Package evaluation to load KernelMethods on Julia 1.14.0-DEV.2593 (15c2b67521*) started at 2026-07-04T08:25:27.617 ################################################################################ # Set-up # Set-up completed after 0.15s ################################################################################ # Installation # Installing KernelMethods... Resolving package versions... Installed OrderedCollections ── v1.8.2 Installed DelimitedFiles ────── v1.9.1 Installed DataAPI ───────────── v1.16.0 Installed Compat ────────────── v4.18.1 Installed Statistics ────────── v1.11.1 Installed KernelMethods ─────── v0.1.3 Installed StatsBase ─────────── v0.33.21 Installed DataStructures ────── v0.18.22 Installed PrecompileTools ───── v1.3.4 Installed StatsAPI ──────────── v1.8.0 Installed Parsers ───────────── v2.8.6 Installed SortingAlgorithms ─── v1.2.3 Installed LogExpFunctions ───── v0.3.29 Installed IrrationalConstants ─ v0.2.6 Installed Missings ──────────── v1.2.0 Installed JSON ──────────────── v0.21.4 Installed Preferences ───────── v1.5.2 Installed DocStringExtensions ─ v0.9.5 Installed SimilaritySearch ──── v0.3.7 Updating `~/.julia/environments/v1.14/Project.toml` [d79e8f30] + KernelMethods v0.1.3 Updating `~/.julia/environments/v1.14/Manifest.toml` [34da2185] + Compat v4.18.1 [9a962f9c] + DataAPI v1.16.0 ⌅ [864edb3b] + DataStructures v0.18.22 [8bb1440f] + DelimitedFiles v1.9.1 [ffbed154] + DocStringExtensions v0.9.5 [92d709cd] + IrrationalConstants v0.2.6 ⌅ [682c06a0] + JSON v0.21.4 [d79e8f30] + KernelMethods v0.1.3 ⌅ [2ab3a3ac] + LogExpFunctions v0.3.29 [e1d29d7a] + Missings v1.2.0 ⌅ [bac558e1] + OrderedCollections v1.8.2 [69de0a69] + Parsers v2.8.6 [aea7be01] + PrecompileTools v1.3.4 [21216c6a] + Preferences v1.5.2 ⌅ [053f045d] + SimilaritySearch v0.3.7 [a2af1166] + SortingAlgorithms v1.2.3 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 ⌅ [2913bbd2] + StatsBase v0.33.21 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.14.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.13.0 [9e88b42a] + Serialization v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.13.0 [fa267f1f] + TOML v1.0.3 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.5.5+2 [4536629a] + OpenBLAS_jll v0.3.33+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [8e850b90] + libblastrampoline_jll v5.15.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 9.46s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Project No packages added to or removed from `~/.julia/environments/pkgeval/Project.toml` Manifest No packages added to or removed from `~/.julia/environments/pkgeval/Manifest.toml` Precompiling package dependencies... Precompiling project... 0.8 s ✓ StatsAPI 1.5 s ✓ DocStringExtensions 154.9 s ✓ OrderedCollections 1.1 s ✓ DataAPI 1.4 s ✓ Statistics 2.6 s ✓ IrrationalConstants 1.5 s ✓ DelimitedFiles 31.5 s ✓ Preferences 2.2 s ✓ Compat 57.0 s ✓ Missings 42.6 s ✓ Statistics → SparseArraysExt 2.0 s ✓ LogExpFunctions 31.8 s ✓ PrecompileTools 0.9 s ✓ Compat → CompatLinearAlgebraExt 69.3 s ✓ Parsers 284.7 s ✓ DataStructures 38.3 s ✓ JSON 41.3 s ✓ SortingAlgorithms 61.5 s ✓ SimilaritySearch ERROR: LoadError: Creating a new global in closed module `Base` (`#kw_body#_#0`) breaks incremental compilation because the side effects will not be permanent. Stacktrace:  [1] top-level scope  @ ~/.julia/packages/StatsBase/XgjIN/src/scalarstats.jl:522  [2] include(mapexpr::Function, mod::Module, _path::String)  @ Base Base.jl:326  [3] top-level scope  @ ~/.julia/packages/StatsBase/XgjIN/src/StatsBase.jl:250  [4] include(mod::Module, _path::String)  @ Base Base.jl:325  [5] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base loading.jl:3303  [6] top-level scope  @ stdin:5  [7] eval(m::Module, e::Any)  @ Core boot.jl:522  [8] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base loading.jl:3132  [9] include_string(m::Module, txt::String, fname::String)  @ Base loading.jl:3142 [inlined]  [10] exec_options(opts::Base.JLOptions)  @ Base