Package evaluation to test Glycolysis on Julia 1.14.0-DEV.2593 (15c2b67521*) started at 2026-07-04T02:05:31.734


################################################################################
# Set-up
#

Installing PkgEval dependencies (TestEnv)...
  Activating project at `~/.julia/environments/v1.14`

Set-up completed after 15.1s


################################################################################
# Installation
#

Installing Glycolysis...
   Resolving package versions...
   Installed RuntimeGeneratedFunctions ─ v0.5.21
   Installed ForwardDiff ─────────────── v1.4.1
   Installed LabelledArrays ──────────── v1.20.0
   Installed CompositionsBase ────────── v0.1.2
   Installed MacroTools ──────────────── v0.5.16
   Installed DiffResults ─────────────── v1.1.0
   Installed Adapt ───────────────────── v4.7.0
   Installed Calculus ────────────────── v0.5.2
   Installed ConstructionBase ────────── v1.6.0
   Installed SymbolicIndexingInterface ─ v0.3.49
   Installed ArrayInterface ──────────── v7.27.0
   Installed PreallocationTools ──────── v1.2.1
   Installed RecipesBase ─────────────── v1.3.4
   Installed ExprTools ───────────────── v0.1.10
   Installed Compat ──────────────────── v4.18.1
   Installed CommonSubexpressions ────── v0.3.1
   Installed PrecompileTools ─────────── v1.3.4
   Installed StaticArraysCore ────────── v1.4.4
   Installed StaticArrays ────────────── v1.9.18
   Installed NaNMath ─────────────────── v1.1.4
   Installed ChainRulesCore ──────────── v1.26.1
   Installed LogExpFunctions ─────────── v1.0.1
   Installed GPUArraysCore ───────────── v0.2.0
   Installed IrrationalConstants ─────── v0.2.6
   Installed DiffRules ───────────────── v1.16.0
   Installed OpenSpecFun_jll ─────────── v0.5.6+0
   Installed SpecialFunctions ────────── v2.8.0
   Installed InverseFunctions ────────── v0.1.17
   Installed Accessors ───────────────── v0.1.45
   Installed RecursiveArrayTools ─────── v4.3.2
   Installed Preferences ─────────────── v1.5.2
   Installed JLLWrappers ─────────────── v1.8.0
   Installed Measurements ────────────── v2.14.1
   Installed DocStringExtensions ─────── v0.9.5
   Installed Glycolysis ──────────────── v0.7.6
  Installing 1 artifacts
   Installed artifact OpenSpecFun 105.4 KiB
    Updating `~/.julia/environments/v1.14/Project.toml`
  [1acb6d80] + Glycolysis v0.7.6
    Updating `~/.julia/environments/v1.14/Manifest.toml`
  [7d9f7c33] + Accessors v0.1.45
  [79e6a3ab] + Adapt v4.7.0
  [4fba245c] + ArrayInterface v7.27.0
  [49dc2e85] + Calculus v0.5.2
  [d360d2e6] + ChainRulesCore v1.26.1
  [bbf7d656] + CommonSubexpressions v0.3.1
  [34da2185] + Compat v4.18.1
  [a33af91c] + CompositionsBase v0.1.2
  [187b0558] + ConstructionBase v1.6.0
  [163ba53b] + DiffResults v1.1.0
  [b552c78f] + DiffRules v1.16.0
  [ffbed154] + DocStringExtensions v0.9.5
  [e2ba6199] + ExprTools v0.1.10
  [f6369f11] + ForwardDiff v1.4.1
  [46192b85] + GPUArraysCore v0.2.0
  [1acb6d80] + Glycolysis v0.7.6
  [3587e190] + InverseFunctions v0.1.17
  [92d709cd] + IrrationalConstants v0.2.6
  [692b3bcd] + JLLWrappers v1.8.0
  [2ee39098] + LabelledArrays v1.20.0
  [2ab3a3ac] + LogExpFunctions v1.0.1
  [1914dd2f] + MacroTools v0.5.16
  [eff96d63] + Measurements v2.14.1
  [77ba4419] + NaNMath v1.1.4
  [d236fae5] + PreallocationTools v1.2.1
  [aea7be01] + PrecompileTools v1.3.4
  [21216c6a] + Preferences v1.5.2
  [3cdcf5f2] + RecipesBase v1.3.4
  [731186ca] + RecursiveArrayTools v4.3.2
  [7e49a35a] + RuntimeGeneratedFunctions v0.5.21
  [276daf66] + SpecialFunctions v2.8.0
  [90137ffa] + StaticArrays v1.9.18
  [1e83bf80] + StaticArraysCore v1.4.4
  [2efcf032] + SymbolicIndexingInterface v0.3.49
  [efe28fd5] + OpenSpecFun_jll v0.5.6+0
  [56f22d72] + Artifacts v1.11.0
  [ade2ca70] + Dates v1.11.0
  [8f399da3] + Libdl v1.11.0
  [37e2e46d] + LinearAlgebra v1.14.0
  [de0858da] + Printf v1.11.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v1.13.0
  [9e88b42a] + Serialization v1.11.0
  [fa267f1f] + TOML v1.0.3
  [cf7118a7] + UUIDs v1.11.0
  [4ec0a83e] + Unicode v1.11.0
  [e66e0078] + CompilerSupportLibraries_jll v1.5.5+2
  [4536629a] + OpenBLAS_jll v0.3.33+0
  [05823500] + OpenLibm_jll v0.8.7+0
  [8e850b90] + libblastrampoline_jll v5.15.0+0

Installation completed after 10.66s


################################################################################
# Precompilation
#

Precompiling PkgEval dependencies...
Precompiling project...
   6.2 s  ✓ TestEnv
  1 dependency successfully precompiled in 6 seconds. 27 already precompiled.

