Package evaluation to test DCAUtils on Julia 1.12.4 (0f21d93eaa*) started at 2026-01-26T17:41:58.834


################################################################################
# Set-up
#

Installing PkgEval dependencies (TestEnv)...
  Activating project at `~/.julia/environments/v1.12`

Set-up completed after 8.33s


################################################################################
# Installation
#

Installing DCAUtils...
   Resolving package versions...
    Updating `~/.julia/environments/v1.12/Project.toml`
  [e41cd558] + DCAUtils v1.1.0
    Updating `~/.julia/environments/v1.12/Manifest.toml`
  [e41cd558] + DCAUtils v1.1.0
  [a0c94c4b] + FastaIO v1.1.0
  [92fee26a] + GZip v0.6.2
  [56f22d72] + Artifacts v1.11.0
  [8f399da3] + Libdl v1.11.0
  [37e2e46d] + LinearAlgebra v1.12.0
  [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1
  [4536629a] + OpenBLAS_jll v0.3.29+0
  [83775a58] + Zlib_jll v1.3.1+2
  [8e850b90] + libblastrampoline_jll v5.15.0+0

Installation completed after 1.34s


################################################################################
# Precompilation
#

Precompiling PkgEval dependencies...

Precompiling package dependencies...
Precompiling packages...
   1429.8 ms  ✓ DCAUtils
  1 dependency successfully precompiled in 2 seconds. 41 already precompiled.

Precompilation completed after 14.6s


################################################################################
# Testing
#

