precompiled. Precompiling packages... 1824.4 ms ✓ RecursiveArrayTools → RecursiveArrayToolsForwardDiffExt 1 dependency successfully precompiled in 2 seconds. 44 already precompiled. Precompiling packages... 1399.1 ms ✓ PreallocationTools → PreallocationToolsForwardDiffExt 1 dependency successfully precompiled in 2 seconds. 27 already precompiled. Precompiling packages... 3517.4 ms ✓ SciMLBase → SciMLBaseChainRulesCoreExt 5769.7 ms ✓ ComponentArrays → ComponentArraysSciMLBaseExt 2 dependencies successfully precompiled in 10 seconds. 65 already precompiled. Precompiling packages... 6546.8 ms ✓ SciMLBase → SciMLBaseDistributionsExt 1 dependency successfully precompiled in 9 seconds. 90 already precompiled. Precompiling packages... 7079.8 ms ✓ SciMLBase → SciMLBaseForwardDiffExt 1 dependency successfully precompiled in 10 seconds. 68 already precompiled. Precompiling packages... 3530.1 ms ✓ SparseConnectivityTracer → SparseConnectivityTracerSpecialFunctionsExt 1 dependency successfully precompiled in 4 seconds. 21 already precompiled. Precompiling packages... 1326.2 ms ✓ OptimizationBase → OptimizationForwardDiffExt 1 dependency successfully precompiled in 2 seconds. 96 already precompiled. Precompiling packages... 13085.0 ms ✓ LaplacianExpectationMaximization → OptimizationExt 1 dependency successfully precompiled in 16 seconds. 184 already precompiled. Precompiling packages... 37169.3 ms ✓ OptimizationOptimJL 1 dependency successfully precompiled in 39 seconds. 145 already precompiled. Precompiling packages... 49179.8 ms ✓ QuadGK → QuadGKEnzymeExt 1 dependency successfully precompiled in 50 seconds. 50 already precompiled. Precompiling packages... 45437.2 ms ✓ SciMLBase → SciMLBaseEnzymeExt 1 dependency successfully precompiled in 47 seconds. 93 already precompiled. Precompiling packages... 45478.6 ms ✓ DifferentiationInterface → DifferentiationInterfaceEnzymeExt 51779.1 ms ✓ OptimizationBase → OptimizationEnzymeExt 2 dependencies successfully precompiled in 98 seconds. 110 already precompiled. Precompiling packages... 40899.9 ms ✓ Enzyme → EnzymeLogExpFunctionsExt 1 dependency successfully precompiled in 41 seconds. 50 already precompiled. Precompiling packages... 38960.1 ms ✓ Enzyme → EnzymeSpecialFunctionsExt 1 dependency successfully precompiled in 39 seconds. 55 already precompiled. Test Summary: | Pass Total Time GaussianModel | 3 3 7.3s Test Summary: | Pass Total Time BiasedCoin | 3 3 3.1s Test Summary: | Pass Total Time HabituatingBiasedCoin | 3 3 1.2s Test Summary: | Pass Total Time MarkovChain | 1 1 5.3s Test Summary: | Pass Total Time HabituatingMarkovChain | 1 1 4.3s gradlogp & hesslogp: Error During Test at /home/pkgeval/.julia/packages/LaplacianExpectationMaximization/as2MD/test/diff.jl:1 Got exception outside of a @test All `CallInfo` is required to implement `add_edges_impl(::Vector{Any}, ::CallInfo)` Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] add_edges_impl(::Vector{Any}, ::Compiler.CallInfo) @ Compiler ./../usr/share/julia/Compiler/src/types.jl:518 [3] add_edges!(edges::Vector{Any}, info::Compiler.CallInfo) @ Compiler ./../usr/share/julia/Compiler/src/types.jl:511 [4] compute_edges!(sv::Compiler.InferenceState) @ Compiler ./../usr/share/julia/Compiler/src/typeinfer.jl:652 [5] finishinfer!