Package evaluation to test Biofilm on Julia 1.12.4 (0f21d93eaa*) started at 2026-01-27T15:43:24.407 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.12` Set-up completed after 9.2s ################################################################################ # Installation # Installing Biofilm... Resolving package versions... Installed libdecor_jll ──────────────────────── v0.2.2+0 Installed Libmount_jll ──────────────────────── v2.41.2+0 Installed x265_jll ──────────────────────────── v4.1.0+0 Installed libfdk_aac_jll ────────────────────── v2.0.4+0 Installed RegistryInstances ─────────────────── v0.1.0 Installed JpegTurbo_jll ─────────────────────── v3.1.4+0 Installed OrdinaryDiffEqRKN ─────────────────── v1.9.0 Installed GR_jll ────────────────────────────── v0.73.21+0 Installed SciMLPublic ───────────────────────── v1.0.1 Installed OrdinaryDiffEqRosenbrock ──────────── v1.22.0 Installed Preferences ───────────────────────── v1.5.1 Installed Accessors ─────────────────────────── v0.1.43 Installed LERC_jll ──────────────────────────── v4.0.1+0 Installed LoggingExtras ─────────────────────── v1.2.0 Installed Opus_jll ──────────────────────────── v1.6.0+0 Installed SciMLLogging ──────────────────────── v1.8.0 Installed FastGaussQuadrature ───────────────── v1.1.0 Installed OrdinaryDiffEqStabilizedRK ────────── v1.8.0 Installed Xorg_xkbcomp_jll ──────────────────── v1.4.7+0 Installed RelocatableFolders ────────────────── v1.0.1 Installed OrdinaryDiffEqSDIRK ───────────────── v1.11.0 Installed NonlinearSolve ────────────────────── v4.12.0 Installed TimerOutputs ──────────────────────── v0.5.29 Installed Measures ──────────────────────────── v0.3.3 Installed GR ────────────────────────────────── v0.73.21 Installed SciMLJacobianOperators ────────────── v0.1.12 Installed ConcurrentUtilities ───────────────── v2.5.0 Installed Git_jll ───────────────────────────── v2.52.0+0 Installed Contour ───────────────────────────── v0.6.3 Installed StaticArrays ──────────────────────── v1.9.16 Installed Grisu ─────────────────────────────── v1.0.2 Installed ProgressMeter ─────────────────────── v1.11.0 Installed Polyester ─────────────────────────── v0.7.18 Installed OrdinaryDiffEqPRK ─────────────────── v1.8.0 Installed Xorg_xcb_util_wm_jll ──────────────── v0.4.2+0 Installed Xorg_xcb_util_image_jll ───────────── v0.4.1+0 Installed EnumX ─────────────────────────────── v1.0.6 Installed RecipesPipeline ───────────────────── v0.6.12 Installed PlotUtils ─────────────────────────── v1.4.4 Installed Sundials_jll ──────────────────────── v5.2.3+0 Installed RecursiveArrayTools ───────────────── v3.46.0 Installed OpenSSL ───────────────────────────── v1.6.1 Installed MaybeInplace ──────────────────────── v0.1.4 Installed CEnum ─────────────────────────────── v0.5.0 Installed DelimitedFiles ────────────────────── v1.9.1 Installed Xorg_libSM_jll ────────────────────── v1.2.6+0 Installed FunctionWrappers ──────────────────── v1.1.3 Installed Cairo_jll ─────────────────────────── v1.18.5+0 Installed Xorg_xcb_util_jll ─────────────────── v0.4.1+0 Installed Fontconfig_jll ────────────────────── v2.17.1+0 Installed OrdinaryDiffEqCore ────────────────── v3.1.0 Installed HTTP ──────────────────────────────── v1.10.19 Installed IntelOpenMP_jll ───────────────────── v2025.2.0+0 Installed Xorg_libxkbfile_jll ───────────────── v1.1.3+0 Installed Xorg_libXinerama_jll ──────────────── v1.1.6+0 Installed Statistics ────────────────────────── v1.11.1 Installed Static ────────────────────────────── v1.3.1 Installed OrdinaryDiffEqAdamsBashforthMoulton ─ v1.9.0 Installed OrdinaryDiffEqSSPRK ───────────────── v1.11.0 Installed EpollShim_jll ─────────────────────── v0.0.20230411+1 Installed Xorg_libXau_jll ───────────────────── v1.0.13+0 Installed Distances ─────────────────────────── v0.10.12 Installed Missings ──────────────────────────── v1.2.0 Installed FiniteDiff ────────────────────────── v2.29.0 Installed MuladdMacro ───────────────────────── v0.2.4 Installed OrdinaryDiffEqVerner ──────────────── v1.10.0 Installed FFMPEG ────────────────────────────── v0.4.5 Installed SIMDTypes ─────────────────────────── v0.1.0 Installed IrrationalConstants ───────────────── v0.2.6 Installed Showoff ───────────────────────────── v1.0.3 Installed FastPower ─────────────────────────── v1.3.0 Installed Functors ──────────────────────────── v0.4.12 Installed Pango_jll ─────────────────────────── v1.57.0+0 Installed CpuId ─────────────────────────────── v0.3.1 Installed PtrArrays ─────────────────────────── v1.3.0 Installed DiffEqBase ────────────────────────── v6.199.0 Installed JSON ──────────────────────────────── v1.4.0 Installed SciMLBase ─────────────────────────── v2.135.0 Installed OrdinaryDiffEqFIRK ────────────────── v1.20.0 Installed NonlinearSolveQuasiNewton ─────────── v1.12.0 Installed Xorg_xcb_util_keysyms_jll ─────────── v0.4.1+0 Installed ADTypes ───────────────────────────── v1.21.0 Installed SpecialFunctions ──────────────────── v2.6.1 Installed NLsolve ───────────────────────────── v4.5.1 Installed LinearSolve ───────────────────────── v3.57.0 Installed OrdinaryDiffEqNonlinearSolve ──────── v1.19.0 Installed xkbcommon_jll ─────────────────────── v1.13.0+0 Installed Bzip2_jll ─────────────────────────── v1.0.9+0 Installed SimpleBufferStream ────────────────── v1.2.0 Installed ProgressLogging ───────────────────── v0.1.6 Installed BracketingNonlinearSolve ──────────── v1.6.2 Installed SimpleNonlinearSolve ──────────────── v2.10.0 Installed HarfBuzz_jll ──────────────────────── v8.5.1+0 Installed PlotThemes ────────────────────────── v3.3.0 Installed XZ_jll ────────────────────────────── v5.8.2+0 Installed LineSearch ────────────────────────── v0.1.6 Installed IfElse ────────────────────────────── v0.1.1 Installed NonlinearSolveSpectralMethods ─────── v1.6.0 Installed LZO_jll ───────────────────────────── v2.10.3+0 Installed StaticArraysCore ──────────────────── v1.4.4 Installed NaNMath ───────────────────────────── v1.1.3 Installed ThreadingUtilities ────────────────── v0.5.5 Installed fzf_jll ───────────────────────────── v0.61.1+0 Installed TranscodingStreams ────────────────── v0.11.3 Installed FriBidi_jll ───────────────────────── v1.0.17+0 Installed NLSolversBase ─────────────────────── v7.10.0 Installed ManualMemory ──────────────────────── v0.1.8 Installed SparseMatrixColorings ─────────────── v0.4.23 Installed x264_jll ──────────────────────────── v10164.0.1+0 Installed GLFW_jll ──────────────────────────── v3.4.1+0 Installed UnicodeFun ────────────────────────── v0.4.1 Installed ColorSchemes ──────────────────────── v3.31.0 Installed MbedTLS ───────────────────────────── v1.1.9 Installed DataStructures ────────────────────── v0.18.22 Installed FreeType2_jll ─────────────────────── v2.13.4+0 Installed LeftChildRightSiblingTrees ────────── v0.2.1 Installed JLFzf ─────────────────────────────── v0.1.11 