Precompiling package dependencies...
Precompiling project...
   4.4 s  ✓ MacroTools
   1.7 s  ✓ Adapt
   1.7 s  ✓ ConstructionBase
   2.6 s  ✓ IrrationalConstants
   1.3 s  ✓ StaticArraysCore
   1.3 s  ✓ InverseFunctions
   2.3 s  ✓ Calculus
   1.3 s  ✓ CompositionsBase
   1.5 s  ✓ DocStringExtensions
   1.0 s  ✓ ExprTools
   1.6 s  ✓ NaNMath
   2.2 s  ✓ Compat
  31.1 s  ✓ Preferences
   2.0 s  ✓ CommonSubexpressions
   2.0 s  ✓ ArrayInterface
   1.8 s  ✓ GPUArraysCore
   0.6 s  ✓ ConstructionBase → ConstructionBaseLinearAlgebraExt
   1.0 s  ✓ DiffResults
  37.5 s  ✓ InverseFunctions → InverseFunctionsTestExt
  30.5 s  ✓ InverseFunctions → InverseFunctionsDatesExt
 343.3 s  ✓ Measurements
   0.6 s  ✓ CompositionsBase → CompositionsBaseInverseFunctionsExt
   1.8 s  ✓ LogExpFunctions
   1.4 s  ✓ RuntimeGeneratedFunctions
   0.9 s  ✓ Compat → CompatLinearAlgebraExt
  31.7 s  ✓ JLLWrappers
  31.1 s  ✓ PrecompileTools
   0.7 s  ✓ ArrayInterface → ArrayInterfaceStaticArraysCoreExt
   0.7 s  ✓ ArrayInterface → ArrayInterfaceGPUArraysCoreExt
  35.6 s  ✓ Accessors
   0.7 s  ✓ LogExpFunctions → LogExpFunctionsInverseFunctionsExt
 296.9 s  ✓ ChainRulesCore
  31.7 s  ✓ OpenSpecFun_jll
  33.5 s  ✓ RecipesBase
 357.6 s  ✓ StaticArrays
  32.7 s  ✓ PreallocationTools
  31.8 s  ✓ Accessors → LinearAlgebraExt
  66.2 s  ✓ Accessors → TestExt
  33.4 s  ✓ ArrayInterface → ArrayInterfaceChainRulesCoreExt
  36.0 s  ✓ LogExpFunctions → LogExpFunctionsChainRulesCoreExt
 107.3 s  ✓ SpecialFunctions
  65.5 s  ✓ Measurements → MeasurementsRecipesBaseExt
  71.4 s  ✓ StaticArrays → StaticArraysChainRulesCoreExt
  35.4 s  ✓ Adapt → AdaptStaticArraysExt
  35.5 s  ✓ ConstructionBase → ConstructionBaseStaticArraysExt
  35.2 s  ✓ Accessors → StaticArraysExt
  34.5 s  ✓ SymbolicIndexingInterface
  71.8 s  ✓ SpecialFunctions → SpecialFunctionsChainRulesCoreExt
  72.5 s  ✓ Measurements → MeasurementsSpecialFunctionsExt
   1.8 s  ✓ DiffRules
  75.5 s  ✓ RecursiveArrayTools
ERROR: LoadError: MethodError: no method matching chunk_mode_gradient_expr(::Base.JuliaSyntax.SyntaxTree{Dict{Symbol, Dict{Int64, Any}}})
The function `chunk_mode_gradient_expr` exists, but no method is defined for this combination of argument types.

Closest candidates are:
  chunk_mode_gradient_expr(!Matched::Expr)
   @ ForwardDiff ~/.julia/packages/ForwardDiff/4J2wz/src/gradient.jl:114