(me::Compiler.InferenceState, interp::Enzyme.Compiler.Interpreter.EnzymeInterpreter{Nothing}, cycleid::Int64) @ Compiler ./../usr/share/julia/Compiler/src/typeinfer.jl:499 [6] finish_nocycle(::Enzyme.Compiler.Interpreter.EnzymeInterpreter{Nothing}, frame::Compiler.InferenceState, time_before::UInt64) @ Compiler ./../usr/share/julia/Compiler/src/typeinfer.jl:199 [7] typeinf(interp::Enzyme.Compiler.Interpreter.EnzymeInterpreter{Nothing}, frame::Compiler.InferenceState) @ Compiler ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:4502 [8] typeinf_ext(interp::Enzyme.Compiler.Interpreter.EnzymeInterpreter{Nothing}, mi::Core.MethodInstance, source_mode::UInt8) @ Compiler ./../usr/share/julia/Compiler/src/typeinfer.jl:1259 [9] typeinf_type @ ./../usr/share/julia/Compiler/src/typeinfer.jl:1281 [inlined] [10] return_type(interp::Enzyme.Compiler.Interpreter.EnzymeInterpreter{Nothing}, mi::Core.MethodInstance) @ Enzyme.Compiler ~/.julia/packages/Enzyme/lmg7D/src/typeutils/inference.jl:12 [11] primal_return_type_world(mode::Mode, world::UInt64, mi::Core.MethodInstance) @ Enzyme.Compiler ~/.julia/packages/Enzyme/lmg7D/src/typeutils/inference.jl:82 [12] primal_return_type_generator(world::UInt64, source::Any, self::Any, mode::Type, ft::Type, tt::Type) @ Enzyme.Compiler ~/.julia/packages/Enzyme/lmg7D/src/typeutils/inference.jl:150 [13] autodiff @ ~/.julia/packages/Enzyme/lmg7D/src/Enzyme.jl:552 [inlined] [14] autodiff @ ~/.julia/packages/Enzyme/lmg7D/src/Enzyme.jl:530 [inlined] [15] (::EnzGradLogP{})(dx::ComponentVector{Float64, Vector{Float64}, Tuple{Axis{(w = 1,)}}}, x::ComponentVector{Float64, Vector{Float64}, Tuple{Axis{(w = 1,)}}}) @ EnzymeExt ~/.julia/packages/LaplacianExpectationMaximization/as2MD/ext/EnzymeExt.jl:23 [16] top-level scope @ ~/.julia/packages/LaplacianExpectationMaximization/as2MD/test/diff.jl:3 [17] macro expansion @ /opt/julia/share/julia/stdlib/v1.12/Test/src/Test.jl:1776 [inlined] [18] macro expansion @ ~/.julia/packages/LaplacianExpectationMaximization/as2MD/test/diff.jl:8 [inlined] [19] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:306 [20] top-level scope @ ~/.julia/packages/LaplacianExpectationMaximization/as2MD/test/runtests.jl:11 [21] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:306 [22] top-level scope @ none:6 [23] eval(m::Module, e::Any) @ Core ./boot.jl:489 [24] exec_options(opts::Base.JLOptions) @ Base ./client.jl:287 [25] _start() @ Base ./client.jl:554 Test Summary: | Error Total Time gradlogp & hesslogp | 1 1 1m39.0s RNG of the outermost testset: Xoshiro(0x2ff7213edd1c4864, 0xb4d5c6d00b1f83d9, 0x9fa1fddc018c456e, 0x4c764dc335115e79, 0x83de8b5179b1c464) ERROR: LoadError: Some tests did not pass: 0 passed, 0 failed, 1 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/LaplacianExpectationMaximization/as2MD/test/diff.jl:1 in expression starting at /home/pkgeval/.julia/packages/LaplacianExpectationMaximization/as2MD/test/runtests.jl:11 Testing failed after 635.74s ERROR: LoadError: Package LaplacianExpectationMaximization errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2427 [3] test @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2280 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:483 [5] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:164 [6] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:152 [7] test @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:152 [inlined] [8] #test#81 @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:151 [inlined] [9] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 [10] include(mod::Module, _path::String) @ Base ./Base.jl:305 [11] exec_options(opts::Base.JLOptions) @ Base ./client.jl:321 [12] _start() @ Base ./client.jl:554 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 1370.81s: package tests unexpectedly errored