Package evaluation to test Molly on Julia 1.12.4 (0f21d93eaa*) started at 2026-01-27T06:18:22.560 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.12` Set-up completed after 7.84s ################################################################################ # Installation # Installing Molly... Resolving package versions... Updating `~/.julia/environments/v1.12/Project.toml` [aa0f7f06] + Molly v0.23.1 Updating `~/.julia/environments/v1.12/Manifest.toml` [621f4979] + AbstractFFTs v1.5.0 [1520ce14] + AbstractTrees v0.4.5 [6a4ca0a5] + AcceleratedKernels v0.4.3 [79e6a3ab] + Adapt v4.4.0 [66dad0bd] + AliasTables v1.1.3 [dce04be8] + ArgCheck v2.5.0 [ec485272] + ArnoldiMethod v0.4.0 [a9b6321e] + Atomix v1.1.2 [a963bdd2] + AtomsBase v0.5.2 [a3e0e189] + AtomsCalculators v0.2.3 [47718e42] + BioGenerics v0.1.5 [de9282ab] + BioStructures v4.7.0 [3c28c6f8] + BioSymbols v5.2.0 [fa961155] + CEnum v0.5.0 [69e1c6dd] + CellListMap v0.9.15 [46823bd8] + Chemfiles v0.10.43 [ae650224] + ChunkSplitters v3.1.2 [944b1d66] + CodecZlib v0.7.8 [861a8166] + Combinatorics v1.1.0 [34da2185] + Compat v4.18.1 [187b0558] + ConstructionBase v1.6.0 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.19.3 [e2d170a0] + DataValueInterfaces v1.0.0 [b4f34e82] + Distances v0.10.12 [31c24e10] + Distributions v0.25.123 [ffbed154] + DocStringExtensions v0.9.5 [8f5d6c58] + EzXML v1.2.3 [7a1cc6ca] + FFTW v1.10.0 [1a297f60] + FillArrays v1.16.0 [1fa38f19] + Format v1.3.7 [0c68f7d7] + GPUArrays v11.3.4 [46192b85] + GPUArraysCore v0.2.0 [86223c79] + Graphs v1.13.4 [076d061b] + HashArrayMappedTries v0.2.0 [34004b35] + HypergeometricFunctions v0.3.28 [d25df0c9] + Inflate v0.1.5 [92d709cd] + IrrationalConstants v0.2.6 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 [63c18a36] + KernelAbstractions v0.9.39 [929cbde3] + LLVM v9.4.4 [2ab3a3ac] + LogExpFunctions v0.3.29 [1914dd2f] + MacroTools v0.5.16 [e1d29d7a] + Missings v1.2.0 [aa0f7f06] + Molly v0.23.1 [b8a86587] + NearestNeighbors v0.4.26 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.37 [d96e819e] + Parameters v0.12.3 [7b2266bf] + PeriodicTable v1.2.1 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.1 [92933f4c] + ProgressMeter v1.11.0 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [3cdcf5f2] + RecipesBase v1.3.4 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.9.0 [7e506255] + ScopedValues v1.5.0 [efcf1570] + Setfield v1.1.2 [64031d72] + SimpleCrystals v0.4.5 [699a6c99] + SimpleTraits v0.9.5 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.6.1 [90137ffa] + StaticArrays v1.9.16 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 [2913bbd2] + StatsBase v0.34.10 [4c63d2b9] + StatsFuns v1.5.2 [09ab397b] + StructArrays v0.7.2 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [1c621080] + TestItems v1.0.0 [3bb67fe8] + TranscodingStreams v0.11.3 [3a884ed6] + UnPack v1.0.2 [1986cc42] + Unitful v1.27.0 [a7773ee8] + UnitfulAtomic v1.0.0 [013be700] + UnsafeAtomics v0.3.0 [78a364fa] + Chemfiles_jll v0.10.4+0 [f5851436] + FFTW_jll v3.3.11+0 [1d5cc7b8] + IntelOpenMP_jll v2025.2.0+0 [dad2f222] + LLVMExtra_jll v0.0.38+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [856f044c] + MKL_jll v2025.2.0+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [02c8fc9c] + XML2_jll v2.15.1+0 [1317d2d5] + oneTBB_jll v2022.0.0+1 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.12.1 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.15.0+0 [e37daf67] + LibGit2_jll v1.9.0+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.11.4 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [bea87d4a] + SuiteSparse_jll v7.8.3+2 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.64.0+1 [3f19e933] + p7zip_jll v17.7.0+0 Installation completed after 7.08s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompiling packages... 6554.0 ms ✓ oneAPI_Support_jll 14198.8 ms ✓ BioStructures → BioStructuresDataFramesExt 12291.2 ms ✓ SPIRVIntrinsics 216949.1 ms ✓ Molly 23516.1 ms ✓ CUDA → ChainRulesCoreExt ✗ GLMakie 15002.9 ms ✓ SPIRVIntrinsics → SPIRVIntrinsicsSIMDExt 47868.3 ms ✓ oneAPI 201746.5 ms ✓ Molly → MollyEnzymeExt 43743.0 ms ✓ Molly → MollyKernelDensityExt 230063.1 ms ✓ Molly → MollyCUDAExt ✗ Molly → MollyGLMakieExt 9976.1 ms ✓ Atomix → AtomixoneAPIExt 10337.1 ms ✓ AcceleratedKernels → AcceleratedKernelsoneAPIExt 12 dependencies successfully precompiled in 2213 seconds. 421 already precompiled. 2 dependencies had output during precompilation: ┌ Molly → MollyCUDAExt │ WARNING: Constructor for type "Int" was extended in `CUDA` without explicit qualification or import. │ NOTE: Assumed "Int" refers to `Base.Int`. This behavior is deprecated and may differ in future versions.` │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Int end`. │ Hint: To silence the warning, qualify `Int` as `Base.Int` in the method signature or explicitly `import Base: Int`. │ WARNING: Constructor for type "UInt" was extended in `CUDA` without explicit qualification or import. │ NOTE: Assumed "UInt" refers to `Base.UInt`. This behavior is deprecated and may differ in future versions.` │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function UInt end`. │ Hint: To silence the warning, qualify `UInt` as `Base.UInt` in the method signature or explicitly `import Base: UInt`. │ WARNING: Constructor for type "BroadcastStyle" was extended in `CUDA` without explicit qualification or import. │ NOTE: Assumed "BroadcastStyle" refers to `Broadcast.BroadcastStyle`. This behavior is deprecated and may differ in future versions.` │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function BroadcastStyle end`. │ Hint: To silence the warning, qualify `BroadcastStyle` as `Broadcast.BroadcastStyle` in the method signature or explicitly `import Broadcast: BroadcastStyle`. │ WARNING: Constructor for type "CuArray" was extended in `CUBLAS` without explicit qualification or import. │ NOTE: Assumed "CuArray" refers to `CUDA.CuArray`. This behavior is deprecated and may differ in future versions.` │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function CuArray end`. │ Hint: To silence the warning, qualify `CuArray` as `CUDA.CuArray` in the method signature or explicitly `import CUDA: CuArray`. │ WARNING: Constructor for type "SparseVector" was extended in `CUSPARSE` without explicit qualification or import. │ NOTE: Assumed "SparseVector" refers to `SparseArrays.SparseVector`. This behavior is deprecated and may differ in future versions.` │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function SparseVector end`. │ Hint: To silence the warning, qualify `SparseVector` as `SparseArrays.SparseVector` in the method signature or explicitly `import SparseArrays: SparseVector`. │ WARNING: Constructor for type "SparseMatrixCSC" was extended in `CUSPARSE` without explicit qualification or import. │ NOTE: Assumed "SparseMatrixCSC" refers to `SparseArrays.SparseMatrixCSC`. This behavior is deprecated and may differ in future versions.