Package evaluation to test OMOPCommonDataModel on Julia 1.12.4 (0f21d93eaa*) started at 2026-01-26T16:33:34.040 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.12` Set-up completed after 8.0s ################################################################################ # Installation # Installing OMOPCommonDataModel... Resolving package versions... Updating `~/.julia/environments/v1.12/Project.toml` [ba65db9e] + OMOPCommonDataModel v0.1.4 Updating `~/.julia/environments/v1.12/Manifest.toml` ⌅ [ffbed154] + DocStringExtensions v0.8.6 [ba65db9e] + OMOPCommonDataModel v0.1.4 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.12.1 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.15.0+0 [e37daf67] + LibGit2_jll v1.9.0+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.11.4 [458c3c95] + OpenSSL_jll v3.5.4+0 [83775a58] + Zlib_jll v1.3.1+2 [8e850ede] + nghttp2_jll v1.64.0+1 [3f19e933] + p7zip_jll v17.7.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 1.31s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... ┌ Warning: Could not use exact versions of packages in manifest, re-resolving └ @ TestEnv ~/.julia/packages/TestEnv/h9a3r/src/julia-1.12/activate_set.jl:78 ┌ Error: Failed to use TestEnv.jl; test dependencies will not be precompiled │ exception = │ Unsatisfiable requirements detected for package SortingAlgorithms [a2af1166]: │ SortingAlgorithms [a2af1166] log: │ ├─possible versions are: 0.3.0 - 1.2.2 or uninstalled │ ├─restricted by compatibility requirements with DataFrames [a93c6f00] to versions: 0.3.0 - 0.3.2 │ │ └─DataFrames [a93c6f00] log: │ │ ├─possible versions are: 0.11.7 - 1.8.1 or uninstalled │ │ └─restricted to versions 0.21 by project [57a2b97f], leaving only versions: 0.21.0 - 0.21.8 │ │ └─project [57a2b97f] log: │ │ ├─possible versions are: 0.0.0 or uninstalled │ │ └─project [57a2b97f] is fixed to version 0.0.0 │ └─restricted by julia compatibility requirements to versions: 1.1.0 - 1.2.2 or uninstalled — no versions left │ Stacktrace: │ [1] propagate_constraints!(graph::Pkg.Resolve.Graph, sources::Set{Int64}; log_events::Bool, err_msg_preamble::String) │ @ Pkg.Resolve /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Resolve/graphtype.jl:1150 │ [2] simplify_graph!(graph::Pkg.Resolve.Graph, sources::Set{Int64}; validate_versions::Bool) │ @ Pkg.Resolve /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Resolve/graphtype.jl:1650 │ [3] resolve_versions!(env::Pkg.Types.EnvCache, registries::Vector{Pkg.Registry.RegistryInstance}, pkgs::Vector{PackageSpec}, julia_version::VersionNumber, installed_only::Bool) │ @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:493 │ [4] up(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}, level::UpgradeLevel; skip_writing_project::Bool, preserve::Nothing) │ @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:1997 │ [5] up │ @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:1974 [inlined] │ [6] up(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; level::UpgradeLevel, mode::PackageMode, preserve::Nothing, update_registry::Bool, skip_writing_project::Bool, kwargs::@Kwargs{io::Base.DevNull}) │ @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:436 │ [7] up │ @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:406 [inlined] │ [8] up │ @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:174 [inlined] │ [9] #resolve#167 │ @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:442 [inlined] │ [10] resolve │ @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:441 [inlined] │ [11] activate(pkg::String; allow_reresolve::Bool) │ @ TestEnv ~/.julia/packages/TestEnv/h9a3r/src/julia-1.12/activate_set.jl:83 │ [12] activate(pkg::String) │ @ TestEnv ~/.julia/packages/TestEnv/h9a3r/src/julia-1.12/activate_set.jl:9 │ [13] (::var"#10#11")() │ @ Main /PkgEval.jl/scripts/precompile.jl:21 │ [14] capture_pkg_output(f::var"#10#11"; suppress::Bool) │ @ Main /PkgEval.jl/scripts/common.jl:55 │ [15] suppress_pkg_output(f::Function) │ @ Main /PkgEval.jl/scripts/common.jl:35 │ [16] top-level scope │ @ /PkgEval.jl/scripts/precompile.jl:19 │ [17] include(mod::Module, _path::String) │ @ Base ./Base.jl:306 │ [18] exec_options(opts::Base.JLOptions) │ @ Base ./client.jl:317 │ [19] _start() │ @ Base ./client.jl:550 └ @ Main /PkgEval.jl/scripts/precompile.jl:24 Activating project at `~/.julia/environments/v1.12` Precompiling package dependencies... Precompiling packages... 