Package evaluation to test PencilArrays on Julia 1.12.4 (0f21d93eaa*) started at 2026-01-27T05:09:10.672 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.12` Set-up completed after 7.93s ################################################################################ # Installation # Installing PencilArrays... Resolving package versions... Updating `~/.julia/environments/v1.12/Project.toml` [0e08944d] + PencilArrays v0.19.8 Updating `~/.julia/environments/v1.12/Manifest.toml` [79e6a3ab] + Adapt v4.4.0 [4fba245c] + ArrayInterface v7.22.0 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.18.1 [ffbed154] + DocStringExtensions v0.9.5 [e2ba6199] + ExprTools v0.1.10 [615f187c] + IfElse v0.1.1 [692b3bcd] + JLLWrappers v1.7.1 [0f8b85d8] + JSON3 v1.14.3 [da04e1cc] + MPI v0.20.23 [3da0fdf6] + MPIPreferences v0.1.11 [6fe1bfb0] + OffsetArrays v1.17.0 [65ce6f38] + PackageExtensionCompat v1.0.2 [69de0a69] + Parsers v2.8.3 [0e08944d] + PencilArrays v0.19.8 [eebad327] + PkgVersion v0.3.3 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.1 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [431bcebd] + SciMLPublic v1.0.1 [aedffcd0] + Static v1.3.1 [0d7ed370] + StaticArrayInterface v1.8.0 [90137ffa] + StaticArrays v1.9.16 [1e83bf80] + StaticArraysCore v1.4.4 [15972242] + StaticPermutations v0.3.0 [5e0ebb24] + Strided v2.3.2 [4db3bf67] + StridedViews v0.4.3 [856f2bd8] + StructTypes v1.11.0 [a759f4b9] + TimerOutputs v0.5.29 [9d95972d] + TupleTools v1.6.0 [81def892] + VersionParsing v1.3.0 [e33a78d0] + Hwloc_jll v2.12.2+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [7cb0a576] + MPICH_jll v4.3.2+0 [f1f71cc9] + MPItrampoline_jll v5.5.4+0 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 [fe0851c0] + OpenMPI_jll v5.0.9+0 ⌅ [02c8fc9c] + XML2_jll v2.13.9+0 [a65dc6b1] + Xorg_libpciaccess_jll v0.18.1+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.12.1 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.15.0+0 [e37daf67] + LibGit2_jll v1.9.0+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.11.4 [4536629a] + OpenBLAS_jll v0.3.29+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.64.0+1 [3f19e933] + p7zip_jll v17.7.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 8.51s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompiling packages... 2839.4 ms ✓ DifferentiationInterface → DifferentiationInterfaceGPUArraysCoreExt 5775.6 ms ✓ DifferentiationInterface → DifferentiationInterfaceFiniteDiffExt 44213.2 ms ✓ ExponentialUtilities 1939.5 ms ✓ DifferentiationInterface → DifferentiationInterfaceStaticArraysExt 1720.7 ms ✓ DifferentiationInterface → DifferentiationInterfaceSparseMatrixColoringsExt 45861.0 ms ✓ SciMLBase 4336.8 ms ✓ DifferentiationInterface → DifferentiationInterfaceForwardDiffExt 1989.8 ms ✓ RecursiveArrayTools → RecursiveArrayToolsForwardDiffExt 11497.7 ms ✓ PencilArrays 2642.3 ms ✓ RecursiveArrayTools → RecursiveArrayToolsFastBroadcastExt 4310.2 ms ✓ NLSolversBase 49797.3 ms ✓ ExponentialUtilities → ExponentialUtilitiesStaticArraysExt 4039.3 ms ✓ SciMLBase → SciMLBaseChainRulesCoreExt 3987.1 ms ✓ SciMLBase → SciMLBaseDifferentiationInterfaceExt 7029.2 ms ✓ SciMLBase → SciMLBaseForwardDiffExt 22214.2 ms ✓ PencilArrays → PencilArraysHDF5Ext 60651.0 ms ✓ DiffEqBase 4513.3 ms ✓ LineSearches 93474.0 ms ✓ LinearSolve 16971.1 ms ✓ SciMLJacobianOperators 22750.3 ms ✓ DiffEqBase → DiffEqBaseChainRulesCoreExt 8456.3 ms ✓ DiffEqBase → DiffEqBaseMPIExt 15911.8 ms ✓ DiffEqBase → DiffEqBaseForwardDiffExt 4995.8 ms ✓ DiffEqBase → DiffEqBaseSparseArraysExt 14633.9 ms ✓ OrdinaryDiffEqCore 78533.3 ms ✓ PencilArrays → PencilArraysDiffEqExt 108571.0 ms ✓ LinearSolve → LinearSolveForwardDiffExt 7072.2 ms ✓ LinearSolve → LinearSolveEnzymeExt 11294.9 ms ✓ LinearSolve → LinearSolveSparseArraysExt 74977.7 ms ✓ LineSearch 20542.5 ms ✓ NonlinearSolveBase 34499.6 ms ✓ OrdinaryDiffEqCore → OrdinaryDiffEqCoreEnzymeCoreExt 4778.3 ms ✓ LineSearch → LineSearchLineSearchesExt 4722.0 ms ✓ NonlinearSolveBase → NonlinearSolveBaseSparseMatrixColoringsExt 102934.8 ms ✓ NonlinearSolveBase → NonlinearSolveBaseForwardDiffExt 4805.1 ms ✓ NonlinearSolveBase → NonlinearSolveBaseSparseArraysExt 18910.4 