Installed CommonSubexpressions ──────────────── v0.3.1 Installed ExprTools ─────────────────────────── v0.1.10 Installed Colors ────────────────────────────── v0.13.1 Installed CodecZlib ─────────────────────────── v0.7.8 Installed CommonWorldInvalidations ──────────── v1.0.0 Installed Compat ────────────────────────────── v4.18.1 Installed StaticArrayInterface ──────────────── v1.8.0 Installed Xorg_libxcb_jll ───────────────────── v1.17.1+0 Installed StatsAPI ──────────────────────────── v1.8.0 Installed StatsBase ─────────────────────────── v0.34.10 Installed OrdinaryDiffEq ────────────────────── v6.106.0 Installed mtdev_jll ─────────────────────────── v1.1.7+0 Installed libpng_jll ────────────────────────── v1.6.54+0 Installed libaom_jll ────────────────────────── v3.13.1+0 Installed ExceptionUnwrapping ───────────────── v0.1.11 Installed ANSIColoredPrinters ───────────────── v0.0.1 Installed SciMLStructures ───────────────────── v1.10.0 Installed OrdinaryDiffEqLinear ──────────────── v1.10.0 Installed Scratch ───────────────────────────── v1.3.0 Installed Dbus_jll ──────────────────────────── v1.16.2+0 Installed BitTwiddlingConvenienceFunctions ──── v0.1.6 Installed ColorTypes ────────────────────────── v0.12.1 Installed oneTBB_jll ────────────────────────── v2022.0.0+1 Installed DiffRules ─────────────────────────── v1.15.1 Installed FunctionWrappersWrappers ──────────── v0.1.3 Installed GenericSchur ──────────────────────── v0.5.6 Installed OrdinaryDiffEqExplicitRK ──────────── v1.8.0 Installed eudev_jll ─────────────────────────── v3.2.14+0 Installed Plots ─────────────────────────────── v1.41.4 Installed LayoutPointers ────────────────────── v0.1.17 Installed Xorg_libXext_jll ──────────────────── v1.3.7+0 Installed TensorCore ────────────────────────── v0.1.1 Installed Zstd_jll ──────────────────────────── v1.5.7+1 Installed Xorg_xcb_util_cursor_jll ──────────── v0.1.6+0 Installed Expat_jll ─────────────────────────── v2.7.3+0 Installed OrdinaryDiffEqPDIRK ───────────────── v1.10.0 Installed DiffResults ───────────────────────── v1.1.0 Installed OrdinaryDiffEqQPRK ────────────────── v1.8.0 Installed Sundials ──────────────────────────── v4.28.0 Installed SciMLOperators ────────────────────── v1.14.1 Installed Parsers ───────────────────────────── v2.8.3 Installed OrdinaryDiffEqLowOrderRK ──────────── v1.10.0 Installed NonlinearSolveBase ────────────────── v2.11.1 Installed OrdinaryDiffEqFunctionMap ─────────── v1.9.0 Installed MKL_jll ───────────────────────────── v2025.2.0+0 Installed Libtiff_jll ───────────────────────── v4.7.2+0 Installed Setfield ──────────────────────────── v1.1.2 Installed DiffEqCallbacks ───────────────────── v2.37.0 Installed Format ────────────────────────────── v1.3.7 Installed JLLWrappers ───────────────────────── v1.7.1 Installed ColorVectorSpace ──────────────────── v0.11.0 Installed NonlinearSolveFirstOrder ──────────── v1.11.1 Installed Libffi_jll ────────────────────────── v3.4.7+0 Installed ExproniconLite ────────────────────── v0.10.14 Installed EnzymeCore ────────────────────────── v0.8.18 Installed ConstructionBase ──────────────────── v1.6.0 Installed AbstractTrees ─────────────────────── v0.4.5 Installed libinput_jll ──────────────────────── v1.28.1+0 Installed Xorg_libXrender_jll ───────────────── v0.9.12+0 Installed libevdev_jll ──────────────────────── v1.13.4+0 Installed FastClosures ──────────────────────── v0.3.2 Installed Ogg_jll ───────────────────────────── v1.3.6+0 Installed OrderedCollections ────────────────── v1.8.1 Installed ChainRulesCore ────────────────────── v1.26.0 Installed OrdinaryDiffEqExponentialRK ───────── v1.12.0 Installed Vulkan_Loader_jll ─────────────────── v1.3.243+0 Installed Xorg_libXi_jll ────────────────────── v1.8.3+0 Installed PolyesterWeave ────────────────────── v0.2.2 Installed ArrayInterface ────────────────────── v7.22.0 Installed Qt6ShaderTools_jll ────────────────── v6.8.2+1 Installed TerminalLoggers ───────────────────── v0.1.7 Installed LineSearches ──────────────────────── v7.5.1 Installed Reexport ──────────────────────────── v1.2.2 Installed Ghostscript_jll ───────────────────── v9.55.1+0 Installed LazilyInitializedFields ───────────── v1.3.0 Installed PreallocationTools ────────────────── v1.1.0 Installed Qt6Declarative_jll ────────────────── v6.8.2+1 Installed OrdinaryDiffEqTsit5 ───────────────── v1.9.0 Installed LogExpFunctions ───────────────────── v0.3.29 Installed OrdinaryDiffEqExtrapolation ───────── v1.13.0 Installed AliasTables ───────────────────────── v1.1.3 Installed CloseOpenIntervals ────────────────── v0.1.13 Installed MbedTLS_jll ───────────────────────── v2.28.1010+0 Installed MacroTools ────────────────────────── v0.5.16 Installed OpenSpecFun_jll ───────────────────── v0.5.6+0 Installed UnPack ────────────────────────────── v1.0.2 Installed Xorg_libXcursor_jll ───────────────── v1.2.4+0 Installed CompositionsBase ──────────────────── v0.1.2 Installed OrdinaryDiffEqLowStorageRK ────────── v1.11.0 Installed Krylov ────────────────────────────── v0.10.5 Installed InverseFunctions ──────────────────── v0.1.17 Installed CommonSolve ───────────────────────── v0.2.6 Installed Libuuid_jll ───────────────────────── v2.41.2+0 Installed Git ───────────────────────────────── v1.5.0 Installed DocStringExtensions ───────────────── v0.9.5 Installed OrdinaryDiffEqStabilizedIRK ───────── v1.10.0 Installed GPUArraysCore ─────────────────────── v0.2.0 Installed Xorg_xcb_util_renderutil_jll ──────── v0.3.10+0 Installed Xorg_libICE_jll ───────────────────── v1.1.2+0 Installed ExponentialUtilities ──────────────── v1.30.0 Installed Adapt ─────────────────────────────── v4.4.0 Installed StableRNGs ────────────────────────── v1.0.4 Installed Graphite2_jll ─────────────────────── v1.3.15+0 Installed libass_jll ────────────────────────── v0.17.4+0 Installed Pixman_jll ────────────────────────── v0.44.2+0 Installed StrideArraysCore ──────────────────── v0.5.8 Installed DifferentiationInterface ──────────── v0.7.15 Installed OrdinaryDiffEqBDF ─────────────────── v1.14.0 Installed OrdinaryDiffEqDifferentiation ─────── v1.22.0 Installed MarkdownAST ───────────────────────── v0.1.2 Installed Latexify ──────────────────────────── v0.16.10 Installed Wayland_jll ───────────────────────── v1.24.0+0 Installed Xorg_xtrans_jll ───────────────────── v1.6.0+0 Installed RuntimeGeneratedFunctions ─────────── v0.5.16 Installed Jieko ─────────────────────────────── v0.2.1 Installed OrdinaryDiffEqHighOrderRK ─────────── v1.9.0 Installed FFMPEG_jll ────────────────────────── v8.0.1+0 Installed BitFlags ──────────────────────────── v0.1.9 Installed Documenter ────────────────────────── v1.16.1 Installed Biofilm ───────────────────────────── v1.2.2 Installed Moshi ─────────────────────────────── v0.3.7 Installed IOCapture ─────────────────────────── v1.0.0 Installed CPUSummary ────────────────────────── v0.2.7 