Package evaluation to test Catalyst on Julia 1.12.4 (0f21d93eaa*) started at 2026-01-27T08:56:48.250 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.12` Set-up completed after 8.01s ################################################################################ # Installation # Installing Catalyst... Resolving package versions... Updating `~/.julia/environments/v1.12/Project.toml` [479239e8] + Catalyst v15.0.11 Updating `~/.julia/environments/v1.12/Manifest.toml` [47edcb42] + ADTypes v1.21.0 [1520ce14] + AbstractTrees v0.4.5 [7d9f7c33] + Accessors v0.1.43 [79e6a3ab] + Adapt v4.4.0 [66dad0bd] + AliasTables v1.1.3 [ec485272] + ArnoldiMethod v0.4.0 [4fba245c] + ArrayInterface v7.22.0 [4c555306] + ArrayLayouts v1.12.2 [e2ed5e7c] + Bijections v0.2.2 [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 [8e7c35d0] + BlockArrays v1.9.3 [70df07ce] + BracketingNonlinearSolve v1.6.2 [2a0fbf3d] + CPUSummary v0.2.7 [479239e8] + Catalyst v15.0.11 [d360d2e6] + ChainRulesCore v1.26.0 [fb6a15b2] + CloseOpenIntervals v0.1.13 ⌅ [861a8166] + Combinatorics v1.0.2 ⌅ [a80b9123] + CommonMark v0.9.1 [38540f10] + CommonSolve v0.2.6 [bbf7d656] + CommonSubexpressions v0.3.1 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.18.1 [b152e2b5] + CompositeTypes v0.1.4 [a33af91c] + CompositionsBase v0.1.2 [2569d6c7] + ConcreteStructs v0.2.3 [187b0558] + ConstructionBase v1.6.0 [adafc99b] + CpuId v0.3.1 [9a962f9c] + DataAPI v1.16.0 ⌅ [864edb3b] + DataStructures v0.18.22 [2b5f629d] + DiffEqBase v6.199.0 [459566f4] + DiffEqCallbacks v4.12.0 [77a26b50] + DiffEqNoiseProcess v5.26.0 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [a0c0ee7d] + DifferentiationInterface v0.7.15 [8d63f2c5] + DispatchDoctor v0.4.27 [31c24e10] + Distributions v0.25.123 [ffbed154] + DocStringExtensions v0.9.5 [5b8099bc] + DomainSets v0.7.16 ⌃ [7c1d4256] + DynamicPolynomials v0.6.3 [06fc5a27] + DynamicQuantities v1.11.0 [4e289a0a] + EnumX v1.0.6 [f151be2c] + EnzymeCore v0.8.18 [e2ba6199] + ExprTools v0.1.10 [55351af7] + ExproniconLite v0.10.14 [7034ab61] + FastBroadcast v0.3.5 [9aa1b823] + FastClosures v0.3.2 [a4df4552] + FastPower v1.3.0 [1a297f60] + FillArrays v1.16.0 [64ca27bc] + FindFirstFunctions v1.8.0 [6a86dc24] + FiniteDiff v2.29.0 [1fa38f19] + Format v1.3.7 [f6369f11] + ForwardDiff v1.3.1 [069b7b12] + FunctionWrappers v1.1.3 [77dc65aa] + FunctionWrappersWrappers v0.1.3 [46192b85] + GPUArraysCore v0.2.0 [c27321d9] + Glob v1.4.0 ⌃ [86223c79] + Graphs v1.13.1 [34004b35] + HypergeometricFunctions v0.3.28 [615f187c] + IfElse v0.1.1 [d25df0c9] + Inflate v0.1.5 [18e54dd8] + IntegerMathUtils v0.1.3 [8197267c] + IntervalSets v0.7.13 [3587e190] + InverseFunctions v0.1.17 [92d709cd] + IrrationalConstants v0.2.6 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 [ae98c720] + Jieko v0.2.1 [98e50ef6] + JuliaFormatter v2.2.0 ⌅ [70703baa] + JuliaSyntax v0.4.10 [ccbc3e58] + JumpProcesses v9.21.0 [ba0b0d4f] + Krylov v0.10.5 [b964fa9f] + LaTeXStrings v1.4.0 [23fbe1c1] + Latexify v0.16.10 [10f19ff3] + LayoutPointers v0.1.17 [87fe0de2] + LineSearch v0.1.6 [7ed4a6bd] + LinearSolve v3.57.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [e6f89c97] + LoggingExtras v1.2.0 [d8e11817] + MLStyle v0.4.17 [1914dd2f] + MacroTools v0.5.16 [d125e4d3] + ManualMemory v0.1.8 [bb5d69b7] + MaybeInplace v0.1.4 [e1d29d7a] + Missings v1.2.0 ⌅ [961ee093] + ModelingToolkit v9.84.0 [2e0e35c7] + Moshi v0.3.7 [46d2c3a1] + MuladdMacro v0.2.4 ⌃ [102ac46a] + MultivariatePolynomials v0.5.9 [d8a4904e] + MutableArithmetics v1.6.7 [77ba4419] + NaNMath v1.1.3 [8913a72c] + NonlinearSolve v4.14.0 [be0214bd] + NonlinearSolveBase v2.11.1 [5959db7a] + NonlinearSolveFirstOrder v1.11.1 [9a2c21bd] + NonlinearSolveQuasiNewton v1.12.0 [26075421] + NonlinearSolveSpectralMethods v1.6.0 [6fe1bfb0] + OffsetArrays v1.17.0 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.37 [d96e819e] + Parameters v0.12.3 [e409e4f3] + PoissonRandom v0.4.7 [f517fe37] + Polyester v0.7.18 [1d0040c9] + PolyesterWeave v0.2.2 ⌃ [d236fae5] + PreallocationTools v0.4.34 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.1 [27ebfcd6] + Primes v0.5.7 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [74087812] + Random123 v1.7.1 [e6cf234a] + RandomNumbers v1.6.0 [3cdcf5f2] + RecipesBase v1.3.4 [731186ca] + RecursiveArrayTools v3.46.0 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [ae5879a3] + ResettableStacks v1.2.0 [79098fc4] + Rmath v0.9.0 [7e49a35a] + RuntimeGeneratedFunctions v0.5.16 [9dfe8606] + SCCNonlinearSolve v1.9.0 [94e857df] + SIMDTypes v0.1.0 [0bca4576] + SciMLBase v2.135.0 [19f34311] + SciMLJacobianOperators v0.1.12 [a6db7da4] + SciMLLogging v1.8.0 [c0aeaf25] + SciMLOperators v1.14.1 [431bcebd] + SciMLPublic v1.0.1 [53ae85a6] + SciMLStructures v1.10.0 [efcf1570] + Setfield v1.1.2 [727e6d20] + SimpleNonlinearSolve v2.10.0 [699a6c99] + SimpleTraits v0.9.5 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.6.1 [aedffcd0] + Static v1.3.1 [0d7ed370] + StaticArrayInterface v1.8.0 [90137ffa] + StaticArrays v1.9.16 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 [2913bbd2] + StatsBase v0.34.10 [4c63d2b9] + StatsFuns v1.5.2 [7792a7ef] + StrideArraysCore v0.5.8 [2efcf032] + SymbolicIndexingInterface v0.3.46 ⌅ [19f23fe9] + SymbolicLimits v0.2.3 ⌅ [d1185830] + SymbolicUtils v3.32.0 ⌅ [0c5d862f] + Symbolics v6.58.0 [ed4db957] + TaskLocalValues v0.1.3 [8ea1fca8] + TermInterface v2.0.0 [1c621080] + TestItems v1.0.0 [8290d209] + ThreadingUtilities v0.5.5 [a759f4b9] + TimerOutputs v0.5.29 [410a4b4d] + Tricks v0.1.13 [781d530d] + TruncatedStacktraces v1.4.0 [5c2747f8] + URIs v1.6.1 [3a884ed6] + UnPack v1.0.2 [1986cc42] + Unitful v1.27.0 [a7c27f48] + Unityper v0.1.6 [61579ee1] + Ghostscript_jll v9.55.1+0 [1d5cc7b8] + IntelOpenMP_jll v2025.2.0+0 [aacddb02] + JpegTurbo_jll v3.1.4+0 [856f044c] + MKL_jll v2025.2.0+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [1317d2d5] + oneTBB_jll v2022.0.0+1 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.12.1 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.15.0+0 [e37daf67] + LibGit2_jll v1.9.0+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.11.4 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [bea87d4a] + SuiteSparse_jll v7.8.3+2 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.64.0+1 [3f19e933] + p7zip_jll v17.7.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Installation completed after 7.76s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompiling packages... 98194.9 ms ? DataInterpolations → DataInterpolationsSymbolicsExt 143052.0 ms ? Catalyst Precompilation completed after 281.16s ################################################################################ # Testing # Testing Catalyst Status `/tmp/jl_S59cLb/Project.toml` [479239e8] Catalyst v15.0.11 ⌅ [861a8166] Combinatorics v1.0.2 [82cc6244] DataInterpolations v8.9.0 ⌅ [864edb3b] DataStructures v0.18.22 [2b5f629d] DiffEqBase v6.199.0 [459566f4] DiffEqCallbacks v4.12.0 [ffbed154] DocStringExtensions v0.9.5 [5b8099bc] DomainSets v0.7.16 ⌃ [7c1d4256] DynamicPolynomials v0.6.3 [06fc5a27] DynamicQuantities v1.11.0 [4e289a0a] EnumX v1.0.6 ⌃ [86223c79] Graphs v1.13.1 [ccbc3e58] JumpProcesses v9.21.0 [b964fa9f] LaTeXStrings v1.4.0 [23fbe1c1] Latexify v0.16.10 [1914dd2f] MacroTools v0.5.16 ⌅ [961ee093] ModelingToolkit v9.84.0 [8913a72c] NonlinearSolve v4.14.0 ⌃ [6ad6398a] OrdinaryDiffEqBDF v1.13.0 ⌃ [50262376] OrdinaryDiffEqDefault v1.11.0 ⌃ [43230ef6] OrdinaryDiffEqRosenbrock v1.21.0 ⌃ [b1df2697] OrdinaryDiffEqTsit5 v1.8.0 ⌃ [79d7bb75] OrdinaryDiffEqVerner