ms ✓ NonlinearSolveBase → NonlinearSolveBaseLineSearchExt 136031.5 ms ✓ NonlinearSolveBase → NonlinearSolveBaseLinearSolveExt 4212.0 ms ✓ NonlinearSolveBase → NonlinearSolveBaseChainRulesCoreExt 10713.6 ms ✓ BracketingNonlinearSolve 40968.7 ms ✓ OrdinaryDiffEqExplicitRK 8783.6 ms ✓ OrdinaryDiffEqHighOrderRK 9443.3 ms ✓ OrdinaryDiffEqStabilizedRK 8192.8 ms ✓ OrdinaryDiffEqSymplecticRK 10230.3 ms ✓ OrdinaryDiffEqSSPRK 11231.9 ms ✓ OrdinaryDiffEqLowOrderRK 6800.3 ms ✓ OrdinaryDiffEqFunctionMap 15201.9 ms ✓ OrdinaryDiffEqLinear 17316.3 ms ✓ OrdinaryDiffEqTsit5 73412.8 ms ✓ OrdinaryDiffEqVerner 8621.1 ms ✓ OrdinaryDiffEqPRK 8718.0 ms ✓ OrdinaryDiffEqRKN 8494.4 ms ✓ OrdinaryDiffEqFeagin 7843.1 ms ✓ OrdinaryDiffEqQPRK 10886.8 ms ✓ OrdinaryDiffEqLowStorageRK 244371.5 ms ✓ OrdinaryDiffEqDifferentiation 140615.0 ms ✓ NonlinearSolveSpectralMethods 194560.0 ms ✓ NonlinearSolveQuasiNewton 97758.1 ms ✓ NonlinearSolveFirstOrder 17297.8 ms ✓ BracketingNonlinearSolve → BracketingNonlinearSolveForwardDiffExt 50198.0 ms ✓ OrdinaryDiffEqAdamsBashforthMoulton 24478.9 ms ✓ OrdinaryDiffEqNordsieck 56125.7 ms ✓ OrdinaryDiffEqExponentialRK 16269.8 ms ✓ OrdinaryDiffEqExtrapolation 52007.7 ms ✓ OrdinaryDiffEqRosenbrock 25325.2 ms ✓ NonlinearSolveSpectralMethods → NonlinearSolveSpectralMethodsForwardDiffExt 8631.8 ms ✓ NonlinearSolveQuasiNewton → NonlinearSolveQuasiNewtonForwardDiffExt 4928.1 ms ✓ BracketingNonlinearSolve → BracketingNonlinearSolveChainRulesCoreExt 22345.8 ms ✓ SimpleNonlinearSolve 6115.3 ms ✓ SimpleNonlinearSolve → SimpleNonlinearSolveDiffEqBaseExt 6027.5 ms ✓ SimpleNonlinearSolve → SimpleNonlinearSolveChainRulesCoreExt 43590.6 ms ✓ NonlinearSolve 23081.7 ms ✓ OrdinaryDiffEqNonlinearSolve 24101.2 ms ✓ OrdinaryDiffEqStabilizedIRK 18974.3 ms ✓ OrdinaryDiffEqSDIRK 16028.7 ms ✓ OrdinaryDiffEqIMEXMultistep 17727.1 ms ✓ OrdinaryDiffEqPDIRK 61332.8 ms ✓ OrdinaryDiffEqFIRK 37623.3 ms ✓ OrdinaryDiffEqBDF ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 31 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 poptask at ./task.jl:1216 wait at ./task.jl:1228 #wait#398 at ./condition.jl:141 _trywait at ./asyncevent.jl:163 #634 at ./asyncevent.jl:359 jfptr_YY.634_17279.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 jl_apply at /source/src/julia.h:2391 [inlined] start_task at /source/src/task.c:1252 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.12/Profile/src/Profile.jl:1361 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x00007d69e2f31780 Total snapshots: 407. Utilization: 0% ╎407 @Base/asyncevent.jl:359 (::Base.var"#634#635"{FileWatching.Pidfile.var… ╎ 407 @Base/asyncevent.jl:163 _trywait(t::Timer) ╎ 407 @Base/condition.jl:141 wait(c::Base.GenericCondition{Base.Threads.Sp… ╎ 407 @Base/task.jl:1228 wait() 406╎ 407 @Base/task.jl:1216 poptask(W::Base.IntrusiveLinkedListSynchronized… 159774.8 ms ✓ OrdinaryDiffEqDefault ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 poptask at ./task.jl:1216 wait at ./task.jl:1228 task_done_hook at ./task.jl:868 jfptr_task_done_hook_59255.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 jl_apply at /source/src/julia.h:2391 [inlined] jl_finish_task at /source/src/task.c:341 start_task at /source/src/task.c:1263 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.12/Profile/src/Profile.jl:1361 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x00007e2501fb55a0 Total snapshots: 411. Utilization: 0% ╎411 @Base/task.jl:868 task_done_hook(t::Task) ╎ 411 @Base/task.jl:1228 wait() 410╎ 411 @Base/task.jl:1216 poptask(W::Base.IntrusiveLinkedListSynchronized{T… [31] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/precompile.jl:34 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 poptask at ./task.jl:1216 wait at ./task.jl:1228 #wait#398 at ./condition.jl:141 _trywait at ./asyncevent.jl:163 #634 at ./asyncevent.jl:359 jfptr_YY.634_17279.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 jl_apply at /source/src/julia.h:2391 [inlined] start_task at /source/src/task.c:1252 unknown function (ip: (nil)) at (unknown file) Allocations: 22550650 (Pool: 22549790; Big: 860); GC: 21 PkgEval terminated after 2821.7s: test duration exceeded the time limit