Package evaluation of ThinPlateSplines on Julia 1.13.0-DEV.1189 (111bc9af8b*) started at 2025-09-22T12:39:49.408 ################################################################################ # Set-up # Set-up completed after 0.19s ################################################################################ # Installation # Installing ThinPlateSplines... Resolving package versions... Updating `~/.julia/environments/v1.13/Project.toml` [1d861738] + ThinPlateSplines v0.1.0 Updating `~/.julia/environments/v1.13/Manifest.toml` [b552c78f] + DiffRules v1.15.1 [ffbed154] + DocStringExtensions v0.9.5 [92d709cd] + IrrationalConstants v0.2.4 [692b3bcd] + JLLWrappers v1.7.1 [2ab3a3ac] + LogExpFunctions v0.3.29 [77ba4419] + NaNMath v1.1.3 [21216c6a] + Preferences v1.5.0 [ae029012] + Requires v1.3.1 [276daf66] + SpecialFunctions v2.5.1 [1d861738] + ThinPlateSplines v0.1.0 [bc48ee85] + Tullio v0.3.8 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [8e850b90] + libblastrampoline_jll v5.13.1+0 Installation completed after 7.24s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Project No packages added to or removed from `~/.julia/environments/pkgeval/Project.toml` Manifest No packages added to or removed from `~/.julia/environments/pkgeval/Manifest.toml` Precompiling package dependencies... Precompiling packages... ✗ Tullio ✗ ThinPlateSplines 0 dependencies successfully precompiled in 27 seconds. 24 already precompiled. ERROR: LoadError: The following 1 direct dependency failed to precompile: ThinPlateSplines Failed to precompile ThinPlateSplines [1d861738-f48e-4029-b1d3-81ce6bc7f5ab] to "/home/pkgeval/.julia/compiled/v1.13/ThinPlateSplines/jl_6YzF1O" (ProcessExited(1)). ERROR: LoadError: UndefVarError: `_shrink` not defined in `Base` Suggestion: check for spelling errors or missing imports. Stacktrace: [1] getproperty @ ./Base_compiler.jl:50 [inlined] [2] _precompile_() @ Tullio._Precompile_Base ~/.julia/packages/Tullio/2zyFP/src/precompile/precompile_Base.jl:77 [3] top-level scope @ ~/.julia/packages/Tullio/2zyFP/src/precompile.jl:14 [4] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [5] top-level scope @ ~/.julia/packages/Tullio/2zyFP/src/Tullio.jl:27 [6] include(mod::Module, _path::String) @ Base ./Base.jl:309 [7] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3069 [8] top-level scope @ stdin:5 [9] eval(m::Module, e::Any) @ Core ./boot.jl:489 [10] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2915 [11] include_string @ ./loading.jl:2925 [inlined] [12] exec_options(opts::Base.JLOptions) @ Base ./client.jl:328 [13] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/Tullio/2zyFP/src/precompile.jl:13 in expression starting at /home/pkgeval/.julia/packages/Tullio/2zyFP/src/Tullio.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile Tullio [bc48ee85-29a4-5162-ae0b-a64e1601d4bc] to "/home/pkgeval/.julia/compiled/v1.13/Tullio/jl_jOyHWy" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3356 [3] kwcall(::@NamedTuple{reasons::Dict{String, Int64}, loadable_exts::Nothing}, ::typeof(Base.compilecache), pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool) @ Base ./loading.jl:3234 [4] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}})() @ Base ./loading.jl:2698 [5] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94 [6] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined] [7] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115 [8] #invokelatest_gr#234 @ ./reflection.jl:1335 [inlined] [9] invokelatest_gr @ ./reflection.jl:1327 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3927 [11] maybe_cachefile_lock @ ./loading.jl:3924 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2684 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2512 [14] macro expansion @ ./loading.jl:2440 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2404 [17] require @ ./loading.jl:2380 [inlined] [18] eval_import_path @ ./module.jl:36 [inlined] [19] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [20] _eval_using(to::Module, path::Expr) @ Base ./module.jl:137 [21] top-level scope @ ~/.julia/packages/ThinPlateSplines/o54S1/src/ThinPlateSplines.jl:4 [22] include(mod::Module, _path::String) @ Base ./Base.jl:309 [23] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3069 [24] top-level scope @ stdin:5 [25] eval(m::Module, e::Any) @ Core ./boot.jl:489 [26] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2915 [27] include_string @ ./loading.jl:2925 [inlined] [28] exec_options(opts::Base.JLOptions) @ Base ./client.jl:328 [29] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/ThinPlateSplines/o54S1/src/ThinPlateSplines.jl:1 in expression starting at stdin: in expression starting at /PkgEval.jl/scripts/precompile.jl:37 Precompilation failed after 37.83s ################################################################################ # Loading # Loading ThinPlateSplines... Precompiling packages... ✗ Tullio Info Given ThinPlateSplines was explicitly requested, output will be shown live  ERROR: LoadError: UndefVarError: `_shrink` not defined in `Base` Suggestion: check for spelling errors or missing imports. Stacktrace:  [1] getproperty  @ ./Base_compiler.jl:50 [inlined]  [2] _precompile_()  @ Tullio._Precompile_Base ~/.julia/packages/Tullio/2zyFP/src/precompile/precompile_Base.jl:77  [3] top-level scope  @ ~/.julia/packages/Tullio/2zyFP/src/precompile.jl:14  [4] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:310  [5] top-level scope  @ ~/.julia/packages/Tullio/2zyFP/src/Tullio.jl:27  [6] include(mod::Module, _path::String)  @ Base ./Base.jl:309  [7] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String)  @ Base ./loading.jl:3069  [8] top-level scope  @ stdin:5  [9] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [10] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:2915  [11] include_string  @ ./loading.jl:2925 [inlined]  [12] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:328  [13] _start()  @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/Tullio/2zyFP/src/precompile.jl:13 in expression starting at /home/pkgeval/.julia/packages/Tullio/2zyFP/src/Tullio.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile Tullio [bc48ee85-29a4-5162-ae0b-a64e1601d4bc] to "/home/pkgeval/.julia/compiled/v1.13/Tullio/jl_hdQN3I" (ProcessExited(1)). Stacktrace:  [1] error(s::String)  @ Base ./error.jl:44  [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing)  @ Base ./loading.jl:3356  [3] kwcall(::@NamedTuple{reasons::Dict{String, Int64}, loadable_exts::Nothing}, ::typeof(Base.compilecache), pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool)  @ Base ./loading.jl:3234  [4] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}})()  @ Base ./loading.jl:2698  [5] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool})  @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94  [6] #mkpidlock#7  @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined]  [7] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64})  @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115  [8] #invokelatest_gr#234  @ ./reflection.jl:1335 [inlined]  [9] invokelatest_gr  @ ./reflection.jl:1327 [inlined]  [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)  @ Base ./loading.jl:3927  [11] maybe_cachefile_lock  @ ./loading.jl:3924 [inlined]  [12] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2684  [13] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2512  [14] macro expansion  @ ./loading.jl:2440 [inlined]  [15] macro expansion  @ ./lock.jl:376 [inlined]  [16] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2404  [17] require  @ ./loading.jl:2380 [inlined]  [18] eval_import_path  @ ./module.jl:36 [inlined]  [19] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base ./module.jl:60  [20] _eval_using(to::Module, path::Expr)  @ Base ./module.jl:137  [21] top-level scope  @ ~/.julia/packages/ThinPlateSplines/o54S1/src/ThinPlateSplines.jl:4  [22] include(mod::Module, _path::String)  @ Base ./Base.jl:309  [23] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3069  [24] top-level scope  @ stdin:5  [25] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [26] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:2915  [27] include_string  @ ./loading.jl:2925 [inlined]  [28] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:328  [29] _start()  @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/ThinPlateSplines/o54S1/src/ThinPlateSplines.jl:1 in expression starting at stdin:5 ✗ ThinPlateSplines 0 dependencies successfully precompiled in 24 seconds. 