     Testing DCAUtils
      Status `/tmp/jl_n57Lu0/Project.toml`
  [e41cd558] DCAUtils v1.1.0
⌅ [033835bb] JLD2 v0.4.55
  [4af54fe1] LazyArtifacts v1.11.0
  [37e2e46d] LinearAlgebra v1.12.0
  [8dfed614] Test v1.11.0
      Status `/tmp/jl_n57Lu0/Manifest.toml`
  [e41cd558] DCAUtils v1.1.0
  [a0c94c4b] FastaIO v1.1.0
  [5789e2e9] FileIO v1.17.1
  [92fee26a] GZip v0.6.2
⌅ [033835bb] JLD2 v0.4.55
  [1914dd2f] MacroTools v0.5.16
  [bac558e1] OrderedCollections v1.8.1
  [aea7be01] PrecompileTools v1.3.3
  [21216c6a] Preferences v1.5.1
  [ae029012] Requires v1.3.1
  [3bb67fe8] TranscodingStreams v0.11.3
  [0dad84c5] ArgTools v1.1.2
  [56f22d72] Artifacts v1.11.0
  [2a0f44e3] Base64 v1.11.0
  [ade2ca70] Dates v1.11.0
  [f43a241f] Downloads v1.7.0
  [7b1f6079] FileWatching v1.11.0
  [b77e0a4c] InteractiveUtils v1.11.0
  [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0
  [4af54fe1] LazyArtifacts v1.11.0
  [b27032c2] LibCURL v0.6.4
  [76f85450] LibGit2 v1.11.0
  [8f399da3] Libdl v1.11.0
  [37e2e46d] LinearAlgebra v1.12.0
  [56ddb016] Logging v1.11.0
  [d6f4376e] Markdown v1.11.0
  [a63ad114] Mmap v1.11.0
  [ca575930] NetworkOptions v1.3.0
  [44cfe95a] Pkg v1.12.1
  [de0858da] Printf v1.11.0
  [9a3f8284] Random v1.11.0
  [ea8e919c] SHA v0.7.0
  [9e88b42a] Serialization v1.11.0
  [f489334b] StyledStrings v1.11.0
  [fa267f1f] TOML v1.0.3
  [a4e569a6] Tar v1.10.0
  [8dfed614] Test v1.11.0
  [cf7118a7] UUIDs v1.11.0
  [4ec0a83e] Unicode v1.11.0
  [e66e0078] CompilerSupportLibraries_jll v1.3.0+1
  [deac9b47] LibCURL_jll v8.15.0+0
  [e37daf67] LibGit2_jll v1.9.0+0
  [29816b5a] LibSSH2_jll v1.11.3+1
  [14a3606d] MozillaCACerts_jll v2025.11.4
  [4536629a] OpenBLAS_jll v0.3.29+0
  [458c3c95] OpenSSL_jll v3.5.4+0
  [83775a58] Zlib_jll v1.3.1+2
  [8e850b90] libblastrampoline_jll v5.15.0+0
  [8e850ede] nghttp2_jll v1.64.0+1
  [3f19e933] p7zip_jll v17.7.0+0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading.
     Testing Running tests...
[ Info: Loading results data
[ Info: Attempting to dynamically load CodecZlib
ERROR: LoadError: ArgumentError: Package CodecZlib not found in current path.
- Run `import Pkg; Pkg.add("CodecZlib")` to install the CodecZlib package.
Stacktrace:
  [1] macro expansion
    @ ./loading.jl:2403 [inlined]
  [2] macro expansion
    @ ./lock.jl:376 [inlined]
  [3] __require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2386
  [4] require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2362
  [5] eval(m::Module, e::Any)
    @ Core ./boot.jl:489
  [6] (::JLD2.var"#checked_import##0#checked_import##1"{Symbol})()
    @ JLD2 ~/.julia/packages/JLD2/ws7Qu/src/compression.jl:43
  [7] lock(f::JLD2.var"#checked_import##0#checked_import##1"{Symbol}, l::ReentrantLock)
    @ Base ./lock.jl:335
  [8] get_decompressor(filters::JLD2.FilterPipeline)
    @ JLD2 ~/.julia/packages/JLD2/ws7Qu/src/compression.jl:106
