Package evaluation of SOCRATESSingleColumnForcings on Julia 1.12.0-rc2.1 (084dab1917*) started at 2025-09-12T11:02:28.073


################################################################################
# Set-up
#

Installing PkgEval dependencies (TestEnv)...

Set-up completed after 7.58s


################################################################################
# Installation
#

Installing SOCRATESSingleColumnForcings...
   Resolving package versions...
    Updating `~/.julia/environments/v1.12/Project.toml`
  [efca6b66] + SOCRATESSingleColumnForcings v0.13.4
    Updating `~/.julia/environments/v1.12/Manifest.toml`
  [79e6a3ab] + Adapt v4.3.0
  [a9b6321e] + Atomix v1.1.2
⌅ [179af706] + CFTime v0.1.4
  [bbf7d656] + CommonSubexpressions v0.3.1
  [34da2185] + Compat v4.18.0
⌅ [864edb3b] + DataStructures v0.18.22
  [8bb1440f] + DelimitedFiles v1.9.1
  [39dd38d3] + Dierckx v0.5.4
  [163ba53b] + DiffResults v1.1.0
  [b552c78f] + DiffRules v1.15.1
  [ffbed154] + DocStringExtensions v0.9.5
⌅ [f6369f11] + ForwardDiff v0.10.38
  [92d709cd] + IrrationalConstants v0.2.4
  [692b3bcd] + JLLWrappers v1.7.1
  [63c18a36] + KernelAbstractions v0.9.38
  [2ab3a3ac] + LogExpFunctions v0.3.29
  [3da0fdf6] + MPIPreferences v0.1.11
  [1914dd2f] + MacroTools v0.5.16
⌅ [85f8d34a] + NCDatasets v0.11.9
  [77ba4419] + NaNMath v1.1.3
  [b7351bd1] + NonNegLeastSquares v0.4.1
  [bac558e1] + OrderedCollections v1.8.1
  [afe20452] + PCHIPInterpolation v0.2.1
  [aea7be01] + PrecompileTools v1.3.3
  [21216c6a] + Preferences v1.5.0
  [ae029012] + Requires v1.3.1
⌅ [7181ea78] + RootSolvers v0.4.6
  [efca6b66] + SOCRATESSingleColumnForcings v0.13.4
  [276daf66] + SpecialFunctions v2.5.1
  [90137ffa] + StaticArrays v1.9.15
  [1e83bf80] + StaticArraysCore v1.4.3
  [10745b16] + Statistics v1.11.1
⌅ [b60c26fb] + Thermodynamics v0.11.7
  [013be700] + UnsafeAtomics v0.3.0
  [0b7ba130] + Blosc_jll v1.21.7+0
  [6e34b625] + Bzip2_jll v1.0.9+0
  [cd4c43a9] + Dierckx_jll v0.2.0+0
⌅ [0234f1f7] + HDF5_jll v1.14.3+3
  [e33a78d0] + Hwloc_jll v2.12.2+0
  [94ce4f54] + Libiconv_jll v1.18.0+0
  [5ced341a] + Lz4_jll v1.10.1+0
  [7cb0a576] + MPICH_jll v4.3.1+0
  [f1f71cc9] + MPItrampoline_jll v5.5.4+0
  [9237b28f] + MicrosoftMPI_jll v10.1.4+3
⌅ [7243133f] + NetCDF_jll v400.902.211+1
⌅ [fe0851c0] + OpenMPI_jll v4.1.8+1
  [efe28fd5] + OpenSpecFun_jll v0.5.6+0
⌅ [02c8fc9c] + XML2_jll v2.13.8+0
  [ffd25f8a] + XZ_jll v5.8.1+0
  [a65dc6b1] + Xorg_libpciaccess_jll v0.18.1+0
  [3161d3a3] + Zstd_jll v1.5.7+1
  [477f73a3] + libaec_jll v1.1.4+0
  [337d8026] + libzip_jll v1.11.3+0
  [0dad84c5] + ArgTools v1.1.2
  [56f22d72] + Artifacts v1.11.0
  [2a0f44e3] + Base64 v1.11.0
  [ade2ca70] + Dates v1.11.0
  [f43a241f] + Downloads v1.6.0
  [7b1f6079] + FileWatching v1.11.0
  [b77e0a4c] + InteractiveUtils v1.11.0
  [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0
  [4af54fe1] + LazyArtifacts v1.11.0
  [b27032c2] + LibCURL v0.6.4
  [76f85450] + LibGit2 v1.11.0
  [8f399da3] + Libdl v1.11.0
  [37e2e46d] + LinearAlgebra v1.12.0
  [56ddb016] + Logging v1.11.0
  [d6f4376e] + Markdown v1.11.0
  [a63ad114] + Mmap v1.11.0
  [ca575930] + NetworkOptions v1.3.0
  [44cfe95a] + Pkg v1.12.0
  [de0858da] + Printf v1.11.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v0.7.0
  [9e88b42a] + Serialization v1.11.0
  [2f01184e] + SparseArrays v1.12.0
  [f489334b] + StyledStrings v1.11.0
  [fa267f1f] + TOML v1.0.3
  [a4e569a6] + Tar v1.10.0
  [cf7118a7] + UUIDs v1.11.0
  [4ec0a83e] + Unicode v1.11.0
  [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1
  [deac9b47] + LibCURL_jll v8.11.1+1
  [e37daf67] + LibGit2_jll v1.9.0+0
  [29816b5a] + LibSSH2_jll v1.11.3+1
  [14a3606d] + MozillaCACerts_jll v2025.5.20
  [4536629a] + OpenBLAS_jll v0.3.29+0
  [05823500] + OpenLibm_jll v0.8.7+0
  [458c3c95] + OpenSSL_jll v3.5.1+0
  [bea87d4a] + SuiteSparse_jll v7.8.3+2
  [83775a58] + Zlib_jll v1.3.1+2
  [8e850b90] + libblastrampoline_jll v5.13.1+1
  [8e850ede] + nghttp2_jll v1.64.0+1
  [3f19e933] + p7zip_jll v17.5.0+2
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`

