Package evaluation to test Vecchia on Julia 1.14.0-DEV.2593 (15c2b67521*) started at 2026-07-03T16:39:16.991


################################################################################
# Set-up
#

Installing PkgEval dependencies (TestEnv)...
  Activating project at `~/.julia/environments/v1.14`

Set-up completed after 15.71s


################################################################################
# Installation
#

Installing Vecchia...
   Resolving package versions...
   Installed Reexport ───────── v1.2.2
   Installed StaticArraysCore ─ v1.4.4
   Installed StatsAPI ───────── v1.8.0
   Installed Distances ──────── v0.10.12
   Installed HNSW ───────────── v0.1.6
   Installed Statistics ─────── v1.11.1
   Installed Vecchia ────────── v0.13.2
    Updating `~/.julia/environments/v1.14/Project.toml`
  [8d73829f] + Vecchia v0.13.2
    Updating `~/.julia/environments/v1.14/Manifest.toml`
  [b4f34e82] + Distances v0.10.12
  [540f64fa] + HNSW v0.1.6
  [189a3867] + Reexport v1.2.2
  [1e83bf80] + StaticArraysCore v1.4.4
  [10745b16] + Statistics v1.11.1
  [82ae8749] + StatsAPI v1.8.0
  [8d73829f] + Vecchia v0.13.2
  [56f22d72] + Artifacts v1.11.0
  [8f399da3] + Libdl v1.11.0
  [37e2e46d] + LinearAlgebra v1.14.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v1.13.0
  [9e88b42a] + Serialization v1.11.0
  [2f01184e] + SparseArrays v1.13.0
  [e66e0078] + CompilerSupportLibraries_jll v1.5.5+2
  [4536629a] + OpenBLAS_jll v0.3.33+0
  [bea87d4a] + SuiteSparse_jll v7.10.1+0
  [8e850b90] + libblastrampoline_jll v5.15.0+0

Installation completed after 4.71s


################################################################################
# Precompilation
#

Precompiling PkgEval dependencies...
Precompiling project...
   8.9 s  ✓ TestEnv
  1 dependency successfully precompiled in 9 seconds. 27 already precompiled.

Precompiling package dependencies...
Precompiling project...
   4.4 s  ✓ MacroTools
   0.6 s  ✓ Reexport
   1.4 s  ✓ Statistics
   2.7 s  ✓ IrrationalConstants
   2.2 s  ✓ Bessels
   1.3 s  ✓ StaticArraysCore
   0.8 s  ✓ StatsAPI
   1.9 s  ✓ StableRNGs
   1.5 s  ✓ DocStringExtensions
   1.8 s  ✓ NaNMath
  31.2 s  ✓ Preferences
   1.9 s  ✓ CommonSubexpressions
  41.2 s  ✓ Statistics → SparseArraysExt
   1.6 s  ✓ BesselK
   1.1 s  ✓ DiffResults
   2.9 s  ✓ Distances
   1.9 s  ✓ LogExpFunctions
  31.0 s  ✓ JLLWrappers
  31.1 s  ✓ PrecompileTools
   1.8 s  ✓ HNSW
  41.8 s  ✓ Distances → DistancesSparseArraysExt
  31.5 s  ✓ OpenSpecFun_jll
 358.1 s  ✓ StaticArrays
  78.3 s  ✓ Vecchia
 106.5 s  ✓ SpecialFunctions
  35.2 s  ✓ StaticArrays → StaticArraysStatisticsExt
   1.8 s  ✓ DiffRules
ERROR: LoadError: MethodError: no method matching chunk_mode_gradient_expr(::Base.JuliaSyntax.SyntaxTree{Dict{Symbol, Dict{Int64, Any}}})
The function `chunk_mode_gradient_expr` exists, but no method is defined for this combination of argument types.