Installed Xorg_xkeyboard_config_jll ─────────── v2.44.0+0 Installed Xorg_libXrandr_jll ────────────────── v1.5.5+0 Installed LLVMOpenMP_jll ────────────────────── v18.1.8+0 Installed DataAPI ───────────────────────────── v1.16.0 Installed FixedPointNumbers ─────────────────── v0.8.5 Installed ConcreteStructs ───────────────────── v0.2.3 Installed OrdinaryDiffEqFeagin ──────────────── v1.8.0 Installed RecipesBase ───────────────────────── v1.3.4 Installed LAME_jll ──────────────────────────── v3.100.3+0 Installed Libiconv_jll ──────────────────────── v1.18.0+0 Installed TruncatedStacktraces ──────────────── v1.4.0 Installed IteratorInterfaceExtensions ───────── v1.0.0 Installed Qt6Wayland_jll ────────────────────── v6.8.2+2 Installed Xorg_libXfixes_jll ────────────────── v6.0.2+0 Installed PrecompileTools ───────────────────── v1.3.3 Installed GettextRuntime_jll ────────────────── v0.22.4+0 Installed Qt6Base_jll ───────────────────────── v6.8.2+2 Installed URIs ──────────────────────────────── v1.6.1 Installed LaTeXStrings ──────────────────────── v1.4.0 Installed Glib_jll ──────────────────────────── v2.86.2+0 Installed libvorbis_jll ─────────────────────── v1.3.8+0 Installed OpenSSH_jll ───────────────────────── v10.2.1+0 Installed Libglvnd_jll ──────────────────────── v1.7.1+1 Installed Xorg_libX11_jll ───────────────────── v1.8.12+0 Installed OrdinaryDiffEqSymplecticRK ────────── v1.11.0 Installed FastBroadcast ─────────────────────── v0.3.5 Installed Requires ──────────────────────────── v1.3.1 Installed Git_LFS_jll ───────────────────────── v3.7.0+0 Installed FillArrays ────────────────────────── v1.16.0 Installed SymbolicIndexingInterface ─────────── v0.3.46 Installed ForwardDiff ───────────────────────── v0.10.39 Installed Xorg_libXdmcp_jll ─────────────────── v1.1.6+0 Installed Unzip ─────────────────────────────── v0.2.0 Installed Parameters ────────────────────────── v0.12.3 Installed StructUtils ───────────────────────── v2.6.2 Installed OrdinaryDiffEqIMEXMultistep ───────── v1.11.0 Installed OrdinaryDiffEqDefault ─────────────── v1.12.0 Installed OrdinaryDiffEqNordsieck ───────────── v1.8.0 Installed SortingAlgorithms ─────────────────── v1.2.2 Installing 81 artifacts Installed artifact Xorg_xcb_util_renderutil 32.1 KiB Installed artifact libevdev 117.1 KiB Installed artifact Xorg_xkbcomp 274.8 KiB Installed artifact Xorg_libSM 164.1 KiB Installed artifact Vulkan_Loader 177.3 KiB Installed artifact Xorg_xcb_util_cursor 27.6 KiB Installed artifact LERC 272.9 KiB Installed artifact HarfBuzz 1.7 MiB Installed artifact xkbcommon 298.7 KiB Installed artifact Xorg_libXi 1.6 MiB Installed artifact libvorbis 271.0 KiB Installed artifact Xorg_libXdmcp 67.7 KiB Installed artifact Git_LFS 9.6 MiB Installed artifact Xorg_libICE 384.9 KiB Installed artifact Libglvnd 833.5 KiB Installed artifact libass 427.8 KiB Installed artifact LAME 292.5 KiB Installed artifact libinput 1.0 MiB Installed artifact Xorg_libXrandr 354.5 KiB Installed artifact Bzip2 503.5 KiB Installed artifact Sundials 2.1 MiB Installed artifact FriBidi 78.9 KiB Installed artifact Dbus 489.8 KiB Installed artifact OpenSpecFun 194.9 KiB Installed artifact Pango 2.0 MiB Installed artifact XZ 1.5 MiB Installed artifact JpegTurbo 1.4 MiB Installed artifact Xorg_libXau 36.6 KiB Installed artifact Xorg_libXrender 435.9 KiB Installed artifact Xorg_xcb_util_image 54.3 KiB Installed artifact Glib 7.7 MiB Installed artifact Qt6ShaderTools 2.1 MiB Installed artifact libaom 6.4 MiB Installed artifact Xorg_libX11 13.9 MiB Installed artifact Xorg_xcb_util_wm 147.9 KiB Installed artifact Zstd 646.0 KiB Installed artifact FFMPEG 11.7 MiB Installed artifact GLFW 180.1 KiB Installed artifact Graphite2 120.2 KiB Installed artifact Libiconv 1.9 MiB Installed artifact eudev 3.9 MiB Installed artifact Wayland 390.6 KiB Installed artifact libdecor 44.1 KiB Installed artifact OpenSSH 4.3 MiB Installed artifact Libtiff 2.3 MiB Installed artifact x264 2.1 MiB Installed artifact LLVMOpenMP 661.6 KiB Installed artifact MbedTLS 2.2 MiB Installed artifact Libmount 6.5 MiB Installed artifact Xorg_xkeyboard_config 537.5 KiB Installed artifact Ogg 250.3 KiB Installed artifact Libffi 44.2 KiB Installed artifact GR 18.7 MiB Installed artifact Qt6Wayland 2.2 MiB Installed artifact Xorg_libxkbfile 486.7 KiB Installed artifact Expat 283.3 KiB Installed artifact LZO 208.9 KiB Installed artifact Xorg_xcb_util_keysyms 17.8 KiB Installed artifact Xorg_xcb_util 39.5 KiB Installed artifact Xorg_libXfixes 59.0 KiB Installed artifact fzf 3.3 MiB Installed artifact Ghostscript 31.4 MiB Installed artifact Opus 960.8 KiB Installed artifact Xorg_xtrans 48.2 KiB Installed artifact GettextRuntime 543.0 KiB Installed artifact Xorg_libXinerama 50.1 KiB Installed artifact Xorg_libXcursor 227.1 KiB Installed artifact Xorg_libXext 699.9 KiB Installed artifact Fontconfig 984.8 KiB Installed artifact Xorg_libxcb 2.1 MiB Installed artifact libfdk_aac 2.8 MiB Installed artifact mtdev 79.6 KiB Installed artifact Pixman 372.2 KiB Installed artifact x265 1.4 MiB Installed artifact libpng 328.7 KiB Installed artifact FreeType2 1.5 MiB Installed artifact Qt6Base 20.6 MiB Installed artifact Cairo 2.2 MiB Installed artifact Libuuid 3.7 MiB Installed artifact Git 49.3 MiB Installed artifact Qt6Declarative 21.6 MiB Updating `~/.julia/environments/v1.12/Project.toml` [210d8ceb] + Biofilm v1.2.2 Updating `~/.julia/environments/v1.12/Manifest.toml` [47edcb42] + ADTypes v1.21.0 [a4c015fc] + ANSIColoredPrinters v0.0.1 [1520ce14] + AbstractTrees v0.4.5 [7d9f7c33] + Accessors v0.1.43 [79e6a3ab] + Adapt v4.4.0 [66dad0bd] + AliasTables v1.1.3 [4fba245c] + ArrayInterface v7.22.0 [210d8ceb] + Biofilm v1.2.2 [d1d4a3ce] + BitFlags v0.1.9 [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 [70df07ce] + BracketingNonlinearSolve v1.6.2 [fa961155] + CEnum v0.5.0 [2a0fbf3d] + CPUSummary v0.2.7 [d360d2e6] + ChainRulesCore v1.26.0 [fb6a15b2] + CloseOpenIntervals v0.1.13 [944b1d66] + CodecZlib v0.7.8 [35d6a980] + ColorSchemes v3.31.0 [3da002f7] + ColorTypes v0.12.1 [c3611d14] + ColorVectorSpace v0.11.0 [5ae59095] + Colors v0.13.1 [38540f10] + CommonSolve v0.2.6 [bbf7d656] + CommonSubexpressions v0.3.1 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.18.1 [a33af91c] + CompositionsBase v0.1.2 [2569d6c7] + ConcreteStructs v0.2.3 [f0e56b4a] + ConcurrentUtilities v2.5.0 [187b0558] + ConstructionBase v1.6.0 [d38c429a] + Contour v0.6.3 [adafc99b] + CpuId v0.3.1 [9a962f9c] + DataAPI v1.16.0 ⌅ [864edb3b] + DataStructures v0.18.22 [8bb1440f] + DelimitedFiles v1.9.1 [2b5f629d] + DiffEqBase v6.199.0 ⌅ [459566f4] + DiffEqCallbacks v2.37.0 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [a0c0ee7d] + DifferentiationInterface v0.7.15 [b4f34e82] + Distances v0.10.12 [ffbed154] + DocStringExtensions v0.9.5 [e30172f5] + Documenter v1.16.1 [4e289a0a] + EnumX v1.0.6 [f151be2c] + EnzymeCore