Installation completed after 9.74s


################################################################################
# Precompilation
#

Precompiling PkgEval dependencies...

┌ Warning: Could not use exact versions of packages in manifest, re-resolving
└ @ TestEnv ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/activate_set.jl:76
Precompiling package dependencies...

Precompilation completed after 74.05s


################################################################################
# Testing
#

     Testing SOCRATESSingleColumnForcings
        Test Could not use exact versions of packages in manifest. Re-resolving dependencies
    Updating `/tmp/jl_i53jr0/Project.toml`
⌅ [6eacf6c3] + CLIMAParameters v0.7.26
⌅ [b60c26fb] ↓ Thermodynamics v0.11.7 ⇒ v0.11.2
  [8dfed614] ~ Test ⇒ v1.11.0
    Updating `/tmp/jl_i53jr0/Manifest.toml`
⌅ [6eacf6c3] + CLIMAParameters v0.7.26
⌅ [b60c26fb] ↓ Thermodynamics v0.11.7 ⇒ v0.11.2
  [8dfed614] ~ Test ⇒ v1.11.0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`
        Test Successfully re-resolved
      Status `/tmp/jl_i53jr0/Project.toml`
⌅ [6eacf6c3] CLIMAParameters v0.7.26
  [efca6b66] SOCRATESSingleColumnForcings v0.13.4
⌅ [b60c26fb] Thermodynamics v0.11.2
  [8dfed614] Test v1.11.0
      Status `/tmp/jl_i53jr0/Manifest.toml`
  [79e6a3ab] Adapt v4.3.0
  [a9b6321e] Atomix v1.1.2
⌅ [179af706] CFTime v0.1.4
⌅ [6eacf6c3] CLIMAParameters v0.7.26
  [bbf7d656] CommonSubexpressions v0.3.1
  [34da2185] Compat v4.18.0
⌅ [864edb3b] DataStructures v0.18.22
  [8bb1440f] DelimitedFiles v1.9.1
  [39dd38d3] Dierckx v0.5.4
  [163ba53b] DiffResults v1.1.0
  [b552c78f] DiffRules v1.15.1
  [ffbed154] DocStringExtensions v0.9.5
⌅ [f6369f11] ForwardDiff v0.10.38
  [92d709cd] IrrationalConstants v0.2.4
  [692b3bcd] JLLWrappers v1.7.1
  [63c18a36] KernelAbstractions v0.9.38
  [2ab3a3ac] LogExpFunctions v0.3.29
  [3da0fdf6] MPIPreferences v0.1.11
  [1914dd2f] MacroTools v0.5.16
⌅ [85f8d34a] NCDatasets v0.11.9
  [77ba4419] NaNMath v1.1.3
  [b7351bd1] NonNegLeastSquares v0.4.1
  [bac558e1] OrderedCollections v1.8.1
  [afe20452] PCHIPInterpolation v0.2.1
  [aea7be01] PrecompileTools v1.3.3
  [21216c6a] Preferences v1.5.0
  [ae029012] Requires v1.3.1
⌅ [7181ea78] RootSolvers v0.4.6
  [efca6b66] SOCRATESSingleColumnForcings v0.13.4
  [276daf66] SpecialFunctions v2.5.1
  [90137ffa] StaticArrays v1.9.15
  [1e83bf80] StaticArraysCore v1.4.3
  [10745b16] Statistics v1.11.1
⌅ [b60c26fb] Thermodynamics v0.11.2
  [013be700] UnsafeAtomics v0.3.0
  [0b7ba130] Blosc_jll v1.21.7+0
  [6e34b625] Bzip2_jll v1.0.9+0
  [cd4c43a9] Dierckx_jll v0.2.0+0
⌅ [0234f1f7] HDF5_jll v1.14.3+3
  [e33a78d0] Hwloc_jll v2.12.2+0
  [94ce4f54] Libiconv_jll v1.18.0+0
  [5ced341a] Lz4_jll v1.10.1+0
  [7cb0a576] MPICH_jll v4.3.1+0
  [f1f71cc9] MPItrampoline_jll v5.5.4+0
  [9237b28f] MicrosoftMPI_jll v10.1.4+3
⌅ [7243133f] NetCDF_jll v400.902.211+1
⌅ [fe0851c0] OpenMPI_jll v4.1.8+1
  [efe28fd5] OpenSpecFun_jll v0.5.6+0
⌅ [02c8fc9c] XML2_jll v2.13.8+0