v1.9.0 [d96e819e] Parameters v0.12.3 [91a5bcdd] Plots v1.41.4 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [7e49a35a] RuntimeGeneratedFunctions v0.5.16 [1bc83da4] SafeTestsets v0.1.0 [0bca4576] SciMLBase v2.135.0 [efcf1570] Setfield v1.1.2 [860ef19b] StableRNGs v1.0.4 [90137ffa] StaticArrays v1.9.16 [10745b16] Statistics v1.11.1 [9672c7b4] SteadyStateDiffEq v2.9.0 ⌃ [789caeaf] StochasticDiffEq v6.90.0 ⌅ [d1185830] SymbolicUtils v3.32.0 ⌅ [0c5d862f] Symbolics v6.58.0 [1986cc42] Unitful v1.27.0 [37e2e46d] LinearAlgebra v1.12.0 [56ddb016] Logging v1.11.0 [44cfe95a] Pkg v1.12.1 [9a3f8284] Random v1.11.0 [2f01184e] SparseArrays v1.12.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_S59cLb/Manifest.toml` [47edcb42] ADTypes v1.21.0 [1520ce14] AbstractTrees v0.4.5 [7d9f7c33] Accessors v0.1.43 [79e6a3ab] Adapt v4.4.0 [66dad0bd] AliasTables v1.1.3 [ec485272] ArnoldiMethod v0.4.0 [4fba245c] ArrayInterface v7.22.0 [4c555306] ArrayLayouts v1.12.2 [e2ed5e7c] Bijections v0.2.2 [d1d4a3ce] BitFlags v0.1.9 [62783981] BitTwiddlingConvenienceFunctions v0.1.6 [8e7c35d0] BlockArrays v1.9.3 [70df07ce] BracketingNonlinearSolve v1.6.2 [2a0fbf3d] CPUSummary v0.2.7 [479239e8] Catalyst v15.0.11 [d360d2e6] ChainRulesCore v1.26.0 [fb6a15b2] CloseOpenIntervals v0.1.13 [944b1d66] CodecZlib v0.7.8 [35d6a980] ColorSchemes v3.31.0 [3da002f7] ColorTypes v0.12.1 [c3611d14] ColorVectorSpace v0.11.0 [5ae59095] Colors v0.13.1 ⌅ [861a8166] Combinatorics v1.0.2 ⌅ [a80b9123] CommonMark v0.9.1 [38540f10] CommonSolve v0.2.6 [bbf7d656] CommonSubexpressions v0.3.1 [f70d9fcc] CommonWorldInvalidations v1.0.0 [34da2185] Compat v4.18.1 [b152e2b5] CompositeTypes v0.1.4 [a33af91c] CompositionsBase v0.1.2 [2569d6c7] ConcreteStructs v0.2.3 [f0e56b4a] ConcurrentUtilities v2.5.0 [187b0558] ConstructionBase v1.6.0 [d38c429a] Contour v0.6.3 [adafc99b] CpuId v0.3.1 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [82cc6244] DataInterpolations v8.9.0 ⌅ [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [8bb1440f] DelimitedFiles v1.9.1 [2b5f629d] DiffEqBase v6.199.0 [459566f4] DiffEqCallbacks v4.12.0 [77a26b50] DiffEqNoiseProcess v5.26.0 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [a0c0ee7d] DifferentiationInterface v0.7.15 [8d63f2c5] DispatchDoctor v0.4.27 [31c24e10] Distributions v0.25.123 [ffbed154] DocStringExtensions v0.9.5 [5b8099bc] DomainSets v0.7.16 ⌃ [7c1d4256] DynamicPolynomials v0.6.3 [06fc5a27] DynamicQuantities v1.11.0 [4e289a0a] EnumX v1.0.6 [f151be2c] EnzymeCore v0.8.18 [460bff9d] ExceptionUnwrapping v0.1.11 [e2ba6199] ExprTools v0.1.10 [55351af7] ExproniconLite v0.10.14 [c87230d0] FFMPEG v0.4.5 [7034ab61] FastBroadcast v0.3.5 [9aa1b823] FastClosures v0.3.2 [a4df4552] FastPower v1.3.0 [1a297f60] FillArrays v1.16.0 [64ca27bc] FindFirstFunctions v1.8.0 [6a86dc24] FiniteDiff v2.29.0 [53c48c17] FixedPointNumbers v0.8.5 [1fa38f19] Format v1.3.7 [f6369f11] ForwardDiff v1.3.1 [069b7b12] FunctionWrappers v1.1.3 [77dc65aa] FunctionWrappersWrappers v0.1.3 [46192b85] GPUArraysCore v0.2.0 [28b8d3ca] GR v0.73.21 [c27321d9] Glob v1.4.0 ⌃ [86223c79] Graphs v1.13.1 [42e2da0e] Grisu v1.0.2 [cd3eb016] HTTP v1.10.19 [34004b35] HypergeometricFunctions v0.3.28 [615f187c] IfElse v0.1.1 [d25df0c9] Inflate v0.1.5 [18e54dd8] IntegerMathUtils v0.1.3 [8197267c] IntervalSets v0.7.13 [3587e190] InverseFunctions v0.1.17 [92d709cd] IrrationalConstants v0.2.6 [82899510] IteratorInterfaceExtensions v1.0.0 [1019f520] JLFzf v0.1.11 [692b3bcd] JLLWrappers v1.7.1 [682c06a0] JSON v1.4.0 [ae98c720] Jieko v0.2.1 [98e50ef6] JuliaFormatter v2.2.0 ⌅ [70703baa] JuliaSyntax v0.4.10 [ccbc3e58] JumpProcesses v9.21.0 [ba0b0d4f] Krylov v0.10.5 [b964fa9f] LaTeXStrings v1.4.0 [23fbe1c1] Latexify v0.16.10 [10f19ff3] LayoutPointers v0.1.17 [2d8b4e74] LevyArea v1.0.0 [87fe0de2] LineSearch v0.1.6 [7ed4a6bd] LinearSolve v3.57.0 [2ab3a3ac] LogExpFunctions v0.3.29 [e6f89c97] LoggingExtras v1.2.0 [d8e11817] MLStyle v0.4.17 [1914dd2f] MacroTools v0.5.16 [d125e4d3] ManualMemory v0.1.8 [bb5d69b7] MaybeInplace v0.1.4 [739be429] MbedTLS v1.1.9 [442fdcdd] Measures v0.3.3 [e1d29d7a] Missings v1.2.0 ⌅ [961ee093] ModelingToolkit v9.84.0 [2e0e35c7] Moshi v0.3.7 [46d2c3a1] MuladdMacro v0.2.4 ⌃ [102ac46a] MultivariatePolynomials v0.5.9 [d8a4904e] MutableArithmetics v1.6.7 [77ba4419] NaNMath v1.1.3 [8913a72c] NonlinearSolve v4.14.0 [be0214bd] NonlinearSolveBase v2.11.1 [5959db7a] NonlinearSolveFirstOrder v1.11.1 [9a2c21bd] NonlinearSolveQuasiNewton v1.12.0 [26075421] NonlinearSolveSpectralMethods v1.6.0 [6fe1bfb0] OffsetArrays v1.17.0 [4d8831e6] OpenSSL v1.6.1 [bac558e1] OrderedCollections v1.8.1 ⌃ [6ad6398a] OrdinaryDiffEqBDF v1.13.0 ⌅ [bbf590c4] OrdinaryDiffEqCore v2.3.0 ⌃ [50262376] OrdinaryDiffEqDefault v1.11.0 ⌃ [4302a76b] OrdinaryDiffEqDifferentiation v1.21.0 ⌃ [127b3ac7] OrdinaryDiffEqNonlinearSolve v1.18.1 ⌃ [43230ef6] OrdinaryDiffEqRosenbrock v1.21.0 ⌃ [2d112036] OrdinaryDiffEqSDIRK v1.10.0 ⌃ [b1df2697] OrdinaryDiffEqTsit5 v1.8.0 ⌃ [79d7bb75] OrdinaryDiffEqVerner 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Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... Precompiling packages... 976851.5 ms ✓ Catalyst 1 dependency successfully precompiled in 988 seconds. 301 already precompiled. Test Summary: | Pass Total Time Reaction Structure | 95 95 18m51.9s 1132.180416 seconds (59.35 M allocations: 3.619 GiB, 0.78% gc time, 6.75% compilation time: 2% of which was recompilation) Precompiling packages... 15215.2 ms ✓ OrdinaryDiffEqCore 5566.6 ms ✓ OrdinaryDiffEqCore → OrdinaryDiffEqCoreEnzymeCoreExt 18133.9 ms ✓ OrdinaryDiffEqTsit5 3 dependencies successfully precompiled in 41 seconds. 100 already precompiled. Precompiling packages... 76205.3 ms ✓ OrdinaryDiffEqVerner 1 dependency successfully precompiled in 78 seconds. 102 already precompiled. Precompiling packages... 19107.3 ms ✓ OrdinaryDiffEqDifferentiation 10103.6 ms ✓ OrdinaryDiffEqDifferentiation → OrdinaryDiffEqDifferentiationSparseArraysExt 19503.2 ms ✓ OrdinaryDiffEqNonlinearSolve 28448.8 ms ✓ StochasticDiffEq 4 dependencies successfully precompiled in 84 seconds. 234 already precompiled. [ Info: Boundary condition species detected. As constraint equations are not currently supported when converting to SDESystems, the resulting system will be undetermined. Consider using constant species instead. ┌ Warning: JumpProblem(rn::ReactionSystem, prob, ...) is deprecated and will be removed in Catalyst 16. Use JumpProblem(JumpInputs(rn, ...), ...) instead. │ caller = top-level scope at reactionsystem.jl:674 └ @ Core ~/.julia/packages/Catalyst/DMVHG/test/reactionsystem_core/reactionsystem.jl:674 ┌ Warning: JumpInputs has detected the system includes ODEs, variable rate jumps, or continuous events. Please note that currently remake does not work for such problems, and both JumpInputs and then JumpProblem must be called again if you wish to change any parameter or initial condition values. This warning can be disabled by passing JumpInputs the keyword argument `remake_warn = false`. └ @ Catalyst ~/.julia/packages/Catalyst/DMVHG/src/reactionsystem_conversions.jl:998 ┌ Warning: JumpInputs has detected the system includes ODEs, variable rate jumps, or continuous events. Please note that currently remake does not work for such problems, and both JumpInputs and then JumpProblem must be called again if you wish to change any parameter or initial condition values. This warning can be disabled by passing JumpInputs the keyword argument `remake_warn = false`. └ @ Catalyst ~/.julia/packages/Catalyst/DMVHG/src/reactionsystem_conversions.jl:998 ┌ Warning: JumpInputs has detected the system includes ODEs, variable rate jumps, or continuous events. Please note that currently remake does not work for such problems, and both JumpInputs and then JumpProblem must be called again if you wish to change any parameter or initial condition values. This warning can be disabled by passing JumpInputs the keyword argument `remake_warn = false`. └ @ Catalyst ~/.julia/packages/Catalyst/DMVHG/src/reactionsystem_conversions.jl:998 Test Summary: | Pass Broken Total Time ReactionSystem Structure | 302 2 304 14m40.4s 880.665946 seconds (327.31 M allocations: 17.217 GiB, 1.18% gc time, 75.00% compilation time: <1% of which was recompilation) Test Summary: | Pass Total Time Higher Order Reactions | 38 38 45.9s 45.946174 seconds (26.18 M allocations: 1.261 GiB, 1.02% gc time, 93.58% compilation time) Test Summary: | Pass Total Time Symbolic Stoichiometry | 26 26 4m36.4s 276.431892 seconds (139.23 M allocations: 7.303 GiB, 1.70% gc time, 97.45% compilation time) ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 59 running 1 of 1 signal (10): User defined signal 1 _ZN4llvm9SDDbgInfo5eraseEPKNS_6SDNodeE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm12SelectionDAG14DeallocateNodeEPNS_6SDNodeE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm12SelectionDAG8LegalizeEv at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm16SelectionDAGISel17CodeGenAndEmitDAGEv at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm16SelectionDAGISel20SelectAllBasicBlocksERKNS_8FunctionE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm16SelectionDAGISel20runOnMachineFunctionERNS_15MachineFunctionE.part.0 at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN12_GLOBAL__N_115X86DAGToDAGISel20runOnMachineFunctionERN4llvm15MachineFunctionE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm19MachineFunctionPass13runOnFunctionERNS_8FunctionE.part.0 at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm13FPPassManager13runOnFunctionERNS_8FunctionE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm13FPPassManager11runOnModuleERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm6legacy15PassManagerImpl3runERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm3orc14SimpleCompilerclERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) operator() at /source/src/jitlayers.cpp:1561 addModule at /source/src/jitlayers.cpp:2044 jl_compile_codeinst_now at /source/src/jitlayers.cpp:626 jl_compile_codeinst_impl at /source/src/jitlayers.cpp:824 jl_compile_method_internal at /source/src/gf.c:3524 _jl_invoke at /source/src/gf.c:4002 [inlined] ijl_apply_generic at /source/src/gf.c:4210 #_#1078 at /home/pkgeval/.julia/packages/ModelingToolkit/aiAqm/src/systems/nonlinear/nonlinearsystem.jl:380 NonlinearFunction at /home/pkgeval/.julia/packages/ModelingToolkit/aiAqm/src/systems/nonlinear/nonlinearsystem.jl:366 unknown function (ip: 0x7e972a0718a6) at (unknown file) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 #process_SciMLProblem#861 at /home/pkgeval/.julia/packages/ModelingToolkit/aiAqm/src/systems/problem_utils.jl:1422 process_SciMLProblem at /home/pkgeval/.julia/packages/ModelingToolkit/aiAqm/src/systems/problem_utils.jl:1262 [inlined] #_#1083 at /home/pkgeval/.julia/packages/ModelingToolkit/aiAqm/src/systems/nonlinear/nonlinearsystem.jl:550 NonlinearProblem at /home/pkgeval/.julia/packages/ModelingToolkit/aiAqm/src/systems/nonlinear/nonlinearsystem.jl:544 unknown function (ip: 0x7e9729585e30) at (unknown file) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 #_#1407 at /home/pkgeval/.julia/packages/ModelingToolkit/aiAqm/src/systems/diffeqs/abstractodesystem.jl:1557 InitializationProblem at /home/pkgeval/.julia/packages/ModelingToolkit/aiAqm/src/systems/diffeqs/abstractodesystem.jl:1442 unknown function (ip: 0x7e9728102a89) at (unknown file) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 jl_apply at /source/src/julia.h:2391 [inlined] jl_f__apply_iterate at /source/src/builtins.c:868 #_#1405 at /home/pkgeval/.julia/packages/ModelingToolkit/aiAqm/src/systems/diffeqs/abstractodesystem.jl:1420 _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 jl_apply at /source/src/julia.h:2391 [inlined] jl_f__apply_iterate at /source/src/builtins.c:868 InitializationProblem at /home/pkgeval/.julia/packages/ModelingToolkit/aiAqm/src/systems/diffeqs/abstractodesystem.jl:1419 _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 #maybe_build_initialization_problem#851 at /home/pkgeval/.julia/packages/ModelingToolkit/aiAqm/src/systems/problem_utils.jl:1070 maybe_build_initialization_problem at /home/pkgeval/.julia/packages/ModelingToolkit/aiAqm/src/systems/problem_utils.jl:1059 unknown function (ip: 0x7e97285fec5c) at (unknown file) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 #process_SciMLProblem#861 at /home/pkgeval/.julia/packages/ModelingToolkit/aiAqm/src/systems/problem_utils.jl:1325 unknown function (ip: 0x7e972a066e27) at (unknown file) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 process_SciMLProblem at /home/pkgeval/.julia/packages/ModelingToolkit/aiAqm/src/systems/problem_utils.jl:1262 #_#1359 at /home/pkgeval/.julia/packages/ModelingToolkit/aiAqm/src/systems/diffeqs/abstractodesystem.jl:806 ODEProblem at /home/pkgeval/.julia/packages/ModelingToolkit/aiAqm/src/systems/diffeqs/abstractodesystem.jl:781 unknown function (ip: 0x7e972a0630ba) at (unknown file) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 jl_apply at /source/src/julia.h:2391 [inlined] jl_f__apply_iterate at /source/src/builtins.c:868 #_#1357 at /home/pkgeval/.julia/packages/ModelingToolkit/aiAqm/src/systems/diffeqs/abstractodesystem.jl:774 _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 jl_apply at /source/src/julia.h:2391 [inlined] jl_f__apply_iterate at /source/src/builtins.c:868 ODEProblem at /home/pkgeval/.julia/packages/ModelingToolkit/aiAqm/src/systems/diffeqs/abstractodesystem.jl:773 _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 jl_apply at /source/src/julia.h:2391 [inlined] jl_f__apply_iterate at /source/src/builtins.c:868 #ODEProblem#1355 at /home/pkgeval/.julia/packages/ModelingToolkit/aiAqm/src/systems/diffeqs/abstractodesystem.jl:763 _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 jl_apply at /source/src/julia.h:2391 [inlined] jl_f__apply_iterate at /source/src/builtins.c:868 ODEProblem at /home/pkgeval/.julia/packages/ModelingToolkit/aiAqm/src/systems/diffeqs/abstractodesystem.jl:762 _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 #ODEProblem#203 at /home/pkgeval/.julia/packages/Catalyst/DMVHG/src/reactionsystem_conversions.jl:845 ODEProblem at /home/pkgeval/.julia/packages/Catalyst/DMVHG/src/reactionsystem_conversions.jl:827 unknown function (ip: 0x7e972a03d05d) at (unknown file) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 top-level scope at /home/pkgeval/.julia/packages/Catalyst/DMVHG/test/reactionsystem_core/parameter_type_designation.jl:65 _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_invoke at /source/src/gf.c:4017 jl_toplevel_eval_flex at /source/src/toplevel.c:1024 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 include_string at ./loading.jl:2870 _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 _include at ./loading.jl:2930 include at ./Base.jl:307 IncludeInto at ./Base.jl:308 jfptr_IncludeInto_58627.