Stacktrace:
  [1] top-level scope
    @ ~/.julia/packages/ForwardDiff/4J2wz/src/gradient.jl:161
  [2] include(mapexpr::Function, mod::Module, _path::String)
    @ Base Base.jl:326
  [3] top-level scope
    @ ~/.julia/packages/ForwardDiff/4J2wz/src/ForwardDiff.jl:21
  [4] include(mod::Module, _path::String)
    @ Base Base.jl:325
  [5] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base loading.jl:3303
  [6] top-level scope
    @ stdin:5
  [7] eval(m::Module, e::Any)
    @ Core boot.jl:522
  [8] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base loading.jl:3132
  [9] include_string(m::Module, txt::String, fname::String)
    @ Base loading.jl:3142 [inlined]
 [10] exec_options(opts::Base.JLOptions)
    @ Base client.jl:353
 [11] _start()
    @ Base client.jl:596
in expression starting at /home/pkgeval/.julia/packages/ForwardDiff/4J2wz/src/gradient.jl:160
in expression starting at /home/pkgeval/.julia/packages/ForwardDiff/4J2wz/src/ForwardDiff.jl:1
in expression starting at stdin:5
              ✗ ForwardDiff
  70.9 s  ✓ RecursiveArrayTools → RecursiveArrayToolsMeasurementsExt
ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("f6369f11-7733-5829-9624-2563aa707210"), "ForwardDiff") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0)
Stacktrace:
  [1] error(s::String)
    @ Base error.jl:56
  [2] __require_prelocked(pkg::Base.PkgId, env::String)
    @ Base loading.jl:2837
  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base loading.jl:2685
  [4] macro expansion
    @ loading.jl:2599 [inlined]
  [5] macro expansion
    @ lock.jl:376 [inlined]
  [6] __require(into::Module, mod::Symbol)
    @ Base loading.jl:2563
  [7] require(into::Module, mod::Symbol)
    @ Base loading.jl:2539 [inlined]
  [8] eval_import_path(at::Module, from::Nothing, path::Expr, keyword::String)
    @ Base module.jl:36 [inlined]
  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)
    @ Base module.jl:60
 [10] _eval_using(to::Module, path::Expr, flags::UInt8)
    @ Base module.jl:137 [inlined]
 [11] eval_using(to::Module, path::Expr)
    @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/runtime.jl:130
 [12] top-level scope
    @ ~/.julia/packages/ForwardDiff/4J2wz/ext/ForwardDiffStaticArraysExt.jl:3
 [13] include(mod::Module, _path::String)
    @ Base Base.jl:325
 [14] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base loading.jl:3303
 [15] top-level scope
    @ stdin:5
 [16] eval(m::Module, e::Any)
    @ Core boot.jl:522
 [17] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base loading.jl:3132
 [18] include_string(m::Module, txt::String, fname::String)
    @ Base loading.jl:3142 [inlined]
 [19] exec_options(opts::Base.JLOptions)
    @ Base client.jl:353
 [20] _start()
    @ Base client.jl:596
in expression starting at /home/pkgeval/.julia/packages/ForwardDiff/4J2wz/ext/ForwardDiffStaticArraysExt.jl:1
in expression starting at stdin:5
              ✗ ForwardDiff → ForwardDiffStaticArraysExt
ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("f6369f11-7733-5829-9624-2563aa707210"), "ForwardDiff") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0)
Stacktrace:
  [1] error(s::String)
    @ Base error.jl:56
  [2] __require_prelocked(pkg::Base.PkgId, env::String)
    @ Base loading.jl:2837
  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base loading.jl:2685
  [4] macro expansion
    @ loading.jl:2599 [inlined]
  [5] macro expansion
    @ lock.jl:376 [inlined]
  [6] __require(into::Module, mod::Symbol)
    @ Base loading.jl:2563
  [7] require(into::Module, mod::Symbol)
    @ Base loading.jl:2539 [inlined]
  [8] eval_import_path(at::Module, from::Nothing, path::Expr, keyword::String)
    @ Base module.jl:36 [inlined]
  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)
    @ Base module.jl:60
 [10] _eval_using(to::Module, path::Expr, flags::UInt8)
    @ Base module.jl:137 [inlined]
 [11] eval_using(to::Module, path::Expr)
    @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/runtime.jl:130
 [12] top-level scope
    @ ~/.julia/packages/PreallocationTools/z377f/ext/PreallocationToolsForwardDiffExt.jl:4
 [13] include(mod::Module, _path::String)
    @ Base Base.jl:325
 [14] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base loading.jl:3303
 [15] top-level scope
    @ stdin:5
 [16] eval(m::Module, e::Any)
    @ Core boot.jl:522
 [17] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base loading.jl:3132
 [18] include_string(m::Module, txt::String, fname::String)
    @ Base loading.jl:3142 [inlined]
 [19] exec_options(opts::Base.JLOptions)
    @ Base client.jl:353
 [20] _start()
    @ Base client.jl:596
in expression starting at /home/pkgeval/.julia/packages/PreallocationTools/z377f/ext/PreallocationToolsForwardDiffExt.jl:1
in expression starting at stdin:5
              ✗ PreallocationTools → PreallocationToolsForwardDiffExt
ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("f6369f11-7733-5829-9624-2563aa707210"), "ForwardDiff") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0)
Stacktrace:
  [1] error(s::String)
    @ Base error.jl:56
  [2] __require_prelocked(pkg::Base.PkgId, env::String)
    @ Base loading.jl:2837
  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base loading.jl:2685
  [4] macro expansion
    @ loading.jl:2599 [inlined]
  [5] macro expansion
    @ lock.jl:376 [inlined]