  [9] read_compressed_array!(v::Matrix{Float64}, f::JLD2.JLDFile{JLD2.MmapIO}, rr::JLD2.ReadRepresentation{Float64, Float64}, data_length::Int64, filters::JLD2.FilterPipeline)
    @ JLD2 ~/.julia/packages/JLD2/ws7Qu/src/compression.jl:219
 [10] read_array(f::JLD2.JLDFile{JLD2.MmapIO}, dataspace::JLD2.ReadDataspace, rr::JLD2.ReadRepresentation, layout::JLD2.DataLayout, filters::JLD2.FilterPipeline, header_offset::JLD2.RelOffset, attributes::Vector{JLD2.ReadAttribute})
    @ JLD2 ~/.julia/packages/JLD2/ws7Qu/src/datasets.jl:248
 [11] read_data(f::JLD2.JLDFile{JLD2.MmapIO}, rr::Any, read_dataspace::Tuple{JLD2.ReadDataspace, JLD2.RelOffset, JLD2.DataLayout, JLD2.FilterPipeline}, attributes::Vector{JLD2.ReadAttribute})
    @ JLD2 ~/.julia/packages/JLD2/ws7Qu/src/datasets.jl:100
 [12] read_data(f::JLD2.JLDFile{JLD2.MmapIO}, dataspace::JLD2.ReadDataspace, dt::JLD2.H5Datatype, layout::JLD2.DataLayout, filters::JLD2.FilterPipeline, header_offset::JLD2.RelOffset, attributes::Vector{JLD2.ReadAttribute})
    @ JLD2 ~/.julia/packages/JLD2/ws7Qu/src/datasets.jl:86
 [13] load_dataset(f::JLD2.JLDFile{JLD2.MmapIO}, offset::JLD2.RelOffset)
    @ JLD2 ~/.julia/packages/JLD2/ws7Qu/src/datasets.jl:4
 [14] jlconvert(::JLD2.ReadRepresentation{Matrix{Float64}, JLD2.RelOffset}, f::JLD2.JLDFile{JLD2.MmapIO}, ptr::Ptr{Nothing}, ::JLD2.RelOffset)
    @ JLD2 ~/.julia/packages/JLD2/ws7Qu/src/data/writing_datatypes.jl:320
 [15] macro expansion
    @ ~/.julia/packages/JLD2/ws7Qu/src/data/reconstructing_datatypes.jl:781 [inlined]
 [16] jlconvert(::JLD2.ReadRepresentation{Pair{Tuple{Float64, Bool, Any, Float64}, Matrix{Float64}}, JLD2.OnDiskRepresentation{(0, 8), Tuple{Tuple{Float64, Bool, Any, Float64}, Matrix{Float64}}, Tuple{JLD2.RelOffset, JLD2.RelOffset}, 16}()}, f::JLD2.JLDFile{JLD2.MmapIO}, ptr::Ptr{Nothing}, header_offset::JLD2.RelOffset)
    @ JLD2 ~/.julia/packages/JLD2/ws7Qu/src/data/reconstructing_datatypes.jl:700
 [17] read_scalar(f::JLD2.JLDFile{JLD2.MmapIO}, rr::Any, header_offset::JLD2.RelOffset)
    @ JLD2 ~/.julia/packages/JLD2/ws7Qu/src/dataio.jl:37
 [18] read_data(f::JLD2.JLDFile{JLD2.MmapIO}, rr::Any, read_dataspace::Tuple{JLD2.ReadDataspace, JLD2.RelOffset, JLD2.DataLayout, JLD2.FilterPipeline}, attributes::Vector{JLD2.ReadAttribute})
    @ JLD2 ~/.julia/packages/JLD2/ws7Qu/src/datasets.jl:98
 [19] read_data(f::JLD2.JLDFile{JLD2.MmapIO}, dataspace::JLD2.ReadDataspace, dt::JLD2.H5Datatype, layout::JLD2.DataLayout, filters::JLD2.FilterPipeline, header_offset::JLD2.RelOffset, attributes::Vector{JLD2.ReadAttribute})
    @ JLD2 ~/.julia/packages/JLD2/ws7Qu/src/datasets.jl:86
 [20] load_dataset(f::JLD2.JLDFile{JLD2.MmapIO}, offset::JLD2.RelOffset)
    @ JLD2 ~/.julia/packages/JLD2/ws7Qu/src/datasets.jl:4
 [21] jlconvert(::JLD2.ReadRepresentation{Pair{Tuple{Float64, Bool, Any, Float64}, Matrix{Float64}}, JLD2.RelOffset}, f::JLD2.JLDFile{JLD2.MmapIO}, ptr::Ptr{Nothing}, ::JLD2.RelOffset)
    @ JLD2 ~/.julia/packages/JLD2/ws7Qu/src/data/writing_datatypes.jl:320