Closest candidates are:
  chunk_mode_gradient_expr(!Matched::Expr)
   @ ForwardDiff ~/.julia/packages/ForwardDiff/4J2wz/src/gradient.jl:114

Stacktrace:
  [1] top-level scope
    @ ~/.julia/packages/ForwardDiff/4J2wz/src/gradient.jl:161
  [2] include(mapexpr::Function, mod::Module, _path::String)
    @ Base Base.jl:326
  [3] top-level scope
    @ ~/.julia/packages/ForwardDiff/4J2wz/src/ForwardDiff.jl:21
  [4] include(mod::Module, _path::String)
    @ Base Base.jl:325
  [5] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base loading.jl:3303
  [6] top-level scope
    @ stdin:5
  [7] eval(m::Module, e::Any)
    @ Core boot.jl:522
  [8] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base loading.jl:3132
  [9] include_string(m::Module, txt::String, fname::String)
    @ Base loading.jl:3142 [inlined]
 [10] exec_options(opts::Base.JLOptions)
    @ Base client.jl:353
 [11] _start()
    @ Base client.jl:596
in expression starting at /home/pkgeval/.julia/packages/ForwardDiff/4J2wz/src/gradient.jl:160
in expression starting at /home/pkgeval/.julia/packages/ForwardDiff/4J2wz/src/ForwardDiff.jl:1
in expression starting at stdin:5
              ✗ ForwardDiff
ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("f6369f11-7733-5829-9624-2563aa707210"), "ForwardDiff") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0)
Stacktrace:
  [1] error(s::String)
    @ Base error.jl:56
  [2] __require_prelocked(pkg::Base.PkgId, env::String)
    @ Base loading.jl:2837
  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base loading.jl:2685
  [4] macro expansion
    @ loading.jl:2599 [inlined]
  [5] macro expansion
    @ lock.jl:376 [inlined]
  [6] __require(into::Module, mod::Symbol)
    @ Base loading.jl:2563
  [7] require(into::Module, mod::Symbol)
    @ Base loading.jl:2539 [inlined]
  [8] eval_import_path(at::Module, from::Nothing, path::Expr, keyword::String)
    @ Base module.jl:36 [inlined]
  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)
    @ Base module.jl:60
 [10] _eval_using(to::Module, path::Expr, flags::UInt8)
    @ Base module.jl:137 [inlined]
 [11] eval_using(to::Module, path::Expr)
    @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/runtime.jl:130
 [12] top-level scope
    @ ~/.julia/packages/ForwardDiff/4J2wz/ext/ForwardDiffStaticArraysExt.jl:3
 [13] include(mod::Module, _path::String)
    @ Base Base.jl:325
 [14] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base loading.jl:3303
 [15] top-level scope
    @ stdin:5
 [16] eval(m::Module, e::Any)
    @ Core boot.jl:522
 [17] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base loading.jl:3132
 [18] include_string(m::Module, txt::String, fname::String)
    @ Base loading.jl:3142 [inlined]
 [19] exec_options(opts::Base.JLOptions)
    @ Base client.jl:353
 [20] _start()
    @ Base client.jl:596
in expression starting at /home/pkgeval/.julia/packages/ForwardDiff/4J2wz/ext/ForwardDiffStaticArraysExt.jl:1
in expression starting at stdin:5
              ✗ ForwardDiff → ForwardDiffStaticArraysExt
ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("f6369f11-7733-5829-9624-2563aa707210"), "ForwardDiff") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0)
Stacktrace:
  [1] error(s::String)
    @ Base error.jl:56
  [2] __require_prelocked(pkg::Base.PkgId, env::String)
    @ Base loading.jl:2837
  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base loading.jl:2685
  [4] macro expansion
    @ loading.jl:2599 [inlined]
  [5] macro expansion
    @ lock.jl:376 [inlined]
  [6] __require(into::Module, mod::Symbol)
    @ Base loading.jl:2563
  [7] require(into::Module, mod::Symbol)
    @ Base loading.jl:2539 [inlined]
  [8] eval_import_path(at::Module, from::Nothing, path::Expr, keyword::String)
    @ Base module.jl:36 [inlined]
  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)
    @ Base module.jl:60
 [10] _eval_using(to::Module, path::Expr, flags::UInt8)
    @ Base module.jl:137 [inlined]
 [11] eval_using(to::Module, path::Expr)
    @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/runtime.jl:130
 [12] top-level scope
    @ ~/.julia/packages/BesselK/R9Xvy/ext/BesselKForwardDiffExt.jl:4
 [13] include(mod::Module, _path::String)
    @ Base Base.jl:325
 [14] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base loading.jl:3303