v0.8.18 [460bff9d] + ExceptionUnwrapping v0.1.11 [d4d017d3] + ExponentialUtilities v1.30.0 [e2ba6199] + ExprTools v0.1.10 [55351af7] + ExproniconLite v0.10.14 [c87230d0] + FFMPEG v0.4.5 [7034ab61] + FastBroadcast v0.3.5 [9aa1b823] + FastClosures v0.3.2 [442a2c76] + FastGaussQuadrature v1.1.0 [a4df4552] + FastPower v1.3.0 [1a297f60] + FillArrays v1.16.0 [6a86dc24] + FiniteDiff v2.29.0 [53c48c17] + FixedPointNumbers v0.8.5 [1fa38f19] + Format v1.3.7 ⌅ [f6369f11] + ForwardDiff v0.10.39 [069b7b12] + FunctionWrappers v1.1.3 [77dc65aa] + FunctionWrappersWrappers v0.1.3 ⌅ [d9f16b24] + Functors v0.4.12 [46192b85] + GPUArraysCore v0.2.0 [28b8d3ca] + GR v0.73.21 [c145ed77] + GenericSchur v0.5.6 [d7ba0133] + Git v1.5.0 [42e2da0e] + Grisu v1.0.2 [cd3eb016] + HTTP v1.10.19 [b5f81e59] + IOCapture v1.0.0 [615f187c] + IfElse v0.1.1 [3587e190] + InverseFunctions v0.1.17 [92d709cd] + IrrationalConstants v0.2.6 [82899510] + IteratorInterfaceExtensions v1.0.0 [1019f520] + JLFzf v0.1.11 [692b3bcd] + JLLWrappers v1.7.1 [682c06a0] + JSON v1.4.0 [ae98c720] + Jieko v0.2.1 [ba0b0d4f] + Krylov v0.10.5 [b964fa9f] + LaTeXStrings v1.4.0 [23fbe1c1] + Latexify v0.16.10 [10f19ff3] + LayoutPointers v0.1.17 [0e77f7df] + LazilyInitializedFields v1.3.0 [1d6d02ad] + LeftChildRightSiblingTrees v0.2.1 [87fe0de2] + LineSearch v0.1.6 ⌃ [d3d80556] + LineSearches v7.5.1 [7ed4a6bd] + LinearSolve v3.57.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [e6f89c97] + LoggingExtras v1.2.0 [1914dd2f] + MacroTools 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[becaefa8] + OrdinaryDiffEqExtrapolation v1.13.0 [5960d6e9] + OrdinaryDiffEqFIRK v1.20.0 [101fe9f7] + OrdinaryDiffEqFeagin v1.8.0 [d3585ca7] + OrdinaryDiffEqFunctionMap v1.9.0 [d28bc4f8] + OrdinaryDiffEqHighOrderRK v1.9.0 [9f002381] + OrdinaryDiffEqIMEXMultistep v1.11.0 [521117fe] + OrdinaryDiffEqLinear v1.10.0 [1344f307] + OrdinaryDiffEqLowOrderRK v1.10.0 [b0944070] + OrdinaryDiffEqLowStorageRK v1.11.0 [127b3ac7] + OrdinaryDiffEqNonlinearSolve v1.19.0 [c9986a66] + OrdinaryDiffEqNordsieck v1.8.0 [5dd0a6cf] + OrdinaryDiffEqPDIRK v1.10.0 [5b33eab2] + OrdinaryDiffEqPRK v1.8.0 [04162be5] + OrdinaryDiffEqQPRK v1.8.0 [af6ede74] + OrdinaryDiffEqRKN v1.9.0 [43230ef6] + OrdinaryDiffEqRosenbrock v1.22.0 [2d112036] + OrdinaryDiffEqSDIRK v1.11.0 [669c94d9] + OrdinaryDiffEqSSPRK v1.11.0 [e3e12d00] + OrdinaryDiffEqStabilizedIRK v1.10.0 [358294b1] + OrdinaryDiffEqStabilizedRK v1.8.0 [fa646aed] + OrdinaryDiffEqSymplecticRK v1.11.0 [b1df2697] + OrdinaryDiffEqTsit5 v1.9.0 [79d7bb75] + OrdinaryDiffEqVerner v1.10.0 [d96e819e] + Parameters v0.12.3 [69de0a69] + Parsers v2.8.3 [ccf2f8ad] + PlotThemes v3.3.0 [995b91a9] + PlotUtils v1.4.4 [91a5bcdd] + Plots v1.41.4 [f517fe37] + Polyester v0.7.18 [1d0040c9] + PolyesterWeave v0.2.2 [d236fae5] + PreallocationTools v1.1.0 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.1 [33c8b6b6] + ProgressLogging v0.1.6 [92933f4c] + ProgressMeter v1.11.0 [43287f4e] + PtrArrays v1.3.0 [3cdcf5f2] + RecipesBase v1.3.4 [01d81517] + RecipesPipeline v0.6.12 [731186ca] + RecursiveArrayTools v3.46.0 [189a3867] + Reexport v1.2.2 [2792f1a3] + RegistryInstances v0.1.0 [05181044] + RelocatableFolders v1.0.1 [ae029012] + Requires v1.3.1 [7e49a35a] + RuntimeGeneratedFunctions v0.5.16 [94e857df] + SIMDTypes v0.1.0 [0bca4576] + SciMLBase v2.135.0 [19f34311] + SciMLJacobianOperators v0.1.12 [a6db7da4] + SciMLLogging v1.8.0 [c0aeaf25] + SciMLOperators v1.14.1 [431bcebd] + SciMLPublic v1.0.1 [53ae85a6] + SciMLStructures v1.10.0 [6c6a2e73] + Scratch v1.3.0 [efcf1570] + Setfield v1.1.2 [992d4aef] + Showoff v1.0.3 [777ac1f9] + SimpleBufferStream v1.2.0 [727e6d20] + SimpleNonlinearSolve v2.10.0 [a2af1166] + SortingAlgorithms v1.2.2 [0a514795] + SparseMatrixColorings v0.4.23 [276daf66] + SpecialFunctions v2.6.1 [860ef19b] + StableRNGs v1.0.4 [aedffcd0] + Static v1.3.1 [0d7ed370] + StaticArrayInterface v1.8.0 [90137ffa] + StaticArrays v1.9.16 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 [2913bbd2] + StatsBase v0.34.10 [7792a7ef] + StrideArraysCore v0.5.8 [ec057cc2] + StructUtils v2.6.2 ⌅ [c3572dad] + Sundials v4.28.0 [2efcf032] + SymbolicIndexingInterface v0.3.46 [62fd8b95] + TensorCore v0.1.1 [5d786b92] + TerminalLoggers v0.1.7 [8290d209] + ThreadingUtilities v0.5.5 [a759f4b9] + TimerOutputs v0.5.29 [3bb67fe8] + TranscodingStreams v0.11.3 [781d530d] + TruncatedStacktraces v1.4.0 [5c2747f8] + URIs v1.6.1 [3a884ed6] + UnPack v1.0.2 [1cfade01] + UnicodeFun v0.4.1 [41fe7b60] + Unzip v0.2.0 [6e34b625] + Bzip2_jll v1.0.9+0 [83423d85] + Cairo_jll v1.18.5+0 [ee1fde0b] + Dbus_jll v1.16.2+0 [2702e6a9] + EpollShim_jll v0.0.20230411+1 [2e619515] + Expat_jll v2.7.3+0 [b22a6f82] + FFMPEG_jll v8.0.1+0 [a3f928ae] + Fontconfig_jll v2.17.1+0 [d7e528f0] + FreeType2_jll v2.13.4+0 [559328eb] + FriBidi_jll v1.0.17+0 [0656b61e] + GLFW_jll v3.4.1+0 [d2c73de3] + GR_jll v0.73.21+0 [b0724c58] + GettextRuntime_jll v0.22.4+0 [61579ee1] + Ghostscript_jll v9.55.1+0 [020c3dae] + Git_LFS_jll v3.7.0+0 [f8c6e375] + Git_jll v2.52.0+0 [7746bdde] + Glib_jll v2.86.2+0 [3b182d85] + Graphite2_jll v1.3.15+0 [2e76f6c2] + HarfBuzz_jll v8.5.1+0 [1d5cc7b8] + IntelOpenMP_jll v2025.2.0+0 [aacddb02] + JpegTurbo_jll v3.1.4+0 [c1c5ebd0] + LAME_jll v3.100.3+0 [88015f11] + LERC_jll v4.0.1+0 [1d63c593] + LLVMOpenMP_jll v18.1.8+0 [dd4b983a] + LZO_jll v2.10.3+0 ⌅ [e9f186c6] + Libffi_jll v3.4.7+0 [7e76a0d4] + Libglvnd_jll v1.7.1+1 [94ce4f54] + Libiconv_jll v1.18.0+0 [4b2f31a3] + Libmount_jll v2.41.2+0 [89763e89] + Libtiff_jll v4.7.2+0 [38a345b3] + Libuuid_jll v2.41.2+0 [856f044c] + MKL_jll v2025.2.0+0 [c8ffd9c3] + MbedTLS_jll v2.28.1010+0 [e7412a2a] + Ogg_jll v1.3.6+0 [9bd350c2] + OpenSSH_jll v10.2.1+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [91d4177d] + Opus_jll v1.6.0+0 [36c8627f] + Pango_jll v1.57.0+0 ⌅ [30392449] + Pixman_jll v0.44.2+0 [c0090381] + Qt6Base_jll v6.8.2+2 [629bc702] + Qt6Declarative_jll v6.8.2+1 [ce943373] + Qt6ShaderTools_jll v6.8.2+1 [e99dba38] + Qt6Wayland_jll v6.8.2+2 ⌅ [fb77eaff] + Sundials_jll v5.2.3+0 [a44049a8] + Vulkan_Loader_jll v1.3.243+0 [a2964d1f] + Wayland_jll v1.24.0+0 [ffd25f8a] + XZ_jll v5.8.2+0 [f67eecfb] + Xorg_libICE_jll v1.1.2+0 [c834827a] + Xorg_libSM_jll v1.2.6+0 [4f6342f7] + Xorg_libX11_jll v1.8.12+0 [0c0b7dd1] + Xorg_libXau_jll v1.0.13+0 [935fb764] + Xorg_libXcursor_jll v1.2.4+0 [a3789734] + Xorg_libXdmcp_jll v1.1.6+0 [1082639a] + Xorg_libXext_jll v1.3.7+0 [d091e8ba] + Xorg_libXfixes_jll v6.0.2+0 [a51aa0fd] + Xorg_libXi_jll v1.8.3+0 [d1454406] + Xorg_libXinerama_jll v1.1.6+0 [ec84b674] + Xorg_libXrandr_jll v1.5.5+0 [ea2f1a96] + Xorg_libXrender_jll v0.9.12+0 [c7cfdc94] + Xorg_libxcb_jll v1.17.1+0 [cc61e674] + Xorg_libxkbfile_jll v1.1.3+0 [e920d4aa] + Xorg_xcb_util_cursor_jll v0.1.6+0 [12413925] + Xorg_xcb_util_image_jll v0.4.1+0 [2def613f] + Xorg_xcb_util_jll v0.4.1+0 [975044d2] + Xorg_xcb_util_keysyms_jll v0.4.1+0 [0d47668e] + Xorg_xcb_util_renderutil_jll