  [6] __require(into::Module, mod::Symbol)
    @ Base loading.jl:2563
  [7] require(into::Module, mod::Symbol)
    @ Base loading.jl:2539 [inlined]
  [8] eval_import_path(at::Module, from::Nothing, path::Expr, keyword::String)
    @ Base module.jl:36 [inlined]
  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)
    @ Base module.jl:60
 [10] _eval_using(to::Module, path::Expr, flags::UInt8)
    @ Base module.jl:137 [inlined]
 [11] eval_using(to::Module, path::Expr)
    @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/runtime.jl:130
 [12] top-level scope
    @ ~/.julia/packages/RecursiveArrayTools/teqfy/ext/RecursiveArrayToolsForwardDiffExt.jl:4
 [13] include(mod::Module, _path::String)
    @ Base Base.jl:325
 [14] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base loading.jl:3303
 [15] top-level scope
    @ stdin:5
 [16] eval(m::Module, e::Any)
    @ Core boot.jl:522
 [17] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base loading.jl:3132
 [18] include_string(m::Module, txt::String, fname::String)
    @ Base loading.jl:3142 [inlined]
 [19] exec_options(opts::Base.JLOptions)
    @ Base client.jl:353
 [20] _start()
    @ Base client.jl:596
in expression starting at /home/pkgeval/.julia/packages/RecursiveArrayTools/teqfy/ext/RecursiveArrayToolsForwardDiffExt.jl:1
in expression starting at stdin:5
              ✗ RecursiveArrayTools → RecursiveArrayToolsForwardDiffExt
ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("f6369f11-7733-5829-9624-2563aa707210"), "ForwardDiff") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0)
Stacktrace:
  [1] error(s::String)
    @ Base error.jl:56
  [2] __require_prelocked(pkg::Base.PkgId, env::String)
    @ Base loading.jl:2837
  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base loading.jl:2685
  [4] macro expansion
    @ loading.jl:2599 [inlined]
  [5] macro expansion
    @ lock.jl:376 [inlined]
  [6] __require(into::Module, mod::Symbol)
    @ Base loading.jl:2563
  [7] require(into::Module, mod::Symbol)
    @ Base loading.jl:2539 [inlined]
  [8] eval_import_path(at::Module, from::Nothing, path::Expr, keyword::String)
    @ Base module.jl:36 [inlined]
  [9] _eval_import(imported::Bool, to::Module, from::Nothing, paths::Expr)
    @ Base module.jl:111
 [10] eval_import(imported::Bool, to::Module, from::Nothing, paths::Expr)
    @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/runtime.jl:118
 [11] top-level scope
    @ ~/.julia/packages/LabelledArrays/PZca9/src/LabelledArrays.jl:4
 [12] include(mod::Module, _path::String)
    @ Base Base.jl:325
 [13] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base loading.jl:3303
 [14] top-level scope
    @ stdin:5
 [15] eval(m::Module, e::Any)
    @ Core boot.jl:522
 [16] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base loading.jl:3132
 [17] include_string(m::Module, txt::String, fname::String)
    @ Base loading.jl:3142 [inlined]
 [18] exec_options(opts::Base.JLOptions)
    @ Base client.jl:353
 [19] _start()
    @ Base client.jl:596
in expression starting at /home/pkgeval/.julia/packages/LabelledArrays/PZca9/src/LabelledArrays.jl:1
in expression starting at stdin:5
              ✗ LabelledArrays
ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("2ee39098-c373-598a-b85f-a56591580800"), "LabelledArrays") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0)
Stacktrace:
  [1] error(s::String)
    @ Base error.jl:56
  [2] __require_prelocked(pkg::Base.PkgId, env::String)
    @ Base loading.jl:2837
  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base loading.jl:2685
  [4] macro expansion
    @ loading.jl:2599 [inlined]
  [5] macro expansion
    @ lock.jl:376 [inlined]
  [6] __require(into::Module, mod::Symbol)
    @ Base loading.jl:2563
  [7] require(into::Module, mod::Symbol)
    @ Base loading.jl:2539 [inlined]
  [8] eval_import_path(at::Module, from::Nothing, path::Expr, keyword::String)
    @ Base module.jl:36 [inlined]
  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)
    @ Base module.jl:60
 [10] _eval_using(to::Module, path::Expr, flags::UInt8)
    @ Base module.jl:137 [inlined]
 [11] eval_using(to::Module, path::Expr)
    @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/runtime.jl:130
 [12] top-level scope
    @ ~/.julia/packages/Glycolysis/2kqOM/src/model_parameters.jl:1
 [13] include(mapexpr::Function, mod::Module, _path::String)
    @ Base Base.jl:326
 [14] top-level scope
    @ ~/.julia/packages/Glycolysis/2kqOM/src/Glycolysis.jl:5
 [15] include(mod::Module, _path::String)
    @ Base Base.jl:325
 [16] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base loading.jl:3303
 [17] top-level scope
    @ stdin:5
 [18] eval(m::Module, e::Any)
    @ Core boot.jl:522
 [19] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base loading.jl:3132
 [20] include_string(m::Module, txt::String, fname::String)
    @ Base loading.jl:3142 [inlined]
 [21] exec_options(opts::Base.JLOptions)
    @ Base client.jl:353
 [22] _start()
    @ Base client.jl:596
in expression starting at /home/pkgeval/.julia/packages/Glycolysis/2kqOM/src/model_parameters.jl:1
in expression starting at /home/pkgeval/.julia/packages/Glycolysis/2kqOM/src/Glycolysis.jl:1
in expression starting at stdin:5
              ✗ Glycolysis
  52 dependencies successfully precompiled in 2453 seconds. 14 already precompiled.

