Package evaluation to test CherenkovDeconvolution on Julia 1.12.4 (0f21d93eaa*) started at 2026-01-27T03:47:08.650 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.12` Set-up completed after 7.75s ################################################################################ # Installation # Installing CherenkovDeconvolution... Resolving package versions... Installed Conda ── v1.10.3 Installed PyCall ─ v1.94.1 Updating `~/.julia/environments/v1.12/Project.toml` [7995dc16] + CherenkovDeconvolution v0.3.0 Updating `~/.julia/environments/v1.12/Manifest.toml` [47edcb42] + ADTypes v1.21.0 [79e6a3ab] + Adapt v4.4.0 [4fba245c] + ArrayInterface v7.22.0 [7995dc16] + CherenkovDeconvolution v0.3.0 [bbf7d656] + CommonSubexpressions v0.3.1 [34da2185] + Compat v4.18.1 [8f4d0f93] + Conda v1.10.3 [187b0558] + ConstructionBase v1.6.0 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.8.1 ⌅ [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [a0c0ee7d] + DifferentiationInterface v0.7.15 [6e83dbb3] + Discretizers v3.2.4 [ffbed154] + DocStringExtensions v0.9.5 [4e289a0a] + EnumX v1.0.6 [1a297f60] + FillArrays v1.16.0 [6a86dc24] + FiniteDiff v2.29.0 [f6369f11] + ForwardDiff v1.3.1 [842dd82b] + InlineStrings v1.4.5 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.6 [c8e1da08] + IterTools v1.10.0 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 [682c06a0] + JSON v1.4.0 [b964fa9f] + LaTeXStrings v1.4.0 ⌃ [d3d80556] + LineSearches v7.5.1 [2ab3a3ac] + LogExpFunctions v0.3.29 [1914dd2f] + MacroTools v0.5.16 [e1d29d7a] + Missings v1.2.0 [d8a4904e] + MutableArithmetics v1.6.7 ⌅ [d41bc354] + NLSolversBase v7.10.0 [77ba4419] + NaNMath v1.1.3 ⌅ [429524aa] + Optim v1.13.3 [bac558e1] + OrderedCollections v1.8.1 [d96e819e] + Parameters v0.12.3 [69de0a69] + Parsers v2.8.3 ⌅ [f27b6e38] + Polynomials v3.1.8 [2dfb63ee] + PooledArrays v1.4.3 [85a6dd25] + PositiveFactorizations v0.2.4 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.1 [08abe8d2] + PrettyTables v3.1.2 ⌅ [438e738f] + PyCall v1.94.1 [3cdcf5f2] + RecipesBase v1.3.4 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 ⌅ [3646fa90] + ScikitLearn v0.6.6 [6e75b9c4] + ScikitLearnBase v0.5.0 [91c51154] + SentinelArrays v1.4.9 [efcf1570] + Setfield v1.1.2 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.6.1 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 ⌅ [2913bbd2] + StatsBase v0.33.21 [892a3eda] + StringManipulation v0.4.2 [ec057cc2] + StructUtils v2.6.2 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [3a884ed6] + UnPack v1.0.2 [81def892] + VersionParsing v1.3.0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [b27032c2] + LibCURL v0.6.4 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [ca575930] + NetworkOptions v1.3.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.15.0+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.11.4 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [bea87d4a] + SuiteSparse_jll v7.8.3+2 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.64.0+1 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Building Conda ─→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/8f06b0cfa4c514c7b9546756dbae91fcfbc92dc9/build.log` Building PyCall → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/53b8b07b721b77144a0fbbbc2675222ebf40a02d/build.log` Installation completed after 62.39s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompiling packages... 8609.4 ms ✓ Polynomials ✗ PyCall ✗ ScikitLearn ✗ CherenkovDeconvolution 1 dependency successfully precompiled in 43 seconds. 123 already precompiled. 1 dependency had output during precompilation: ┌ Polynomials │ WARNING: Constructor for type "Symbol" was extended in `Polynomials` without explicit qualification or import. │ NOTE: Assumed "Symbol" refers to `Base.Symbol`. This behavior is deprecated and may differ in future versions.` │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Symbol end`. │ Hint: To silence the warning, qualify `Symbol` as `Base.Symbol` in the method signature or explicitly `import Base: Symbol`. └ ERROR: LoadError: The following 3 direct dependencies failed to precompile: CherenkovDeconvolution Failed to precompile CherenkovDeconvolution [7995dc16-b5cc-11e8-32a0-21341f07e0b5] to "/home/pkgeval/.julia/compiled/v1.12/CherenkovDeconvolution/jl_q23kmy". ERROR: LoadError: ArgumentError: Source type for `reinterpret` must be isbits Stacktrace: [1] _reinterpret @ ./reinterpretarray.jl:856 [inlined] [2] reinterpret @ ./essentials.jl:736 [inlined] [3] _preserveas!