v0.3.10+0 [c22f9ab0] + Xorg_xcb_util_wm_jll v0.4.2+0 [35661453] + Xorg_xkbcomp_jll v1.4.7+0 [33bec58e] + Xorg_xkeyboard_config_jll v2.44.0+0 [c5fb5394] + Xorg_xtrans_jll v1.6.0+0 [3161d3a3] + Zstd_jll v1.5.7+1 [35ca27e7] + eudev_jll v3.2.14+0 [214eeab7] + fzf_jll v0.61.1+0 [a4ae2306] + libaom_jll v3.13.1+0 [0ac62f75] + libass_jll v0.17.4+0 [1183f4f0] + libdecor_jll v0.2.2+0 [2db6ffa8] + libevdev_jll v1.13.4+0 [f638f0a6] + libfdk_aac_jll v2.0.4+0 [36db933b] + libinput_jll v1.28.1+0 [b53b4c65] + libpng_jll v1.6.54+0 [f27f6e37] + libvorbis_jll v1.3.8+0 [009596ad] + mtdev_jll v1.1.7+0 [1317d2d5] + oneTBB_jll v2022.0.0+1 ⌅ [1270edf5] + x264_jll v10164.0.1+0 [dfaa095f] + x265_jll v4.1.0+0 [d8fb68d0] + xkbcommon_jll v1.13.0+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.12.1 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.15.0+0 [e37daf67] + LibGit2_jll v1.9.0+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.11.4 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [efcefdf7] + PCRE2_jll v10.44.0+1 [bea87d4a] + SuiteSparse_jll v7.8.3+2 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.64.0+1 [3f19e933] + p7zip_jll v17.7.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Installation completed after 45.83s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... 4854.3 ms ✓ TestEnv 1 dependency successfully precompiled in 5 seconds. 26 already precompiled. Precompiling package dependencies... Precompiling packages... 4157.5 ms ✓ FunctionWrappers 762.6 ms ✓ MuladdMacro 751.7 ms ✓ ConcreteStructs 790.6 ms ✓ LaTeXStrings 821.2 ms ✓ ExprTools 681.1 ms ✓ IteratorInterfaceExtensions 825.5 ms ✓ TensorCore 894.7 ms ✓ StatsAPI 1392.1 ms ✓ ADTypes 836.1 ms ✓ Contour 3435.6 ms ✓ CEnum 6430.4 ms ✓ ExproniconLite 1023.7 ms ✓ ANSIColoredPrinters 2473.1 ms ✓ Format 754.7 ms ✓ UnPack 2038.3 ms ✓ FillArrays 854.6 ms ✓ Measures 918.3 ms ✓ InverseFunctions 1076.0 ms ✓ Statistics 794.1 ms ✓ CommonSolve 7314.6 ms ✓ MacroTools 4276.4 ms ✓ Grisu 1034.0 ms ✓ ManualMemory 3881.4 ms ✓ OrderedCollections 1249.5 ms ✓ Requires 904.1 ms ✓ EnumX 964.4 ms ✓ StableRNGs 3759.9 ms ✓ Unzip 717.9 ms ✓ Reexport 717.1 ms ✓ SIMDTypes 1193.4 ms ✓ DocStringExtensions 1086.3 ms ✓ AbstractTrees 5183.5 ms ✓ IrrationalConstants 1217.3 ms ✓ URIs 717.2 ms ✓ SimpleBufferStream 919.1 ms ✓ CompositionsBase 952.0 ms ✓ PtrArrays 1189.8 ms ✓ TranscodingStreams 867.3 ms ✓ FastPower 4098.8 ms ✓ NaNMath 1069.6 ms ✓ DelimitedFiles 984.5 ms ✓ LazilyInitializedFields 1281.8 ms ✓ EnzymeCore 883.0 ms ✓ IfElse 4135.3 ms ✓ ConstructionBase 802.2 ms ✓ CommonWorldInvalidations 912.9 ms ✓ DataAPI 1046.7 ms ✓ ProgressLogging 855.0 ms ✓ FastClosures 803.9 ms ✓ BitFlags 4334.6 ms ✓ Functors 841.9 ms ✓ SciMLPublic 923.7 ms ✓ StaticArraysCore 2419.8 ms ✓ ConcurrentUtilities 889.1 ms ✓ IOCapture 2620.0 ms ✓ GenericSchur 14338.5 ms ✓ Krylov 1555.9 ms ✓ ProgressMeter 3484.4 ms ✓ StructUtils 837.0 ms ✓ Scratch 976.9 ms ✓ LoggingExtras 1823.3 ms ✓ CpuId 1065.1 ms ✓ Preferences 3727.9 ms ✓ Compat 2973.1 ms ✓ UnicodeFun 1570.3 ms ✓ ExceptionUnwrapping 733.9 ms ✓ FunctionWrappersWrappers 3575.4 ms ✓ RuntimeGeneratedFunctions 5834.7 ms ✓ TimerOutputs 4786.5 ms ✓ DifferentiationInterface 3255.9 ms ✓ Jieko 1395.0 ms ✓ FillArrays → FillArraysSparseArraysExt 1699.0 ms ✓ InverseFunctions → InverseFunctionsTestExt 870.2 ms ✓ InverseFunctions → InverseFunctionsDatesExt 6299.6 ms ✓ FixedPointNumbers 4435.0 ms ✓ Distances 1218.7 ms ✓ Statistics → SparseArraysExt 857.7 ms ✓ FillArrays → FillArraysStatisticsExt 1521.2 ms ✓ CommonSubexpressions 807.5 ms ✓ Showoff 4682.8 ms ✓ ThreadingUtilities 894.5 ms ✓ Parameters 876.0 ms ✓ Adapt 826.0 ms ✓ LeftChildRightSiblingTrees 1713.8 ms ✓ MarkdownAST 1442.3 ms ✓ LogExpFunctions 878.4 ms ✓ CompositionsBase → CompositionsBaseInverseFunctionsExt 1074.9 ms ✓ AliasTables 902.0 ms ✓ CodecZlib 4677.3 ms ✓ RegistryInstances 767.5 ms ✓ ADTypes → ADTypesEnzymeCoreExt 878.1 ms ✓ ConstructionBase → ConstructionBaseLinearAlgebraExt 977.1 ms ✓ ADTypes → ADTypesConstructionBaseExt 3853.5 ms ✓ Missings 4406.9 ms ✓ OpenSSL 789.4 ms ✓ DiffResults 1075.8 ms ✓ RelocatableFolders 1132.7 ms ✓ JLLWrappers 930.9 ms ✓ PrecompileTools 1534.2 ms ✓ TruncatedStacktraces 1497.9 ms ✓ SciMLLogging 1081.9 ms ✓ Compat → CompatLinearAlgebraExt 1281.4 ms ✓ DifferentiationInterface → DifferentiationInterfaceSparseArraysExt 22482.5 ms ✓ Moshi 5836.5 ms ✓ ColorTypes 1446.7 ms ✓ Distances → DistancesSparseArraysExt 1488.6 ms ✓ Adapt → AdaptSparseArraysExt 4414.8 ms ✓ ArrayInterface 1322.3 ms ✓ GPUArraysCore 739.6 ms ✓ EnzymeCore → AdaptExt 1923.6 ms ✓ TerminalLoggers 770.0 ms ✓ LogExpFunctions → LogExpFunctionsInverseFunctionsExt 3078.3 ms ✓ Setfield 8270.1 ms ✓ Accessors 1591.3 ms ✓ Graphite2_jll 1479.1 ms ✓ Libmount_jll 1045.3 ms ✓ EpollShim_jll 1329.8 ms ✓ LLVMOpenMP_jll 1329.3 ms ✓ Bzip2_jll 1336.8 ms ✓ Xorg_libICE_jll 1477.1 ms ✓ Xorg_libXau_jll 1333.9 ms ✓ libpng_jll 1291.7 ms ✓ libfdk_aac_jll 4269.0 ms ✓ IntelOpenMP_jll 1449.5 ms ✓ LAME_jll 1506.7 ms ✓ LERC_jll 1430.4 ms ✓ fzf_jll 1386.4 ms ✓ JpegTurbo_jll 1573.3 ms ✓ XZ_jll 1574.5 ms ✓ Ogg_jll 1560.8 ms ✓ mtdev_jll 5382.2 ms ✓ oneTBB_jll 1424.4 ms ✓ Xorg_libXdmcp_jll 1427.3 ms ✓ x265_jll 1309.0 ms ✓ x264_jll 1550.4 ms ✓ libaom_jll 1594.3 ms ✓ MbedTLS_jll 1591.9 ms ✓ Zstd_jll 1526.8 ms ✓ Expat_jll 1418.5 ms ✓ LZO_jll 1485.8 ms ✓ Sundials_jll 1501.7 ms ✓ OpenSSH_jll 1374.0 ms ✓ Opus_jll 1277.4 ms ✓ Xorg_xtrans_jll 1428.4 ms ✓ libevdev_jll 1527.7 ms ✓ Libiconv_jll 1589.6 ms ✓ Libffi_jll 1359.2 ms ✓ eudev_jll 1538.2 ms ✓ Git_LFS_jll 1585.9 ms ✓ OpenSpecFun_jll 1372.7 ms ✓ Libuuid_jll 1581.1 ms ✓ FriBidi_jll 18586.9 ms ✓ StaticArrays 3364.0 ms ✓ RecipesBase 22427.4 ms ✓ Parsers 14440.6 ms ✓ SparseMatrixColorings 8799.0 ms ✓ Static 4031.8 ms ✓ DataStructures 4915.5 ms ✓ ChainRulesCore 6192.8 ms ✓ ColorVectorSpace 1235.1 ms ✓ ColorTypes → StyledStringsExt 9621.6 ms ✓ Colors 1881.3 ms ✓ MaybeInplace 1271.4 ms ✓ ArrayInterface → ArrayInterfaceSparseArraysExt 714.6 ms ✓ ArrayInterface → ArrayInterfaceStaticArraysCoreExt 4216.0 ms ✓ SciMLStructures 2451.3 ms ✓ PreallocationTools 774.8 ms ✓ DifferentiationInterface → DifferentiationInterfaceGPUArraysCoreExt 752.3 ms ✓ ArrayInterface → ArrayInterfaceGPUArraysCoreExt 2004.9 ms ✓ Accessors → LinearAlgebraExt 1860.2 ms ✓ Accessors → TestExt 1353.3 ms ✓ Pixman_jll 1397.8 ms ✓ FreeType2_jll 1517.0 ms ✓ Xorg_libSM_jll 1854.3 ms ✓ JLFzf 1444.9 ms ✓ Ghostscript_jll 1354.3 ms ✓ libvorbis_jll 9117.6 ms ✓ MKL_jll 1436.4 ms ✓ Xorg_libxcb_jll 2037.1 ms ✓ MbedTLS 1654.4 ms ✓ Libtiff_jll 1396.0 ms ✓ Dbus_jll 1567.4 ms ✓ GettextRuntime_jll 1492.0 ms ✓ Git_jll 1411.4 ms ✓ Wayland_jll 1474.9 ms ✓ libinput_jll 5427.5 ms ✓ SpecialFunctions 1324.1 ms ✓ StaticArrays → StaticArraysStatisticsExt 1491.6 ms ✓ FillArrays → FillArraysStaticArraysExt 1420.4 ms ✓ ConstructionBase → ConstructionBaseStaticArraysExt 1286.7 ms ✓ DifferentiationInterface → DifferentiationInterfaceStaticArraysExt 