` │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function SparseMatrixCSC end`. │ Hint: To silence the warning, qualify `SparseMatrixCSC` as `SparseArrays.SparseMatrixCSC` in the method signature or explicitly `import SparseArrays: SparseMatrixCSC`. │ WARNING: Constructor for type "CuVector" was extended in `CUSPARSE` without explicit qualification or import. │ NOTE: Assumed "CuVector" refers to `CUDA.CuVector`. This behavior is deprecated and may differ in future versions.` │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function CuVector end`. │ Hint: To silence the warning, qualify `CuVector` as `CUDA.CuVector` in the method signature or explicitly `import CUDA: CuVector`. │ WARNING: Constructor for type "CuMatrix" was extended in `CUSOLVER` without explicit qualification or import. │ NOTE: Assumed "CuMatrix" refers to `CUDA.CuMatrix`. This behavior is deprecated and may differ in future versions.` │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function CuMatrix end`. │ Hint: To silence the warning, qualify `CuMatrix` as `CUDA.CuMatrix` in the method signature or explicitly `import CUDA: CuMatrix`. │ WARNING: Constructor for type "CuArray" was extended in `CUSOLVER` without explicit qualification or import. │ NOTE: Assumed "CuArray" refers to `CUDA.CuArray`. This behavior is deprecated and may differ in future versions.` │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function CuArray end`. │ Hint: To silence the warning, qualify `CuArray` as `CUDA.CuArray` in the method signature or explicitly `import CUDA: CuArray`. └ ┌ Molly → MollyEnzymeExt │ ┌ Warning: Enzyme.jl support for Julia 1.12 is presently in progress. │ │ For the time being we recommend using 1.11 or LTS (1.10). │ │ │ │ For latest updates, check the status of support for Julia 1.12+ at │ │ https://github.com/EnzymeAD/Enzyme.jl/issues/2699. │ │ │ └ @ Enzyme ~/.julia/packages/Enzyme/jaHZG/src/Enzyme.jl:1587 └ ERROR: LoadError: The following 2 direct dependencies failed to precompile: Molly → MollyGLMakieExt Failed to precompile MollyGLMakieExt [6556c0c0-e20d-5134-b211-15c1ed70d292] to "/home/pkgeval/.julia/compiled/v1.12/MollyGLMakieExt/jl_Y4Mryb". ┌ Warning: GLFW couldn't create an OpenGL window. │ This likely means, you don't have an OpenGL capable Graphic Card, │ or you don't have an OpenGL 3.3 capable video driver installed. │ Have a look at the troubleshooting section in the GLMakie readme: │ https://github.com/MakieOrg/Makie.jl/tree/master/GLMakie#troubleshooting-opengl. └ @ GLMakie ~/.julia/packages/GLMakie/vdrwE/src/screen.jl:293 ERROR: LoadError: GLFWError (API_UNAVAILABLE): GLX: No GLXFBConfigs returned Stacktrace: [1] _ErrorCallbackWrapper(code::Int32, description::Cstring) @ GLFW ~/.julia/packages/GLFW/wA4ue/src/callback.jl:46 [2] CreateWindow(width::Int64, height::Int64, title::String, monitor::GLFW.Monitor, share::GLFW.Window) @ GLFW ~/.julia/packages/GLFW/wA4ue/src/glfw3.jl:600 [3] GLFW.Window(; name::String, resolution::Tuple{Int64, Int64}, debugging::Bool, major::Int64, minor::Int64, windowhints::Vector{Tuple{UInt32, Integer}}, contexthints::Vector{Tuple{UInt32, Integer}}, visible::Bool, focus::Bool, fullscreen::Bool, monitor::Nothing, share::GLFW.Window) @ GLFW ~/.julia/packages/GLFW/wA4ue/src/glfw3.jl:404 [4] Window @ ~/.julia/packages/GLFW/wA4ue/src/glfw3.jl:362 [inlined] [5] empty_screen(debugging::Bool, reuse::Bool, window::Nothing) @ GLMakie ~/.julia/packages/GLMakie/vdrwE/src/screen.jl:284 [6] empty_screen(debugging::Bool; reuse::Bool, window::Nothing) @ GLMakie ~/.julia/packages/GLMakie/vdrwE/src/screen.jl:258 [7] singleton_screen(debugging::Bool) @ GLMakie ~/.julia/packages/GLMakie/vdrwE/src/screen.jl:395 [8] macro expansion @ ~/.julia/packages/GLMakie/vdrwE/src/precompiles.jl:20 [inlined] [9] macro expansion @ ~/.julia/packages/PrecompileTools/gn08A/src/workloads.jl:73 [inlined] [10] macro expansion @ ~/.julia/packages/GLMakie/vdrwE/src/precompiles.jl:17 [inlined] [11] macro expansion @ ~/.julia/packages/PrecompileTools/gn08A/src/workloads.jl:121 [inlined] [12] top-level scope @ ~/.julia/packages/GLMakie/vdrwE/src/precompiles.jl:15 [13] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:307 [14] top-level scope @ ~/.julia/packages/GLMakie/vdrwE/src/GLMakie.jl:103 [15] include(mod::Module, _path::String) @ Base ./Base.jl:306 [16] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3024 [17] top-level scope @ stdin:5 [18] eval(m::Module, e::Any) @ Core ./boot.jl:489 [19] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2870 [20] include_string @ ./loading.jl:2880 [inlined] [21] exec_options(opts::Base.JLOptions) @ Base ./client.jl:315 [22] _start() @ Base ./client.jl:550 in expression starting at /home/pkgeval/.julia/packages/GLMakie/vdrwE/src/precompiles.jl:14 in expression starting at /home/pkgeval/.julia/packages/GLMakie/vdrwE/src/GLMakie.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile GLMakie [e9467ef8-e4e7-5192-8a1a-b1aee30e663a] to "/home/pkgeval/.julia/compiled/v1.12/GLMakie/jl_D92Tqd". Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3311 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}})() @ Base ./loading.jl:2679 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:93 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:88 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:114 [7] #invokelatest_gr#232 @ ./reflection.jl:1297 [inlined] [8] invokelatest_gr @ ./reflection.jl:1289 [inlined] [9] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3882 [10] maybe_cachefile_lock @ ./loading.jl:3879 [inlined] [11] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2665 [12] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2493 [13] macro expansion @ ./loading.jl:2421 [inlined] [14] macro expansion @ ./lock.jl:376 [inlined] [15] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2386 [16] require(into::Module, mod::Symbol) @ Base ./loading.jl:2362 [17] top-level scope @ ~/.julia/packages/Molly/9kVlN/ext/MollyGLMakieExt.jl:7 [18] include(mod::Module, _path::String) @ Base ./Base.jl:306 [19] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3024 [20] top-level scope @ stdin:5 [21] eval(m::Module, e::Any) @ Core ./boot.jl:489 [22] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2870 [23] include_string @ ./loading.jl:2880 [inlined] [24] exec_options(opts::Base.JLOptions) @ Base ./client.jl:315 [25] _start() @ Base ./client.jl:550 in expression starting at /home/pkgeval/.julia/packages/Molly/9kVlN/ext/MollyGLMakieExt.jl:4 in expression starting at stdin:5 GLMakie Failed to precompile GLMakie [e9467ef8-e4e7-5192-8a1a-b1aee30e663a] to "/home/pkgeval/.julia/compiled/v1.12/GLMakie/jl_Td0bLs". ┌ Warning: GLFW couldn't create an OpenGL window. │ This likely means, you don't have an OpenGL capable Graphic Card, │ or you don't have an OpenGL 3.3 capable video driver installed. │ Have a look at the troubleshooting section in the GLMakie readme: │ https://github.com/MakieOrg/Makie.jl/tree/master/GLMakie#troubleshooting-opengl. └ @ GLMakie ~/.julia/packages/GLMakie/vdrwE/src/screen.jl:293 ERROR: LoadError: GLFWError (API_UNAVAILABLE): GLX: No GLXFBConfigs returned Stacktrace: [1] _ErrorCallbackWrapper(code::Int32, description::Cstring) @ GLFW ~/.julia/packages/GLFW/wA4ue/src/callback.jl:46 [2] CreateWindow(width::Int64, height::Int64, title::String, monitor::GLFW.Monitor, share::GLFW.Window) @ GLFW ~/.julia/packages/GLFW/wA4ue/src/glfw3.jl:600 [3] GLFW.Window(; name::String, resolution::Tuple{Int64, Int64}, debugging::Bool, major::Int64, minor::Int64, windowhints::Vector{Tuple{UInt32, Integer}}, contexthints::Vector{Tuple{UInt32, Integer}}, visible::Bool, focus::Bool, fullscreen::Bool, monitor::Nothing, share::GLFW.Window) @ GLFW ~/.julia/packages/GLFW/wA4ue/src/glfw3.jl:404 [4] Window @ ~/.julia/packages/GLFW/wA4ue/src/glfw3.jl:362 [inlined] [5] empty_screen(debugging::Bool, reuse::Bool, window::Nothing) @ GLMakie ~/.julia/packages/GLMakie/vdrwE/src/screen.jl:284 [6] empty_screen(debugging::Bool; reuse::Bool, window::Nothing) @ GLMakie ~/.julia/packages/GLMakie/vdrwE/src/screen.jl:258 [7] singleton_screen(debugging::Bool) @ GLMakie ~/.julia/packages/GLMakie/vdrwE/src/screen.jl:395 [8] macro expansion @ ~/.julia/packages/GLMakie/vdrwE/src/precompiles.jl:20 [inlined] [9] macro expansion @ ~/.julia/packages/PrecompileTools/gn08A/src/workloads.jl:73 [inlined] [10] macro expansion @ ~/.julia/packages/GLMakie/vdrwE/src/precompiles.jl:17 [inlined] [11] macro expansion @ ~/.julia/packages/PrecompileTools/gn08A/src/workloads.jl:121 [inlined] [12] top-level scope @ ~/.julia/packages/GLMakie/vdrwE/src/precompiles.jl:15 [13] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:307 [14] top-level scope @ ~/.julia/packages/GLMakie/vdrwE/src/GLMakie.jl:103 [15] include(mod::Module, _path::String) @ Base ./Base.jl:306 [16] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3024 [17] top-level scope @ stdin:5 [18] eval(m::Module, e::Any) @ Core ./boot.jl:489 [19] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2870 [20] include_string @ ./loading.jl:2880 [inlined] [21] exec_options(opts::Base.JLOptions) @ Base ./client.jl:315 [22] _start() @ Base ./client.jl:550 in expression starting at /home/pkgeval/.julia/packages/GLMakie/vdrwE/src/precompiles.jl:14 in expression starting at /home/pkgeval/.julia/packages/GLMakie/vdrwE/src/GLMakie.jl:1 in expression starting at stdin:5 in expression starting at /PkgEval.jl/scripts/precompile.jl:34 Precompilation failed after 2221.7s ################################################################################ # Testing # Testing Molly Status `/tmp/jl_NN7NkN/Project.toml` ⌅ [21141c5a] AMDGPU v1.3.6 [4c88cf16] Aqua v0.8.14 [a963bdd2] AtomsBase v0.5.2 [ed7c10db] AtomsBaseTesting v0.4.0 [a3e0e189] AtomsCalculators v0.2.3 [6e4b80f9] BenchmarkTools v1.6.3 [de9282ab] BioStructures v4.7.0 ⌃ [052768ef] CUDA v5.8.2 [46823bd8] Chemfiles v0.10.43 [8bb1440f] DelimitedFiles v1.9.1 [7da242da] Enzyme v0.13.119 [26cc04aa] FiniteDifferences v0.12.33 [e9467ef8] GLMakie v0.13.8 [0c68f7d7] GPUArrays v11.3.4 [5ab0869b] KernelDensity v0.6.11 [eff96d63] Measurements v2.14.1 [dde4c033] Metal v1.9.1 [aa0f7f06] Molly v0.23.1 [64031d72] SimpleCrystals v0.4.5 [10745b16] Statistics v1.11.1 [fd094767] Suppressor v0.2.8 [8f75cd03] oneAPI v2.6.0 [37e2e46d] LinearAlgebra v1.12.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_NN7NkN/Manifest.toml` ⌅ [21141c5a] AMDGPU v1.3.6 [621f4979] AbstractFFTs v1.5.0 [1520ce14] AbstractTrees v0.4.5 [6a4ca0a5] AcceleratedKernels v0.4.3 [79e6a3ab] Adapt v4.4.0 [35492f91] AdaptivePredicates v1.2.0 [66dad0bd] AliasTables v1.1.3 [27a7e980] Animations v0.4.2 [4c88cf16] Aqua v0.8.14 [dce04be8] ArgCheck v2.5.0 [ec485272] ArnoldiMethod v0.4.0 [a9b6321e] Atomix v1.1.2 [a963bdd2] AtomsBase v0.5.2 [ed7c10db] AtomsBaseTesting v0.4.0 [a3e0e189] AtomsCalculators v0.2.3 [67c07d97] Automa v1.1.0 [13072b0f] AxisAlgorithms v1.1.0 [39de3d68] AxisArrays v0.4.8 ⌅ [ab4f0b2a] BFloat16s v0.5.1 [18cc8868] BaseDirs v1.3.2 [6e4b80f9] BenchmarkTools v1.6.3 [47718e42] BioGenerics v0.1.5 [de9282ab] BioStructures v4.7.0 [3c28c6f8] BioSymbols v5.2.0 [fa961155] CEnum v0.5.0 [96374032] CRlibm v1.0.2 ⌃ [052768ef] CUDA v5.8.2 ⌅ [1af6417a] CUDA_Runtime_Discovery v0.3.5 [49dc2e85] Calculus v0.5.2 [69e1c6dd] CellListMap v0.9.15 [d360d2e6] ChainRulesCore v1.26.0 [46823bd8] Chemfiles v0.10.43 [ae650224] ChunkSplitters v3.1.2 [523fee87] CodecBzip2 v0.8.5 [944b1d66] CodecZlib v0.7.8 [a2cac450] ColorBrewer v0.4.2 [35d6a980] ColorSchemes v3.31.0 [3da002f7] ColorTypes v0.12.1 [c3611d14] ColorVectorSpace v0.11.0 [5ae59095] Colors v0.13.1 [861a8166] Combinatorics v1.1.0 [34da2185] Compat v4.18.1 [95dc2771] ComputePipeline v0.1.6 [187b0558] ConstructionBase v1.6.0 [d38c429a] Contour v0.6.3 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.8.1 [864edb3b] DataStructures v0.19.3 [e2d170a0] DataValueInterfaces v1.0.0 [927a84f5] DelaunayTriangulation v1.6.6 [8bb1440f] DelimitedFiles v1.9.1 [b4f34e82] Distances v0.10.12 [31c24e10] Distributions v0.25.123 [ffbed154] DocStringExtensions v0.9.5 [4e289a0a] EnumX v1.0.6 [7da242da] Enzyme v0.13.119 [f151be2c] EnzymeCore v0.8.18 [429591f6] ExactPredicates v2.2.9 [e2ba6199] ExprTools v0.1.10 [411431e0] Extents v0.1.6 [8f5d6c58] EzXML v1.2.3 [b86e33f2] FFTA v0.3.1 [7a1cc6ca] FFTW v1.10.0 [5789e2e9] FileIO v1.17.1 [8fc22ac5] FilePaths v0.9.0 [48062228] FilePathsBase v0.9.24 [1a297f60] FillArrays v1.16.0 [26cc04aa] FiniteDifferences v0.12.33 [53c48c17] FixedPointNumbers v0.8.5 [1fa38f19] Format v1.3.7 [b38be410] FreeType v4.1.1 [663a7486] FreeTypeAbstraction v0.10.8 [f7f18e0c] GLFW v3.4.6 [e9467ef8] GLMakie v0.13.8 [0c68f7d7] GPUArrays v11.3.4 [46192b85] GPUArraysCore v0.2.0 [61eb1bfa] GPUCompiler v1.8.1 ⌅ [096a3bc2] GPUToolbox v0.2.0 [5c1252a2] GeometryBasics v0.5.10 [86223c79] Graphs v1.13.4 [3955a311] GridLayoutBase v0.11.2 [42e2da0e] Grisu v1.0.2 [076d061b] HashArrayMappedTries v0.2.0 [34004b35] HypergeometricFunctions v0.3.28 [2803e5a7] ImageAxes v0.6.12 [c817782e] ImageBase v0.1.7 [a09fc81d] ImageCore v0.10.5 [82e4d734] ImageIO v0.6.9 [bc367c6b] ImageMetadata v0.9.10 [9b13fd28] IndirectArrays v1.0.0 [d25df0c9] Inflate v0.1.5 [842dd82b] InlineStrings v1.4.5 [18e54dd8] IntegerMathUtils v0.1.3 [a98d9a8b] Interpolations v0.16.2 [d1acc4aa] IntervalArithmetic v1.0.2 [8197267c] IntervalSets v0.7.13 [3587e190] InverseFunctions v0.1.17 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.6 [f1662d9f] Isoband v0.1.1 [c8e1da08] IterTools v1.10.0 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.1 [682c06a0] JSON v1.4.0 [b835a17e] JpegTurbo v0.1.6 [63c18a36] KernelAbstractions v0.9.39 [5ab0869b] KernelDensity v0.6.11 [929cbde3] LLVM v9.4.4 [8b046642] LLVMLoopInfo v1.0.0 [b964fa9f] LaTeXStrings v1.4.0 [8cdb02fc] LazyModules v0.3.1 [2ab3a3ac] LogExpFunctions v0.3.29 [1914dd2f] MacroTools v0.5.16 [ee78f7c6] Makie v0.24.8 [dbb5928d] MappedArrays v0.4.3 [0a4f8689] MathTeXEngine v0.6.7 [eff96d63] Measurements v2.14.1 [7269a6da] MeshIO v0.5.3 [dde4c033] Metal v1.9.1 [e1d29d7a] Missings v1.2.0 [66fc600b] ModernGL v1.1.8 [aa0f7f06] Molly v0.23.1 [e94cdb99] MosaicViews v0.3.4 [46d2c3a1] MuladdMacro v0.2.4 [5da4648a] NVTX v1.0.3 [b8a86587] NearestNeighbors v0.4.26 [f09324ee] Netpbm v1.1.1 [d8793406] ObjectFile v0.5.0 [e86c9b32] ObjectiveC v3.4.2 [510215fc] Observables v0.5.5 [6fe1bfb0] OffsetArrays v1.17.0 [52e1d378] OpenEXR v0.3.3 [bac558e1] OrderedCollections v1.8.1 [90014a1f] PDMats v0.11.37 [f57f5aa1] PNGFiles v0.4.4 [19eb6ba3] Packing v0.5.1 [5432bcbf] PaddedViews v0.5.12 [d96e819e] Parameters v0.12.3 [69de0a69] Parsers v2.8.3 [7b2266bf] PeriodicTable v1.2.1 [eebad327] PkgVersion v0.3.3 [995b91a9] PlotUtils v1.4.4 [647866c9] PolygonOps v0.1.2 [2dfb63ee] PooledArrays v1.4.3 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.1 ⌅ [08abe8d2] PrettyTables v2.4.0 [27ebfcd6] Primes v0.5.7 [92933f4c] ProgressMeter v1.11.0 [43287f4e] PtrArrays v1.3.0 [4b34888f] QOI v1.0.2 [1fd47b50] QuadGK v2.11.2 [74087812] Random123 v1.7.1 [e6cf234a] RandomNumbers v1.6.0 [b3c3ace0] RangeArrays v0.3.2 [c84ed2f1] Ratios v0.4.5 [3cdcf5f2] RecipesBase v1.3.4 [189a3867] Reexport v1.2.2 [05181044] RelocatableFolders v1.0.1 [ae029012] Requires v1.3.1 [708f8203] Richardson v1.4.2 [79098fc4] Rmath v0.9.0 [5eaf0fd0] RoundingEmulator v0.2.1 [fdea26ae] SIMD v3.7.2 [71d1d633] SPIRVIntrinsics v0.5.6 [7e506255] ScopedValues v1.5.0 [6c6a2e73] Scratch v1.3.0 [91c51154] SentinelArrays v1.4.9 [efcf1570] Setfield v1.1.2 [65257c39] ShaderAbstractions v0.5.0 [992d4aef] Showoff v1.0.3 [73760f76] SignedDistanceFields v0.4.1 [64031d72] SimpleCrystals v0.4.5 [699a6c99] SimpleTraits v0.9.5 [45858cf5] Sixel v0.1.5 [a2af1166] SortingAlgorithms v1.2.2 [276daf66] SpecialFunctions v2.6.1 [860ef19b] StableRNGs v1.0.4 [cae243ae] StackViews v0.1.2 [90137ffa] StaticArrays v1.9.16 [1e83bf80] StaticArraysCore v1.4.4 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.8.0 [2913bbd2] StatsBase v0.34.10 [4c63d2b9] StatsFuns v1.5.2 [892a3eda] StringManipulation v0.4.2 [09ab397b] StructArrays v0.7.2 [53d494c1] StructIO v0.3.1 [ec057cc2] StructUtils v2.6.2 [fd094767] Suppressor v0.2.8 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [62fd8b95] TensorCore v0.1.1 [1c621080] TestItems v1.0.0 [731e570b] TiffImages v0.11.6 [e689c965] Tracy v0.1.6 [3bb67fe8] TranscodingStreams v0.11.3 [981d1d27] TriplotBase v0.1.0 [3a884ed6] UnPack v1.0.2 [1cfade01] UnicodeFun v0.4.1 [1986cc42] Unitful v1.27.0 [a7773ee8] UnitfulAtomic v1.0.0 [013be700] UnsafeAtomics v0.3.0 [e3aaa7dc] WebP v0.1.3 [efce3f68] WoodburyMatrices v1.1.0 [8f75cd03] oneAPI v2.6.0 [6e34b625] Bzip2_jll v1.0.9+0 [4e9b3aee] CRlibm_jll v1.0.1+0 ⌅ [4ee394cb] CUDA_Driver_jll v0.13.1+0 ⌅ [76a88914] CUDA_Runtime_jll v0.17.1+0 [83423d85] Cairo_jll v1.18.5+0 [78a364fa] Chemfiles_jll v0.10.4+0 [ee1fde0b] Dbus_jll v1.16.2+0 [5ae413db] EarCut_jll v2.2.4+0 [7cc45869] Enzyme_jll v0.0.240+0 [2702e6a9] EpollShim_jll v0.0.20230411+1 [2e619515] Expat_jll v2.7.3+0 [b22a6f82] FFMPEG_jll v8.0.1+0 [f5851436] FFTW_jll v3.3.11+0 [a3f928ae] Fontconfig_jll v2.17.1+0 [d7e528f0] FreeType2_jll v2.13.4+0 [559328eb] FriBidi_jll v1.0.17+0 [0656b61e] GLFW_jll v3.4.1+0 [b0724c58] GettextRuntime_jll v0.22.4+0 [59f7168a] Giflib_jll v5.2.3+0 [7746bdde] Glib_jll v2.86.2+0 [3b182d85] Graphite2_jll v1.3.15+0 [2e76f6c2] HarfBuzz_jll v8.5.1+0 ⌃ [e33a78d0] Hwloc_jll v2.12.1+0 [905a6f67] Imath_jll v3.2.2+0 [1d5cc7b8] IntelOpenMP_jll v2025.2.0+0 [aacddb02] JpegTurbo_jll v3.1.4+0 [9c1d0b0a] JuliaNVTXCallbacks_jll v0.2.1+0 [c1c5ebd0] LAME_jll v3.100.3+0 [88015f11] LERC_jll v4.0.1+0 [f52de702] LLVMDowngrader_jll v0.6.0+1 [dad2f222] LLVMExtra_jll v0.0.38+0 [1d63c593] LLVMOpenMP_jll v18.1.8+0 ⌅ [86de99a1] LLVM_jll v18.1.7+4 [dd4b983a] LZO_jll v2.10.3+0 [ad6e5548] LibTracyClient_jll v0.13.1+0 ⌅ [e9f186c6] Libffi_jll v3.4.7+0 [7e76a0d4] Libglvnd_jll v1.7.1+1 [94ce4f54] Libiconv_jll v1.18.0+0 [4b2f31a3] Libmount_jll v2.41.2+0 [89763e89] Libtiff_jll v4.7.2+0 [38a345b3] Libuuid_jll v2.41.2+0 [856f044c] MKL_jll v2025.2.0+0 [700fe977] NEO_jll v25.44.36015+0 [e98f9f5b] NVTX_jll v3.2.2+0 [e7412a2a] Ogg_jll v1.3.6+0 [6cdc7f73] OpenBLASConsistentFPCSR_jll v0.3.30+0 [6cb37087] OpenCL_jll v2024.10.24+1 [18a262bb] OpenEXR_jll v3.4.4+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [91d4177d] Opus_jll v1.6.0+0 [36c8627f] Pango_jll v1.57.0+0 ⌅ [30392449] Pixman_jll v0.44.2+0 ⌅ [873c0968] ROCmDeviceLibs_jll v6.2.1+0 [f50d1b31] Rmath_jll v0.5.1+0 [4a5d46fc] SPIRV_LLVM_Translator_jll v21.1.1+0 [6ac6d60f] SPIRV_Tools_jll v2025.4.0+0 [a2964d1f] Wayland_jll v1.24.0+0 [02c8fc9c] XML2_jll v2.15.1+0 [ffd25f8a] XZ_jll v5.8.2+0 [4f6342f7] Xorg_libX11_jll v1.8.12+0 [0c0b7dd1] Xorg_libXau_jll v1.0.13+0 [935fb764] Xorg_libXcursor_jll v1.2.4+0 [a3789734] Xorg_libXdmcp_jll v1.1.6+0 [1082639a] Xorg_libXext_jll v1.3.7+0 [d091e8ba] Xorg_libXfixes_jll v6.0.2+0 [a51aa0fd] Xorg_libXi_jll v1.8.3+0 [d1454406] Xorg_libXinerama_jll v1.1.6+0 [ec84b674] Xorg_libXrandr_jll v1.5.5+0 [ea2f1a96] Xorg_libXrender_jll v0.9.12+0 [c7cfdc94] Xorg_libxcb_jll v1.17.1+0 [cc61e674] Xorg_libxkbfile_jll v1.1.3+0 [35661453] Xorg_xkbcomp_jll v1.4.7+0 [33bec58e] Xorg_xkeyboard_config_jll v2.44.0+0 [c5fb5394] Xorg_xtrans_jll v1.6.0+0 [3161d3a3] Zstd_jll v1.5.7+1 [1e29f10c] demumble_jll v1.3.0+0 [09858cae] gmmlib_jll v22.8.2+0 [9a68df92] isoband_jll v0.2.3+0 [a4ae2306] libaom_jll v3.13.1+0 [0ac62f75] libass_jll v0.17.4+0 [1183f4f0] libdecor_jll v0.2.2+0 [f638f0a6] libfdk_aac_jll v2.0.4+0 [94295238] libigc_jll v2.22.2+0 [b53b4c65] libpng_jll v1.6.54+0 [075b6546] libsixel_jll v1.10.5+0 [f27f6e37] libvorbis_jll v1.3.8+0 [c5f90fcd] libwebp_jll v1.6.0+0 [f4bc562b] oneAPI_Level_Zero_Headers_jll v1.13.0+2 [13eca655] oneAPI_Level_Zero_Loader_jll v1.25.1+0 [b049733a] oneAPI_Support_jll v0.9.2+0 [1317d2d5] oneTBB_jll v2022.0.0+1 ⌅ [1270edf5] x264_jll v10164.0.1+0 [dfaa095f] x265_jll v4.1.0+0 [d8fb68d0] xkbcommon_jll v1.13.0+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [8bf52ea8] CRC32c v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.12.1 [de0858da] Printf v1.11.0 [9abbd945] Profile v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [1a1011a3] SharedArrays v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.12.0 [f489334b] StyledStrings v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [d55e3150] LLD_jll v18.1.7+5 [deac9b47] LibCURL_jll v8.15.0+0 [e37daf67] LibGit2_jll v1.9.0+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.11.4 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.7+0 [458c3c95] OpenSSL_jll v3.5.4+0 [efcefdf7] PCRE2_jll v10.44.0+1 [bea87d4a] SuiteSparse_jll v7.8.3+2 [83775a58] Zlib_jll v1.3.1+2 [8f36deef] libLLVM_jll v18.1.7+5 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.64.0+1 [3f19e933] p7zip_jll v17.7.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... Precompiling packages... 38322.0 ms ✓ AMDGPU 1 dependency successfully precompiled in 40 seconds. 