Package evaluation to test AssignTaxonomy on Julia 1.14.0-DEV.2593 (15c2b67521*) started at 2026-07-04T01:25:16.147 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 14.88s ################################################################################ # Installation # Installing AssignTaxonomy... Resolving package versions... Installed Adapt ──────────────────────────── v4.7.0 Installed CommonWorldInvalidations ───────── v1.1.0 Installed ArrayInterface ─────────────────── v7.27.0 Installed OrderedCollections ─────────────── v2.0.1 Installed ManualMemory ───────────────────── v0.1.8 Installed BitTwiddlingConvenienceFunctions ─ v0.1.6 Installed SIMDTypes ──────────────────────── v0.1.0 Installed StringViews ────────────────────── v1.3.7 Installed TranscodingStreams ─────────────── v0.11.3 Installed Compat ─────────────────────────── v4.18.1 Installed StrideArraysCore ───────────────── v0.5.9 Installed IteratorInterfaceExtensions ────── v1.0.0 Installed Kmers ──────────────────────────── v1.2.0 Installed DataValueInterfaces ────────────── v1.0.0 Installed DataAPI ────────────────────────── v1.16.0 Installed CpuId ──────────────────────────── v0.3.1 Installed PrecompileTools ────────────────── v1.3.4 Installed Twiddle ────────────────────────── v1.1.2 Installed LayoutPointers ─────────────────── v0.1.17 Installed SciMLPublic ────────────────────── v1.2.1 Installed BioSymbols ─────────────────────── v5.2.0 Installed StaticArrayInterface ───────────── v1.10.0 Installed CPUSummary ─────────────────────── v0.2.7 Installed StringManipulation ─────────────── v0.4.4 Installed IfElse ─────────────────────────── v0.1.1 Installed BioGenerics ────────────────────── v0.1.5 Installed AssignTaxonomy ─────────────────── v0.1.2 Installed PrettyTables ───────────────────── v2.4.0 Installed Tables ─────────────────────────── v1.13.0 Installed Static ─────────────────────────── v1.4.2 Installed CloseOpenIntervals ─────────────── v0.1.13 Installed Polyester ──────────────────────── v0.7.19 Installed ThreadingUtilities ─────────────── v0.5.6 Installed Automa ─────────────────────────── v1.2.0 Installed Reexport ───────────────────────── v1.2.2 Installed TableTraits ────────────────────── v1.0.1 Installed LaTeXStrings ───────────────────── v1.4.0 Installed FASTX ──────────────────────────── v2.1.7 Installed Preferences ────────────────────── v1.5.2 Installed Crayons ────────────────────────── v4.1.1 Installed PolyesterWeave ─────────────────── v0.2.2 Installed BioSequences ───────────────────── v3.4.2 Updating `~/.julia/environments/v1.14/Project.toml` [941572e2] + AssignTaxonomy v0.1.2 Updating `~/.julia/environments/v1.14/Manifest.toml` [79e6a3ab] + Adapt v4.7.0 [4fba245c] + ArrayInterface v7.27.0 [941572e2] + AssignTaxonomy v0.1.2 [67c07d97] + Automa v1.2.0 [47718e42] + BioGenerics v0.1.5 ⌅ [7e6ae17a] + BioSequences v3.4.2 [3c28c6f8] + BioSymbols v5.2.0 [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 [2a0fbf3d] + CPUSummary v0.2.7 [fb6a15b2] + CloseOpenIntervals v0.1.13 [f70d9fcc] + CommonWorldInvalidations v1.1.0 [34da2185] + Compat v4.18.1 [adafc99b] + CpuId v0.3.1 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [e2d170a0] + DataValueInterfaces v1.0.0 [c2308a5c] + FASTX v2.1.7 [615f187c] + IfElse v0.1.1 [82899510] + IteratorInterfaceExtensions v1.0.0 [445028e4] + Kmers v1.2.0 [b964fa9f] + LaTeXStrings v1.4.0 [10f19ff3] + LayoutPointers v0.1.17 [d125e4d3] + ManualMemory v0.1.8 [bac558e1] + OrderedCollections v2.0.1 [f517fe37] + Polyester v0.7.19 [1d0040c9] + PolyesterWeave v0.2.2 [aea7be01] + PrecompileTools v1.3.4 [21216c6a] + Preferences v1.5.2 ⌅ [08abe8d2] + PrettyTables v2.4.0 [189a3867] + Reexport v1.2.2 [94e857df] + SIMDTypes v0.1.0 [431bcebd] + SciMLPublic v1.2.1 [aedffcd0] + Static v1.4.2 [0d7ed370] + StaticArrayInterface v1.10.0 [7792a7ef] + StrideArraysCore v0.5.9 [892a3eda] + StringManipulation v0.4.4 ⌅ [354b36f9] + StringViews v1.3.7 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.13.0 [8290d209] + ThreadingUtilities v0.5.6 [3bb67fe8] + TranscodingStreams v0.11.3 [7200193e] + Twiddle v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.14.0 [d6f4376e] + Markdown v1.11.