1256.6 ms ✓ Adapt → AdaptStaticArraysExt 1616.9 ms ✓ Accessors → StaticArraysExt 9737.0 ms ✓ JSON 1884.6 ms ✓ DifferentiationInterface → DifferentiationInterfaceSparseMatrixColoringsExt 840.8 ms ✓ BitTwiddlingConvenienceFunctions 2498.4 ms ✓ CPUSummary 9342.5 ms ✓ StaticArrayInterface 2010.1 ms ✓ SortingAlgorithms 3991.4 ms ✓ ChainRulesCore → ChainRulesCoreSparseArraysExt 910.4 ms ✓ ADTypes → ADTypesChainRulesCoreExt 1231.4 ms ✓ EnzymeCore → EnzymeCoreChainRulesCoreExt 845.7 ms ✓ DifferentiationInterface → DifferentiationInterfaceChainRulesCoreExt 1028.4 ms ✓ Distances → DistancesChainRulesCoreExt 3869.3 ms ✓ LogExpFunctions → LogExpFunctionsChainRulesCoreExt 1030.0 ms ✓ ArrayInterface → ArrayInterfaceChainRulesCoreExt 4340.1 ms ✓ StaticArrays → StaticArraysChainRulesCoreExt 3248.2 ms ✓ SparseMatrixColorings → SparseMatrixColoringsColorsExt 8374.6 ms ✓ ColorSchemes 1399.6 ms ✓ MaybeInplace → MaybeInplaceSparseArraysExt 1268.1 ms ✓ FiniteDiff 44993.3 ms ✓ ExponentialUtilities 7125.0 ms ✓ SciMLOperators 6031.0 ms ✓ SymbolicIndexingInterface 1744.7 ms ✓ Fontconfig_jll 9968.0 ms ✓ Latexify 1503.9 ms ✓ Xorg_xcb_util_jll 1463.7 ms ✓ Xorg_libX11_jll 31685.3 ms ✓ HTTP 1391.8 ms ✓ Glib_jll 947.1 ms ✓ Git 3969.3 ms ✓ FastGaussQuadrature 4308.8 ms ✓ SpecialFunctions → SpecialFunctionsChainRulesCoreExt 1239.8 ms ✓ DiffRules 1205.4 ms ✓ ColorVectorSpace → SpecialFunctionsExt 1673.7 ms ✓ PolyesterWeave 1474.1 ms ✓ StaticArrayInterface → StaticArrayInterfaceStaticArraysExt 1401.8 ms ✓ CloseOpenIntervals 1272.6 ms ✓ LayoutPointers 8221.3 ms ✓ StatsBase 20320.5 ms ✓ PlotUtils 1289.9 ms ✓ FiniteDiff → FiniteDiffSparseArraysExt 1331.6 ms ✓ FiniteDiff → FiniteDiffStaticArraysExt 962.8 ms ✓ DifferentiationInterface → DifferentiationInterfaceFiniteDiffExt 4997.0 ms ✓ ExponentialUtilities → ExponentialUtilitiesStaticArraysExt 1201.8 ms ✓ SciMLOperators → SciMLOperatorsStaticArraysCoreExt 1648.2 ms ✓ SciMLOperators → SciMLOperatorsSparseArraysExt 11251.9 ms ✓ RecursiveArrayTools 2394.8 ms ✓ Latexify → SparseArraysExt 1427.1 ms ✓ Xorg_xcb_util_image_jll 1349.5 ms ✓ Xorg_xcb_util_keysyms_jll 1388.6 ms ✓ Xorg_xcb_util_renderutil_jll 1619.2 ms ✓ Xorg_xcb_util_wm_jll 1389.1 ms ✓ Xorg_libXrender_jll 1340.0 ms ✓ Xorg_libXext_jll 1418.3 ms ✓ Xorg_libXfixes_jll 1615.3 ms ✓ Xorg_libxkbfile_jll 55392.9 ms ✓ Documenter 11851.6 ms ✓ ForwardDiff 1990.6 ms ✓ StrideArraysCore 9470.7 ms ✓ PlotThemes 9015.0 ms ✓ RecipesPipeline 1282.5 ms ✓ RecursiveArrayTools → RecursiveArrayToolsStatisticsExt 1991.2 ms ✓ RecursiveArrayTools → RecursiveArrayToolsSparseArraysExt 1365.9 ms ✓ Xorg_xcb_util_cursor_jll 1455.7 ms ✓ Xorg_libXinerama_jll 1482.0 ms ✓ Xorg_libXrandr_jll 1540.8 ms ✓ Libglvnd_jll 1492.1 ms ✓ Cairo_jll 1352.4 ms ✓ Xorg_libXcursor_jll 1499.8 ms ✓ Xorg_libXi_jll 1369.3 ms ✓ Xorg_xkbcomp_jll 3925.2 ms ✓ ForwardDiff → ForwardDiffStaticArraysExt 3315.1 ms ✓ FastPower → FastPowerForwardDiffExt 4187.7 ms ✓ DifferentiationInterface → DifferentiationInterfaceForwardDiffExt 2323.9 ms ✓ PreallocationTools → PreallocationToolsForwardDiffExt 1476.7 ms ✓ RecursiveArrayTools → RecursiveArrayToolsForwardDiffExt 5046.6 ms ✓ Polyester 36064.7 ms ✓ SciMLBase 1539.7 ms ✓ HarfBuzz_jll 1199.5 ms ✓ Xorg_xkeyboard_config_jll 4385.4 ms ✓ NLSolversBase 2020.8 ms ✓ FastBroadcast 3350.5 ms ✓ SciMLBase → SciMLBaseChainRulesCoreExt 3615.8 ms ✓ SciMLBase → SciMLBaseDifferentiationInterfaceExt 8894.5 ms ✓ SciMLBase → SciMLBaseForwardDiffExt 1460.3 ms ✓ libass_jll 1430.6 ms ✓ Pango_jll 1381.5 ms ✓ xkbcommon_jll 7686.7 ms ✓ LineSearches 2596.4 ms ✓ RecursiveArrayTools → RecursiveArrayToolsFastBroadcastExt 22031.2 ms ✓ LinearSolve 11496.6 ms ✓ SciMLJacobianOperators 1703.7 ms ✓ FFMPEG_jll 1446.0 ms ✓ Vulkan_Loader_jll 1614.7 ms ✓ libdecor_jll 5018.4 ms ✓ NLsolve 9077.7 ms ✓ LinearSolve → LinearSolveForwardDiffExt 9863.3 ms ✓ LinearSolve → LinearSolveSparseArraysExt 14395.6 ms ✓ LineSearch 23522.5 ms ✓ NonlinearSolveBase 1205.4 ms ✓ FFMPEG 1558.2 ms ✓ Qt6Base_jll 1461.1 ms ✓ GLFW_jll 4796.5 ms ✓ LinearSolve → LinearSolveEnzymeExt 3753.0 ms ✓ LineSearch → LineSearchLineSearchesExt 3953.3 ms ✓ NonlinearSolveBase → NonlinearSolveBaseSparseMatrixColoringsExt 6741.2 ms ✓ NonlinearSolveBase → NonlinearSolveBaseForwardDiffExt 4050.7 ms ✓ NonlinearSolveBase → NonlinearSolveBaseSparseArraysExt 3619.8 ms ✓ NonlinearSolveBase → NonlinearSolveBaseLineSearchExt 7577.2 ms ✓ NonlinearSolveBase → NonlinearSolveBaseLinearSolveExt 3436.1 ms ✓ NonlinearSolveBase → NonlinearSolveBaseChainRulesCoreExt 10041.8 ms ✓ BracketingNonlinearSolve 1696.6 ms ✓ Qt6ShaderTools_jll 1704.8 ms ✓ GR_jll 19970.5 ms ✓ NonlinearSolveSpectralMethods 37251.3 ms ✓ NonlinearSolveQuasiNewton 56159.7 ms ✓ NonlinearSolveFirstOrder 3699.1 ms ✓ BracketingNonlinearSolve → BracketingNonlinearSolveForwardDiffExt 8420.0 ms ✓ DiffEqBase 1637.2 ms ✓ Qt6Declarative_jll 5007.4 ms ✓ NonlinearSolveSpectralMethods → NonlinearSolveSpectralMethodsForwardDiffExt 6299.3 ms ✓ NonlinearSolveQuasiNewton → NonlinearSolveQuasiNewtonForwardDiffExt 4322.9 ms ✓ BracketingNonlinearSolve → BracketingNonlinearSolveChainRulesCoreExt 24728.9 ms ✓ SimpleNonlinearSolve 4861.5 ms ✓ DiffEqBase → DiffEqBaseChainRulesCoreExt 6410.7 ms ✓ DiffEqBase → DiffEqBaseForwardDiffExt 4547.4 ms ✓ DiffEqBase → DiffEqBaseSparseArraysExt 15489.4 ms ✓ OrdinaryDiffEqCore 1716.8 ms ✓ Qt6Wayland_jll 4374.3 ms ✓ SimpleNonlinearSolve → SimpleNonlinearSolveChainRulesCoreExt 11150.7 ms ✓ DiffEqCallbacks 27917.7 ms ✓ Sundials 4245.8 ms ✓ OrdinaryDiffEqCore → OrdinaryDiffEqCoreEnzymeCoreExt 7115.7 ms ✓ GR 38076.4 ms ✓ NonlinearSolve 7086.1 ms ✓ OrdinaryDiffEqExplicitRK 9512.7 ms ✓ OrdinaryDiffEqHighOrderRK 9039.1 ms ✓ OrdinaryDiffEqStabilizedRK 8090.0 ms ✓ OrdinaryDiffEqSymplecticRK 8990.3 ms ✓ OrdinaryDiffEqSSPRK 9342.3 ms ✓ OrdinaryDiffEqLowOrderRK 5647.9 ms ✓ OrdinaryDiffEqFunctionMap 10069.7 ms ✓ OrdinaryDiffEqLinear 16749.9 ms ✓ OrdinaryDiffEqTsit5 74403.5 ms ✓ OrdinaryDiffEqVerner 7819.7 ms ✓ OrdinaryDiffEqPRK 9188.3 ms ✓ OrdinaryDiffEqRKN 7559.4 ms ✓ OrdinaryDiffEqFeagin 6904.1 ms ✓ OrdinaryDiffEqQPRK 10040.2 ms ✓ OrdinaryDiffEqLowStorageRK 18514.8 ms ✓ OrdinaryDiffEqDifferentiation 119028.5 ms ✓ Plots 9003.1 ms ✓ NonlinearSolve → NonlinearSolveNLsolveExt 10231.1 ms ✓ NonlinearSolve → NonlinearSolveSundialsExt 7807.2 ms ✓ OrdinaryDiffEqAdamsBashforthMoulton 6162.3 ms ✓ OrdinaryDiffEqNordsieck 6552.2 ms ✓ OrdinaryDiffEqDifferentiation → OrdinaryDiffEqDifferentiationSparseArraysExt 16646.4 ms ✓ OrdinaryDiffEqExponentialRK 16027.2 ms ✓ OrdinaryDiffEqExtrapolation 51542.9 ms ✓ OrdinaryDiffEqRosenbrock 21131.9 ms ✓ OrdinaryDiffEqNonlinearSolve 19611.8 ms ✓ OrdinaryDiffEqPDIRK 15025.1 ms ✓ OrdinaryDiffEqStabilizedIRK 17995.7 ms ✓ OrdinaryDiffEqSDIRK 61077.7 ms ✓ OrdinaryDiffEqFIRK 15127.0 ms ✓ OrdinaryDiffEqIMEXMultistep 36784.5 ms ✓ OrdinaryDiffEqBDF 78597.1 ms ✓ OrdinaryDiffEqDefault 23416.5 ms ✓ OrdinaryDiffEq 83335.9 ms ✓ Biofilm 361 dependencies successfully precompiled in 2203 seconds. 