client.jl:353  [11] _start()  @ Base client.jl:596 in expression starting at /home/pkgeval/.julia/packages/StatsBase/XgjIN/src/scalarstats.jl:522 in expression starting at /home/pkgeval/.julia/packages/StatsBase/XgjIN/src/StatsBase.jl:1 in expression starting at stdin:5 ✗ StatsBase ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("2913bbd2-ae8a-5f71-8c99-4fb6c76f3a91"), "StatsBase") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0) Stacktrace:  [1] error(s::String)  @ Base error.jl:56  [2] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base loading.jl:2837  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base loading.jl:2685  [4] macro expansion  @ loading.jl:2599 [inlined]  [5] macro expansion  @ lock.jl:376 [inlined]  [6] __require(into::Module, mod::Symbol)  @ Base loading.jl:2563  [7] require(into::Module, mod::Symbol)  @ Base loading.jl:2539 [inlined]  [8] eval_import_path(at::Module, from::Nothing, path::Expr, keyword::String)  @ Base module.jl:36 [inlined]  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base module.jl:60  [10] _eval_using(to::Module, path::Expr, flags::UInt8)  @ Base module.jl:137 [inlined]  [11] eval_using(to::Module, path::Expr)  @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/runtime.jl:130  [12] top-level scope  @ ~/.julia/packages/KernelMethods/Eepvn/src/scores.jl:16  [13] include(mapexpr::Function, mod::Module, _path::String)  @ Base Base.jl:326  [14] top-level scope  @ ~/.julia/packages/KernelMethods/Eepvn/src/KernelMethods.jl:17  [15] include(mod::Module, _path::String)  @ Base Base.jl:325  [16] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base loading.jl:3303  [17] top-level scope  @ stdin:5  [18] eval(m::Module, e::Any)  @ Core boot.jl:522  [19] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base loading.jl:3132  [20] include_string(m::Module, txt::String, fname::String)  @ Base loading.jl:3142 [inlined]  [21] exec_options(opts::Base.JLOptions)  @ Base client.jl:353  [22] _start()  @ Base client.jl:596 in expression starting at /home/pkgeval/.julia/packages/KernelMethods/Eepvn/src/scores.jl:15 in expression starting at /home/pkgeval/.julia/packages/KernelMethods/Eepvn/src/KernelMethods.jl:15 in expression starting at stdin:5 ✗ KernelMethods 19 dependencies successfully precompiled in 968 seconds. 16 already precompiled. Precompilation completed after 995.14s ################################################################################ # Loading # Loading KernelMethods... ERROR: LoadError: Creating a new global in closed module `Base` (`#kw_body#_#0`) breaks incremental compilation because the side effects will not be permanent. Stacktrace:  [1] top-level scope  @ ~/.julia/packages/StatsBase/XgjIN/src/scalarstats.jl:522  [2] include(mapexpr::Function, mod::Module, _path::String)  @ Base Base.jl:326  [3] top-level scope  @ ~/.julia/packages/StatsBase/XgjIN/src/StatsBase.jl:250  [4] include(mod::Module, _path::String)  @ Base Base.jl:325  [5] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base loading.jl:3303  [6] top-level scope  @ stdin:5  [7] eval(m::Module, e::Any)  @ Core boot.jl:522  [8] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base loading.jl:3132  [9] include_string(m::Module, txt::String, fname::String)  @ Base loading.jl:3142 [inlined]  [10] exec_options(opts::Base.JLOptions)  @ Base client.jl:353  [11] _start()  @ Base client.jl:596 in expression starting at /home/pkgeval/.julia/packages/StatsBase/XgjIN/src/scalarstats.jl:522 in expression starting at /home/pkgeval/.julia/packages/StatsBase/XgjIN/src/StatsBase.jl:1 in expression starting at stdin:5 ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("2913bbd2-ae8a-5f71-8c99-4fb6c76f3a91"), "StatsBase") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0) Stacktrace:  [1] error(s::String)  @ Base error.jl:56  [2] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base loading.jl:2837  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base loading.jl:2685  [4] macro