Precompilation completed after 2496.05s


################################################################################
# Testing
#

     Testing Glycolysis
      Status `/tmp/jl_QRxnWu/Project.toml`
  [1acb6d80] Glycolysis v0.7.6
  [2ee39098] LabelledArrays v1.20.0
  [eff96d63] Measurements v2.14.1
  [8dfed614] Test v1.11.0
      Status `/tmp/jl_QRxnWu/Manifest.toml`
  [7d9f7c33] Accessors v0.1.45
  [79e6a3ab] Adapt v4.7.0
  [4fba245c] ArrayInterface v7.27.0
  [49dc2e85] Calculus v0.5.2
  [d360d2e6] ChainRulesCore v1.26.1
  [bbf7d656] CommonSubexpressions v0.3.1
  [34da2185] Compat v4.18.1
  [a33af91c] CompositionsBase v0.1.2
  [187b0558] ConstructionBase v1.6.0
  [163ba53b] DiffResults v1.1.0
  [b552c78f] DiffRules v1.16.0
  [ffbed154] DocStringExtensions v0.9.5
  [e2ba6199] ExprTools v0.1.10
  [f6369f11] ForwardDiff v1.4.1
  [46192b85] GPUArraysCore v0.2.0
  [1acb6d80] Glycolysis v0.7.6
  [3587e190] InverseFunctions v0.1.17
  [92d709cd] IrrationalConstants v0.2.6
  [692b3bcd] JLLWrappers v1.8.0
  [2ee39098] LabelledArrays v1.20.0
  [2ab3a3ac] LogExpFunctions v1.0.1
  [1914dd2f] MacroTools v0.5.16
  [eff96d63] Measurements v2.14.1
  [77ba4419] NaNMath v1.1.4
  [d236fae5] PreallocationTools v1.2.1
  [aea7be01] PrecompileTools v1.3.4
  [21216c6a] Preferences v1.5.2
  [3cdcf5f2] RecipesBase v1.3.4
  [731186ca] RecursiveArrayTools v4.3.2
  [7e49a35a] RuntimeGeneratedFunctions v0.5.21
  [276daf66] SpecialFunctions v2.8.0
  [90137ffa] StaticArrays v1.9.18
  [1e83bf80] StaticArraysCore v1.4.4
  [2efcf032] SymbolicIndexingInterface v0.3.49
  [efe28fd5] OpenSpecFun_jll v0.5.6+0
  [56f22d72] Artifacts v1.11.0
  [2a0f44e3] Base64 v1.11.0
  [ade2ca70] Dates v1.11.0
  [b77e0a4c] InteractiveUtils v1.11.0
  [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0
  [8f399da3] Libdl v1.11.0
  [37e2e46d] LinearAlgebra v1.14.0
  [56ddb016] Logging v1.11.0
  [d6f4376e] Markdown v1.11.0
  [de0858da] Printf v1.11.0
  [9a3f8284] Random v1.11.0
  [ea8e919c] SHA v1.13.0
  [9e88b42a] Serialization v1.11.0
  [f489334b] StyledStrings v1.13.0
  [fa267f1f] TOML v1.0.3
  [8dfed614] Test v1.11.0
  [cf7118a7] UUIDs v1.11.0
  [4ec0a83e] Unicode v1.11.0
  [e66e0078] CompilerSupportLibraries_jll v1.5.5+2
  [4536629a] OpenBLAS_jll v0.3.33+0
  [05823500] OpenLibm_jll v0.8.7+0
  [8e850b90] libblastrampoline_jll v5.15.0+0
     Testing Running tests...

======================================================================================
Information request received. A stacktrace will print followed by a 1.0 second profile.
--trace-compile is enabled during profile collection.
======================================================================================