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 jl_apply at /source/src/julia.h:2391 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:689 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 jl_interpret_toplevel_thunk at /source/src/interpreter.c:898 jl_toplevel_eval_flex at /source/src/toplevel.c:1035 jl_eval_module_expr at /source/src/toplevel.c:197 [inlined] jl_toplevel_eval_flex at /source/src/toplevel.c:814 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 jfptr_eval_9703.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 macro expansion at /home/pkgeval/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:28 [inlined] macro expansion at ./timing.jl:697 [inlined] macro expansion at /home/pkgeval/.julia/packages/Catalyst/DMVHG/test/runtests.jl:23 [inlined] macro expansion at ./timing.jl:697 [inlined] top-level scope at /home/pkgeval/.julia/packages/Catalyst/DMVHG/test/runtests.jl:353 _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_invoke at /source/src/gf.c:4017 jl_toplevel_eval_flex at /source/src/toplevel.c:1024 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 include_string at ./loading.jl:2870 _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 _include at ./loading.jl:2930 include at ./Base.jl:307 IncludeInto at ./Base.jl:308 jfptr_IncludeInto_58627.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 jl_apply at /source/src/julia.h:2391 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:689 jl_interpret_toplevel_thunk at /source/src/interpreter.c:898 jl_toplevel_eval_flex at /source/src/toplevel.c:1035 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 exec_options at ./client.jl:283 _start at ./client.jl:550 jfptr__start_39366.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 jl_apply at /source/src/julia.h:2391 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1139 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x7e97580c0249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 poptask at ./task.jl:1216 wait at ./task.jl:1228 #wait#398 at ./condition.jl:141 wait at ./process.jl:685 wait at ./process.jl:686 jfptr_wait_37520.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 subprocess_handler at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2553 unknown function (ip: 0x762039182c93) at (unknown file) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 #205 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2493 withenv at ./env.jl:265 #190 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2308 with_temp_env at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2161 #186 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2275 #mktempdir#21 at ./file.jl:936 unknown function (ip: 0x762039173efc) at (unknown file) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 mktempdir at ./file.jl:932 mktempdir at ./file.jl:932 #sandbox#182 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2222 [inlined] sandbox at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2212 unknown function (ip: 0x76203916e549) at (unknown file) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 #test#193 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2478 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2384 [inlined] #test#170 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:538 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:515 unknown function (ip: 0x76203916daa1) at (unknown file) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 #test#84 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:169 unknown function (ip: 0x762039168d70) at (unknown file) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:158 #test#82 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:157 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:157 [inlined] #test#81 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:156 [inlined] test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:156 unknown function (ip: 0x7620391632af) at (unknown file) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 jl_apply at /source/src/julia.h:2391 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:689 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 jl_interpret_toplevel_thunk at /source/src/interpreter.c:898 jl_toplevel_eval_flex at /source/src/toplevel.c:1035 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 include_string at ./loading.jl:2870 _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 _include at ./loading.jl:2930 include at ./Base.jl:306 exec_options at ./client.jl:317 _start at ./client.jl:550 jfptr__start_39366.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 jl_apply at /source/src/julia.h:2391 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1139 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x762053736249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.12/Profile/src/Profile.jl:1361 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x00007620391fc010 Total snapshots: 362. Utilization: 0% ╎362 @Base/client.jl:550 _start() ╎ 362 @Base/client.jl:317 exec_options(opts::Base.JLOptions) ╎ 362 @Base/Base.jl:306 include(mod::Module, _path::String) ╎ 362 @Base/loading.jl:2930 _include(mapexpr::Function, mod::Module, _pat… ╎ 362 @Base/loading.jl:2870 include_string(mapexpr::typeof(identity), mo… ╎ 362 @Base/boot.jl:489 eval(m::Module, e::Any) ╎ ╎ 362 @Pkg/src/API.jl:156 kwcall(::@NamedTuple{julia_args::Cmd}, ::typ… ╎ ╎ 362 @Pkg/src/API.jl:156 #test#81 ╎ ╎ 362 @Pkg/src/API.jl:157 test ╎ ╎ 362 @Pkg/src/API.jl:157 test(pkgs::Vector{String}; kwargs::Base.P… ╎ ╎ 362 @Pkg/src/API.jl:158 kwcall(::@NamedTuple{julia_args::Cmd}, :… ╎ ╎ ╎ 362 @Pkg/src/API.jl:169 test(pkgs::Vector{PackageSpec}; io::IOC… ╎ ╎ ╎ 362 @Pkg/src/API.jl:515 kwcall(::@NamedTuple{julia_args::Cmd, … ╎ ╎ ╎ 362 @Pkg/src/API.jl:538 test(ctx::Pkg.Types.Context, pkgs::Ve… ╎ ╎ ╎ 362 @Pkg/…erations.jl:2384 test ╎ ╎ ╎ 362 @Pkg/…erations.jl:2478 test(ctx::Pkg.Types.Context, pkg… ╎ ╎ ╎ ╎ 362 @Pkg/…rations.jl:2212 kwcall(::@NamedTuple{preferences… ╎ ╎ ╎ ╎ 362 @Pkg/…rations.jl:2222 #sandbox#182 ╎ ╎ ╎ ╎ 362 @Base/file.jl:932 mktempdir(fn::Function) ╎ ╎ ╎ ╎ 362 @Base/file.jl:932 mktempdir(fn::Function, parent::S… ╎ ╎ ╎ ╎ 362 @Base/file.jl:936 mktempdir(fn::Pkg.Operations.var… ╎ ╎ ╎ ╎ ╎ 362 @Pkg/…tions.jl:2275 (::Pkg.Operations.var"#186#18… ╎ ╎ ╎ ╎ ╎ 362 @Pkg/…tions.jl:2161 with_temp_env(fn::Pkg.Operat… ╎ ╎ ╎ ╎ ╎ 362 @Pkg/…tions.jl:2308 (::Pkg.Operations.var"#190#… ╎ ╎ ╎ ╎ ╎ 362 @Base/env.jl:265 withenv(::Pkg.Operations.var"… ╎ ╎ ╎ ╎ ╎ 362 @Pkg/…ions.jl:2493 (::Pkg.Operations.var"#205… ╎ ╎ ╎ ╎ ╎ ╎ 362 @Pkg/…ons.jl:2553 subprocess_handler(cmd::Cm… ╎ ╎ ╎ ╎ ╎ ╎ 362 @Base/…ss.jl:686 wait(x::Base.Process) ╎ ╎ ╎ ╎ ╎ ╎ 362 @Base/…ss.jl:685 wait(x::Base.Process, syn… ╎ ╎ ╎ ╎ ╎ ╎ 362 @Base/…on.jl:141 wait(c::Base.GenericCond… ╎ ╎ ╎ ╎ ╎ ╎ 362 @Base/…sk.jl:1228 wait() 361╎ ╎ ╎ ╎ ╎ ╎ ╎ 362 @Base/…sk.jl:1216 poptask(W::Base.Intru… [1] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 poptask at ./task.jl:1216 wait at ./task.jl:1228 #wait#398 at ./condition.jl:141 _trywait at ./asyncevent.jl:163 profile_printing_listener at ./Base.jl:332 #start_profile_listener##0 at ./Base.jl:352 jfptr_YY.start_profile_listenerYY.YY.0_9934.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 jl_apply at /source/src/julia.h:2391 [inlined] start_task at /source/src/task.c:1252 unknown function (ip: (nil)) at (unknown file) Allocations: 27112591 (Pool: 27111802; Big: 789); GC: 20 [59] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/Catalyst/DMVHG/test/reactionsystem_core/parameter_type_designation.jl:63 PkgEval terminated after 2723.68s: test duration exceeded the time limit