expansion  @ loading.jl:2599 [inlined]  [5] macro expansion  @ lock.jl:376 [inlined]  [6] __require(into::Module, mod::Symbol)  @ Base loading.jl:2563  [7] require(into::Module, mod::Symbol)  @ Base loading.jl:2539 [inlined]  [8] eval_import_path(at::Module, from::Nothing, path::Expr, keyword::String)  @ Base module.jl:36 [inlined]  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base module.jl:60  [10] _eval_using(to::Module, path::Expr, flags::UInt8)  @ Base module.jl:137 [inlined]  [11] eval_using(to::Module, path::Expr)  @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/runtime.jl:130  [12] top-level scope  @ ~/.julia/packages/KernelMethods/Eepvn/src/scores.jl:16  [13] include(mapexpr::Function, mod::Module, _path::String)  @ Base Base.jl:326  [14] top-level scope  @ ~/.julia/packages/KernelMethods/Eepvn/src/KernelMethods.jl:17  [15] include(mod::Module, _path::String)  @ Base Base.jl:325  [16] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base loading.jl:3303  [17] top-level scope  @ stdin:5  [18] eval(m::Module, e::Any)  @ Core boot.jl:522  [19] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base loading.jl:3132  [20] include_string(m::Module, txt::String, fname::String)  @ Base loading.jl:3142 [inlined]  [21] exec_options(opts::Base.JLOptions)  @ Base client.jl:353  [22] _start()  @ Base client.jl:596 in expression starting at /home/pkgeval/.julia/packages/KernelMethods/Eepvn/src/scores.jl:15 in expression starting at /home/pkgeval/.julia/packages/KernelMethods/Eepvn/src/KernelMethods.jl:15 in expression starting at stdin:5 2 dependencies had output during precompilation: ┌ KernelMethods │ [Output was shown above] └ ┌ StatsBase │ ERROR: LoadError: Creating a new global in closed module `Base` (`#kw_body#_#0`) breaks incremental compilation because the side effects will not be permanent. │ Stacktrace: │ [1] top-level scope │ @ ~/.julia/packages/StatsBase/XgjIN/src/scalarstats.jl:522 │ [2] include(mapexpr::Function, mod::Module, _path::String) │ @ Base Base.jl:326 │ [3] top-level scope │ @ ~/.julia/packages/StatsBase/XgjIN/src/StatsBase.jl:250 │ [4] include(mod::Module, _path::String) │ @ Base Base.jl:325 │ [5] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) │ @ Base loading.jl:3303 │ [6] top-level scope │ @ stdin:5 │ [7] eval(m::Module, e::Any) │ @ Core boot.jl:522 │ [8] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) │ @ Base loading.jl:3132 │ [9] include_string(m::Module, txt::String, fname::String) │ @ Base loading.jl:3142 [inlined] │ [10] exec_options(opts::Base.JLOptions) │ @ Base client.jl:353 │ [11] _start() │ @ Base client.jl:596 │ in expression starting at /home/pkgeval/.julia/packages/StatsBase/XgjIN/src/scalarstats.jl:522 │ in expression starting at /home/pkgeval/.julia/packages/StatsBase/XgjIN/src/StatsBase.jl:1 │ in expression starting at stdin:5 └ ERROR: The following 2 packages failed to precompile: KernelMethods Failed to precompile KernelMethods [d79e8f30-5872-11e9-0dab-2d1842b87615] to "/home/pkgeval/.julia/compiled/v1.14/KernelMethods/jl_OYNEGZ" (ProcessExited(1)). StatsBase Failed to precompile StatsBase [2913bbd2-ae8a-5f71-8c99-4fb6c76f3a91] to "/home/pkgeval/.julia/compiled/v1.14/StatsBase/jl_jOz9e7" (ProcessExited(1)). Loading failed after 150.18s ERROR: LoadError: failed process: Process(`/opt/julia/bin/julia -C native -J/opt/julia/lib/julia/sys.so -g1 --check-bounds=yes --inline=yes --check-bounds=yes --pkgimages=existing -e 'using KernelMethods'`, ProcessExited(1)) [1] Stacktrace: [1] pipeline_error(proc::Base.Process) @ Base process.jl:612 [inlined] [2] run(::Cmd; wait::Bool) @ Base process.jl:525 [3] run(::Cmd) @ Base process.jl:522 [4] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:197 [5] include(mod::Module, _path::String) @ Base Base.jl:325 [6] exec_options(opts::Base.JLOptions) @ Base client.jl:355 [7] _start() @ Base client.jl:596 in expression starting at /PkgEval.jl/scripts/evaluate.jl:188 PkgEval failed after 1184.98s: package fails to precompile