 [22] macro expansion
    @ ~/.julia/packages/JLD2/ws7Qu/src/dataio.jl:70 [inlined]
 [23] macro expansion
    @ ./simdloop.jl:77 [inlined]
 [24] read_array!(v::Vector{Pair{Tuple{Float64, Bool, Any, Float64}, Matrix{Float64}}}, f::JLD2.JLDFile{JLD2.MmapIO}, rr::JLD2.ReadRepresentation{Pair{Tuple{Float64, Bool, Any, Float64}, Matrix{Float64}}, JLD2.RelOffset})
    @ JLD2 ~/.julia/packages/JLD2/ws7Qu/src/dataio.jl:68
 [25] read_array(f::JLD2.JLDFile{JLD2.MmapIO}, dataspace::JLD2.ReadDataspace, rr::JLD2.ReadRepresentation, layout::JLD2.DataLayout, filters::JLD2.FilterPipeline, header_offset::JLD2.RelOffset, attributes::Vector{JLD2.ReadAttribute})
    @ JLD2 ~/.julia/packages/JLD2/ws7Qu/src/datasets.jl:250
 [26] read_data(f::JLD2.JLDFile{JLD2.MmapIO}, rr::JLD2.ReadRepresentation{Any, JLD2.RelOffset}, read_dataspace::Tuple{JLD2.ReadDataspace, JLD2.RelOffset, JLD2.DataLayout, JLD2.FilterPipeline}, attributes::Vector{JLD2.ReadAttribute})
    @ JLD2 ~/.julia/packages/JLD2/ws7Qu/src/datasets.jl:136
 [27] read_data(f::JLD2.JLDFile{JLD2.MmapIO}, dataspace::JLD2.ReadDataspace, dt::JLD2.H5Datatype, layout::JLD2.DataLayout, filters::JLD2.FilterPipeline, header_offset::JLD2.RelOffset, attributes::Vector{JLD2.ReadAttribute})
    @ JLD2 ~/.julia/packages/JLD2/ws7Qu/src/datasets.jl:86
 [28] load_dataset(f::JLD2.JLDFile{JLD2.MmapIO}, offset::JLD2.RelOffset)
    @ JLD2 ~/.julia/packages/JLD2/ws7Qu/src/datasets.jl:4
 [29] jlconvert(::JLD2.ReadRepresentation{Dict{Tuple{Float64, Bool, Any, Float64}, Matrix{Float64}}, JLD2.CustomSerialization{Array, JLD2.RelOffset}}, f::JLD2.JLDFile{JLD2.MmapIO}, ptr::Ptr{Nothing}, header_offset::JLD2.RelOffset)
    @ JLD2 ~/.julia/packages/JLD2/ws7Qu/src/data/custom_serialization.jl:60
 [30] read_scalar(f::JLD2.JLDFile{JLD2.MmapIO}, rr::Any, header_offset::JLD2.RelOffset)
    @ JLD2 ~/.julia/packages/JLD2/ws7Qu/src/dataio.jl:37
 [31] read_data(f::JLD2.JLDFile{JLD2.MmapIO}, rr::Any, read_dataspace::Tuple{JLD2.ReadDataspace, JLD2.RelOffset, JLD2.DataLayout, JLD2.FilterPipeline}, attributes::Vector{JLD2.ReadAttribute})
    @ JLD2 ~/.julia/packages/JLD2/ws7Qu/src/datasets.jl:98
--- the above 20 lines are repeated 1 more time ---
 [52] read_data(f::JLD2.JLDFile{JLD2.MmapIO}, dataspace::JLD2.ReadDataspace, dt::JLD2.H5Datatype, layout::JLD2.DataLayout, filters::JLD2.FilterPipeline, header_offset::JLD2.RelOffset, attributes::Vector{JLD2.ReadAttribute})
    @ JLD2 ~/.julia/packages/JLD2/ws7Qu/src/datasets.jl:86
 [53] load_dataset(f::JLD2.JLDFile{JLD2.MmapIO}, offset::JLD2.RelOffset)
    @ JLD2 ~/.julia/packages/JLD2/ws7Qu/src/datasets.jl:4
 [54] jlconvert
    @ ~/.julia/packages/JLD2/ws7Qu/src/data/writing_datatypes.jl:320 [inlined]
 [55] macro expansion
    @ ~/.julia/packages/JLD2/ws7Qu/src/data/reconstructing_datatypes.jl:781 [inlined]
