Package evaluation to test TopologyPreprocessing on Julia 1.14.0-DEV.2593 (15c2b67521*) started at 2026-07-03T20:23:01.309


################################################################################
# Set-up
#

Installing PkgEval dependencies (TestEnv)...
  Activating project at `~/.julia/environments/v1.14`

Set-up completed after 14.89s


################################################################################
# Installation
#

Installing TopologyPreprocessing...
   Resolving package versions...
   Installed LogExpFunctions ─────── v1.0.1
   Installed DataStructures ──────── v0.19.5
   Installed SortingAlgorithms ───── v1.2.3
   Installed Missings ────────────── v1.2.0
   Installed DataAPI ─────────────── v1.16.0
   Installed StatsAPI ────────────── v1.8.0
   Installed Statistics ──────────── v1.11.1
   Installed TopologyPreprocessing ─ v0.1.7
   Installed StatsBase ───────────── v0.34.12
   Installed OrderedCollections ──── v1.8.2
   Installed AliasTables ─────────── v1.1.3
   Installed IrrationalConstants ─── v0.2.6
   Installed PtrArrays ───────────── v1.4.0
   Installed DocStringExtensions ─── v0.9.5
   Installed Distances ───────────── v0.10.12
    Updating `~/.julia/environments/v1.14/Project.toml`
  [f84dc87b] + TopologyPreprocessing v0.1.7
    Updating `~/.julia/environments/v1.14/Manifest.toml`
  [66dad0bd] + AliasTables v1.1.3
  [9a962f9c] + DataAPI v1.16.0
  [864edb3b] + DataStructures v0.19.5
  [b4f34e82] + Distances v0.10.12
  [ffbed154] + DocStringExtensions v0.9.5
  [92d709cd] + IrrationalConstants v0.2.6
  [2ab3a3ac] + LogExpFunctions v1.0.1
  [e1d29d7a] + Missings v1.2.0
⌅ [bac558e1] + OrderedCollections v1.8.2
  [43287f4e] + PtrArrays v1.4.0
  [a2af1166] + SortingAlgorithms v1.2.3
  [10745b16] + Statistics v1.11.1
  [82ae8749] + StatsAPI v1.8.0
  [2913bbd2] + StatsBase v0.34.12
  [f84dc87b] + TopologyPreprocessing v0.1.7
  [56f22d72] + Artifacts v1.11.0
  [8f399da3] + Libdl v1.11.0
  [37e2e46d] + LinearAlgebra v1.14.0
  [de0858da] + Printf v1.11.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v1.13.0
  [9e88b42a] + Serialization v1.11.0
  [2f01184e] + SparseArrays v1.13.0
  [4ec0a83e] + Unicode v1.11.0
  [e66e0078] + CompilerSupportLibraries_jll v1.5.5+2
  [4536629a] + OpenBLAS_jll v0.3.33+0
  [bea87d4a] + SuiteSparse_jll v7.10.1+0
  [8e850b90] + libblastrampoline_jll v5.15.0+0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`

Installation completed after 4.93s


################################################################################
# Precompilation
#

Precompiling PkgEval dependencies...
Precompiling project...
   8.5 s  ✓ TestEnv
  1 dependency successfully precompiled in 9 seconds. 27 already precompiled.