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.13.0 [f489334b] + StyledStrings v1.13.0 [fa267f1f] + TOML v1.0.3 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.5.5+2 [4536629a] + OpenBLAS_jll v0.3.33+0 [8e850b90] + libblastrampoline_jll v5.15.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 5.92s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling project... 9.0 s ✓ TestEnv 1 dependency successfully precompiled in 9 seconds. 27 already precompiled. Precompiling package dependencies... Precompiling project... 1.5 s ✓ ManualMemory 0.6 s ✓ Reexport 1.7 s ✓ Adapt 1.1 s ✓ DataAPI 0.8 s ✓ SciMLPublic 435.4 s ✓ CommonWorldInvalidations 0.7 s ✓ DataValueInterfaces 116.4 s ✓ OrderedCollections 0.8 s ✓ Twiddle 283.9 s ✓ StringViews 0.5 s ✓ IfElse 0.5 s ✓ SIMDTypes 56.6 s ✓ TranscodingStreams 0.5 s ✓ IteratorInterfaceExtensions 26.6 s ✓ LaTeXStrings 2.4 s ✓ Crayons 2.6 s ✓ CpuId 2.2 s ✓ Compat 31.8 s ✓ Preferences 3.2 s ✓ ThreadingUtilities 2.0 s ✓ ArrayInterface 38.5 s ✓ BioGenerics 0.7 s ✓ TableTraits 0.9 s ✓ Compat → CompatLinearAlgebraExt 31.7 s ✓ PrecompileTools 151.1 s ✓ Tables 121.5 s ✓ BioSymbols 183.3 s ✓ Automa 84.8 s ✓ StringManipulation 343.8 s ✓ Static ERROR: LoadError: Creating a new global in closed module `Base` (`##->###0`) breaks incremental compilation because the side effects will not be permanent. Stacktrace:  [1] eval_closure_type(mod::Module, closure_type_name::Symbol, field_names::Core.SimpleVector, field_is_box::Core.SimpleVector)  @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/runtime.jl:96  [2] top-level scope  @ ~/.julia/packages/BioSequences/tfveE/src/counting.jl:129  [3] eval(m::Module, e::Any)  @ Core boot.jl:522  [4] _eval(mod::Module, iter::Base.JuliaLowering.LoweringIterator{Dict{Symbol, Dict{Int64, Any}}}; soft_scope::Nothing)  @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/eval.jl:745  [5] eval(mod::Module, ex::Base.JuliaSyntax.SyntaxTree{Dict{Symbol, Dict{Int64, Any}}}; macro_world::UInt64, soft_scope::Nothing, opts::@Kwargs{expr_compat_mode::Bool})  @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/eval.jl:718 [inlined]  [6] top-level scope  @ ~/.julia/packages/BioSequences/tfveE/src/counting.jl:129  [7] include(mapexpr::Function, mod::Module, _path::String)  @ Base Base.jl:326  [8] top-level scope  @ ~/.julia/packages/BioSequences/tfveE/src/BioSequences.jl:224  [9] include(mod::Module, _path::String)  @ Base Base.jl:325  [10] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base loading.jl:3303  [11] top-level scope  @ stdin:5  [12] eval(m::Module, e::Any)  @ Core boot.jl:522  [13] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base loading.jl:3132  [14] include_string(m::Module, txt::String, fname::String)  @ Base loading.jl:3142 [inlined]  [15] exec_options(opts::Base.JLOptions)  @ Base client.jl:353  [16] _start()  @ Base client.jl:596 in expression starting at /home/pkgeval/.julia/packages/BioSequences/tfveE/src/counting.jl:129 in expression starting at /home/pkgeval/.julia/packages/BioSequences/tfveE/src/BioSequences.jl:8 in expression starting at stdin:5 ✗ BioSequences 109.0 s ✓ FASTX 148.5 s ✓ PrettyTables 39.0 s ✓ BitTwiddlingConvenienceFunctions 