 [56] jlconvert(::JLD2.ReadRepresentation{Pair{String, Any}, JLD2.OnDiskRepresentation{(0, 16), Tuple{String, Any}, Tuple{JLD2.Vlen{String}, JLD2.RelOffset}, 24}()}, f::JLD2.JLDFile{JLD2.MmapIO}, ptr::Ptr{Nothing}, header_offset::JLD2.RelOffset)
    @ JLD2 ~/.julia/packages/JLD2/ws7Qu/src/data/reconstructing_datatypes.jl:700
 [57] read_scalar(f::JLD2.JLDFile{JLD2.MmapIO}, rr::Any, header_offset::JLD2.RelOffset)
    @ JLD2 ~/.julia/packages/JLD2/ws7Qu/src/dataio.jl:37
 [58] read_data(f::JLD2.JLDFile{JLD2.MmapIO}, rr::Any, read_dataspace::Tuple{JLD2.ReadDataspace, JLD2.RelOffset, JLD2.DataLayout, JLD2.FilterPipeline}, attributes::Vector{JLD2.ReadAttribute})
    @ JLD2 ~/.julia/packages/JLD2/ws7Qu/src/datasets.jl:98
 [59] read_data(f::JLD2.JLDFile{JLD2.MmapIO}, dataspace::JLD2.ReadDataspace, dt::JLD2.H5Datatype, layout::JLD2.DataLayout, filters::JLD2.FilterPipeline, header_offset::JLD2.RelOffset, attributes::Vector{JLD2.ReadAttribute})
    @ JLD2 ~/.julia/packages/JLD2/ws7Qu/src/datasets.jl:86
 [60] load_dataset(f::JLD2.JLDFile{JLD2.MmapIO}, offset::JLD2.RelOffset)
    @ JLD2 ~/.julia/packages/JLD2/ws7Qu/src/datasets.jl:4
 [61] jlconvert(::JLD2.ReadRepresentation{Pair{String, Any}, JLD2.RelOffset}, f::JLD2.JLDFile{JLD2.MmapIO}, ptr::Ptr{Nothing}, ::JLD2.RelOffset)
    @ JLD2 ~/.julia/packages/JLD2/ws7Qu/src/data/writing_datatypes.jl:320
 [62] macro expansion
    @ ~/.julia/packages/JLD2/ws7Qu/src/dataio.jl:70 [inlined]
 [63] macro expansion
    @ ./simdloop.jl:77 [inlined]
 [64] read_array!(v::Vector{Pair{String, Any}}, f::JLD2.JLDFile{JLD2.MmapIO}, rr::JLD2.ReadRepresentation{Pair{String, Any}, JLD2.RelOffset})
    @ JLD2 ~/.julia/packages/JLD2/ws7Qu/src/dataio.jl:68
 [65] read_array(f::JLD2.JLDFile{JLD2.MmapIO}, dataspace::JLD2.ReadDataspace, rr::JLD2.ReadRepresentation, layout::JLD2.DataLayout, filters::JLD2.FilterPipeline, header_offset::JLD2.RelOffset, attributes::Vector{JLD2.ReadAttribute})
    @ JLD2 ~/.julia/packages/JLD2/ws7Qu/src/datasets.jl:250
 [66] read_data(f::JLD2.JLDFile{JLD2.MmapIO}, rr::JLD2.ReadRepresentation{Any, JLD2.RelOffset}, read_dataspace::Tuple{JLD2.ReadDataspace, JLD2.RelOffset, JLD2.DataLayout, JLD2.FilterPipeline}, attributes::Vector{JLD2.ReadAttribute})
    @ JLD2 ~/.julia/packages/JLD2/ws7Qu/src/datasets.jl:136
 [67] read_data(f::JLD2.JLDFile{JLD2.MmapIO}, dataspace::JLD2.ReadDataspace, dt::JLD2.H5Datatype, layout::JLD2.DataLayout, filters::JLD2.FilterPipeline, header_offset::JLD2.RelOffset, attributes::Vector{JLD2.ReadAttribute})
    @ JLD2 ~/.julia/packages/JLD2/ws7Qu/src/datasets.jl:86
 [68] load_dataset(f::JLD2.JLDFile{JLD2.MmapIO}, offset::JLD2.RelOffset)
    @ JLD2 ~/.julia/packages/JLD2/ws7Qu/src/datasets.jl:4
 [69] jlconvert(::JLD2.ReadRepresentation{Dict{String, Any}, JLD2.CustomSerialization{Array, JLD2.RelOffset}}, f::JLD2.JLDFile{JLD2.MmapIO}, ptr::Ptr{Nothing}, header_offset::JLD2.RelOffset)
    @ JLD2 ~/.julia/packages/JLD2/ws7Qu/src/data/custom_serialization.jl:60
 [70] read_scalar(f::JLD2.JLDFile{JLD2.MmapIO}, rr::Any, header_offset::JLD2.RelOffset)