39 already precompiled. 1 dependency had output during precompilation: ┌ MKL_jll │ Downloading artifact: IntelOpenMP │ Downloading artifact: oneTBB └ Precompilation completed after 2220.43s ################################################################################ # Testing # Testing Biofilm Status `/tmp/jl_OZFQaC/Project.toml` [7d9f7c33] Accessors v0.1.43 [210d8ceb] Biofilm v1.2.2 ⌅ [459566f4] DiffEqCallbacks v2.37.0 [e30172f5] Documenter v1.16.1 [b964fa9f] LaTeXStrings v1.4.0 [442fdcdd] Measures v0.3.3 [1dea7af3] OrdinaryDiffEq v6.106.0 [d96e819e] Parameters v0.12.3 [91a5bcdd] Plots v1.41.4 [aea7be01] PrecompileTools v1.3.3 [92933f4c] ProgressMeter v1.11.0 [10745b16] Statistics v1.11.1 ⌅ [c3572dad] Sundials v4.28.0 [5d786b92] TerminalLoggers v0.1.7 [3a884ed6] UnPack v1.0.2 [56ddb016] Logging v1.11.0 [de0858da] Printf v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_OZFQaC/Manifest.toml` [47edcb42] ADTypes v1.21.0 [a4c015fc] ANSIColoredPrinters v0.0.1 [1520ce14] AbstractTrees v0.4.5 [7d9f7c33] Accessors v0.1.43 [79e6a3ab] Adapt v4.4.0 [66dad0bd] AliasTables v1.1.3 [4fba245c] ArrayInterface v7.22.0 [210d8ceb] Biofilm v1.2.2 [d1d4a3ce] BitFlags v0.1.9 [62783981] BitTwiddlingConvenienceFunctions v0.1.6 [70df07ce] BracketingNonlinearSolve v1.6.2 [fa961155] CEnum v0.5.0 [2a0fbf3d] CPUSummary v0.2.7 [d360d2e6] ChainRulesCore v1.26.0 [fb6a15b2] CloseOpenIntervals v0.1.13 [944b1d66] CodecZlib v0.7.8 [35d6a980] ColorSchemes v3.31.0 [3da002f7] ColorTypes v0.12.1 [c3611d14] ColorVectorSpace v0.11.0 [5ae59095] Colors v0.13.1 [38540f10] CommonSolve v0.2.6 [bbf7d656] CommonSubexpressions v0.3.1 [f70d9fcc] CommonWorldInvalidations v1.0.0 [34da2185] Compat v4.18.1 [a33af91c] CompositionsBase v0.1.2 [2569d6c7] ConcreteStructs v0.2.3 [f0e56b4a] ConcurrentUtilities v2.5.0 [187b0558] ConstructionBase v1.6.0 [d38c429a] Contour v0.6.3 [adafc99b] CpuId v0.3.1 [9a962f9c] DataAPI v1.16.0 ⌅ [864edb3b] DataStructures v0.18.22 [8bb1440f] DelimitedFiles v1.9.1 [2b5f629d] DiffEqBase v6.199.0 ⌅ [459566f4] DiffEqCallbacks v2.37.0 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [a0c0ee7d] DifferentiationInterface v0.7.15 [b4f34e82] Distances v0.10.12 [ffbed154] DocStringExtensions v0.9.5 [e30172f5] Documenter v1.16.1 [4e289a0a] EnumX v1.0.6 [f151be2c] EnzymeCore v0.8.18 [460bff9d] ExceptionUnwrapping v0.1.11 [d4d017d3] ExponentialUtilities v1.30.0 [e2ba6199] ExprTools v0.1.10 [55351af7] ExproniconLite v0.10.14 [c87230d0] FFMPEG v0.4.5 [7034ab61] FastBroadcast v0.3.5 [9aa1b823] FastClosures v0.3.2 [442a2c76] FastGaussQuadrature v1.1.0 [a4df4552] FastPower v1.3.0 [1a297f60] FillArrays v1.16.0 [6a86dc24] FiniteDiff v2.29.0 [53c48c17] FixedPointNumbers v0.8.5 [1fa38f19] Format v1.3.7 ⌅ [f6369f11] ForwardDiff v0.10.39 [069b7b12] FunctionWrappers v1.1.3 [77dc65aa] FunctionWrappersWrappers v0.1.3 ⌅ [d9f16b24] Functors v0.4.12 [46192b85] GPUArraysCore v0.2.0 [28b8d3ca] GR v0.73.21 [c145ed77] GenericSchur v0.5.6 [d7ba0133] Git v1.5.0 [42e2da0e] Grisu v1.0.2 [cd3eb016] HTTP v1.10.19 [b5f81e59] IOCapture v1.0.0 [615f187c] IfElse v0.1.1 [3587e190] InverseFunctions v0.1.17 [92d709cd] IrrationalConstants v0.2.6 [82899510] IteratorInterfaceExtensions v1.0.0 [1019f520] JLFzf v0.1.11 [692b3bcd] JLLWrappers v1.7.1 [682c06a0] JSON v1.4.0 [ae98c720] Jieko v0.2.1 [ba0b0d4f] Krylov v0.10.5 [b964fa9f] LaTeXStrings v1.4.0 [23fbe1c1] Latexify v0.16.10 [10f19ff3] LayoutPointers v0.1.17 [0e77f7df] LazilyInitializedFields v1.3.0 [1d6d02ad] LeftChildRightSiblingTrees v0.2.1 [87fe0de2] LineSearch v0.1.6 ⌃ [d3d80556] LineSearches v7.5.1 [7ed4a6bd] LinearSolve v3.57.0 [2ab3a3ac] LogExpFunctions v0.3.29 [e6f89c97] LoggingExtras v1.2.0 [1914dd2f] MacroTools v0.5.16 [d125e4d3] ManualMemory v0.1.8 [d0879d2d] MarkdownAST v0.1.2 [bb5d69b7] MaybeInplace v0.1.4 [739be429] MbedTLS v1.1.9 [442fdcdd] Measures v0.3.3 [e1d29d7a] Missings v1.2.0 [2e0e35c7] Moshi v0.3.7 [46d2c3a1] MuladdMacro v0.2.4 ⌅ [d41bc354] NLSolversBase v7.10.0 [2774e3e8] NLsolve v4.5.1 [77ba4419] NaNMath v1.1.3 ⌃ [8913a72c] NonlinearSolve v4.12.0 [be0214bd] NonlinearSolveBase v2.11.1 [5959db7a] NonlinearSolveFirstOrder v1.11.1 [9a2c21bd] NonlinearSolveQuasiNewton v1.12.0 [26075421] NonlinearSolveSpectralMethods v1.6.0 [4d8831e6] OpenSSL v1.6.1 [bac558e1] OrderedCollections v1.8.1 [1dea7af3] OrdinaryDiffEq v6.106.0 [89bda076] OrdinaryDiffEqAdamsBashforthMoulton v1.9.0 [6ad6398a] OrdinaryDiffEqBDF v1.14.0 ⌃ [bbf590c4] OrdinaryDiffEqCore v3.1.0 [50262376] OrdinaryDiffEqDefault v1.12.0 [4302a76b] OrdinaryDiffEqDifferentiation v1.22.0 [9286f039] OrdinaryDiffEqExplicitRK v1.8.0 [e0540318] OrdinaryDiffEqExponentialRK v1.12.0 [becaefa8] OrdinaryDiffEqExtrapolation v1.13.0 [5960d6e9] OrdinaryDiffEqFIRK v1.20.0 [101fe9f7] OrdinaryDiffEqFeagin v1.8.0 [d3585ca7] OrdinaryDiffEqFunctionMap v1.9.0 [d28bc4f8] OrdinaryDiffEqHighOrderRK v1.9.0 [9f002381] OrdinaryDiffEqIMEXMultistep v1.11.0 [521117fe] OrdinaryDiffEqLinear v1.10.0 [1344f307] OrdinaryDiffEqLowOrderRK v1.10.0 [b0944070] OrdinaryDiffEqLowStorageRK v1.11.0 [127b3ac7] OrdinaryDiffEqNonlinearSolve v1.19.0 [c9986a66] OrdinaryDiffEqNordsieck v1.8.0 [5dd0a6cf] OrdinaryDiffEqPDIRK v1.10.0 [5b33eab2] OrdinaryDiffEqPRK v1.8.0 [04162be5] OrdinaryDiffEqQPRK v1.8.0 [af6ede74] OrdinaryDiffEqRKN v1.9.0 [43230ef6] OrdinaryDiffEqRosenbrock v1.22.0 [2d112036] OrdinaryDiffEqSDIRK v1.11.0 [669c94d9] OrdinaryDiffEqSSPRK v1.11.0 [e3e12d00] OrdinaryDiffEqStabilizedIRK v1.10.0 [358294b1] OrdinaryDiffEqStabilizedRK v1.8.0 [fa646aed] OrdinaryDiffEqSymplecticRK v1.11.0 [b1df2697] OrdinaryDiffEqTsit5 v1.9.0 [79d7bb75] OrdinaryDiffEqVerner v1.10.0 [d96e819e] Parameters v0.12.3 [69de0a69] Parsers v2.8.3 [ccf2f8ad] PlotThemes v3.3.0 [995b91a9] PlotUtils v1.4.4 [91a5bcdd] Plots v1.41.4 [f517fe37] Polyester v0.7.18 [1d0040c9] PolyesterWeave v0.2.2 [d236fae5] PreallocationTools v1.1.0 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.1 [33c8b6b6] ProgressLogging v0.1.6 [92933f4c] ProgressMeter v1.11.0 [43287f4e] PtrArrays v1.3.0 [3cdcf5f2] RecipesBase v1.3.4 [01d81517] RecipesPipeline v0.6.12 [731186ca] RecursiveArrayTools v3.46.0 [189a3867] Reexport v1.2.2 [2792f1a3] RegistryInstances v0.1.0 [05181044] RelocatableFolders v1.0.1 [ae029012] Requires v1.3.1 [7e49a35a] RuntimeGeneratedFunctions v0.5.16 [94e857df] SIMDTypes v0.1.0 [0bca4576] SciMLBase v2.135.0 [19f34311] SciMLJacobianOperators v0.1.12 [a6db7da4] SciMLLogging v1.8.0 [c0aeaf25] SciMLOperators v1.14.1 [431bcebd] SciMLPublic v1.0.1 [53ae85a6] SciMLStructures v1.10.0 [6c6a2e73] Scratch v1.3.0 [efcf1570] Setfield v1.1.2 [992d4aef] Showoff v1.0.3 [777ac1f9] SimpleBufferStream v1.2.0 [727e6d20] SimpleNonlinearSolve v2.10.0 [a2af1166] SortingAlgorithms v1.2.2 [0a514795] SparseMatrixColorings v0.4.23 [276daf66] SpecialFunctions v2.6.1 [860ef19b] StableRNGs v1.0.4 [aedffcd0] Static v1.3.1 [0d7ed370] StaticArrayInterface