43.1 s ✓ CPUSummary 72.3 s ✓ StaticArrayInterface ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("7e6ae17a-c86d-528c-b3b9-7f778a29fe59"), "BioSequences") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0) Stacktrace:  [1] error(s::String)  @ Base error.jl:56  [2] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base loading.jl:2837  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base loading.jl:2685  [4] macro expansion  @ loading.jl:2599 [inlined]  [5] macro expansion  @ lock.jl:376 [inlined]  [6] __require(into::Module, mod::Symbol)  @ Base loading.jl:2563  [7] require(into::Module, mod::Symbol)  @ Base loading.jl:2539 [inlined]  [8] eval_import_path(at::Module, from::Nothing, path::Expr, keyword::String)  @ Base module.jl:36 [inlined]  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base module.jl:60  [10] _eval_using(to::Module, path::Expr, flags::UInt8)  @ Base module.jl:137 [inlined]  [11] eval_using(to::Module, path::Expr)  @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/runtime.jl:130  [12] top-level scope  @ ~/.julia/packages/Kmers/SM8Rg/src/Kmers.jl:97  [13] include(mod::Module, _path::String)  @ Base Base.jl:325  [14] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base loading.jl:3303  [15] top-level scope  @ stdin:5  [16] eval(m::Module, e::Any)  @ Core boot.jl:522  [17] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base loading.jl:3132  [18] include_string(m::Module, txt::String, fname::String)  @ Base loading.jl:3142 [inlined]  [19] exec_options(opts::Base.JLOptions)  @ Base client.jl:353  [20] _start()  @ Base client.jl:596 in expression starting at /home/pkgeval/.julia/packages/Kmers/SM8Rg/src/Kmers.jl:8 in expression starting at stdin:5 ✗ Kmers ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("7e6ae17a-c86d-528c-b3b9-7f778a29fe59"), "BioSequences") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0) Stacktrace:  [1] error(s::String)  @ Base error.jl:56  [2] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base loading.jl:2837  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base loading.jl:2685  [4] macro expansion  @ loading.jl:2599 [inlined]  [5] macro expansion  @ lock.jl:376 [inlined]  [6] __require(into::Module, mod::Symbol)  @ Base loading.jl:2563  [7] require(into::Module, mod::Symbol)  @ Base loading.jl:2539 [inlined]  [8] eval_import_path(at::Module, from::Nothing, path::Expr, keyword::String)  @ Base module.jl:36 [inlined]  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base module.jl:60  [10] _eval_import(::Bool, ::Module, ::Expr, ::Expr, ::Vararg{Expr})  @ Base module.jl:101  [11] eval_import(::Bool, ::Module, ::Expr, ::Expr, ::Vararg{Expr})  @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/runtime.jl:118  [12] top-level scope  @ ~/.julia/packages/FASTX/KGKFv/ext/BioSequencesExt.jl:4  [13] include(mod::Module, _path::String)  @ Base Base.jl:325  [14] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base loading.jl:3303  [15] top-level scope  @ stdin:5  [16] eval(m::Module, e::Any)  @ Core boot.jl:522  [17] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base loading.jl:3132  [18] include_string(m::Module, txt::String, fname::String)  @ Base loading.jl:3142 [inlined]  [19] exec_options(opts::Base.JLOptions)  @ Base client.jl:353  [20] _start()  @ Base client.jl:596 in expression starting at /home/pkgeval/.julia/packages/FASTX/KGKFv/ext/BioSequencesExt.jl:1 in expression starting at stdin:5 ✗ FASTX → BioSequencesExt 77.9 s ✓ PolyesterWeave 58.7 s ✓ CloseOpenIntervals  ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile. --trace-compile is enabled during profile