Precompiling package dependencies...
Precompiling project...
   0.8 s  ✓ StatsAPI
   1.5 s  ✓ DocStringExtensions
   1.4 s  ✓ Statistics
   1.1 s  ✓ DataAPI
  36.1 s  ✓ PtrArrays
 145.8 s  ✓ OrderedCollections
   2.6 s  ✓ IrrationalConstants
   0.5 s  ✓ SafeTestsets
  40.6 s  ✓ Statistics → SparseArraysExt
   2.8 s  ✓ Distances
  54.1 s  ✓ Missings
  36.4 s  ✓ AliasTables
 165.7 s  ✓ DataStructures
   1.8 s  ✓ LogExpFunctions
  42.6 s  ✓ Distances → DistancesSparseArraysExt
  39.2 s  ✓ SortingAlgorithms
ERROR: LoadError: Creating a new global in closed module `IrrationalConstants` (`#kw_body#_#48`) breaks incremental compilation because the side effects will not be permanent.
Stacktrace:
  [1] top-level scope
    @ ~/.julia/packages/StatsBase/2Znv8/src/scalarstats.jl:527
  [2] include(mapexpr::Function, mod::Module, _path::String)
    @ Base Base.jl:326
  [3] top-level scope
    @ ~/.julia/packages/StatsBase/2Znv8/src/StatsBase.jl:251
  [4] include(mod::Module, _path::String)
    @ Base Base.jl:325
  [5] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base loading.jl:3303
  [6] top-level scope
    @ stdin:5
  [7] eval(m::Module, e::Any)
    @ Core boot.jl:522
  [8] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base loading.jl:3132
  [9] include_string(m::Module, txt::String, fname::String)
    @ Base loading.jl:3142 [inlined]
 [10] exec_options(opts::Base.JLOptions)
    @ Base client.jl:353
 [11] _start()
    @ Base client.jl:596
in expression starting at /home/pkgeval/.julia/packages/StatsBase/2Znv8/src/scalarstats.jl:527
in expression starting at /home/pkgeval/.julia/packages/StatsBase/2Znv8/src/StatsBase.jl:1
in expression starting at stdin:5
              ✗ StatsBase
ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("2913bbd2-ae8a-5f71-8c99-4fb6c76f3a91"), "StatsBase") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0)
Stacktrace:
  [1] error(s::String)
    @ Base error.jl:56
  [2] __require_prelocked(pkg::Base.PkgId, env::String)
    @ Base loading.jl:2837
  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base loading.jl:2685
  [4] macro expansion
    @ loading.jl:2599 [inlined]
  [5] macro expansion
    @ lock.jl:376 [inlined]
  [6] __require(into::Module, mod::Symbol)
    @ Base loading.jl:2563
  [7] require(into::Module, mod::Symbol)
    @ Base loading.jl:2539 [inlined]
  [8] eval_import_path(at::Module, from::Nothing, path::Expr, keyword::String)
    @ Base module.jl:36 [inlined]
  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)
    @ Base module.jl:60
 [10] _eval_using(to::Module, path::Expr, flags::UInt8)
    @ Base module.jl:137 [inlined]
 [11] eval_using(to::Module, path::Expr)
    @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/runtime.jl:130
 [12] top-level scope
    @ ~/.julia/packages/TopologyPreprocessing/2BAaz/src/MatrixProcessing.jl:2
 [13] include(mapexpr::Function, mod::Module, _path::String)
    @ Base Base.jl:326
 [14] top-level scope
    @ ~/.julia/packages/TopologyPreprocessing/2BAaz/src/TopologyPreprocessing.jl:48
 [15] include(mod::Module, _path::String)
    @ Base Base.jl:325
 [16] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base loading.jl:3303
 [17] top-level scope
    @ stdin:5
 [18] eval(m::Module, e::Any)
    @ Core boot.jl:522
 [19] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base loading.jl:3132
 [20] include_string(m::Module, txt::String, fname::String)
    @ Base loading.jl:3142 [inlined]
 [21] exec_options(opts::Base.JLOptions)
    @ Base client.jl:353
 [22] _start()
    @ Base client.jl:596
in expression starting at /home/pkgeval/.julia/packages/TopologyPreprocessing/2BAaz/src/MatrixProcessing.jl:2
in expression starting at /home/pkgeval/.julia/packages/TopologyPreprocessing/2BAaz/src/TopologyPreprocessing.jl:1
in expression starting at stdin:5
              ✗ TopologyPreprocessing
  16 dependencies successfully precompiled in 709 seconds. 12 already precompiled.

Precompilation completed after 756.42s


################################################################################
# Testing
#