 [15] top-level scope
    @ stdin:5
 [16] eval(m::Module, e::Any)
    @ Core boot.jl:522
 [17] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base loading.jl:3132
 [18] include_string(m::Module, txt::String, fname::String)
    @ Base loading.jl:3142 [inlined]
 [19] exec_options(opts::Base.JLOptions)
    @ Base client.jl:353
 [20] _start()
    @ Base client.jl:596
in expression starting at /home/pkgeval/.julia/packages/BesselK/R9Xvy/ext/BesselKForwardDiffExt.jl:2
in expression starting at stdin:5
              ✗ BesselK → BesselKForwardDiffExt
ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("f6369f11-7733-5829-9624-2563aa707210"), "ForwardDiff") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0)
Stacktrace:
  [1] error(s::String)
    @ Base error.jl:56
  [2] __require_prelocked(pkg::Base.PkgId, env::String)
    @ Base loading.jl:2837
  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base loading.jl:2685
  [4] macro expansion
    @ loading.jl:2599 [inlined]
  [5] macro expansion
    @ lock.jl:376 [inlined]
  [6] __require(into::Module, mod::Symbol)
    @ Base loading.jl:2563
  [7] require(into::Module, mod::Symbol)
    @ Base loading.jl:2539 [inlined]
  [8] eval_import_path(at::Module, from::Nothing, path::Expr, keyword::String)
    @ Base module.jl:36 [inlined]
  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)
    @ Base module.jl:60
 [10] _eval_using(to::Module, path::Expr, flags::UInt8)
    @ Base module.jl:137 [inlined]
 [11] eval_using(to::Module, path::Expr)
    @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/runtime.jl:130
 [12] top-level scope
    @ ~/.julia/packages/Vecchia/rlhYr/ext/VecchiaForwardDiffExt.jl:4
 [13] include(mod::Module, _path::String)
    @ Base Base.jl:325
 [14] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base loading.jl:3303
 [15] top-level scope
    @ stdin:5
 [16] eval(m::Module, e::Any)
    @ Core boot.jl:522
 [17] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base loading.jl:3132
 [18] include_string(m::Module, txt::String, fname::String)
    @ Base loading.jl:3142 [inlined]
 [19] exec_options(opts::Base.JLOptions)
    @ Base client.jl:353
 [20] _start()
    @ Base client.jl:596
in expression starting at /home/pkgeval/.julia/packages/Vecchia/rlhYr/ext/VecchiaForwardDiffExt.jl:2
in expression starting at stdin:5
              ✗ Vecchia → VecchiaForwardDiffExt
ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("f6369f11-7733-5829-9624-2563aa707210"), "ForwardDiff") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0)
Stacktrace:
  [1] error(s::String)
    @ Base error.jl:56
  [2] __require_prelocked(pkg::Base.PkgId, env::String)
    @ Base loading.jl:2837
  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base loading.jl:2685
  [4] macro expansion
    @ loading.jl:2599 [inlined]
  [5] macro expansion
    @ lock.jl:376 [inlined]
  [6] __require(into::Module, mod::Symbol)
    @ Base loading.jl:2563
  [7] require(into::Module, mod::Symbol)
    @ Base loading.jl:2539 [inlined]
  [8] eval_import_path(at::Module, from::Nothing, path::Expr, keyword::String)
    @ Base module.jl:36 [inlined]
  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)
    @ Base module.jl:60
 [10] _eval_using(to::Module, path::Expr, flags::UInt8)
    @ Base module.jl:137 [inlined]
 [11] eval_using(to::Module, path::Expr)
    @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/runtime.jl:130
 [12] top-level scope
    @ ~/.julia/packages/GPMaxlik/SgmSa/src/GPMaxlik.jl:3
 [13] include(mod::Module, _path::String)
    @ Base Base.jl:325
 [14] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base loading.jl:3303
 [15] top-level scope
    @ stdin:5
 [16] eval(m::Module, e::Any)
    @ Core boot.jl:522
 [17] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base loading.jl:3132
 [18] include_string(m::Module, txt::String, fname::String)
    @ Base loading.jl:3142 [inlined]
 [19] exec_options(opts::Base.JLOptions)
    @ Base client.jl:353
 [20] _start()
    @ Base client.jl:596
in expression starting at /home/pkgeval/.julia/packages/GPMaxlik/SgmSa/src/GPMaxlik.jl:1
in expression starting at stdin:5
              ✗ GPMaxlik
  27 dependencies successfully precompiled in 995 seconds. 15 already precompiled.