cmd: /opt/julia/bin/julia 304 running 1 of 1

signal (10): User defined signal 1
_ZN4llvm9MemorySSAD1Ev at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line)
_ZN4llvm6detail19AnalysisResultModelINS_8FunctionENS_17MemorySSAAnalysisENS3_6ResultENS_15AnalysisManagerIS2_JEE11InvalidatorELb1EED0Ev at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line)
_ZN4llvm15AnalysisManagerINS_8FunctionEJEE10invalidateERS1_RKNS_17PreservedAnalysesE at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line)
_ZN4llvm11PassManagerINS_8FunctionENS_15AnalysisManagerIS1_JEEEJEE3runERS1_RS3_ at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line)
run at /source/usr/include/llvm/IR/PassManagerInternal.h:91:41
_ZN4llvm27ModuleToFunctionPassAdaptor3runERNS_6ModuleERNS_15AnalysisManagerIS1_JEEE at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line)
run at /source/usr/include/llvm/IR/PassManagerInternal.h:91:41
_ZN4llvm11PassManagerINS_6ModuleENS_15AnalysisManagerIS1_JEEEJEE3runERS1_RS3_ at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line)
run at /source/src/pipeline.cpp:989:12
operator() at /source/src/jitlayers.cpp:1271:17
operator() at /source/src/jitlayers.cpp:1409:12 [inlined]
optimizeModule at /source/src/jitlayers.cpp:2360:18
materialize at /source/src/jitlayers.cpp:876:31
_ZN4llvm3orc19MaterializationTask3runEv at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line)
dispatch at /source/src/julia-task-dispatcher.h:361:11
_ZN4llvm3orc16ExecutionSession22dispatchOutstandingMUsEv at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line)
_ZN4llvm3orc16ExecutionSession17OL_completeLookupESt10unique_ptrINS0_21InProgressLookupStateESt14default_deleteIS3_EESt10shared_ptrINS0_23AsynchronousSymbolQueryEESt8functionIFvRKNS_8DenseMapIPNS0_8JITDylibENS_8DenseSetINS0_15SymbolStringPtrENS_12DenseMapInfoISF_vEEEENSG_ISD_vEENS_6detail12DenseMapPairISD_SI_EEEEEE at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line)
_ZN4llvm3orc25InProgressFullLookupState8completeESt10unique_ptrINS0_21InProgressLookupStateESt14default_deleteIS3_EE at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line)
_ZN4llvm3orc16ExecutionSession19OL_applyQueryPhase1ESt10unique_ptrINS0_21InProgressLookupStateESt14default_deleteIS3_EENS_5ErrorE at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line)
_ZN4llvm3orc16ExecutionSession6lookupENS0_10LookupKindERKSt6vectorISt4pairIPNS0_8JITDylibENS0_19JITDylibLookupFlagsEESaIS8_EENS0_15SymbolLookupSetENS0_11SymbolStateENS_15unique_functionIFvNS_8ExpectedINS_8DenseMapINS0_15SymbolStringPtrENS0_17ExecutorSymbolDefENS_12DenseMapInfoISI_vEENS_6detail12DenseMapPairISI_SJ_EEEEEEEEESt8functionIFvRKNSH_IS6_NS_8DenseSetISI_SL_EENSK_IS6_vEENSN_IS6_SV_EEEEEE at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line)
publishCIs at /source/src/jitlayers.cpp:2059:14
jl_compile_codeinst_impl at /source/src/jitlayers.cpp:511:39
jl_compile_method_very_internal at /source/src/gf.c:3927:27
_jl_invoke at /source/src/gf.c:4337:16 [inlined]
ijl_apply_generic at /source/src/gf.c:4583:12
core_lowering_hook at /source/usr/share/julia/JuliaLowering/src/hooks.jl:30:0 (pc: 111)
unknown function (ip: 0x74b2b5ff6e55) at (unknown file)
_jl_invoke at /source/src/gf.c:4345:23 [inlined]
ijl_apply_generic at /source/src/gf.c:4583:12
jl_apply at /source/src/julia.h:2405:12 [inlined]
ijl_lower at /source/src/ast.c:1271:26
jl_eval_toplevel_stmts at /source/src/toplevel.c:594:31
jl_toplevel_eval_flex at /source/src/toplevel.c:680:27
ijl_toplevel_eval at /source/src/toplevel.c:778:12
ijl_toplevel_eval_in at /source/src/toplevel.c:823:13
eval at ./boot.jl:522:0 (pc: 1)
include_string at ./loading.jl:3132:0 (pc: 208)
_jl_invoke at /source/src/gf.c:4345:23 [inlined]
ijl_apply_generic at /source/src/gf.c:4583:12
_include at ./loading.jl:3192:0 (pc: 122)
include at ./Base.jl:326:0 (pc: 1)
IncludeInto at ./Base.jl:327:0 (pc: 2)
jfptr_IncludeInto_1.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:4345:23 [inlined]
ijl_apply_generic at /source/src/gf.c:4583:12
jl_apply at /source/src/julia.h:2405:12 [inlined]
do_call at /source/src/interpreter.c:123:26
eval_value at /source/src/interpreter.c:259:16
eval_stmt_value at /source/src/interpreter.c:194:23 [inlined]
eval_body at /source/src/interpreter.c:757:13
jl_interpret_toplevel_thunk at /source/src/interpreter.c:947:21
ijl_eval_thunk at /source/src/toplevel.c:764:18
jl_toplevel_eval_flex at /source/src/toplevel.c:708:26
jl_eval_toplevel_stmts at /source/src/toplevel.c:598:15
jl_eval_module_expr at /source/src/toplevel.c:262:5 [inlined]
jl_toplevel_eval_flex at /source/src/toplevel.c:661:27
jl_eval_toplevel_stmts at /source/src/toplevel.c:598:15
jl_toplevel_eval_flex at /source/src/toplevel.c:680:27
ijl_toplevel_eval at /source/src/toplevel.c:778:12
ijl_toplevel_eval_in at /source/src/toplevel.c:823:13
eval at ./boot.jl:522:0 (pc: 1)
include_string at ./loading.jl:3132:0 (pc: 208)
_jl_invoke at /source/src/gf.c:4345:23 [inlined]
ijl_apply_generic at /source/src/gf.c:4583:12
_include at ./loading.jl:3192:0 (pc: 122)
include at ./Base.jl:325:0 (pc: 1)
include_package_for_output at ./loading.jl:3303:0 (pc: 848)
jfptr_include_package_for_output_1.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:4345:23 [inlined]
ijl_apply_generic at /source/src/gf.c:4583:12
jl_apply at /source/src/julia.h:2405:12 [inlined]
do_call at /source/src/interpreter.c:123:26
eval_value at /source/src/interpreter.c:259:16
eval_stmt_value at /source/src/interpreter.c:194:23 [inlined]
eval_body at /source/src/interpreter.c:757:13
jl_interpret_toplevel_thunk at /source/src/interpreter.c:947:21
ijl_eval_thunk at /source/src/toplevel.c:764:18
jl_toplevel_eval_flex at /source/src/toplevel.c:708:26
jl_eval_toplevel_stmts at /source/src/toplevel.c:598:15
jl_toplevel_eval_flex at /source/src/toplevel.c:680:27
ijl_toplevel_eval at /source/src/toplevel.c:778:12
ijl_toplevel_eval_in at /source/src/toplevel.c:823:13
eval at ./boot.jl:522:0 (pc: 1)
include_string at ./loading.jl:3132:0 (pc: 208)
include_string at ./loading.jl:3142:0 [inlined]
exec_options at ./client.jl:353:0 (pc: 813)
_start at ./client.jl:596:0 (pc: 295)
jfptr__start_0.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:4345:23 [inlined]
ijl_apply_generic at /source/src/gf.c:4583:12
jl_apply at /source/src/julia.h:2405:12 [inlined]
true_main at /source/src/jlapi.c:985:29
jl_repl_entrypoint at /source/src/jlapi.c:1152:15
main at /source/cli/loader_exe.c:58:15
unknown function (ip: 0x74b2dbd17249) at /lib/x86_64-linux-gnu/libc.so.6
__libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line)
unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S
unknown function (ip: (nil)) at (unknown file)