collection. ======================================================================================  cmd: /opt/julia/bin/julia 263 running 1 of 1  signal (10): User defined signal 1 _ZL7runImplRN4llvm8FunctionERKNS_14TargetLoweringE at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line) _ZN4llvm13FPPassManager13runOnFunctionERNS_8FunctionE at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line) _ZN4llvm13FPPassManager11runOnModuleERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line) _ZN4llvm6legacy15PassManagerImpl3runERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line) operator() at /source/src/jitlayers.cpp:1388:23 compileModule at /source/src/jitlayers.cpp:2368:79 materialize at /source/src/jitlayers.cpp:877:36 _ZN4llvm3orc19MaterializationTask3runEv at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line) dispatch at /source/src/julia-task-dispatcher.h:361:11 _ZN4llvm3orc16ExecutionSession22dispatchOutstandingMUsEv at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line) _ZN4llvm3orc16ExecutionSession17OL_completeLookupESt10unique_ptrINS0_21InProgressLookupStateESt14default_deleteIS3_EESt10shared_ptrINS0_23AsynchronousSymbolQueryEESt8functionIFvRKNS_8DenseMapIPNS0_8JITDylibENS_8DenseSetINS0_15SymbolStringPtrENS_12DenseMapInfoISF_vEEEENSG_ISD_vEENS_6detail12DenseMapPairISD_SI_EEEEEE at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line) _ZN4llvm3orc25InProgressFullLookupState8completeESt10unique_ptrINS0_21InProgressLookupStateESt14default_deleteIS3_EE at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line) _ZN4llvm3orc16ExecutionSession19OL_applyQueryPhase1ESt10unique_ptrINS0_21InProgressLookupStateESt14default_deleteIS3_EENS_5ErrorE at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line) _ZN4llvm3orc16ExecutionSession6lookupENS0_10LookupKindERKSt6vectorISt4pairIPNS0_8JITDylibENS0_19JITDylibLookupFlagsEESaIS8_EENS0_15SymbolLookupSetENS0_11SymbolStateENS_15unique_functionIFvNS_8ExpectedINS_8DenseMapINS0_15SymbolStringPtrENS0_17ExecutorSymbolDefENS_12DenseMapInfoISI_vEENS_6detail12DenseMapPairISI_SJ_EEEEEEEEESt8functionIFvRKNSH_IS6_NS_8DenseSetISI_SL_EENSK_IS6_vEENSN_IS6_SV_EEEEEE at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line) publishCIs at /source/src/jitlayers.cpp:2059:14 jl_compile_codeinst_impl at /source/src/jitlayers.cpp:511:39 jl_compile_method_very_internal at /source/src/gf.c:3927:27 _jl_invoke at /source/src/gf.c:4337:16 [inlined] ijl_apply_generic at /source/src/gf.c:4583:12 core_lowering_hook at /source/usr/share/julia/JuliaLowering/src/hooks.jl:30:0 (pc: 111) unknown function (ip: 0x71e88d710de5) at (unknown file) _jl_invoke at /source/src/gf.c:4345:23 [inlined] ijl_apply_generic at /source/src/gf.c:4583:12 jl_apply at /source/src/julia.h:2405:12 [inlined] ijl_lower at /source/src/ast.c:1271:26 jl_eval_toplevel_stmts at /source/src/toplevel.c:594:31 jl_eval_module_expr at /source/src/toplevel.c:262:5 [inlined] jl_toplevel_eval_flex at /source/src/toplevel.c:661:27 jl_eval_toplevel_stmts at /source/src/toplevel.c:598:15 jl_toplevel_eval_flex at /source/src/toplevel.c:680:27 ijl_toplevel_eval at /source/src/toplevel.c:778:12 ijl_toplevel_eval_in at /source/src/toplevel.c:823:13 eval at ./boot.jl:522:0 (pc: 1) include_string at ./loading.jl:3132:0 (pc: 208) _jl_invoke at /source/src/gf.c:4345:23 [inlined] ijl_apply_generic at /source/src/gf.c:4583:12 _include at ./loading.jl:3192:0 (pc: 122) include at ./Base.jl:325:0 (pc: 1) include_package_for_output at ./loading.jl:3303:0 (pc: 848) jfptr_include_package_for_output_1.