5583.4 ms ✓ OMOPCommonDataModel 1 dependency successfully precompiled in 6 seconds. 27 already precompiled. Precompilation completed after 24.62s ################################################################################ # Testing # Testing OMOPCommonDataModel Test Could not use exact versions of packages in manifest. Re-resolving dependencies Testing failed after 8.13s ERROR: LoadError: Unsatisfiable requirements detected for package SortingAlgorithms [a2af1166]: SortingAlgorithms [a2af1166] log: ├─possible versions are: 0.3.0 - 1.2.2 or uninstalled ├─restricted by compatibility requirements with DataFrames [a93c6f00] to versions: 0.3.0 - 0.3.2 │ └─DataFrames [a93c6f00] log: │ ├─possible versions are: 0.11.7 - 1.8.1 or uninstalled │ └─restricted to versions 0.21 by project [50324481], leaving only versions: 0.21.0 - 0.21.8 │ └─project [50324481] log: │ ├─possible versions are: 0.0.0 or uninstalled │ └─project [50324481] is fixed to version 0.0.0 └─restricted by julia compatibility requirements to versions: 1.1.0 - 1.2.2 or uninstalled — no versions left Stacktrace: [1] propagate_constraints!(graph::Pkg.Resolve.Graph, sources::Set{Int64}; log_events::Bool, err_msg_preamble::String) @ Pkg.Resolve /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Resolve/graphtype.jl:1150 [2] simplify_graph!(graph::Pkg.Resolve.Graph, sources::Set{Int64}; validate_versions::Bool) @ Pkg.Resolve /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Resolve/graphtype.jl:1650 [3] resolve_versions!(env::Pkg.Types.EnvCache, registries::Vector{Pkg.Registry.RegistryInstance}, pkgs::Vector{PackageSpec}, julia_version::VersionNumber, installed_only::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:493 [4] up(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}, level::UpgradeLevel; skip_writing_project::Bool, preserve::Nothing) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:1997 [5] up @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:1974 [inlined] [6] up(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; level::UpgradeLevel, mode::PackageMode, preserve::Nothing, update_registry::Bool, skip_writing_project::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:436 [7] (::Pkg.Operations.var"#190#191"{String, Pkg.Types.EnvCache, Bool, Bool, Bool, Pkg.Operations.var"#205#206"{Bool, Cmd, Cmd, Nothing, Pkg.Types.Context, Vector{Tuple{String, Base.Process}}, String, PackageSpec}, Pkg.Types.Context, PackageSpec})() @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2298 [8] with_temp_env(fn::Pkg.Operations.var"#190#191"{String, Pkg.Types.EnvCache, Bool, Bool, Bool, Pkg.Operations.var"#205#206"{Bool, Cmd, Cmd, Nothing, Pkg.Types.Context, Vector{Tuple{String, Base.Process}}, String, PackageSpec}, Pkg.Types.Context, PackageSpec}, temp_env::String) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2161 [9] (::Pkg.Operations.var"#186#187"{Dict{String, Any}, Bool, Bool, Bool, Pkg.Operations.var"#205#206"{Bool, Cmd, Cmd, Nothing, Pkg.Types.Context, Vector{Tuple{String, Base.Process}}, String, PackageSpec}, Pkg.Types.Context, PackageSpec, String, String})(tmp::String) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2275 [10] mktempdir(fn::Pkg.Operations.var"#186#187"{Dict{String, Any}, Bool, Bool, Bool, Pkg.Operations.var"#205#206"{Bool, Cmd, Cmd, Nothing, Pkg.Types.Context, Vector{Tuple{String, Base.Process}}, String, PackageSpec}, Pkg.Types.Context, PackageSpec, String, String}, parent::String; prefix::String) @ Base.Filesystem ./file.jl:936 [11] mktempdir(fn::Function, parent::String) @ Base.Filesystem ./file.jl:932 [12] #sandbox#182 @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2222 [inlined] [13] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2478 [14] test @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2384 [inlined] [15] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:538 [16] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:169 [17] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:157 [18] test @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:157 [inlined] [19] #test#81 @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:156 [inlined] [20] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:223 [21] include(mod::Module, _path::String) @ Base ./Base.jl:306 [22] exec_options(opts::Base.JLOptions) @ Base ./client.jl:317 [23] _start() @ Base ./client.jl:550 in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 