24 already precompiled. ERROR: The following 1 direct dependency failed to precompile: ThinPlateSplines Failed to precompile ThinPlateSplines [1d861738-f48e-4029-b1d3-81ce6bc7f5ab] to "/home/pkgeval/.julia/compiled/v1.13/ThinPlateSplines/jl_WOwzog" (ProcessExited(1)). ERROR: LoadError: UndefVarError: `_shrink` not defined in `Base` Suggestion: check for spelling errors or missing imports. Stacktrace: [1] getproperty @ ./Base_compiler.jl:50 [inlined] [2] _precompile_() @ Tullio._Precompile_Base ~/.julia/packages/Tullio/2zyFP/src/precompile/precompile_Base.jl:77 [3] top-level scope @ ~/.julia/packages/Tullio/2zyFP/src/precompile.jl:14 [4] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [5] top-level scope @ ~/.julia/packages/Tullio/2zyFP/src/Tullio.jl:27 [6] include(mod::Module, _path::String) @ Base ./Base.jl:309 [7] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3069 [8] top-level scope @ stdin:5 [9] eval(m::Module, e::Any) @ Core ./boot.jl:489 [10] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2915 [11] include_string @ ./loading.jl:2925 [inlined] [12] exec_options(opts::Base.JLOptions) @ Base ./client.jl:328 [13] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/Tullio/2zyFP/src/precompile.jl:13 in expression starting at /home/pkgeval/.julia/packages/Tullio/2zyFP/src/Tullio.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile Tullio [bc48ee85-29a4-5162-ae0b-a64e1601d4bc] to "/home/pkgeval/.julia/compiled/v1.13/Tullio/jl_hdQN3I" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3356 [3] kwcall(::@NamedTuple{reasons::Dict{String, Int64}, loadable_exts::Nothing}, ::typeof(Base.compilecache), pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool) @ Base ./loading.jl:3234 [4] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}})() @ Base ./loading.jl:2698 [5] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94 [6] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined] [7] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115 [8] #invokelatest_gr#234 @ ./reflection.jl:1335 [inlined] [9] invokelatest_gr @ ./reflection.jl:1327 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3927 [11] maybe_cachefile_lock @ ./loading.jl:3924 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2684 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2512 [14] macro expansion @ ./loading.jl:2440 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2404 [17] require @ ./loading.jl:2380 [inlined] [18] eval_import_path @ ./module.jl:36 [inlined] [19] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [20] _eval_using(to::Module, path::Expr) @ Base ./module.jl:137 [21] top-level scope @ ~/.julia/packages/ThinPlateSplines/o54S1/src/ThinPlateSplines.jl:4 [22] include(mod::Module, _path::String) @ Base ./Base.jl:309 [23] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3069 [24] top-level scope @ stdin:5 [25] eval(m::Module, e::Any) @ Core ./boot.jl:489 [26] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2915 [27] include_string @ ./loading.jl:2925 [inlined] [28] exec_options(opts::Base.JLOptions) @ Base ./client.jl:328 [29] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/ThinPlateSplines/o54S1/src/ThinPlateSplines.jl:1 in expression starting at stdin: Loading failed after 26.02s ERROR: LoadError: failed process: Process(`/opt/julia/bin/julia -C native -J/opt/julia/lib/julia/sys.so -g1 --check-bounds=yes --inline=yes --pkgimages=existing -e 'using ThinPlateSplines'`, ProcessExited(1)) [1] Stacktrace: [1] pipeline_error @ ./process.jl:611 [inlined] [2] run(::Cmd; wait::Bool) @ Base ./process.jl:526 [3] run(::Cmd) @ Base ./process.jl:523 [4] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:193 [5] include(mod::Module, _path::String) @ Base ./Base.jl:309 [6] exec_options(opts::Base.JLOptions) @ Base ./client.jl:330 [7] _start() @ Base ./client.jl:563 in expression starting at /PkgEval.jl/scripts/evaluate.jl:184 PkgEval failed after 86.81s: package fails to precompile