Precompilation completed after 1047.58s


################################################################################
# Testing
#

     Testing Vecchia
      Status `/tmp/jl_tdyWce/Project.toml`
  [432ab697] BesselK v0.5.7
  [b4f34e82] Distances v0.10.12
  [f6369f11] ForwardDiff v1.4.1
  [988d40dc] GPMaxlik v0.14.3
  [540f64fa] HNSW v0.1.6
  [860ef19b] StableRNGs v1.0.4
  [90137ffa] StaticArrays v1.9.18
  [1e83bf80] StaticArraysCore v1.4.4
  [8d73829f] Vecchia v0.13.2
  [37e2e46d] LinearAlgebra v1.14.0
  [9a3f8284] Random v1.11.0
  [2f01184e] SparseArrays v1.13.0
  [8dfed614] Test v1.11.0
      Status `/tmp/jl_tdyWce/Manifest.toml`
  [432ab697] BesselK v0.5.7
  [0e736298] Bessels v0.2.8
  [bbf7d656] CommonSubexpressions v0.3.1
  [163ba53b] DiffResults v1.1.0
  [b552c78f] DiffRules v1.16.0
  [b4f34e82] Distances v0.10.12
  [ffbed154] DocStringExtensions v0.9.5
  [f6369f11] ForwardDiff v1.4.1
  [988d40dc] GPMaxlik v0.14.3
  [540f64fa] HNSW v0.1.6
  [92d709cd] IrrationalConstants v0.2.6
  [692b3bcd] JLLWrappers v1.8.0
  [2ab3a3ac] LogExpFunctions v1.0.1
  [1914dd2f] MacroTools v0.5.16
  [77ba4419] NaNMath v1.1.4
  [aea7be01] PrecompileTools v1.3.4
  [21216c6a] Preferences v1.5.2
  [189a3867] Reexport v1.2.2
  [276daf66] SpecialFunctions v2.8.0
  [860ef19b] StableRNGs v1.0.4
  [90137ffa] StaticArrays v1.9.18
  [1e83bf80] StaticArraysCore v1.4.4
  [10745b16] Statistics v1.11.1
  [82ae8749] StatsAPI v1.8.0
  [8d73829f] Vecchia v0.13.2
  [efe28fd5] OpenSpecFun_jll v0.5.6+0
  [56f22d72] Artifacts v1.11.0
  [2a0f44e3] Base64 v1.11.0
  [ade2ca70] Dates v1.11.0
  [b77e0a4c] InteractiveUtils v1.11.0
  [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0
  [8f399da3] Libdl v1.11.0
  [37e2e46d] LinearAlgebra v1.14.0
  [56ddb016] Logging v1.11.0
  [d6f4376e] Markdown v1.11.0
  [de0858da] Printf v1.11.0
  [9a3f8284] Random v1.11.0
  [ea8e919c] SHA v1.13.0
  [9e88b42a] Serialization v1.11.0
  [2f01184e] SparseArrays v1.13.0
  [f489334b] StyledStrings v1.13.0
  [fa267f1f] TOML v1.0.3
  [8dfed614] Test v1.11.0
  [4ec0a83e] Unicode v1.11.0
  [e66e0078] CompilerSupportLibraries_jll v1.5.5+2
  [4536629a] OpenBLAS_jll v0.3.33+0
  [05823500] OpenLibm_jll v0.8.7+0
  [bea87d4a] SuiteSparse_jll v7.10.1+0
  [8e850b90] libblastrampoline_jll v5.15.0+0
     Testing Running tests...
ERROR: LoadError: MethodError: no method matching chunk_mode_gradient_expr(::Base.JuliaSyntax.SyntaxTree{Dict{Symbol, Dict{Int64, Any}}})
The function `chunk_mode_gradient_expr` exists, but no method is defined for this combination of argument types.