89 already precompiled. ┌ Error: ROCm discovery failed! │ Discovered ROCm path: . │ Use `ROCM_PATH` env variable to specify ROCm directory. │ │ exception = │ AssertionError: isdir(libdir) │ Stacktrace: │ [1] find_rocm_library(lib::String; rocm_path::String, ext::String) │ @ AMDGPU.ROCmDiscovery ~/.julia/packages/AMDGPU/IDGfT/src/discovery/utils.jl:113 │ [2] find_rocm_library │ @ ~/.julia/packages/AMDGPU/IDGfT/src/discovery/utils.jl:111 [inlined] │ [3] __init__() │ @ AMDGPU.ROCmDiscovery ~/.julia/packages/AMDGPU/IDGfT/src/discovery/discovery.jl:79 │ [4] run_module_init(mod::Module, i::Int64) │ @ Base ./loading.jl:1443 │ [5] register_restored_modules(sv::Core.SimpleVector, pkg::Base.PkgId, path::String) │ @ Base ./loading.jl:1431 │ [6] _include_from_serialized(pkg::Base.PkgId, path::String, ocachepath::Nothing, depmods::Vector{Any}; register::Bool) │ @ Base ./loading.jl:1319 │ [7] _include_from_serialized │ @ ./loading.jl:1274 [inlined] │ [8] _require_search_from_serialized(pkg::Base.PkgId, sourcepath::String, build_id::UInt128, stalecheck::Bool; reasons::Dict{String, Int64}, DEPOT_PATH::Vector{String}) │ @ Base ./loading.jl:2115 │ [9] _require_search_from_serialized │ @ ./loading.jl:2009 [inlined] │ [10] __require_prelocked(pkg::Base.PkgId, env::String) │ @ Base ./loading.jl:2627 │ [11] _require_prelocked(uuidkey::Base.PkgId, env::String) │ @ Base ./loading.jl:2493 │ [12] macro expansion │ @ ./loading.jl:2421 [inlined] │ [13] macro expansion │ @ ./lock.jl:376 [inlined] │ [14] __require(into::Module, mod::Symbol) │ @ Base ./loading.jl:2386 │ [15] require(into::Module, mod::Symbol) │ @ Base ./loading.jl:2362 │ [16] include(mapexpr::Function, mod::Module, _path::String) │ @ Base ./Base.jl:307 │ [17] top-level scope │ @ none:6 │ [18] eval(m::Module, e::Any) │ @ Core ./boot.jl:489 │ [19] exec_options(opts::Base.JLOptions) │ @ Base ./client.jl:283 │ [20] _start() │ @ Base ./client.jl:550 └ @ AMDGPU.ROCmDiscovery ~/.julia/packages/AMDGPU/IDGfT/src/discovery/discovery.jl:101 Precompiling packages... 6475.2 ms ✓ AtomsBaseTesting 1 dependency successfully precompiled in 8 seconds. 23 already precompiled. Precompiling packages... 3256.4 ms ✓ BenchmarkTools 1 dependency successfully precompiled in 3 seconds. 16 already precompiled. Precompiling packages... 7331.7 ms ✓ BioStructures → BioStructuresDataFramesExt 1 dependency successfully precompiled in 8 seconds. 51 already precompiled. Precompiling packages... 22931.3 ms ✓ Atomix → AtomixCUDAExt 1 dependency successfully precompiled in 25 seconds. 99 already precompiled. Precompiling packages... 51616.4 ms ✓ Metal 22588.1 ms ✓ CUDA → SpecialFunctionsExt 10789.0 ms ✓ Atomix → AtomixMetalExt 10787.1 ms ✓ Metal → SpecialFunctionsExt 4 dependencies successfully precompiled in 98 seconds. 117 already precompiled. Precompiling packages... Info Given AMDGPUEnzymeCoreExt was explicitly requested, output will be shown live  ┌ Error: ROCm discovery failed! │ Discovered ROCm path: . │ Use `ROCM_PATH` env variable to specify ROCm directory. │ │ exception = │ AssertionError: isdir(libdir) │ Stacktrace: │ [1] find_rocm_library(lib::String; rocm_path::String, ext::String) │ @ AMDGPU.ROCmDiscovery ~/.julia/packages/AMDGPU/IDGfT/src/discovery/utils.jl:113 │ [2] find_rocm_library │ @ ~/.julia/packages/AMDGPU/IDGfT/src/discovery/utils.jl:111 [inlined] │ [3] __init__() │ @ AMDGPU.ROCmDiscovery ~/.julia/packages/AMDGPU/IDGfT/src/discovery/discovery.jl:79 │ [4] run_module_init(mod::Module, i::Int64) │ @ Base ./loading.jl:1443 │ [5] register_restored_modules(sv::Core.SimpleVector, pkg::Base.PkgId, path::String) │ @ Base ./loading.jl:1431 │ [6] _include_from_serialized(pkg::Base.PkgId, path::String, ocachepath::Nothing, depmods::Vector{Any}; register::Bool) │ @ Base ./loading.jl:1319 │ [7] _include_from_serialized │ @ ./loading.jl:1274 [inlined] │ [8] _require_search_from_serialized(pkg::Base.PkgId, sourcepath::String, build_id::UInt128, stalecheck::Bool; reasons::Dict{String, Int64}, DEPOT_PATH::Vector{String}) │ @ Base ./loading.jl:2115 │ [9] _require_search_from_serialized │ @ ./loading.jl:2009 [inlined] │ [10] __require_prelocked(pkg::Base.PkgId, env::String) │ @ Base ./loading.jl:2627 │ [11] _require_prelocked(uuidkey::Base.PkgId, env::String) │ @ Base ./loading.jl:2493 │ [12] macro expansion │ @ ./loading.jl:2421 [inlined] │ [13] macro expansion │ @ ./lock.jl:376 [inlined] │ [14] __require(into::Module, mod::Symbol) │ @ Base ./loading.jl:2386 │ [15] require(into::Module, mod::Symbol) │ @ Base ./loading.jl:2362 │ [16] top-level scope │ @ ~/.julia/packages/AMDGPU/IDGfT/ext/AMDGPUEnzymeCoreExt/AMDGPUEnzymeCoreExt.jl:3 │ [17] include(mod::Module, _path::String) │ @ Base ./Base.jl:306 │ [18] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) │ @ Base ./loading.jl:3024 │ [19] top-level scope │ @ stdin:5 │ [20] eval(m::Module, e::Any) │ @ Core ./boot.jl:489 │ [21] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) │ @ Base ./loading.jl:2870 │ [22] include_string │ @ ./loading.jl:2880 [inlined] │ [23] exec_options(opts::Base.JLOptions) │ @ Base ./client.jl:315 │ [24] _start() │ @ Base ./client.jl:550 └ @ AMDGPU.ROCmDiscovery ~/.julia/packages/AMDGPU/IDGfT/src/discovery/discovery.jl:101 14257.1 ms ✓ AMDGPU → AMDGPUEnzymeCoreExt 1 dependency successfully precompiled in 16 seconds. 93 already precompiled. 1 dependency had output during precompilation: ┌ AMDGPU → AMDGPUEnzymeCoreExt │ [Output was shown above] └ Precompiling packages... 23634.5 ms ✓ CUDA → EnzymeCoreExt 1 dependency successfully precompiled in 26 seconds. 103 already precompiled. Precompiling packages... Info Given QuadGKEnzymeExt was explicitly requested, output will be shown live  ┌ Warning: Enzyme.jl support for Julia 1.12 is presently in progress. │ For the time being we recommend using 1.11 or LTS (1.10). │ │ For latest updates, check the status of support for Julia 1.12+ at │ https://github.com/EnzymeAD/Enzyme.jl/issues/2699. │ └ @ Enzyme ~/.julia/packages/Enzyme/jaHZG/src/Enzyme.jl:1587 25835.5 ms ✓ QuadGK → QuadGKEnzymeExt 1 dependency successfully precompiled in 26 seconds. 51 already precompiled. 1 dependency had output during precompilation: ┌ QuadGK → QuadGKEnzymeExt │ [Output was shown above] └ Precompiling packages... Info Given EnzymeLogExpFunctionsExt was explicitly requested, output will be shown live  ┌ Warning: Enzyme.jl support for Julia 1.12 is presently in progress. │ For the time being we recommend using 1.11 or LTS (1.10). │ │ For latest updates, check the status of support for Julia 1.12+ at │ https://github.com/EnzymeAD/Enzyme.jl/issues/2699. │ └ @ Enzyme ~/.julia/packages/Enzyme/jaHZG/src/Enzyme.jl:1587 25343.1 ms ✓ Enzyme → EnzymeLogExpFunctionsExt 1 dependency successfully precompiled in 26 seconds. 51 already precompiled. 