caused by: Unsatisfiable requirements detected for package SortingAlgorithms [a2af1166]: SortingAlgorithms [a2af1166] log: ├─possible versions are: 0.3.0 - 1.2.2 or uninstalled ├─restricted by compatibility requirements with DataFrames [a93c6f00] to versions: 0.3.0 - 0.3.2 │ └─DataFrames [a93c6f00] log: │ ├─possible versions are: 0.11.7 - 1.8.1 or uninstalled │ └─restricted to versions 0.21 by project [50324481], leaving only versions: 0.21.0 - 0.21.8 │ └─project [50324481] log: │ ├─possible versions are: 0.0.0 or uninstalled │ └─project [50324481] is fixed to version 0.0.0 └─restricted by julia compatibility requirements to versions: 1.1.0 - 1.2.2 or uninstalled — no versions left Stacktrace: [1] propagate_constraints!(graph::Pkg.Resolve.Graph, sources::Set{Int64}; log_events::Bool, err_msg_preamble::String) @ Pkg.Resolve /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Resolve/graphtype.jl:1150 [2] simplify_graph!(graph::Pkg.Resolve.Graph, sources::Set{Int64}; validate_versions::Bool) @ Pkg.Resolve /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Resolve/graphtype.jl:1650 [3] resolve_versions!(env::Pkg.Types.EnvCache, registries::Vector{Pkg.Registry.RegistryInstance}, pkgs::Vector{PackageSpec}, julia_version::VersionNumber, installed_only::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:493 [4] up(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}, level::UpgradeLevel; skip_writing_project::Bool, preserve::Nothing) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:1997 [5] up @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:1974 [inlined] [6] up(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; level::UpgradeLevel, mode::PackageMode, preserve::Nothing, update_registry::Bool, skip_writing_project::Bool, kwargs::@Kwargs{io::Base.DevNull}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:436 [7] up @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:406 [inlined] [8] up @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:174 [inlined] [9] #resolve#167 @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:442 [inlined] [10] resolve @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:441 [inlined] [11] (::Pkg.Operations.var"#190#191"{String, Pkg.Types.EnvCache, Bool, Bool, Bool, Pkg.Operations.var"#205#206"{Bool, Cmd, Cmd, Nothing, Pkg.Types.Context, Vector{Tuple{String, Base.Process}}, String, PackageSpec}, Pkg.Types.Context, PackageSpec})() @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2291 [12] with_temp_env(fn::Pkg.Operations.var"#190#191"{String, Pkg.Types.EnvCache, Bool, Bool, Bool, Pkg.Operations.var"#205#206"{Bool, Cmd, Cmd, Nothing, Pkg.Types.Context, Vector{Tuple{String, Base.Process}}, String, PackageSpec}, Pkg.Types.Context, PackageSpec}, temp_env::String) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2161 [13] (::Pkg.Operations.var"#186#187"{Dict{String, Any}, Bool, Bool, Bool, Pkg.Operations.var"#205#206"{Bool, Cmd, Cmd, Nothing, Pkg.Types.Context, Vector{Tuple{String, Base.Process}}, String, PackageSpec}, Pkg.Types.Context, PackageSpec, String, String})(tmp::String) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2275 [14] mktempdir(fn::Pkg.Operations.var"#186#187"{Dict{String, Any}, Bool, Bool, Bool, Pkg.Operations.var"#205#206"{Bool, Cmd, Cmd, Nothing, Pkg.Types.Context, Vector{Tuple{String, Base.Process}}, String, PackageSpec}, Pkg.Types.Context, PackageSpec, String, String}, parent::String; prefix::String) @ Base.Filesystem ./file.jl:936 [15] mktempdir(fn::Function, parent::String) @ Base.Filesystem ./file.jl:932 [16] #sandbox#182 @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2222 [inlined] [17] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2478 [18] test @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2384 [inlined] [19] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:538 [20] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:169 [21] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:157 [22] test @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:157 [inlined] [23] #test#81 @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:156 [inlined] [24] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:223 [25] include(mod::Module, _path::String) @ Base ./Base.jl:306 [26] exec_options(opts::Base.JLOptions) @ Base ./client.jl:317 [27] _start() @ Base ./client.jl:550 PkgEval failed after 57.46s: there were unidentified errors