v1.8.0 [90137ffa] StaticArrays v1.9.16 [1e83bf80] StaticArraysCore v1.4.4 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.8.0 [2913bbd2] StatsBase v0.34.10 [7792a7ef] StrideArraysCore v0.5.8 [ec057cc2] StructUtils v2.6.2 ⌅ [c3572dad] Sundials v4.28.0 [2efcf032] SymbolicIndexingInterface v0.3.46 [62fd8b95] TensorCore v0.1.1 [5d786b92] TerminalLoggers v0.1.7 [8290d209] ThreadingUtilities v0.5.5 [a759f4b9] TimerOutputs v0.5.29 [3bb67fe8] TranscodingStreams v0.11.3 [781d530d] TruncatedStacktraces v1.4.0 [5c2747f8] URIs v1.6.1 [3a884ed6] UnPack v1.0.2 [1cfade01] UnicodeFun 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Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... Running test_zeroLL ============== Starting Solver ... Time | Bug | Oxygen | min,max( Bug) | min,max( Oxygen) | Lf [μm] 0.000 | 10 | 10 | 0.08, 0.08 | 0, 0 | 10 0.100 | 23.3 | 59.5 | 0.08, 0.08 | 59.2, 59.5 | 63.4 0.200 | 60 | 64.6 | 0.08, 0.08 | 58.4, 64.5 | 305 0.300 | 159 | 34.6 | 0.08, 0.08 | 4.72, 34.1 | 672 0.400 | 254 | 2.99 | 0.08, 0.08 | 0.246, 2.91 | 459 0.500 | 257 | 2.93 | 0.08, 0.08 | 0.543, 2.87 | 355 0.600 | 257 | 2.92 | 0.08, 0.08 | 0.683, 2.87 | 324 0.700 | 257 | 2.93 | 0.08, 0.08 | 0.736, 2.87 | 314 0.800 | 257 | 2.93 | 0.08, 0.08 | 0.757, 2.87 | 310 0.900 | 257 | 2.93 | 0.08, 0.08 | 0.76, 2.88 | 310 Time | Bug | Oxygen | min,max( Bug) | min,max( Oxygen) | Lf [μm] 1.000 | 257 | 2.93 | 0.08, 0.08 | 0.762, 2.88 | 309 Checking result Running test_S_top ============== Starting Solver ... Time | Bug | Oxygen | min,max( Bug) | min,max( Oxygen) | Lf [μm] 0.000 | 10 | 10 | 0.08, 0.08 | 0, 0 | 10 0.100 | 23.3 | 59.4 | 0.08, 0.08 | 57.9, 58.1 | 62 0.200 | 59.9 | 63.4 | 0.08, 0.08 | 53.8, 55.5 | 302 0.300 | 158 | 33.7 | 0.08, 0.08 | 3.27, 26.3 | 653 0.400 | 253 | 3.02 | 0.08, 0.08 | 0.184, 1.88 | 426 0.500 | 256 | 2.96 | 0.08, 0.08 | 0.43, 1.89 | 315 0.600 | 257 | 2.95 | 0.08, 0.08 | 0.562, 1.9 | 281 0.700 | 257 | 2.95 | 0.08, 0.08 | 0.618, 1.91 | 268 0.800 | 257 | 2.95 | 0.08, 0.08 | 0.646, 1.92 | 262 0.900 | 257 | 2.95 | 0.08, 0.08 | 0.659, 1.92 | 260 Time | Bug | Oxygen | min,max( Bug) | min,max( Oxygen) | Lf [μm] 1.000 | 257 | 2.95 | 0.08, 0.08 | 0.667, 1.92 | 258 Checking result Running test_Diffusion ============== Starting Solver ... Time | Bug | Oxygen | min,max( Bug) | min,max( Oxygen) | Lf [μm] 0.000 | 10 | 25 | 0.08, 0.08 | 0, 0 | 50 1.000 | 43.9 | 12.2 | 0.08, 0.08 | 1.53, 10.6 | 173 Starting Solver ... Time | Bug | Oxygen | min,max( Bug) | min,max( Oxygen) | Lf [μm] 0.000 | 10 | 25 | 0.08, 0.08 | 0, 0 | 50 1.000 | 43.9 | 12.2 | 0.08, 0.08 | 1.51, 11.5 | 174 Starting Solver ... Time | Bug | Oxygen | min,max( Bug) | min,max( Oxygen) | Lf [μm] 0.000 | 10 | 25 | 0.08, 0.08 | 0, 0 | 50 1.000 | 43.9 | 12.2 | 0.08, 0.08 | 1.5, 11.9 | 174 Starting Solver ... Time | Bug | Oxygen | min,max( Bug) | min,max( Oxygen) | Lf [μm] 0.000 | 10 | 25 | 0.08, 0.08 | 0, 0 | 50 1.000 | 43.9 | 12.2 | 0.08, 0.08 | 1.5, 12 | 174 Starting Solver ... Time | Bug | Oxygen | min,max( Bug) | min,max( Oxygen) | Lf [μm] 0.000 | 10 | 25 | 0.08, 0.08 | 0, 0 | 50 1.000 | 43.9 | 12.2 | 0.08, 0.08 | 1.5, 12.1 | 174 Nz = 10, Error = 9.621e-02 Nz = 25, Error = 1.756e-02 Nz = 50, Error = 4.571e-03 Nz = 75, Error = 2.058e-03 Nz = 100, Error = 1.165e-03 Order = 1.918 Checking result Running test_SteadyState ============== Starting Solver ... Time | Bug | Oxygen | min,max( Bug) | min,max( Oxygen) | Lf [μm] 0.000 | 10 | 25 | 0.08, 0.08 | 0, 0 | 5 1.000 | 46.1 | 6.49 | 0.08, 0.08 | 6.49, 6.49 | 2.75e+03 2.000 | 46.8 | 6.47 | 0.08, 0.08 | 6.47, 6.47 | 2.72e+03 3.000 | 46.8 | 6.47 | 0.08, 0.08 | 6.47, 6.47 | 2.72e+03 4.000 | 46.8 | 6.47 | 0.08, 0.08 | 6.47, 6.47 | 2.72e+03 5.000 | 46.8 | 6.47 | 0.08, 0.08 | 6.47, 6.47 | 2.72e+03 6.000 | 46.8 | 6.47 | 0.08, 0.08 | 6.47, 6.47 | 2.72e+03 7.000 | 46.8 | 6.47 | 0.08, 0.08 | 6.47, 6.47 | 2.72e+03 8.000 | 46.8 | 6.47 | 0.08, 0.08 | 6.47, 6.47 | 2.72e+03 9.000 | 46.8 | 6.47 | 0.08, 0.08 | 6.47, 6.47 | 2.72e+03 Time | Bug | Oxygen | min,max( Bug) | min,max( Oxygen) | Lf [μm] 10.000 | 46.8 | 6.47 | 0.08, 0.08 | 6.47, 6.47 | 2.72e+03 % difference = 0.004475120995842444 Checking result Running test_TimeIntegration ============== Starting Solver ... Time | Bug | Oxygen | min,max( Bug) | min,max( Oxygen) | Lf [μm] 0.000 | 10 | 25 | 0.08, 0.08 | 0, 0 | 50 1.000 | 0.0228 | 100 | 0.08, 0.08 | 1.46e-85, 0.0717 | 25 Maximum relative error = 1.8393728836940682e-7 Checking result Running test_commandLineArgs ============== Unit Tests: Error During Test at /home/pkgeval/.julia/packages/Biofilm/uK5mS/test/runtests.jl:11 Got exception outside of a @test LoadError: Parameter file should contain a NamedTuple with name `p` Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] process_command_line_args(ARGS::Vector{String}) @ Biofilm ~/.julia/packages/Biofilm/uK5mS/src/parameters.jl:272 [3] julia_main() @ Biofilm ~/.julia/packages/Biofilm/uK5mS/src/Biofilm.jl:19 [4] top-level scope @ ~/.julia/packages/Biofilm/uK5mS/test/test_commandLineArgs.jl:4 [5] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:307 [6] top-level scope @ ~/.julia/packages/Biofilm/uK5mS/test/runtests.jl:16 [7] macro expansion @ /opt/julia/share/julia/stdlib/v1.12/Test/src/Test.jl:1776 [inlined] [8] macro expansion @ ~/.julia/packages/Biofilm/uK5mS/test/runtests.jl:42 [inlined] [9] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:307 [10] top-level scope @ none:6 [11] eval(m::Module, e::Any) @ Core ./boot.jl:489 [12] exec_options(opts::Base.JLOptions) @ Base ./client.jl:283 [13] _start() @ Base ./client.jl:550 in expression starting at /home/pkgeval/.julia/packages/Biofilm/uK5mS/test/test_commandLineArgs.jl:4 Test Summary: | Pass Error Total Time Unit Tests | 5 1 6 2m25.1s RNG of the outermost testset: Random.Xoshiro(0x1569fd18037ba42f, 0x801f25a08f780146, 0xaad33b4204d38845, 0xd59ca25c346f1a0c, 0xc33006c9390f07ae) ERROR: LoadError: Some tests did not pass: 5 passed, 0 failed, 1 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/Biofilm/uK5mS/test/runtests.jl:11 Testing failed after 219.32s ERROR: LoadError: Package Biofilm errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2535 [3] test @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2384 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:538 [5] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:169 [6] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:157 [7] test @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:157 [inlined] [8] #test#81 @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:156 [inlined] [9] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:223 [10] include(mod::Module, _path::String) @ Base ./Base.jl:306 [11] exec_options(opts::Base.JLOptions) @ Base ./client.jl:317 [12] _start() @ Base ./client.jl:550 in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 PkgEval failed after 2521.07s: package tests unexpectedly errored