1 dependency had output during precompilation: ┌ Enzyme → EnzymeLogExpFunctionsExt │ [Output was shown above] └ Precompiling packages... Info Given EnzymeSpecialFunctionsExt was explicitly requested, output will be shown live  ┌ Warning: Enzyme.jl support for Julia 1.12 is presently in progress. │ For the time being we recommend using 1.11 or LTS (1.10). │ │ For latest updates, check the status of support for Julia 1.12+ at │ https://github.com/EnzymeAD/Enzyme.jl/issues/2699. │ └ @ Enzyme ~/.julia/packages/Enzyme/jaHZG/src/Enzyme.jl:1587 28073.1 ms ✓ Enzyme → EnzymeSpecialFunctionsExt 1 dependency successfully precompiled in 29 seconds. 55 already precompiled. 1 dependency had output during precompilation: ┌ Enzyme → EnzymeSpecialFunctionsExt │ [Output was shown above] └ Precompiling packages... Info Given EnzymeBFloat16sExt was explicitly requested, output will be shown live  ┌ Warning: Enzyme.jl support for Julia 1.12 is presently in progress. │ For the time being we recommend using 1.11 or LTS (1.10). │ │ For latest updates, check the status of support for Julia 1.12+ at │ https://github.com/EnzymeAD/Enzyme.jl/issues/2699. │ └ @ Enzyme ~/.julia/packages/Enzyme/jaHZG/src/Enzyme.jl:1587 25314.4 ms ✓ Enzyme → EnzymeBFloat16sExt 1 dependency successfully precompiled in 27 seconds. 50 already precompiled. 1 dependency had output during precompilation: ┌ Enzyme → EnzymeBFloat16sExt │ [Output was shown above] └ Precompiling packages... Info Given AMDGPUChainRulesCoreExt was explicitly requested, output will be shown live   ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ======================================================================================  cmd: /opt/julia/bin/julia 563 running 1 of 1  signal (10): User defined signal 1 has_free_typevars at /source/src/jltypes.c:156 has_free_typevars at /source/src/jltypes.c:134 has_free_typevars at /source/src/jltypes.c:119 intersect at /source/src/subtype.c:4147 intersect_unionall_ at /source/src/subtype.c:3384 intersect_unionall at /source/src/subtype.c:3471 intersect at /source/src/subtype.c:4196 intersect_unionall_ at /source/src/subtype.c:3384 intersect_unionall at /source/src/subtype.c:3471 intersect at /source/src/subtype.c:4196 intersect_all at /source/src/subtype.c:4355 intersect_aside at /source/src/subtype.c:2568 intersect_var at /source/src/subtype.c:2805 intersect at /source/src/subtype.c:4141 intersect_invariant at /source/src/subtype.c:3795 intersect at /source/src/subtype.c:4220 intersect_tuple at /source/src/subtype.c:3692 intersect at /source/src/subtype.c:4213 intersect_unionall_ at /source/src/subtype.c:3380 intersect_unionall at /source/src/subtype.c:3471 intersect at /source/src/subtype.c:4199 intersect_unionall_ at /source/src/subtype.c:3384 intersect_unionall at /source/src/subtype.c:3471 intersect at /source/src/subtype.c:4173 intersect_all at /source/src/subtype.c:4355 jl_type_intersection_env_s at /source/src/subtype.c:4603 jl_typemap_intersection_node_visitor at /source/src/typemap.c:543 jl_typemap_intersection_visitor at /source/src/typemap.c:810 jl_typemap_intersection_memory_visitor at /source/src/typemap.c:500 jl_typemap_intersection_visitor at /source/src/typemap.c:800 jl_typemap_intersection_visitor at /source/src/typemap.c:768 get_intersect_matches at /source/src/gf.c:1935 [inlined] jl_method_table_activate at /source/src/gf.c:2780 jl_activate_methods at /source/src/staticdata_utils.c:762 [inlined] jl_restore_package_image_from_stream at /source/src/staticdata.c:4439 ijl_restore_incremental at /source/src/staticdata.c:4494 #_include_from_serialized#867 at ./loading.jl:1302 _include_from_serialized at ./loading.jl:1274 [inlined] #_require_search_from_serialized#883 at ./loading.jl:2102 _require_search_from_serialized at ./loading.jl:2009 [inlined] __require_prelocked at ./loading.jl:2627 _require_prelocked at ./loading.jl:2493 macro expansion at ./loading.jl:2421 [inlined] macro expansion at ./lock.jl:376 [inlined] __require at ./loading.jl:2386 jfptr___require_65867.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 jl_apply at /source/src/julia.h:2391 [inlined] jl_f_invoke_in_world at /source/src/builtins.c:900 require at ./loading.jl:2362 jfptr_require_46992.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 jl_apply at /source/src/julia.h:2391 [inlined] call_require at /source/src/toplevel.c:494 [inlined] eval_import_path at /source/src/toplevel.c:532 eval_import_from at /source/src/toplevel.c:670 [inlined] eval_import_from at /source/src/toplevel.c:661 jl_toplevel_eval_flex at /source/src/toplevel.c:820 ijl_toplevel_eval at /source/src/toplevel.c:1047 eval_body at /source/src/interpreter.c:655 jl_interpret_toplevel_thunk at /source/src/interpreter.c:898 jl_toplevel_eval_flex at /source/src/toplevel.c:1035 jl_eval_module_expr at /source/src/toplevel.c:197 [inlined] jl_toplevel_eval_flex at /source/src/toplevel.c:814 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 include_string at ./loading.jl:2870 _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 _include at ./loading.jl:2930 include at ./Base.jl:306 include_package_for_output at ./loading.jl:3024 jfptr_include_package_for_output_64820.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 jl_apply at /source/src/julia.h:2391 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:689 jl_interpret_toplevel_thunk at /source/src/interpreter.c:898 jl_toplevel_eval_flex at /source/src/toplevel.c:1035 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 include_string at ./loading.jl:2870 include_string at ./loading.jl:2880 [inlined] exec_options at ./client.jl:315 _start at ./client.jl:550 jfptr__start_39366.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 jl_apply at /source/src/julia.h:2391 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1139 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x7286db9fc249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file)  ============================================================== Profile collected. A report will print at the next yield point ==============================================================  ┌ Error: ROCm discovery failed! │ Discovered ROCm path: . │ Use `ROCM_PATH` env variable to specify ROCm directory. │ │ exception = │ AssertionError: isdir(libdir) │ Stacktrace: │ [1] find_rocm_library(lib::String; rocm_path::String, ext::String) │ @ AMDGPU.ROCmDiscovery ~/.julia/packages/AMDGPU/IDGfT/src/discovery/utils.jl:113 │ [2] find_rocm_library │ @ ~/.julia/packages/AMDGPU/IDGfT/src/discovery/utils.jl:111 [inlined] │ [3] __init__() │ @ AMDGPU.ROCmDiscovery ~/.julia/packages/AMDGPU/IDGfT/src/discovery/discovery.jl:79 │ [4] run_module_init(mod::Module, i::Int64) │ @ Base ./loading.jl:1443 │ [5] register_restored_modules(sv::Core.SimpleVector, pkg::Base.PkgId, path::String) │ @ Base ./loading.jl:1431 │ [6] _include_from_serialized(pkg::Base.PkgId, path::String, ocachepath::Nothing, depmods::Vector{Any}; register::Bool) │ @ Base ./loading.jl:1319 │ [7] _include_from_serialized │ @ ./loading.jl:1274 [inlined] │ [8] _require_search_from_serialized(pkg::Base.PkgId, sourcepath::String, build_id::UInt128, stalecheck::Bool; reasons::Dict{String, Int64}, DEPOT_PATH::Vector{String}) │ @ Base ./loading.jl:2115 │ [9] _require_search_from_serialized │ @ ./loading.jl:2009 [inlined] │ [10] __require_prelocked(pkg::Base.PkgId, env::String) │ @ Base ./loading.jl:2627 │ [11] _require_prelocked(uuidkey::Base.PkgId, env::String) │ @ Base ./loading.jl:2493 │ [12] macro expansion │ @ ./loading.jl:2421 [inlined] │ [13] macro expansion │ @ ./lock.jl:376 [inlined] │ [14] __require(into::Module, mod::Symbol) │ @ Base ./loading.jl:2386 │ [15] require(into::Module, mod::Symbol) │ @ Base ./loading.jl:2362 │ [16] top-level scope │ @ ~/.julia/packages/AMDGPU/IDGfT/ext/AMDGPUChainRulesCoreExt.jl:3 │ [17] include(mod::Module, _path::String) │ @ Base ./Base.jl:306 │ [18] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) │ @ Base ./loading.jl:3024 │ [19] top-level scope │ @ stdin:5 │ [20] eval(m::Module, e::Any) │ @ Core ./boot.jl:489 │ [21] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) │ @ Base ./loading.jl:2870 │ [22] include_string │ @ ./loading.jl:2880 [inlined] │ [23] exec_options(opts::Base.JLOptions) │ @ Base ./client.jl:315 │ [24] _start() │ @ Base ./client.jl:550 └ @ AMDGPU.ROCmDiscovery ~/.julia/packages/AMDGPU/IDGfT/src/discovery/discovery.jl:101 ┌ Error: Profile printing listener crashed │ exception = │ This interactive function requires a stdlib to be loaded, and package code should instead use it directly from that stdlib. │ Stacktrace: │ [1] error(s::String) │ @ Base ./error.jl:44 │ [2] require_stdlib(package_uuidkey::Base.PkgId, ext::Nothing, from::Module) │ @ Base ./loading.jl:2789 │ [3] require_stdlib │ @ ./loading.jl:2785 [inlined] │ [4] macro expansion │ @ ./some.jl:158 [inlined] │ [5] profile_printing_listener(cond::Base.AsyncCondition) │ @ Base ./Base.jl:333 │ [6] (::Base.var"#start_profile_listener##0#start_profile_listener##1"{Base.AsyncCondition})() │ @ Base ./Base.jl:352 └ @ Base Base.jl:343 14586.9 ms ✓ AMDGPU → AMDGPUChainRulesCoreExt 1 dependency successfully precompiled in 16 seconds. 98 already precompiled. 1 dependency had output during precompilation: ┌ AMDGPU → AMDGPUChainRulesCoreExt │ [Output was shown above] └ Precompiling packages... ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 479 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 poptask at ./task.jl:1216 wait at ./task.jl:1228 #wait#398 at ./condition.jl:141 wait at ./process.jl:685 wait at ./process.jl:686 [inlined] success at ./process.jl:555 jfptr_success_17854.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 #compilecache#894 at ./loading.jl:3233 compilecache at ./loading.jl:3189 [inlined] #_precompilepkgs##38 at ./precompilation.jl:1026 with_logstate at ./logging/logging.jl:542 with_logger at ./logging/logging.jl:653 [inlined] #_precompilepkgs##36 at ./precompilation.jl:1020 [inlined] #mkpidlock#8 at /source/usr/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:93 jfptr_YY.mkpidlockYY.8_58603.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 mkpidlock at /source/usr/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:90 #mkpidlock#7 at /source/usr/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:88 [inlined] mkpidlock at /source/usr/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:88 jfptr_mkpidlock_72202.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 jl_apply at /source/src/julia.h:2391 [inlined] jl_f__apply_iterate at /source/src/builtins.c:868 #trymkpidlock#13 at /source/usr/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:114 _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 jl_apply at /source/src/julia.h:2391 [inlined] jl_f__apply_iterate at /source/src/builtins.c:868 trymkpidlock at /source/usr/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:112 _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 jl_apply at /source/src/julia.h:2391 [inlined] jl_f_invoke_in_world at /source/src/builtins.c:900 #invokelatest_gr#232 at ./reflection.jl:1297 [inlined] invokelatest_gr at ./reflection.jl:1289 [inlined] precompile_pkgs_maybe_cachefile_lock at ./precompilation.jl:1217 #_precompilepkgs##32 at ./precompilation.jl:984 jfptr_YY._precompilepkgsYY.YY.32_17343.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 jl_apply at /source/src/julia.h:2391 [inlined] start_task at /source/src/task.c:1252 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 poptask at ./task.jl:1216 wait at ./task.jl:1228 #wait#398 at ./condition.jl:141 wait at ./process.jl:685 wait at ./process.jl:686 jfptr_wait_37520.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 subprocess_handler at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2553 unknown function (ip: 0x7e371f383fd3) at (unknown file) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 #205 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2493 withenv at ./env.jl:265 #190 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2308 with_temp_env at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2161 #186 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2275 #mktempdir#21 at ./file.jl:936 unknown function (ip: 0x7e371f37a6fc) at (unknown file) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 mktempdir at ./file.jl:932 mktempdir at ./file.jl:932 #sandbox#182 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2222 [inlined] sandbox at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2212 unknown function (ip: 0x7e371f36de51) at (unknown file) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 #test#193 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2478 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2384 [inlined] #test#170 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:538 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:515 unknown function (ip: 0x7e371f36da81) at (unknown file) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 #test#84 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:169 unknown function (ip: 0x7e371f36bee0) at (unknown file) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:158 #test#82 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:157 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:157 [inlined] #test#81 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:156 [inlined] test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:156 unknown function (ip: 0x7e371f36289f) at (unknown file) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 jl_apply at /source/src/julia.h:2391 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:689 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 jl_interpret_toplevel_thunk at /source/src/interpreter.c:898 jl_toplevel_eval_flex at /source/src/toplevel.c:1035 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 include_string at ./loading.jl:2870 _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 _include at ./loading.jl:2930 include at ./Base.jl:306 exec_options at ./client.jl:317 _start at ./client.jl:550 jfptr__start_39366.