    @ JLD2 ~/.julia/packages/JLD2/ws7Qu/src/dataio.jl:37
 [71] read_data(f::JLD2.JLDFile{JLD2.MmapIO}, rr::Any, read_dataspace::Tuple{JLD2.ReadDataspace, JLD2.RelOffset, JLD2.DataLayout, JLD2.FilterPipeline}, attributes::Vector{JLD2.ReadAttribute})
    @ JLD2 ~/.julia/packages/JLD2/ws7Qu/src/datasets.jl:98
 [72] read_data(f::JLD2.JLDFile{JLD2.MmapIO}, dataspace::JLD2.ReadDataspace, dt::JLD2.H5Datatype, layout::JLD2.DataLayout, filters::JLD2.FilterPipeline, header_offset::JLD2.RelOffset, attributes::Vector{JLD2.ReadAttribute})
    @ JLD2 ~/.julia/packages/JLD2/ws7Qu/src/datasets.jl:86
 [73] load_dataset(f::JLD2.JLDFile{JLD2.MmapIO}, offset::JLD2.RelOffset)
    @ JLD2 ~/.julia/packages/JLD2/ws7Qu/src/datasets.jl:4
 [74] getindex(g::JLD2.Group{JLD2.JLDFile{JLD2.MmapIO}}, name::String)
    @ JLD2 ~/.julia/packages/JLD2/ws7Qu/src/groups.jl:99
 [75] read
    @ ~/.julia/packages/JLD2/ws7Qu/src/JLD2.jl:368 [inlined]
 [76] (::Main.DCAUtilsTests.var"#2#3")(f::JLD2.JLDFile{JLD2.MmapIO})
    @ Main.DCAUtilsTests ~/.julia/packages/JLD2/ws7Qu/src/loadsave.jl:153
 [77] jldopen(f::Function, args::String; kws::@Kwargs{})
    @ JLD2 ~/.julia/packages/JLD2/ws7Qu/src/loadsave.jl:4
 [78] jldopen(f::Function, args::String)
    @ JLD2 ~/.julia/packages/JLD2/ws7Qu/src/loadsave.jl:1
 [79] top-level scope
    @ ~/.julia/packages/DCAUtils/kq0WV/test/runtests.jl:14
 [80] macro expansion
    @ ~/.julia/packages/JLD2/ws7Qu/src/loadsave.jl:152 [inlined]
 [81] include(mapexpr::Function, mod::Module, _path::String)
    @ Base ./Base.jl:307
 [82] top-level scope
    @ none:6
 [83] eval(m::Module, e::Any)
    @ Core ./boot.jl:489
 [84] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:283
in expression starting at /home/pkgeval/.julia/packages/DCAUtils/kq0WV/test/runtests.jl:1

Testing failed after 66.03s

ERROR: LoadError: Package DCAUtils errored during testing
Stacktrace:
  [1] pkgerror(msg::String)
    @ Pkg.Types /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Types.jl:68
  [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool)
    @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2535
  [3] test
    @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2384 [inlined]
  [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:538
  [5] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:169
  [6] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:157
  [7] test
    @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:157 [inlined]
  [8] #test#81
    @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:156 [inlined]
  [9] top-level scope
    @ /PkgEval.jl/scripts/evaluate.jl:223
 [10] include(mod::Module, _path::String)
    @ Base ./Base.jl:306
 [11] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:317
 [12] _start()
    @ Base ./client.jl:550
in expression starting at /PkgEval.jl/scripts/evaluate.jl:214

PkgEval failed after 106.22s: package is using an unknown package