  [ffd25f8a] XZ_jll v5.8.1+0
  [a65dc6b1] Xorg_libpciaccess_jll v0.18.1+0
  [3161d3a3] Zstd_jll v1.5.7+1
  [477f73a3] libaec_jll v1.1.4+0
  [337d8026] libzip_jll v1.11.3+0
  [0dad84c5] ArgTools v1.1.2
  [56f22d72] Artifacts v1.11.0
  [2a0f44e3] Base64 v1.11.0
  [ade2ca70] Dates v1.11.0
  [f43a241f] Downloads v1.6.0
  [7b1f6079] FileWatching v1.11.0
  [b77e0a4c] InteractiveUtils v1.11.0
  [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0
  [4af54fe1] LazyArtifacts v1.11.0
  [b27032c2] LibCURL v0.6.4
  [76f85450] LibGit2 v1.11.0
  [8f399da3] Libdl v1.11.0
  [37e2e46d] LinearAlgebra v1.12.0
  [56ddb016] Logging v1.11.0
  [d6f4376e] Markdown v1.11.0
  [a63ad114] Mmap v1.11.0
  [ca575930] NetworkOptions v1.3.0
  [44cfe95a] Pkg v1.12.0
  [de0858da] Printf v1.11.0
  [9a3f8284] Random v1.11.0
  [ea8e919c] SHA v0.7.0
  [9e88b42a] Serialization v1.11.0
  [2f01184e] SparseArrays v1.12.0
  [f489334b] StyledStrings v1.11.0
  [fa267f1f] TOML v1.0.3
  [a4e569a6] Tar v1.10.0
  [8dfed614] Test v1.11.0
  [cf7118a7] UUIDs v1.11.0
  [4ec0a83e] Unicode v1.11.0
  [e66e0078] CompilerSupportLibraries_jll v1.3.0+1
  [deac9b47] LibCURL_jll v8.11.1+1
  [e37daf67] LibGit2_jll v1.9.0+0
  [29816b5a] LibSSH2_jll v1.11.3+1
  [14a3606d] MozillaCACerts_jll v2025.5.20
  [4536629a] OpenBLAS_jll v0.3.29+0
  [05823500] OpenLibm_jll v0.8.7+0
  [458c3c95] OpenSSL_jll v3.5.1+0
  [bea87d4a] SuiteSparse_jll v7.8.3+2
  [83775a58] Zlib_jll v1.3.1+2
  [8e850b90] libblastrampoline_jll v5.13.1+1
  [8e850ede] nghttp2_jll v1.64.0+1
  [3f19e933] p7zip_jll v17.5.0+2
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading.
     Testing Running tests...
┌ Warning: If you're on HPC, you should set `export OPENBLAS_NUM_THREADS=1` in your environment, or use `LinearAlgebra.BLAS.set_num_threads(1)` in your code to avoid performance issues.
└ @ Main ~/.julia/packages/SOCRATESSingleColumnForcings/1CAlM/test/runtests.jl:8
[ Info: SOCRATESSingleColumnForcings version: 0.13.4
[ Info: CLIMAParameters version: 0.7.26
[ Info: Thermodynamics version: 0.11.2
[ Info: Testing combination 1/2304: flight_number=1, forcing_type=obs_data, initial_condition=false, surface=nothing, use_LES_output_for_z=false, return_old_z=false, conservative_interp=false, enforce_positivity=false
┌ Warning: Base.download is deprecated; use Downloads.download instead
│   caller = download_atlas_les_outputs(; cases::Vector{Int64}, forcing_type::Symbol) at download_atlas_les_profiles.jl:113
└ @ Core ~/.julia/packages/SOCRATESSingleColumnForcings/1CAlM/Data/Atlas_LES_Profiles/download_atlas_les_profiles.jl:113
┌ Warning: Did not find https://atmos.uw.edu/~ratlas/RF01_output/obs/SOCRATES_128x128_100m_10s_rad10_vg_M2005_aj.nc
└ @ SOCRATESSingleColumnForcings ~/.julia/packages/SOCRATESSingleColumnForcings/1CAlM/Data/Atlas_LES_Profiles/download_atlas_les_profiles.jl:116
SOCRATESSingleColumnForcings: Error During Test at /home/pkgeval/.julia/packages/SOCRATESSingleColumnForcings/1CAlM/test/runtests.jl:10
  Got exception outside of a @test