     Testing TopologyPreprocessing
      Status `/tmp/jl_cTMx2P/Project.toml`
  [b4f34e82] Distances v0.10.12
  [1bc83da4] SafeTestsets v0.1.0
  [2913bbd2] StatsBase v0.34.12
  [f84dc87b] TopologyPreprocessing v0.1.7
  [37e2e46d] LinearAlgebra v1.14.0
  [9a3f8284] Random v1.11.0
  [8dfed614] Test v1.11.0
      Status `/tmp/jl_cTMx2P/Manifest.toml`
  [66dad0bd] AliasTables v1.1.3
  [9a962f9c] DataAPI v1.16.0
  [864edb3b] DataStructures v0.19.5
  [b4f34e82] Distances v0.10.12
  [ffbed154] DocStringExtensions v0.9.5
  [92d709cd] IrrationalConstants v0.2.6
  [2ab3a3ac] LogExpFunctions v1.0.1
  [e1d29d7a] Missings v1.2.0
⌅ [bac558e1] OrderedCollections v1.8.2
  [43287f4e] PtrArrays v1.4.0
  [1bc83da4] SafeTestsets v0.1.0
  [a2af1166] SortingAlgorithms v1.2.3
  [10745b16] Statistics v1.11.1
  [82ae8749] StatsAPI v1.8.0
  [2913bbd2] StatsBase v0.34.12
  [f84dc87b] TopologyPreprocessing v0.1.7
  [56f22d72] Artifacts v1.11.0
  [2a0f44e3] Base64 v1.11.0
  [b77e0a4c] InteractiveUtils v1.11.0
  [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0
  [8f399da3] Libdl v1.11.0
  [37e2e46d] LinearAlgebra v1.14.0
  [56ddb016] Logging v1.11.0
  [d6f4376e] Markdown v1.11.0
  [de0858da] Printf v1.11.0
  [9a3f8284] Random v1.11.0
  [ea8e919c] SHA v1.13.0
  [9e88b42a] Serialization v1.11.0
  [2f01184e] SparseArrays v1.13.0
  [f489334b] StyledStrings v1.13.0
  [8dfed614] Test v1.11.0
  [4ec0a83e] Unicode v1.11.0
  [e66e0078] CompilerSupportLibraries_jll v1.5.5+2
  [4536629a] OpenBLAS_jll v0.3.33+0
  [bea87d4a] SuiteSparse_jll v7.10.1+0
  [8e850b90] libblastrampoline_jll v5.15.0+0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading.
     Testing Running tests...
ERROR: LoadError: ArgumentError: Cannot load (`using/import`) module Test into module SafeTestsets.var"##MatrixProcessing tests#1048" in package SafeTestsets
because package SafeTestsets does not have Test in its dependencies:
- Note that the following manifests in the load path were resolved with a potentially
  different DEV version of the current version, which may be the cause of the error.
  Try to re-resolve them in the current version, or consider deleting them if that fails:
    /tmp/jl_cTMx2P/Manifest.toml
- You may have a partially installed environment. Try `Pkg.instantiate()`
  to ensure all packages in the environment are installed.
- Or, if you have SafeTestsets checked out for development and have
  added Test as a dependency but haven't updated your primary
  environment's manifest file, try `Pkg.resolve()`.
- Otherwise you may need to report an issue with SafeTestsets
Stacktrace:
  [1] macro expansion
    @ loading.jl:2583 [inlined]
  [2] macro expansion
    @ lock.jl:376 [inlined]
  [3] __require(into::Module, mod::Symbol)
    @ Base loading.jl:2563
  [4] require(into::Module, mod::Symbol)
    @ Base loading.jl:2539 [inlined]
  [5] eval_import_path(at::Module, from::Nothing, path::Expr, keyword::String)
    @ Base module.jl:36 [inlined]
  [6] eval_import_path_all(at::Module, path::Expr, keyword::String)
    @ Base module.jl:60
  [7] _eval_using(to::Module, path::Expr, flags::UInt8)
    @ Base module.jl:137 [inlined]
  [8] eval_using(to::Module, path::Expr)
    @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/runtime.jl:130
  [9] top-level scope
    @ ~/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:29
 [10] eval(m::Module, e::Any)
    @ Core boot.jl:522
 [11] _eval(mod::Module, iter::Base.JuliaLowering.LoweringIterator{Dict{Symbol, Dict{Int64, Any}}}; soft_scope::Nothing)
    @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/eval.jl:745
 [12] eval(mod::Module, ex::Base.JuliaSyntax.SyntaxTree{Dict{Symbol, Dict{Int64, Any}}}; macro_world::UInt64, soft_scope::Nothing, opts::@Kwargs{expr_compat_mode::Bool})
    @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/eval.jl:718 [inlined]
 [13] top-level scope
    @ ~/.julia/packages/TopologyPreprocessing/2BAaz/test/runtests.jl:5
 [14] include(mapexpr::Function, mod::Module, _path::String)
    @ Base Base.jl:326
 [15] top-level scope
    @ none:6
 [16] eval(m::Module, e::Any)
    @ Core boot.jl:522
 [17] exec_options(opts::Base.JLOptions)
    @ Base client.jl:321
 [18] _start()
    @ Base client.jl:596
in expression starting at /home/pkgeval/.julia/packages/TopologyPreprocessing/2BAaz/test/runtests.jl:5

Testing failed after 16.19s

ERROR: LoadError: Package TopologyPreprocessing errored during testing
Stacktrace:
  [1] pkgerror(msg::String)
    @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68
  [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool)
    @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3247
  [3] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:587
  [4] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172
  [5] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160
  [6] test(pkg::String; kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [inlined]
  [7] top-level scope
    @ /PkgEval.jl/scripts/evaluate.jl:223
  [8] include(mod::Module, _path::String)
    @ Base Base.jl:325
  [9] exec_options(opts::Base.JLOptions)
    @ Base client.jl:355
 [10] _start()
    @ Base client.jl:596
in expression starting at /PkgEval.jl/scripts/evaluate.jl:214

PkgEval failed after 818.07s: package tests unexpectedly errored