==============================================================
Profile collected. A report will print at the next yield point.
Disabling --trace-compile
==============================================================


======================================================================================
Information request received. A stacktrace will print followed by a 1.0 second profile.
--trace-compile is enabled during profile collection.
======================================================================================

cmd: /opt/julia/bin/julia 301 running 0 of 1

signal (10): User defined signal 1
epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line)
uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404:0
uv_run at /workspace/srcdir/libuv/src/unix/core.c:430:0
ijl_task_get_next at /source/src/scheduler.c:524:34
wait at ./task.jl:1248:0 (pc: 107)
wait_forever at ./task.jl:1170:0 (pc: 4)
jfptr_wait_forever_0.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:4345:23 [inlined]
ijl_apply_generic at /source/src/gf.c:4583:12
jl_apply at /source/src/julia.h:2405:12 [inlined]
start_task at /source/src/task.c:1276:19
unknown function (ip: (nil)) at (unknown file)


==============================================================
Profile collected. A report will print at the next yield point.
Disabling --trace-compile
==============================================================

┌ Warning: There were no samples collected in one or more groups.
│ This may be due to idle threads, or you may need to run your
│ program longer (perhaps by running it multiple times),
│ or adjust the delay between samples with `Profile.init()`.
└ @ Profile /opt/julia/share/julia/stdlib/v1.14/Profile/src/Profile.jl:1361
Overhead ╎ [+additional indent] Count File:Line  Function
=========================================================
Thread 1 (default) Task 0x00007a2dd904f0d0 Total snapshots: 349. Utilization: 0%
   ╎349 @Base/task.jl:1170  wait_forever()
348╎ 349 @Base/task.jl:1248  wait()


======================================================================================
Information request received. A stacktrace will print followed by a 1.0 second profile.
--trace-compile is enabled during profile collection.
======================================================================================

cmd: /opt/julia/bin/julia 1 running 0 of 1

signal (10): User defined signal 1
epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line)
uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404:0
uv_run at /workspace/srcdir/libuv/src/unix/core.c:430:0
ijl_task_get_next at /source/src/scheduler.c:524:34
wait at ./task.jl:1248:0 (pc: 107)
wait_forever at ./task.jl:1170:0 (pc: 4)
jfptr_wait_forever_0.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:4345:23 [inlined]
ijl_apply_generic at /source/src/gf.c:4583:12
jl_apply at /source/src/julia.h:2405:12 [inlined]
start_task at /source/src/task.c:1276:19
unknown function (ip: (nil)) at (unknown file)


==============================================================
Profile collected. A report will print at the next yield point.
Disabling --trace-compile
==============================================================

┌ Warning: There were no samples collected in one or more groups.
│ This may be due to idle threads, or you may need to run your
│ program longer (perhaps by running it multiple times),
│ or adjust the delay between samples with `Profile.init()`.
└ @ Profile /opt/julia/share/julia/stdlib/v1.14/Profile/src/Profile.jl:1361
Overhead ╎ [+additional indent] Count File:Line  Function
=========================================================
Thread 1 (default) Task 0x0000729a9e07da50 Total snapshots: 353. Utilization: 0%
   ╎353 @Base/task.jl:1170  wait_forever()
352╎ 353 @Base/task.jl:1248  wait()

