Package evaluation of LCOrbits on Julia 1.12.0-rc2.1 (084dab1917*) started at 2025-09-12T08:04:34.130 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 8.85s ################################################################################ # Installation # Installing LCOrbits... Resolving package versions... Updating `~/.julia/environments/v1.12/Project.toml` [d9401462] + LCOrbits v1.0.2 Updating `~/.julia/environments/v1.12/Manifest.toml` [ec485272] + ArnoldiMethod v0.4.0 [336ed68f] + CSV v0.10.15 [944b1d66] + CodecZlib v0.7.8 [34da2185] + Compat v4.18.0 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.8.0 [864edb3b] + DataStructures v0.19.1 [e2d170a0] + DataValueInterfaces v1.0.0 [48062228] + FilePathsBase v0.9.24 [86223c79] + Graphs v1.13.1 [d25df0c9] + Inflate v0.1.5 [842dd82b] + InlineStrings v1.4.5 [41ab1584] + InvertedIndices v1.3.1 [82899510] + IteratorInterfaceExtensions v1.0.0 [d9401462] + LCOrbits v1.0.2 [b964fa9f] + LaTeXStrings v1.4.0 [1914dd2f] + MacroTools v0.5.16 [e1d29d7a] + Missings v1.2.0 [bac558e1] + OrderedCollections v1.8.1 [69de0a69] + Parsers v2.8.3 [2dfb63ee] + PooledArrays v1.4.3 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.0 [08abe8d2] + PrettyTables v3.0.8 [189a3867] + Reexport v1.2.2 [91c51154] + SentinelArrays v1.4.8 [699a6c99] + SimpleTraits v0.9.5 [a2af1166] + SortingAlgorithms v1.2.2 [90137ffa] + StaticArrays v1.9.15 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [892a3eda] + StringManipulation v0.4.1 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [3bb67fe8] + TranscodingStreams v0.11.3 [ea10d353] + WeakRefStrings v1.4.2 [76eceee3] + WorkerUtilities v1.6.1 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [4536629a] + OpenBLAS_jll v0.3.29+0 [bea87d4a] + SuiteSparse_jll v7.8.3+2 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.13.1+1 Installation completed after 4.71s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... ERROR: LoadError: The following 1 direct dependency failed to precompile: QuantumClifford Failed to precompile QuantumClifford [0525e862-1e90-11e9-3e4d-1b39d7109de1] to "/home/pkgeval/.julia/compiled/v1.12/QuantumClifford/jl_JD9pX3". ERROR: LoadError: UndefVarError: `dlopen` not defined in `Base.Libc` Suggestion: check for spelling errors or missing imports. Hint: a global variable of this name also exists in Base.Libc.Libdl. - Also exported by Libdl (loaded but not imported in Main). Stacktrace: [1] getproperty(x::Module, f::Symbol) @ Base ./Base_compiler.jl:47 [2] top-level scope @ ~/.julia/packages/Nemo/EuCgH/src/Nemo.jl:109 [3] include(mod::Module, _path::String) @ Base ./Base.jl:305 [4] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:2997 [5] top-level scope @ stdin:5 [6] eval(m::Module, e::Any) @ Core ./boot.jl:489 [7] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2843 [8] include_string @ ./loading.jl:2853 [inlined] [9] exec_options(opts::Base.JLOptions) @ Base ./client.jl:319 [10] _start() @ Base ./client.jl:554 in expression starting at /home/pkgeval/.julia/packages/Nemo/EuCgH/src/Nemo.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile Nemo [2edaba10-b0f1-5616-af89-8c11ac63239a] to "/home/pkgeval/.julia/compiled/v1.12/Nemo/jl_o9MxpM". Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3284 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}})() @ Base ./loading.jl:2652 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:93 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:88 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:114 [7] #invokelatest_gr#232 @ ./reflection.jl:1282 [inlined] [8] invokelatest_gr @ ./reflection.jl:1274 [inlined] [9] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3855 [10] maybe_cachefile_lock @ ./loading.jl:3852 [inlined] [11] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2638 [12] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2465 [13] macro expansion @ ./loading.jl:2393 [inlined] [14] macro expansion @ ./lock.jl:376 [inlined] [15] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2358 [16] require(into::Module, mod::Symbol) @ Base ./loading.jl:2334 [17] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:306 [18] top-level scope @ ~/.julia/packages/QuantumClifford/3wgeQ/src/QuantumClifford.jl:1263 [19] include(mod::Module, _path::String) @ Base ./Base.jl:305 [20] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:2997 [21] top-level scope @ stdin:5 [22] eval(m::Module, e::Any) @ Core ./boot.jl:489 [23] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2843 [24] include_string @ ./loading.jl:2853 [inlined] [25] exec_options(opts::Base.JLOptions) @ Base ./client.jl:319 [26] _start() @ Base ./client.jl:554 in expression starting at /home/pkgeval/.julia/packages/QuantumClifford/3wgeQ/src/randoms.jl:3 in expression starting at /home/pkgeval/.julia/packages/QuantumClifford/3wgeQ/src/QuantumClifford.jl:1 in expression starting at stdin: in expression starting at /PkgEval.jl/scripts/precompile.jl:37 Precompilation failed after 99.95s ################################################################################ # Testing # Testing LCOrbits Status `/tmp/jl_RJGc2X/Project.toml` [4c88cf16] Aqua v0.8.14 [336ed68f] CSV v0.10.15 [a93c6f00] DataFrames v1.8.0 [ffbed154] DocStringExtensions v0.9.5 [e30172f5] Documenter v1.14.1 [c3a54625] JET v0.10.7 [d9401462] LCOrbits v1.0.2 ⌃ [0525e862] QuantumClifford v0.8.10 [860ef19b] StableRNGs v1.0.3 [f8b46487] TestItemRunner v1.1.0 [37e2e46d] LinearAlgebra v1.12.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_RJGc2X/Manifest.toml` [a4c015fc] ANSIColoredPrinters v0.0.1 ⌅ [c3fe647b] AbstractAlgebra v0.30.9 [1520ce14] AbstractTrees v0.4.5 [4c88cf16] Aqua v0.8.14 [ec485272] ArnoldiMethod v0.4.0 [62783981] BitTwiddlingConvenienceFunctions v0.1.6 [336ed68f] CSV v0.10.15 [da1fd8a2] CodeTracking v2.0.0 [944b1d66] CodecZlib v0.7.8 [861a8166] Combinatorics v1.0.3 [f70d9fcc] CommonWorldInvalidations v1.0.0 [34da2185] Compat v4.18.0 [807dbc54] Compiler v0.1.1 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.8.0 [864edb3b] DataStructures v0.19.1 [e2d170a0] DataValueInterfaces v1.0.0 [ffbed154] DocStringExtensions v0.9.5 [e30172f5] Documenter v1.14.1 [48062228] FilePathsBase v0.9.24 [d7ba0133] Git v1.5.0 [86223c79] Graphs v1.13.1 ⌅ [d5909c97] GroupsCore v0.4.2 [3e5b6fbb] HostCPUFeatures v0.1.17 ⌅ [2cd5bd5f] ILog2 v0.2.4 [b5f81e59] IOCapture v0.2.5 [615f187c] IfElse v0.1.1 [d25df0c9] Inflate v0.1.5 [842dd82b] InlineStrings v1.4.5 [41ab1584] InvertedIndices v1.3.1 [82899510] IteratorInterfaceExtensions v1.0.0 [c3a54625] JET v0.10.7 [692b3bcd] JLLWrappers v1.7.1 [682c06a0] JSON v0.21.4 [aa1ae85d] JuliaInterpreter v0.10.5 [70703baa] JuliaSyntax v1.0.2 [d9401462] LCOrbits v1.0.2 [b964fa9f] LaTeXStrings v1.4.0 [0e77f7df] LazilyInitializedFields v1.3.0 [6f1432cf] LoweredCodeUtils v3.4.3 [1914dd2f] MacroTools v0.5.16 [d0879d2d] MarkdownAST v0.1.2 [e1d29d7a] Missings v1.2.0 ⌅ [2edaba10] Nemo v0.34.7 [bac558e1] OrderedCollections v1.8.1 [69de0a69] Parsers v2.8.3 [2dfb63ee] PooledArrays v1.4.3 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.0 [08abe8d2] PrettyTables v3.0.8 ⌃ [0525e862] QuantumClifford v0.8.10 ⌅ [5717a53b] QuantumInterface v0.3.10 [fb686558] RandomExtensions v0.4.4 [189a3867] Reexport v1.2.2 [2792f1a3] RegistryInstances v0.1.0 [fdea26ae] SIMD v3.7.1 [91c51154] SentinelArrays v1.4.8 [699a6c99] SimpleTraits v0.9.5 [a2af1166] SortingAlgorithms v1.2.2 [860ef19b] StableRNGs v1.0.3 [aedffcd0] Static v1.2.0 [90137ffa] StaticArrays v1.9.15 [1e83bf80] StaticArraysCore v1.4.3 [10745b16] Statistics v1.11.1 [892a3eda] StringManipulation v0.4.1 [8e1ec7a9] SumTypes v0.5.8 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [f8b46487] TestItemRunner v1.1.0 [1c621080] TestItems v1.0.0 [3bb67fe8] TranscodingStreams v0.11.3 [ea10d353] WeakRefStrings v1.4.2 [76eceee3] WorkerUtilities v1.6.1 [e21ec000] Antic_jll v0.201.500+0 [d9960996] Arb_jll v200.2300.0+0 [fcfa6d1b] Calcium_jll v0.401.100+0 [2e619515] Expat_jll v2.7.1+0 ⌅ [e134572f] FLINT_jll v200.900.9+0 [020c3dae] Git_LFS_jll v3.7.0+0 [f8c6e375] Git_jll v2.51.1+0 [94ce4f54] Libiconv_jll v1.18.0+0 [656ef2d0] OpenBLAS32_jll v0.3.29+0 [9bd350c2] OpenSSH_jll v10.0.1+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.6.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.12.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [1a1011a3] SharedArrays v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.12.0 [f489334b] StyledStrings v1.11.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [781609d7] GMP_jll v6.3.0+2 [deac9b47] LibCURL_jll v8.11.1+1 [e37daf67] LibGit2_jll v1.9.0+0 [29816b5a] LibSSH2_jll v1.11.3+1 [3a97d323] MPFR_jll v4.2.2+0 [14a3606d] MozillaCACerts_jll v2025.5.20 [4536629a] OpenBLAS_jll v0.3.29+0 [458c3c95] OpenSSL_jll v3.5.1+0 [efcefdf7] PCRE2_jll v10.44.0+1 [bea87d4a] SuiteSparse_jll v7.8.3+2 [83775a58] Zlib_jll v1.3.1+2 [8e850b90] libblastrampoline_jll v5.13.1+1 [8e850ede] nghttp2_jll v1.64.0+1 [3f19e933] p7zip_jll v17.5.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... Starting tests with 1 threads out of `Sys.CPU_THREADS = 1`... Test Summary: | Pass Total Time Package | 11 11 1m57.0s Testing LCOrbits tests passed Testing completed after 182.65s PkgEval succeeded after 311.27s