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4345:23 [inlined] ijl_apply_generic at /source/src/gf.c:4583:12 jl_apply at /source/src/julia.h:2405:12 [inlined] do_call at /source/src/interpreter.c:123:26 eval_value at /source/src/interpreter.c:259:16 eval_stmt_value at /source/src/interpreter.c:194:23 [inlined] eval_body at /source/src/interpreter.c:757:13 jl_interpret_toplevel_thunk at /source/src/interpreter.c:947:21 ijl_eval_thunk at /source/src/toplevel.c:764:18 jl_toplevel_eval_flex at /source/src/toplevel.c:708:26 jl_eval_toplevel_stmts at /source/src/toplevel.c:598:15 jl_toplevel_eval_flex at /source/src/toplevel.c:680:27 ijl_toplevel_eval at /source/src/toplevel.c:778:12 ijl_toplevel_eval_in at /source/src/toplevel.c:823:13 eval at ./boot.jl:522:0 (pc: 1) include_string at ./loading.jl:3132:0 (pc: 208) include_string at ./loading.jl:3142:0 [inlined] exec_options at ./client.jl:353:0 (pc: 813) _start at ./client.jl:596:0 (pc: 295) jfptr__start_0.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4345:23 [inlined] ijl_apply_generic at /source/src/gf.c:4583:12 jl_apply at /source/src/julia.h:2405:12 [inlined] true_main at /source/src/jlapi.c:985:29 jl_repl_entrypoint at /source/src/jlapi.c:1152:15 main at /source/cli/loader_exe.c:58:15 unknown function (ip: 0x71e8aa62f249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file)   ============================================================== Profile collected. A report will print at the next yield point. Disabling --trace-compile ==============================================================  ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile. --trace-compile is enabled during profile collection. ====================================================================================== cmd: /opt/julia/bin/julia 135 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404:0 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430:0 ijl_task_get_next at /source/src/scheduler.c:524:34 wait at ./task.jl:1248:0 (pc: 107) wait_forever at ./task.jl:1170:0 (pc: 4) jfptr_wait_forever_0.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4345:23 [inlined] ijl_apply_generic at /source/src/gf.c:4583:12 jl_apply at /source/src/julia.h:2405:12 [inlined] start_task at /source/src/task.c:1276:19 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point. Disabling --trace-compile ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.14/Profile/src/Profile.jl:1361 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x00007927b08b9f00 Total snapshots: 338. Utilization: 0% ╎338 @Base/task.jl:1170 wait_forever() 337╎ 338 @Base/task.jl:1248 wait() │ exception = │ This interactive function requires a stdlib to be loaded, and package code should instead use it directly from that stdlib. │ Stacktrace: │ [1] error(s::String) │ @ Base error.jl:56 │ [2] require_stdlib(package_uuidkey::Base.PkgId, ext::Nothing, from::Module) │ @ Base loading.jl:3024 │ [3] require_stdlib(package_uuidkey::Base.PkgId) │ @ Base loading.jl:3020 [inlined] │ [4] macro expansion │ @ some.jl:157 [inlined] │ [5] profile_printing_listener(cond::Base.AsyncCondition) │ @ Base Base.jl:357 │ [6] (::Base.var"#start_profile_listener##0#start_profile_listener##1"{Base.AsyncCondition})() │ @ Base Base.jl:376 └ @ Base Base.jl:367 39960625703 deps_ns=324250571 compilation_ns=39170032206 methods=805 43.7 s ✓ LayoutPointers ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("7e6ae17a-c86d-528c-b3b9-7f778a29fe59"), "BioSequences") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0) Stacktrace:  [1] error(s::String)  @ Base error.jl:56  [2] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base loading.jl:2837  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base loading.jl:2685  [4] macro expansion  @ loading.jl:2599 [inlined]  [5] macro expansion  @ lock.jl:376 [inlined]  [6] __require(into::Module, mod::Symbol)  @ Base loading.jl:2563  [7] require(into::Module, mod::Symbol)  @ Base loading.jl:2539 [inlined]  [8] eval_import_path(at::Module, from::Nothing, path::Expr, keyword::String)  @ Base module.jl:36 [inlined]  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base module.jl:60  [10] _eval_import(::Bool, ::Module, ::Expr, ::Expr, ::Vararg{Expr})  @ Base module.jl:101  [11] eval_import(::Bool, ::Module, ::Expr, ::Expr, ::Vararg{Expr})  @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/runtime.jl:118  [12] top-level scope  @ ~/.julia/packages/Kmers/SM8Rg/ext/RandomExt.jl:5  [13] include(mod::Module, _path::String)  @ Base Base.jl:325  [14] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base loading.jl:3303  [15] top-level scope  @ stdin:5  [16] eval(m::Module, e::Any)  @ Core boot.jl:522  [17] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base loading.jl:3132  [18] include_string(m::Module, txt::String, fname::String)  @ Base loading.jl:3142 [inlined]  [19] exec_options(opts::Base.JLOptions)  @ Base client.jl:353  [20] _start()  @ Base client.jl:596 in expression starting at /home/pkgeval/.julia/packages/Kmers/SM8Rg/ext/RandomExt.jl:1 in expression starting at stdin:5 ✗ Kmers → RandomExt ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile. --trace-compile is enabled during profile collection. ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404:0 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430:0 ijl_task_get_next at /source/src/scheduler.c:524:34 wait at ./task.jl:1248:0 (pc: 107) wait_forever at ./task.jl:1170:0 (pc: 4) jfptr_wait_forever_0.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4345:23 [inlined] ijl_apply_generic at /source/src/gf.c:4583:12 jl_apply at /source/src/julia.h:2405:12 [inlined] start_task at /source/src/task.c:1276:19 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point. Disabling --trace-compile ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.14/Profile/src/Profile.jl:1361 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x0000765b41f24a60 Total snapshots: 336. Utilization: 0% ╎336 @Base/task.jl:1170 wait_forever() 335╎ 336 @Base/task.jl:1248 wait() [135] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/precompile.jl:34 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404:0 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430:0 ijl_task_get_next at /source/src/scheduler.c:524:34 wait at ./task.jl:1248:0 (pc: 107) wait_forever at ./task.jl:1170:0 (pc: 4) jfptr_wait_forever_0.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4345:23 [inlined] ijl_apply_generic at /source/src/gf.c:4583:12 jl_apply at /source/src/julia.h:2405:12 [inlined] start_task at /source/src/task.c:1276:19 unknown function (ip: (nil)) at (unknown file) Allocations: 13120217 (Pool: 13119557; Big: 660); GC: 14 val already in a list atexit hook threw an error: ErrorException("schedule: Task not runnable") error at ./error.jl:56:0 (pc: 6) #schedule#625 at ./task.jl:1053:0 (pc: 71) schedule at ./task.jl:1045:0 [inlined] uv_writecb_task at ./stream.jl:1198:0 (pc: 11) jlcapi_uv_writecb_task_512.1 at /opt/julia/lib/julia/sys.so (unknown line) uv__write_callbacks at /workspace/srcdir/libuv/src/unix/stream.c:926:0 uv__stream_io at /workspace/srcdir/libuv/src/unix/stream.c:1227:0 uv__run_pending at /workspace/srcdir/libuv/src/unix/core.c:824:0 uv_run at /workspace/srcdir/libuv/src/unix/core.c:420:0 ijl_process_events at /source/src/jl_uv.c:397:21 process_events at ./libuv.jl:133:0 [inlined] wait at ./task.jl:1235:0 (pc: 15) PkgEval terminated after 2730.77s: test duration exceeded the time limit