│   exception =
│    This interactive function requires a stdlib to be loaded, and package code should instead use it directly from that stdlib.
│    Stacktrace:
│     [1] error(s::String)
│       @ Base error.jl:56
│     [2] require_stdlib(package_uuidkey::Base.PkgId, ext::Nothing, from::Module)
│       @ Base loading.jl:3024
│     [3] require_stdlib(package_uuidkey::Base.PkgId)
│       @ Base loading.jl:3020 [inlined]
│     [4] macro expansion
│       @ some.jl:157 [inlined]
│     [5] profile_printing_listener(cond::Base.AsyncCondition)
│       @ Base Base.jl:357
│     [6] (::Base.var"#start_profile_listener##0#start_profile_listener##1"{Base.AsyncCondition})()
│       @ Base Base.jl:376
└ @ Base Base.jl:367
164696847983 deps_ns=386754085 compilation_ns=160305403212 methods=2286
ERROR: LoadError: MethodError: no method matching chunk_mode_gradient_expr(::Base.JuliaSyntax.SyntaxTree{Dict{Symbol, Dict{Int64, Any}}})

[1] signal 15: Terminated
in expression starting at /PkgEval.jl/scripts/evaluate.jl:214
epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line)
uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404:0
uv_run at /workspace/srcdir/libuv/src/unix/core.c:430:0
ijl_task_get_next at /source/src/scheduler.c:524:34
wait at ./task.jl:1248:0 (pc: 107)
wait_forever at ./task.jl:1170:0 (pc: 4)
jfptr_wait_forever_0.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:4345:23 [inlined]
ijl_apply_generic at /source/src/gf.c:4583:12
jl_apply at /source/src/julia.h:2405:12 [inlined]
start_task at /source/src/task.c:1276:19
unknown function (ip: (nil)) at (unknown file)
Allocations: 26116002 (Pool: 26115224; Big: 778); GC: 29

[301] signal 15: Terminated
in expression starting at /home/pkgeval/.julia/packages/Glycolysis/2kqOM/test/runtests.jl:1
epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line)
uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404:0
uv_run at /workspace/srcdir/libuv/src/unix/core.c:430:0
ijl_task_get_next at /source/src/scheduler.c:524:34
wait at ./task.jl:1248:0 (pc: 107)
wait_forever at ./task.jl:1170:0 (pc: 4)
jfptr_wait_forever_0.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:4345:23 [inlined]
ijl_apply_generic at /source/src/gf.c:4583:12
jl_apply at /source/src/julia.h:2405:12 [inlined]
start_task at /source/src/task.c:1276:19
unknown function (ip: (nil)) at (unknown file)
Allocations: 1108650 (Pool: 1108640; Big: 10); GC: 2
val already in a list
atexit hook threw an error: ErrorException("schedule: Task not runnable")
error at ./error.jl:56:0 (pc: 6)
#schedule#625 at ./task.jl:1053:0 (pc: 71)
schedule at ./task.jl:1045:0 [inlined]
uv_writecb_task at ./stream.jl:1198:0 (pc: 11)
jlcapi_uv_writecb_task_512.1 at /opt/julia/lib/julia/sys.so (unknown line)
uv__write_callbacks at /workspace/srcdir/libuv/src/unix/stream.c:926:0
uv__stream_io at /workspace/srcdir/libuv/src/unix/stream.c:1227:0
uv__run_pending at /workspace/srcdir/libuv/src/unix/core.c:824:0
uv_run at /workspace/srcdir/libuv/src/unix/core.c:420:0
ijl_process_events at /source/src/jl_uv.c:397:21
process_events at ./libuv.jl:133:0 [inlined]
wait at ./task.jl:1235:0 (pc: 15)
uv_write at ./stream.jl:1079:0 (pc: 11)
unsafe_write at ./stream.jl:1152:0 (pc: 55)
write at ./strings/io.jl:237:0 [inlined]
print at ./strings/io.jl:239:0 (pc: 5)
jfptr_print_129.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:4345:23 [inlined]
ijl_apply_generic at /source/src/gf.c:4583:12
showerror at ./errorshow.jl:164:0 (pc: 2)
unknown function (ip: 0x7a2dd67210e6) at (unknown file)
_jl_invoke at /source/src/gf.c:4345:23 [inlined]
ijl_apply_generic at /source/src/gf.c:4583:12
_atexit at ./initdefs.jl:544:0 (pc: 211)
jfptr__atexit_0.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:4345:23 [inlined]
ijl_apply_generic at /source/src/gf.c:4583:12
jl_apply at /source/src/julia.h:2405:12 [inlined]
ijl_atexit_hook at /source/src/init.c:264:17
jl_exit_thread0_cb at /source/src/signals-unix.c:678:5
jl_fake_signal_return at /opt/julia/bin/../lib/julia/libjulia-internal.so.1.14 (unknown line)
epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line)
uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404:0
uv_run at /workspace/srcdir/libuv/src/unix/core.c:430:0
ijl_task_get_next at /source/src/scheduler.c:524:34
wait at ./task.jl:1248:0 (pc: 107)
wait_forever at ./task.jl:1170:0 (pc: 4)
jfptr_wait_forever_0.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:4345:23 [inlined]
ijl_apply_generic at /source/src/gf.c:4583:12
jl_apply at /source/src/julia.h:2405:12 [inlined]
start_task at /source/src/task.c:1276:19

PkgEval terminated after 2731.7s: test duration exceeded the time limit