Closest candidates are:
  chunk_mode_gradient_expr(!Matched::Expr)
   @ ForwardDiff ~/.julia/packages/ForwardDiff/4J2wz/src/gradient.jl:114

Stacktrace:
  [1] top-level scope
    @ ~/.julia/packages/ForwardDiff/4J2wz/src/gradient.jl:161
  [2] include(mapexpr::Function, mod::Module, _path::String)
    @ Base Base.jl:326
  [3] top-level scope
    @ ~/.julia/packages/ForwardDiff/4J2wz/src/ForwardDiff.jl:21
  [4] include(mod::Module, _path::String)
    @ Base Base.jl:325
  [5] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base loading.jl:3303
  [6] top-level scope
    @ stdin:5
  [7] eval(m::Module, e::Any)
    @ Core boot.jl:522
  [8] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base loading.jl:3132
  [9] include_string(m::Module, txt::String, fname::String)
    @ Base loading.jl:3142 [inlined]
 [10] exec_options(opts::Base.JLOptions)
    @ Base client.jl:353
 [11] _start()
    @ Base client.jl:596
in expression starting at /home/pkgeval/.julia/packages/ForwardDiff/4J2wz/src/gradient.jl:160
in expression starting at /home/pkgeval/.julia/packages/ForwardDiff/4J2wz/src/ForwardDiff.jl:1
in expression starting at stdin:5
  1 dependency had output during precompilation:
┌ ForwardDiff
│  [Output was shown above]
└  
ERROR: LoadError: The following 1 package failed to precompile:

ForwardDiff 
Failed to precompile ForwardDiff [f6369f11-7733-5829-9624-2563aa707210] to "/home/pkgeval/.julia/compiled/v1.14/ForwardDiff/jl_jQWsFm" (ProcessExited(1)).

in expression starting at /home/pkgeval/.julia/packages/Vecchia/rlhYr/test/runtests.jl:5

Testing failed after 404.53s

ERROR: LoadError: Package Vecchia errored during testing
Stacktrace:
  [1] pkgerror(msg::String)
    @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68
  [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool)
    @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3247
  [3] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:587
  [4] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172
  [5] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160
  [6] test(pkg::String; kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [inlined]
  [7] top-level scope
    @ /PkgEval.jl/scripts/evaluate.jl:223
  [8] include(mod::Module, _path::String)
    @ Base Base.jl:325
  [9] exec_options(opts::Base.JLOptions)
    @ Base client.jl:355
 [10] _start()
    @ Base client.jl:596
in expression starting at /PkgEval.jl/scripts/evaluate.jl:214

PkgEval failed after 1499.27s: package fails to precompile