(dest::Vector{UInt8}, ::Type{Cwstring}, x::String) @ PyCall ~/.julia/packages/PyCall/ygXW2/deps/depsutils.jl:67 [4] Py_SetPythonHome(libpy::Ptr{Nothing}, pyversion::VersionNumber, PYTHONHOME::String) @ PyCall ~/.julia/packages/PyCall/ygXW2/deps/depsutils.jl:36 [5] top-level scope @ ~/.julia/packages/PyCall/ygXW2/src/startup.jl:57 [6] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:307 [7] top-level scope @ ~/.julia/packages/PyCall/ygXW2/src/PyCall.jl:38 [8] include(mod::Module, _path::String) @ Base ./Base.jl:306 [9] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3024 [10] top-level scope @ stdin:5 [11] eval(m::Module, e::Any) @ Core ./boot.jl:489 [12] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2870 [13] include_string @ ./loading.jl:2880 [inlined] [14] exec_options(opts::Base.JLOptions) @ Base ./client.jl:315 [15] _start() @ Base ./client.jl:550 in expression starting at /home/pkgeval/.julia/packages/PyCall/ygXW2/src/startup.jl:41 in expression starting at /home/pkgeval/.julia/packages/PyCall/ygXW2/src/PyCall.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile PyCall [438e738f-606a-5dbb-bf0a-cddfbfd45ab0] to "/home/pkgeval/.julia/compiled/v1.12/PyCall/jl_4e3znF". Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3311 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}})() @ Base ./loading.jl:2679 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:93 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:88 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:114 [7] #invokelatest_gr#232 @ ./reflection.jl:1297 [inlined] [8] invokelatest_gr @ ./reflection.jl:1289 [inlined] [9] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3882 [10] maybe_cachefile_lock @ ./loading.jl:3879 [inlined] [11] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2665 [12] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2493 [13] macro expansion @ ./loading.jl:2421 [inlined] [14] macro expansion @ ./lock.jl:376 [inlined] [15] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2386 [16] require(into::Module, mod::Symbol) @ Base ./loading.jl:2362 [17] top-level scope @ ~/.julia/packages/ScikitLearn/Wvn7B/src/Skcore.jl:11 [18] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:307 [19] top-level scope @ ~/.julia/packages/ScikitLearn/Wvn7B/src/ScikitLearn.jl:12 [20] include(mod::Module, _path::String) @ Base ./Base.jl:306 [21] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3024 [22] top-level scope @ stdin:5 [23] eval(m::Module, e::Any) @ Core ./boot.jl:489 [24] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2870 [25] include_string @ ./loading.jl:2880 [inlined] [26] exec_options(opts::Base.JLOptions) @ Base ./client.jl:315 [27] _start() @ Base ./client.jl:550 in expression starting at /home/pkgeval/.julia/packages/ScikitLearn/Wvn7B/src/Skcore.jl:5 in expression starting at /home/pkgeval/.julia/packages/ScikitLearn/Wvn7B/src/ScikitLearn.jl:10 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile ScikitLearn [3646fa90-6ef7-5e7e-9f22-8aca16db6324] to "/home/pkgeval/.julia/compiled/v1.12/ScikitLearn/jl_Pk4OQe". Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3311 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}})() @ Base ./loading.jl:2679 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:93 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:88 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:114 [7] #invokelatest_gr#232 @ ./reflection.jl:1297 [inlined] [8] invokelatest_gr @ ./reflection.jl:1289 [inlined] [9] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3882 [10] maybe_cachefile_lock @ ./loading.jl:3879 [inlined] [11] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2665 [12] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2493 [13] macro expansion @ ./loading.jl:2421 [inlined] [14] macro expansion @ ./lock.jl:376 [inlined] [15] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2386 [16] require(into::Module, mod::Symbol) @ Base ./loading.jl:2362 [17] top-level scope @ ~/.julia/packages/CherenkovDeconvolution/Mui86/src/DeconvUtil.jl:24 [18] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:307 [19] top-level scope @ ~/.julia/packages/CherenkovDeconvolution/Mui86/src/CherenkovDeconvolution.jl:26 [20] include(mod::Module, _path::String) @ Base ./Base.jl:306 [21] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3024 [22] top-level scope @ stdin:5 [23] eval(m::Module, e::Any) @ Core ./boot.jl:489 [24] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2870 [25] include_string @ ./loading.jl:2880 [inlined] [26] exec_options(opts::Base.JLOptions) @ Base ./client.jl:315 [27] _start() @ Base ./client.jl:550 in expression starting at /home/pkgeval/.julia/packages/CherenkovDeconvolution/Mui86/src/DeconvUtil.jl:22 in expression starting at /home/pkgeval/.julia/packages/CherenkovDeconvolution/Mui86/src/CherenkovDeconvolution.jl:22 in expression starting at stdin:5 PyCall Failed to precompile PyCall [438e738f-606a-5dbb-bf0a-cddfbfd45ab0] to "/home/pkgeval/.julia/compiled/v1.12/PyCall/jl_FmXpdi". ERROR: LoadError: ArgumentError: Source type for `reinterpret` must be isbits Stacktrace: [1] _reinterpret @ ./reinterpretarray.jl:856 [inlined] [2] reinterpret @ ./essentials.jl:736 [inlined] [3] _preserveas!(dest::Vector{UInt8}, ::Type{Cwstring}, x::String) @ PyCall ~/.julia/packages/PyCall/ygXW2/deps/depsutils.jl:67 [4] Py_SetPythonHome(libpy::Ptr{Nothing}, pyversion::VersionNumber, PYTHONHOME::String) @ PyCall ~/.julia/packages/PyCall/ygXW2/deps/depsutils.jl:36 [5] top-level scope @ ~/.julia/packages/PyCall/ygXW2/src/startup.jl:57 [6] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:307 [7] top-level scope @ ~/.julia/packages/PyCall/ygXW2/src/PyCall.jl:38 [8] include(mod::Module, _path::String) @ Base ./Base.jl:306 [9] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3024 [10] top-level scope @ stdin:5 [11] eval(m::Module, e::Any) @ Core ./boot.jl:489 [12] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2870 [13] include_string @ ./loading.jl:2880 [inlined] [14] exec_options(opts::Base.JLOptions) @ Base ./client.jl:315 [15] _start() @ Base ./client.jl:550 in expression starting at /home/pkgeval/.julia/packages/PyCall/ygXW2/src/startup.jl:41 in expression starting at /home/pkgeval/.julia/packages/PyCall/ygXW2/src/PyCall.jl:1 in expression starting at stdin:5 ScikitLearn Failed to precompile ScikitLearn [3646fa90-6ef7-5e7e-9f22-8aca16db6324] to "/home/pkgeval/.julia/compiled/v1.12/ScikitLearn/jl_ykS2Wc". ERROR: LoadError: ArgumentError: Source type for `reinterpret` must be isbits Stacktrace: [1] _reinterpret @ ./reinterpretarray.jl:856 [inlined] [2] reinterpret @ ./essentials.jl:736 [inlined] [3] _preserveas!(dest::Vector{UInt8}, ::Type{Cwstring}, x::String) @ PyCall ~/.julia/packages/PyCall/ygXW2/deps/depsutils.jl:67 [4] Py_SetPythonHome(libpy::Ptr{Nothing}, pyversion::VersionNumber, PYTHONHOME::String) @ PyCall ~/.julia/packages/PyCall/ygXW2/deps/depsutils.jl:36 [5] top-level scope @ ~/.julia/packages/PyCall/ygXW2/src/startup.jl:57 [6] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:307 [7] top-level scope @ ~/.julia/packages/PyCall/ygXW2/src/PyCall.jl:38 [8] include(mod::Module, _path::String) @ Base ./Base.jl:306 [9] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3024 [10] top-level scope @ stdin:5 [11] eval(m::Module, e::Any) @ Core ./boot.jl:489 [12] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2870 [13] include_string @ ./loading.jl:2880 [inlined] [14] exec_options(opts::Base.JLOptions) @ Base ./client.jl:315 [15] _start() @ Base ./client.jl:550 in expression starting at /home/pkgeval/.julia/packages/PyCall/ygXW2/src/startup.jl:41 in expression starting at /home/pkgeval/.julia/packages/PyCall/ygXW2/src/PyCall.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile PyCall [438e738f-606a-5dbb-bf0a-cddfbfd45ab0] to "/home/pkgeval/.julia/compiled/v1.12/PyCall/jl_pPZ1L1". Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3311 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}})() @ Base ./loading.jl:2679 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:93 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:88 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:114 [7] #invokelatest_gr#232 @ ./reflection.jl:1297 [inlined] [8] invokelatest_gr @ ./reflection.jl:1289 [inlined] [9] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3882 [10] maybe_cachefile_lock @ ./loading.jl:3879 [inlined] [11] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2665 [12] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2493 [13] macro expansion @ ./loading.jl:2421 [inlined] [14] macro expansion @ ./lock.jl:376 [inlined] [15] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2386 [16] require(into::Module, mod::Symbol) @ Base ./loading.jl:2362 [17] top-level scope @ ~/.julia/packages/ScikitLearn/Wvn7B/src/Skcore.jl:11 [18] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:307 [19] top-level scope @ ~/.julia/packages/ScikitLearn/Wvn7B/src/ScikitLearn.jl:12 [20] include(mod::Module, _path::String) @ Base ./Base.jl:306 [21] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3024 [22] top-level scope @ stdin:5 [23] eval(m::Module, e::Any) @ Core ./boot.jl:489 [24] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2870 [25] include_string @ ./loading.jl:2880 [inlined] [26] exec_options(opts::Base.JLOptions) @ Base ./client.jl:315 [27] _start() @ Base ./client.jl:550 in expression starting at /home/pkgeval/.julia/packages/ScikitLearn/Wvn7B/src/Skcore.jl:5 in expression starting at /home/pkgeval/.julia/packages/ScikitLearn/Wvn7B/src/ScikitLearn.jl:10 in expression starting at stdin:5 in expression starting at /PkgEval.jl/scripts/precompile.jl:34 Precompilation failed after 60.51s ################################################################################ # Testing # Testing CherenkovDeconvolution Status `/tmp/jl_kBtcTz/Project.toml` [7995dc16] CherenkovDeconvolution v0.3.0 [a93c6f00] DataFrames v1.8.1 [6e83dbb3] Discretizers v3.2.4 [b4f34e82] Distances v0.10.12 [cc2ba9b6] MLDataUtils v0.5.4 [0db19996] NBInclude v2.4.0 ⌅ [429524aa] Optim v1.13.3 ⌅ [f27b6e38] Polynomials v3.1.8 ⌅ [438e738f] PyCall v1.94.1 ⌅ [3646fa90] ScikitLearn v0.6.6 [6e75b9c4] ScikitLearnBase v0.5.0 [10745b16] Statistics v1.11.1 ⌅ [2913bbd2] StatsBase v0.33.21 [ddb6d928] YAML v0.4.16 [37e2e46d] LinearAlgebra v1.12.0 [9a3f8284] Random v1.11.0 [2f01184e] SparseArrays v1.12.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_kBtcTz/Manifest.toml` [47edcb42] ADTypes v1.21.0 [79e6a3ab] Adapt v4.4.0 [4fba245c] ArrayInterface v7.22.0 [7995dc16] CherenkovDeconvolution v0.3.0 [bbf7d656] CommonSubexpressions v0.3.1 [34da2185] Compat v4.18.1 [8f4d0f93] Conda v1.10.3 [187b0558] ConstructionBase v1.6.0 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.8.1 ⌅ [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [8bb1440f] DelimitedFiles v1.9.1 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [a0c0ee7d] DifferentiationInterface v0.7.15 [6e83dbb3] Discretizers v3.2.4 [b4f34e82] Distances v0.10.12 [ffbed154] DocStringExtensions v0.9.5 [4e289a0a] EnumX v1.0.6 [1a297f60] FillArrays v1.16.0 [6a86dc24] FiniteDiff v2.29.0 [f6369f11] ForwardDiff v1.3.1 [842dd82b] InlineStrings v1.4.5 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.6 [c8e1da08] IterTools v1.10.0 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.1 [682c06a0] JSON v1.4.0 [b964fa9f] LaTeXStrings v1.4.0 ⌅ [7f8f8fb0] LearnBase v0.3.0 ⌃ [d3d80556] LineSearches v7.5.1 [2ab3a3ac] LogExpFunctions v0.3.29 ⌃ [9920b226] MLDataPattern v0.5.4 [cc2ba9b6] MLDataUtils v0.5.4 [66a33bbf] MLLabelUtils v0.5.7 [1914dd2f] MacroTools v0.5.16 [dbb5928d] MappedArrays v0.4.3 [e1d29d7a] Missings v1.2.0 [d8a4904e] MutableArithmetics v1.6.7 [0db19996] NBInclude v2.4.0 ⌅ [d41bc354] NLSolversBase v7.10.0 [77ba4419] NaNMath v1.1.3 ⌅ [429524aa] Optim v1.13.3 [bac558e1] OrderedCollections v1.8.1 [d96e819e] Parameters v0.12.3 [69de0a69] Parsers v2.8.3 ⌅ [f27b6e38] Polynomials v3.1.8 [2dfb63ee] PooledArrays v1.4.3 [85a6dd25] PositiveFactorizations v0.2.4 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.1 [08abe8d2] PrettyTables v3.1.2 ⌅ [438e738f] PyCall v1.94.1 [3cdcf5f2] RecipesBase v1.3.4 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 ⌅ [3646fa90] ScikitLearn v0.6.6 [6e75b9c4] ScikitLearnBase v0.5.0 [91c51154] SentinelArrays v1.4.9 [efcf1570] Setfield v1.1.2 [b85f4697] SoftGlobalScope v1.1.0 [a2af1166] SortingAlgorithms v1.2.2 [276daf66] SpecialFunctions v2.6.1 [1e83bf80] StaticArraysCore v1.4.4 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.8.0 ⌅ [2913bbd2] StatsBase v0.33.21 [69024149] StringEncodings v0.3.7 [892a3eda] StringManipulation v0.4.2 [ec057cc2] StructUtils v2.6.2 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [3a884ed6] UnPack v1.0.2 [81def892] VersionParsing v1.3.0 [ddb6d928] YAML v0.4.16 [94ce4f54] Libiconv_jll v1.18.0+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [b27032c2] LibCURL v0.6.4 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.12.0 [f489334b] StyledStrings v1.11.0 [fa267f1f] TOML v1.0.3 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.15.0+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.11.4 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.7+0 [458c3c95] OpenSSL_jll v3.5.4+0 [bea87d4a] SuiteSparse_jll v7.8.3+2 [83775a58] Zlib_jll v1.3.1+2 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.64.0+1 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... Precompiling packages... ✗ PyCall ✗ ScikitLearn Info Given CherenkovDeconvolution was explicitly requested, output will be shown live  ERROR: LoadError: ArgumentError: Source type for `reinterpret` must be isbits Stacktrace:  [1] _reinterpret  @ ./reinterpretarray.jl:856 [inlined]  [2] reinterpret  @ ./essentials.jl:736 [inlined]  [3] _preserveas!(dest::Vector{UInt8}, ::Type{Cwstring}, x::String)  @ PyCall ~/.julia/packages/PyCall/ygXW2/deps/depsutils.jl:67  [4] Py_SetPythonHome(libpy::Ptr{Nothing}, pyversion::VersionNumber, PYTHONHOME::String)  @ PyCall ~/.julia/packages/PyCall/ygXW2/deps/depsutils.jl:36  [5] top-level scope  @ ~/.julia/packages/PyCall/ygXW2/src/startup.jl:57  [6] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:307  [7] top-level scope  @ ~/.julia/packages/PyCall/ygXW2/src/PyCall.jl:38  [8] include(mod::Module, _path::String)  @ Base ./Base.jl:306  [9] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String)  @ Base ./loading.jl:3024  [10] top-level scope  @ stdin:5  [11] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [12] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:2870  [13] include_string  @ ./loading.jl:2880 [inlined]  [14] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:315  [15] _start()  @ Base ./client.jl:550 in expression starting at /home/pkgeval/.julia/packages/PyCall/ygXW2/src/startup.jl:41 in expression starting at /home/pkgeval/.julia/packages/PyCall/ygXW2/src/PyCall.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile PyCall [438e738f-606a-5dbb-bf0a-cddfbfd45ab0] to "/home/pkgeval/.julia/compiled/v1.12/PyCall/jl_g6uY63". Stacktrace:  [1] error(s::String)  @ Base ./error.jl:44  [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing)  @ Base ./loading.jl:3311  [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}})()  @ Base ./loading.jl:2679  [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool})  @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:93  [5] #mkpidlock#7  @ /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:88 [inlined]  [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64})  @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:114  [7] #invokelatest_gr#232  @ ./reflection.jl:1297 [inlined]  [8] invokelatest_gr  @ ./reflection.jl:1289 [inlined]  [9] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)  @ Base ./loading.jl:3882  [10] maybe_cachefile_lock  @ ./loading.jl:3879 [inlined]  [11] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2665  [12] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2493  [13] macro expansion  @ ./loading.jl:2421 [inlined]  [14] macro expansion  @ ./lock.jl:376 [inlined]  [15] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2386  [16] require(into::Module, mod::Symbol)  @ Base ./loading.jl:2362  [17] top-level scope  @ ~/.julia/packages/ScikitLearn/Wvn7B/src/Skcore.jl:11  [18] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:307  [19] top-level scope  @ ~/.julia/packages/ScikitLearn/Wvn7B/src/ScikitLearn.jl:12  [20] include(mod::Module, _path::String)  @ Base ./Base.jl:306  [21] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String)  @ Base ./loading.jl:3024  [22] top-level scope  @ stdin:5  [23] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [24] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:2870  [25] include_string  @ ./loading.jl:2880 [inlined]  [26] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:315  [27] _start()  @ Base ./client.jl:550 in expression starting at /home/pkgeval/.julia/packages/ScikitLearn/Wvn7B/src/Skcore.jl:5 in expression starting at /home/pkgeval/.julia/packages/ScikitLearn/Wvn7B/src/ScikitLearn.jl:10 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile ScikitLearn [3646fa90-6ef7-5e7e-9f22-8aca16db6324] to "/home/pkgeval/.julia/compiled/v1.12/ScikitLearn/jl_gqZGy8". Stacktrace:  [1] error(s::String)  @ Base ./error.jl:44  [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing)  @ Base ./loading.jl:3311  [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}})()  @ Base ./loading.jl:2679  [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool})  @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:93  [5] #mkpidlock#7  @ /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:88 [inlined]  [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64})  @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:114  [7] #invokelatest_gr#232  @ ./reflection.jl:1297 [inlined]  [8] invokelatest_gr  @ ./reflection.jl:1289 [inlined]  [9] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)  @ Base ./loading.jl:3882  [10] maybe_cachefile_lock  @ ./loading.jl:3879 [inlined]  [11] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2665  [12] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2493  [13] macro expansion  @ ./loading.jl:2421 [inlined]  [14] macro expansion  @ ./lock.jl:376 [inlined]  [15] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2386  [16] require(into::Module, mod::Symbol)  @ Base ./loading.jl:2362  [17] top-level scope  @ ~/.julia/packages/CherenkovDeconvolution/Mui86/src/DeconvUtil.jl:24  [18] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:307  [19] top-level scope  @ ~/.julia/packages/CherenkovDeconvolution/Mui86/src/CherenkovDeconvolution.jl:26  [20] include(mod::Module, _path::String)  @ Base ./Base.jl:306  [21] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3024  [22] top-level scope  @ stdin:5  [23] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [24] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:2870  [25] include_string  @ ./loading.jl:2880 [inlined]  [26] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:315  [27] _start()  @ Base ./client.jl:550 in expression starting at /home/pkgeval/.julia/packages/CherenkovDeconvolution/Mui86/src/DeconvUtil.jl:22 in expression starting at /home/pkgeval/.julia/packages/CherenkovDeconvolution/Mui86/src/CherenkovDeconvolution.jl:22 in expression starting at stdin:5 ✗ CherenkovDeconvolution 0 dependencies successfully precompiled in 34 seconds. 110 already precompiled. ERROR: LoadError: The following 3 direct dependencies failed to precompile: CherenkovDeconvolution Failed to precompile CherenkovDeconvolution [7995dc16-b5cc-11e8-32a0-21341f07e0b5] to "/home/pkgeval/.julia/compiled/v1.12/CherenkovDeconvolution/jl_oObIbM". ERROR: LoadError: ArgumentError: Source type for `reinterpret` must be isbits Stacktrace: [1] _reinterpret @ ./reinterpretarray.jl:856 [inlined] [2] reinterpret @ ./essentials.jl:736 [inlined] [3] _preserveas!(dest::Vector{UInt8}, ::Type{Cwstring}, x::String) @ PyCall ~/.julia/packages/PyCall/ygXW2/deps/depsutils.jl:67 [4] Py_SetPythonHome(libpy::Ptr{Nothing}, pyversion::VersionNumber, PYTHONHOME::String) @ PyCall ~/.julia/packages/PyCall/ygXW2/deps/depsutils.jl:36 [5] top-level scope @ ~/.julia/packages/PyCall/ygXW2/src/startup.jl:57 [6] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:307 [7] top-level scope @ ~/.julia/packages/PyCall/ygXW2/src/PyCall.jl:38 [8] include(mod::Module, _path::String) @ Base ./Base.jl:306 [9] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3024 [10] top-level scope @ stdin:5 [11] eval(m::Module, e::Any) @ Core ./boot.jl:489 [12] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2870 [13] include_string @ ./loading.jl:2880 [inlined] [14] exec_options(opts::Base.JLOptions) @ Base ./client.jl:315 [15] _start() @ Base ./client.jl:550 in expression starting at /home/pkgeval/.julia/packages/PyCall/ygXW2/src/startup.jl:41 in expression starting at /home/pkgeval/.julia/packages/PyCall/ygXW2/src/PyCall.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile PyCall [438e738f-606a-5dbb-bf0a-cddfbfd45ab0] to "/home/pkgeval/.julia/compiled/v1.12/PyCall/jl_g6uY63". Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3311 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}})() @ Base ./loading.jl:2679 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:93 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:88 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:114 [7] #invokelatest_gr#232 @ ./reflection.jl:1297 [inlined] [8] invokelatest_gr @ ./reflection.jl:1289 [inlined] [9] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3882 [10] maybe_cachefile_lock @ ./loading.jl:3879 [inlined] [11] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2665 [12] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2493 [13] macro expansion @ ./loading.jl:2421 [inlined] [14] macro expansion @ ./lock.jl:376 [inlined] [15] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2386 [16] require(into::Module, mod::Symbol) @ Base ./loading.jl:2362 [17] top-level scope @ ~/.julia/packages/ScikitLearn/Wvn7B/src/Skcore.jl:11 [18] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:307 [19] top-level scope @ ~/.julia/packages/ScikitLearn/Wvn7B/src/ScikitLearn.jl:12 [20] include(mod::Module, _path::String) @ Base ./Base.jl:306 [21] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3024 [22] top-level scope @ stdin:5 [23] eval(m::Module, e::Any) @ Core ./boot.jl:489 [24] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2870 [25] include_string @ ./loading.jl:2880 [inlined] [26] exec_options(opts::Base.JLOptions) @ Base ./client.jl:315 [27] _start() @ Base ./client.jl:550 in expression starting at /home/pkgeval/.julia/packages/ScikitLearn/Wvn7B/src/Skcore.jl:5 in expression starting at /home/pkgeval/.julia/packages/ScikitLearn/Wvn7B/src/ScikitLearn.jl:10 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile ScikitLearn [3646fa90-6ef7-5e7e-9f22-8aca16db6324] to "/home/pkgeval/.julia/compiled/v1.12/ScikitLearn/jl_gqZGy8". Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3311 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}})() @ Base ./loading.jl:2679 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:93 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:88 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:114 [7] #invokelatest_gr#232 @ ./reflection.jl:1297 [inlined] [8] invokelatest_gr @ ./reflection.jl:1289 [inlined] [9] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3882 [10] maybe_cachefile_lock @ ./loading.jl:3879 [inlined] [11] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2665 [12] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2493 [13] macro expansion @ ./loading.jl:2421 [inlined] [14] macro expansion @ ./lock.jl:376 [inlined] [15] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2386 [16] require(into::Module, mod::Symbol) @ Base ./loading.jl:2362 [17] top-level scope @ ~/.julia/packages/CherenkovDeconvolution/Mui86/src/DeconvUtil.jl:24 [18] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:307 [19] top-level scope @ ~/.julia/packages/CherenkovDeconvolution/Mui86/src/CherenkovDeconvolution.jl:26 [20] include(mod::Module, _path::String) @ Base ./Base.jl:306 [21] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3024 [22] top-level scope @ stdin:5 [23] eval(m::Module, e::Any) @ Core ./boot.jl:489 [24] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2870 [25] include_string @ ./loading.jl:2880 [inlined] [26] exec_options(opts::Base.JLOptions) @ Base ./client.jl:315 [27] _start() @ Base ./client.jl:550 in expression starting at /home/pkgeval/.julia/packages/CherenkovDeconvolution/Mui86/src/DeconvUtil.jl:22 in expression starting at /home/pkgeval/.julia/packages/CherenkovDeconvolution/Mui86/src/CherenkovDeconvolution.jl:22 in expression starting at stdin:5 PyCall Failed to precompile PyCall [438e738f-606a-5dbb-bf0a-cddfbfd45ab0] to "/home/pkgeval/.julia/compiled/v1.12/PyCall/jl_uHtCsa". ERROR: LoadError: ArgumentError: Source type for `reinterpret` must be isbits Stacktrace: [1] _reinterpret @ ./reinterpretarray.jl:856 [inlined] [2] reinterpret @ ./essentials.jl:736 [inlined] [3] _preserveas!(dest::Vector{UInt8}, ::Type{Cwstring}, x::String) @ PyCall ~/.julia/packages/PyCall/ygXW2/deps/depsutils.jl:67 [4] Py_SetPythonHome(libpy::Ptr{Nothing}, pyversion::VersionNumber, PYTHONHOME::String) @ PyCall ~/.julia/packages/PyCall/ygXW2/deps/depsutils.jl:36 [5] top-level scope @ ~/.julia/packages/PyCall/ygXW2/src/startup.jl:57 [6] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:307 [7] top-level scope @ ~/.julia/packages/PyCall/ygXW2/src/PyCall.jl:38 [8] include(mod::Module, _path::String) @ Base ./Base.jl:306 [9] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3024 [10] top-level scope @ stdin:5 [11] eval(m::Module, e::Any) @ Core ./boot.jl:489 [12] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2870 [13] include_string @ ./loading.jl:2880 [inlined] [14] exec_options(opts::Base.JLOptions) @ Base ./client.jl:315 [15] _start() @ Base ./client.jl:550 in expression starting at /home/pkgeval/.julia/packages/PyCall/ygXW2/src/startup.jl:41 in expression starting at /home/pkgeval/.julia/packages/PyCall/ygXW2/src/PyCall.jl:1 in expression starting at stdin:5 ScikitLearn Failed to precompile ScikitLearn [3646fa90-6ef7-5e7e-9f22-8aca16db6324] to "/home/pkgeval/.julia/compiled/v1.12/ScikitLearn/jl_cptE4k". ERROR: LoadError: ArgumentError: Source type for `reinterpret` must be isbits Stacktrace: [1] _reinterpret @ ./reinterpretarray.jl:856 [inlined] [2] reinterpret @ ./essentials.jl:736 [inlined] [3] _preserveas!