  MethodError: no method matching getindex(::Nothing, ::String)
  The function `getindex` exists, but no method is defined for this combination of argument types.
  Stacktrace:
   [1] process_case(flight_number::Int64; forcing_type::Symbol, new_z::Nothing, initial_condition::Bool, thermo_params::Thermodynamics.Parameters.ThermodynamicsParameters{Float64}, surface::Nothing, use_LES_output_for_z::Bool, return_old_z::Bool, fail_on_missing_data::Bool, conservative_interp::Bool, conservative_interp_kwargs::@NamedTuple{preserve_monotonicity::Bool, enforce_positivity::Bool, nnls_alg::Symbol, nnls_tol::Float64, enforce_conservation::Bool, integrate_method::Symbol})
     @ SOCRATESSingleColumnForcings ~/.julia/packages/SOCRATESSingleColumnForcings/1CAlM/src/process_case.jl:317
   [2] macro expansion
     @ ~/.julia/packages/SOCRATESSingleColumnForcings/1CAlM/test/runtests.jl:91 [inlined]
   [3] macro expansion
     @ /opt/julia/share/julia/stdlib/v1.12/Test/src/Test.jl:1776 [inlined]
   [4] top-level scope
     @ ~/.julia/packages/SOCRATESSingleColumnForcings/1CAlM/test/runtests.jl:11
   [5] include(mapexpr::Function, mod::Module, _path::String)
     @ Base ./Base.jl:306
   [6] top-level scope
     @ none:6
   [7] eval(m::Module, e::Any)
     @ Core ./boot.jl:489
   [8] exec_options(opts::Base.JLOptions)
     @ Base ./client.jl:287
   [9] _start()
     @ Base ./client.jl:554
Test Summary:                | Error  Total     Time
SOCRATESSingleColumnForcings |     1      1  1m14.0s
RNG of the outermost testset: Random.Xoshiro(0x08179fb859de94d8, 0xa900edd342547398, 0x4224f708e8f95f23, 0xcd9a3a5a2365ab30, 0xed0ad4d5a582799f)
ERROR: LoadError: Some tests did not pass: 0 passed, 0 failed, 1 errored, 0 broken.
in expression starting at /home/pkgeval/.julia/packages/SOCRATESSingleColumnForcings/1CAlM/test/runtests.jl:10

Testing failed after 111.51s

ERROR: LoadError: Package SOCRATESSingleColumnForcings errored during testing
Stacktrace:
  [1] pkgerror(msg::String)
    @ Pkg.Types /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Types.jl:68
  [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool)
    @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2427
  [3] test
    @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2280 [inlined]
  [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:483
  [5] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:164
  [6] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:152
  [7] test
    @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:152 [inlined]
  [8] #test#81
    @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:151 [inlined]
  [9] top-level scope
    @ /PkgEval.jl/scripts/evaluate.jl:219
 [10] include(mod::Module, _path::String)
    @ Base ./Base.jl:305
 [11] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:321
 [12] _start()
    @ Base ./client.jl:554
in expression starting at /PkgEval.jl/scripts/evaluate.jl:210

PkgEval failed after 292.09s: package tests unexpectedly errored