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 jl_apply at /source/src/julia.h:2391 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1139 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x7e373b4aa249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.12/Profile/src/Profile.jl:1361 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x00007e3720ffc010 Total snapshots: 71. Utilization: 0% ╎71 @Base/client.jl:550 _start() ╎ 71 @Base/client.jl:317 exec_options(opts::Base.JLOptions) ╎ 71 @Base/Base.jl:306 include(mod::Module, _path::String) ╎ 71 @Base/loading.jl:2930 _include(mapexpr::Function, mod::Module, _path:… ╎ 71 @Base/loading.jl:2870 include_string(mapexpr::typeof(identity), mod:… ╎ 71 @Base/boot.jl:489 eval(m::Module, e::Any) ╎ ╎ 71 @Pkg/src/API.jl:156 kwcall(::@NamedTuple{julia_args::Cmd}, ::typeo… ╎ ╎ 71 @Pkg/src/API.jl:156 #test#81 ╎ ╎ 71 @Pkg/src/API.jl:157 test ╎ ╎ 71 @Pkg/src/API.jl:157 test(pkgs::Vector{String}; kwargs::Base.Pai… ╎ ╎ 71 @Pkg/src/API.jl:158 kwcall(::@NamedTuple{julia_args::Cmd}, ::t… ╎ ╎ ╎ 71 @Pkg/src/API.jl:169 test(pkgs::Vector{PackageSpec}; io::IOCon… ╎ ╎ ╎ 71 @Pkg/src/API.jl:515 kwcall(::@NamedTuple{julia_args::Cmd, io… ╎ ╎ ╎ 71 @Pkg/src/API.jl:538 test(ctx::Pkg.Types.Context, pkgs::Vect… ╎ ╎ ╎ 71 @Pkg/…perations.jl:2384 test ╎ ╎ ╎ 71 @Pkg/…perations.jl:2478 test(ctx::Pkg.Types.Context, pkgs… ╎ ╎ ╎ ╎ 71 @Pkg/…erations.jl:2212 kwcall(::@NamedTuple{preferences:… ╎ ╎ ╎ ╎ 71 @Pkg/…erations.jl:2222 #sandbox#182 ╎ ╎ ╎ ╎ 71 @Base/file.jl:932 mktempdir(fn::Function) ╎ ╎ ╎ ╎ 71 @Base/file.jl:932 mktempdir(fn::Function, parent::Str… ╎ ╎ ╎ ╎ 71 @Base/file.jl:936 mktempdir(fn::Pkg.Operations.var"#… ╎ ╎ ╎ ╎ ╎ 71 @Pkg/…ations.jl:2275 (::Pkg.Operations.var"#186#187… ╎ ╎ ╎ ╎ ╎ 71 @Pkg/…ations.jl:2161 with_temp_env(fn::Pkg.Operati… ╎ ╎ ╎ ╎ ╎ 71 @Pkg/…tions.jl:2308 (::Pkg.Operations.var"#190#19… ╎ ╎ ╎ ╎ ╎ 71 @Base/env.jl:265 withenv(::Pkg.Operations.var"#2… ╎ ╎ ╎ ╎ ╎ 71 @Pkg/…tions.jl:2493 (::Pkg.Operations.var"#205#… ╎ ╎ ╎ ╎ ╎ ╎ 71 @Pkg/…ions.jl:2553 subprocess_handler(cmd::Cmd… ╎ ╎ ╎ ╎ ╎ ╎ 71 @Base/…ess.jl:686 wait(x::Base.Process) ╎ ╎ ╎ ╎ ╎ ╎ 71 @Base/…ess.jl:685 wait(x::Base.Process, sync… ╎ ╎ ╎ ╎ ╎ ╎ 71 @Base/…on.jl:141 wait(c::Base.GenericCondit… ╎ ╎ ╎ ╎ ╎ ╎ 71 @Base/…sk.jl:1228 wait() 70╎ ╎ ╎ ╎ ╎ ╎ ╎ 71 @Base/…sk.jl:1216 poptask(W::Base.Intrusi… [1] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 poptask at ./task.jl:1216 wait at ./task.jl:1228 #wait#398 at ./condition.jl:141 _trywait at ./asyncevent.jl:163 profile_printing_listener at ./Base.jl:332 #start_profile_listener##0 at ./Base.jl:352 jfptr_YY.start_profile_listenerYY.YY.0_9934.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 jl_apply at /source/src/julia.h:2391 [inlined] start_task at /source/src/task.c:1252 unknown function (ip: (nil)) at (unknown file) Allocations: 25107932 (Pool: 25107194; Big: 738); GC: 25 [479] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/Molly/9kVlN/test/runtests.jl:14 _ZN4llvm20LatencyPriorityQueue32AdjustPriorityOfUnscheduledPredsEPNS_5SUnitE.part.0 at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm20LatencyPriorityQueue13scheduledNodeEPNS_5SUnitE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN12_GLOBAL__N_120SchedulePostRATDList8scheduleEv at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN12_GLOBAL__N_115PostRAScheduler20runOnMachineFunctionERN4llvm15MachineFunctionE.part.0 at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm19MachineFunctionPass13runOnFunctionERNS_8FunctionE.part.0 at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm13FPPassManager13runOnFunctionERNS_8FunctionE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm13FPPassManager11runOnModuleERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm6legacy15PassManagerImpl3runERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm3orc14SimpleCompilerclERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) operator() at /source/src/jitlayers.cpp:1561 addModule at /source/src/jitlayers.cpp:2044 jl_compile_codeinst_now at /source/src/jitlayers.cpp:626 jl_compile_codeinst_impl at /source/src/jitlayers.cpp:824 jl_compile_method_internal at /source/src/gf.c:3524 _jl_invoke at /source/src/gf.c:4002 [inlined] ijl_apply_generic at /source/src/gf.c:4210 lift_keyvalue_get! at ./../usr/share/julia/Compiler/src/ssair/passes.jl:1028 sroa_pass! at ./../usr/share/julia/Compiler/src/ssair/passes.jl:1410 run_passes_ipo_safe at ./../usr/share/julia/Compiler/src/optimize.jl:1013 run_passes_ipo_safe at ./../usr/share/julia/Compiler/src/optimize.jl:1027 [inlined] optimize at ./../usr/share/julia/Compiler/src/optimize.jl:1002 jfptr_optimize_81947.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 finish_nocycle at ./../usr/share/julia/Compiler/src/typeinfer.jl:202 jfptr_finish_nocycle_81800.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 typeinf at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:4508 typeinf_ext at ./../usr/share/julia/Compiler/src/typeinfer.jl:1254 typeinf_ext_toplevel at ./../usr/share/julia/Compiler/src/typeinfer.jl:1437 [inlined] typeinf_ext_toplevel at ./../usr/share/julia/Compiler/src/typeinfer.jl:1446 jfptr_typeinf_ext_toplevel_80948.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 jl_apply at /source/src/julia.h:2391 [inlined] jl_type_infer at /source/src/gf.c:462 jl_compile_method_internal at /source/src/gf.c:3512 _jl_invoke at /source/src/gf.c:4002 [inlined] ijl_apply_generic at /source/src/gf.c:4210 jl_apply at /source/src/julia.h:2391 [inlined] jl_f_invoke_in_world at /source/src/builtins.c:900 ansi_write_ at ./strings/annotated_io.jl:218 [inlined] print at ./strings/annotated_io.jl:243 [inlined] print at ./strings/io.jl:46 print_tree at /source/usr/share/julia/stdlib/v1.12/Profile/src/Profile.jl:1238 tree at /source/usr/share/julia/stdlib/v1.12/Profile/src/Profile.jl:1308 print_group at /source/usr/share/julia/stdlib/v1.12/Profile/src/Profile.jl:389 #print#5 at /source/usr/share/julia/stdlib/v1.12/Profile/src/Profile.jl:331 print at /source/usr/share/julia/stdlib/v1.12/Profile/src/Profile.jl:271 [inlined] print at /source/usr/share/julia/stdlib/v1.12/Profile/src/Profile.jl:271 [inlined] print at /source/usr/share/julia/stdlib/v1.12/Profile/src/Profile.jl:271 _peek_report at /source/usr/share/julia/stdlib/v1.12/Profile/src/Profile.jl:91 unknown function (ip: 0x79899ad8fa8f) at (unknown file) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 jl_apply at /source/src/julia.h:2391 [inlined] jl_f_invokelatest at /source/src/builtins.c:881 profile_printing_listener at ./Base.jl:334 #start_profile_listener##0 at ./Base.jl:352 jfptr_YY.start_profile_listenerYY.YY.0_9934.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 jl_apply at /source/src/julia.h:2391 [inlined] start_task at /source/src/task.c:1252 unknown function (ip: (nil)) at (unknown file) Allocations: 98874951 (Pool: 98873637; Big: 1314); GC: 64 PkgEval terminated after 2736.39s: test duration exceeded the time limit