(dest::Vector{UInt8}, ::Type{Cwstring}, x::String) @ PyCall ~/.julia/packages/PyCall/ygXW2/deps/depsutils.jl:67 [4] Py_SetPythonHome(libpy::Ptr{Nothing}, pyversion::VersionNumber, PYTHONHOME::String) @ PyCall ~/.julia/packages/PyCall/ygXW2/deps/depsutils.jl:36 [5] top-level scope @ ~/.julia/packages/PyCall/ygXW2/src/startup.jl:57 [6] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:307 [7] top-level scope @ ~/.julia/packages/PyCall/ygXW2/src/PyCall.jl:38 [8] include(mod::Module, _path::String) @ Base ./Base.jl:306 [9] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3024 [10] top-level scope @ stdin:5 [11] eval(m::Module, e::Any) @ Core ./boot.jl:489 [12] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2870 [13] include_string @ ./loading.jl:2880 [inlined] [14] exec_options(opts::Base.JLOptions) @ Base ./client.jl:315 [15] _start() @ Base ./client.jl:550 in expression starting at /home/pkgeval/.julia/packages/PyCall/ygXW2/src/startup.jl:41 in expression starting at /home/pkgeval/.julia/packages/PyCall/ygXW2/src/PyCall.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile PyCall [438e738f-606a-5dbb-bf0a-cddfbfd45ab0] to "/home/pkgeval/.julia/compiled/v1.12/PyCall/jl_lt0dgN". Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3311 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}})() @ Base ./loading.jl:2679 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:93 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:88 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:114 [7] #invokelatest_gr#232 @ ./reflection.jl:1297 [inlined] [8] invokelatest_gr @ ./reflection.jl:1289 [inlined] [9] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3882 [10] maybe_cachefile_lock @ ./loading.jl:3879 [inlined] [11] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2665 [12] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2493 [13] macro expansion @ ./loading.jl:2421 [inlined] [14] macro expansion @ ./lock.jl:376 [inlined] [15] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2386 [16] require(into::Module, mod::Symbol) @ Base ./loading.jl:2362 [17] top-level scope @ ~/.julia/packages/ScikitLearn/Wvn7B/src/Skcore.jl:11 [18] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:307 [19] top-level scope @ ~/.julia/packages/ScikitLearn/Wvn7B/src/ScikitLearn.jl:12 [20] include(mod::Module, _path::String) @ Base ./Base.jl:306 [21] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3024 [22] top-level scope @ stdin:5 [23] eval(m::Module, e::Any) @ Core ./boot.jl:489 [24] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2870 [25] include_string @ ./loading.jl:2880 [inlined] [26] exec_options(opts::Base.JLOptions) @ Base ./client.jl:315 [27] _start() @ Base ./client.jl:550 in expression starting at /home/pkgeval/.julia/packages/ScikitLearn/Wvn7B/src/Skcore.jl:5 in expression starting at /home/pkgeval/.julia/packages/ScikitLearn/Wvn7B/src/ScikitLearn.jl:10 in expression starting at stdin:5 in expression starting at /home/pkgeval/.julia/packages/CherenkovDeconvolution/Mui86/test/runtests.jl:1 Testing failed after 44.62s ERROR: LoadError: Package CherenkovDeconvolution errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2535 [3] test @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2384 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:538 [5] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:169 [6] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:157 [7] test @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:157 [inlined] [8] #test#81 @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:156 [inlined] [9] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:223 [10] include(mod::Module, _path::String) @ Base ./Base.jl:306 [11] exec_options(opts::Base.JLOptions) @ Base ./client.jl:317 [12] _start() @ Base ./client.jl:550 in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 PkgEval failed after 203.55s: package fails to precompile