Package evaluation of UnfoldSim on Julia 1.13.0-DEV.873 (be59b3b2f4*) started at 2025-07-23T10:16:53.523


################################################################################
# Set-up
#

Installing PkgEval dependencies (TestEnv)...

Set-up completed after 9.48s


################################################################################
# Installation
#

Installing UnfoldSim...
   Resolving package versions...
   Installed MixedModels ─ v4.37.0
    Updating `~/.julia/environments/v1.13/Project.toml`
  [ed8ae6d2] + UnfoldSim v0.4.1
    Updating `~/.julia/environments/v1.13/Manifest.toml`
  [47edcb42] + ADTypes v1.15.0
  [621f4979] + AbstractFFTs v1.5.0
  [79e6a3ab] + Adapt v4.3.0
  [66dad0bd] + AliasTables v1.1.3
  [4fba245c] + ArrayInterface v7.19.0
  [4c555306] + ArrayLayouts v1.11.2
  [69666777] + Arrow v2.8.0
  [31f734f8] + ArrowTypes v2.3.0
  [093aae92] + BSplineKit v0.19.0
  [aae01518] + BandedMatrices v1.9.4
  [0e736298] + Bessels v0.2.8
  [c3b6d118] + BitIntegers v0.3.5
  [fa961155] + CEnum v0.5.0
  [aafaddc9] + CatIndices v0.2.2
  [5ba52731] + CodecLz4 v0.4.6
  [6b39b394] + CodecZstd v0.8.6
  [3da002f7] + ColorTypes v0.12.1
  [c3611d14] + ColorVectorSpace v0.11.0
  [5ae59095] + Colors v0.13.1
  [bbf7d656] + CommonSubexpressions v0.3.1
  [f70d9fcc] + CommonWorldInvalidations v1.0.0
  [34da2185] + Compat v4.17.0
  [ed09eef8] + ComputationalResources v0.3.2
  [f0e56b4a] + ConcurrentUtilities v2.5.0
  [187b0558] + ConstructionBase v1.6.0
  [a8cc5b0e] + Crayons v4.1.1
  [dc8bdbbb] + CustomUnitRanges v1.0.2
  [717857b8] + DSP v0.8.4
  [9a962f9c] + DataAPI v1.16.0
  [a93c6f00] + DataFrames v1.7.0
  [864edb3b] + DataStructures v0.18.22
  [e2d170a0] + DataValueInterfaces v1.0.0
  [85a47980] + Dictionaries v0.4.5
  [163ba53b] + DiffResults v1.1.0
  [b552c78f] + DiffRules v1.15.1
  [a0c0ee7d] + DifferentiationInterface v0.7.3
  [31c24e10] + Distributions v0.25.120
  [ffbed154] + DocStringExtensions v0.9.5
  [4e289a0a] + EnumX v1.0.5
  [e2ba6199] + ExprTools v0.1.10
  [4f61f5a4] + FFTViews v0.3.2
  [7a1cc6ca] + FFTW v1.9.0
  [442a2c76] + FastGaussQuadrature v1.0.2
  [5789e2e9] + FileIO v1.17.0
  [1a297f60] + FillArrays v1.13.0
  [6a86dc24] + FiniteDiff v2.27.0
  [53c48c17] + FixedPointNumbers v0.8.5
  [f6369f11] + ForwardDiff v1.0.1
  [38e38edf] + GLM v1.9.0
  [f67ccb44] + HDF5 v0.17.2
  [34004b35] + HypergeometricFunctions v0.3.28
  [615f187c] + IfElse v0.1.1
  [c817782e] + ImageBase v0.1.7
  [a09fc81d] + ImageCore v0.10.5
  [6a3955dd] + ImageFiltering v0.7.10
  [313cdc1a] + Indexing v1.1.1
  [842dd82b] + InlineStrings v1.4.4
  [41ab1584] + InvertedIndices v1.3.1
  [92d709cd] + IrrationalConstants v0.2.4
  [c8e1da08] + IterTools v1.10.0
  [82899510] + IteratorInterfaceExtensions v1.0.0
  [692b3bcd] + JLLWrappers v1.7.1
  [0f8b85d8] + JSON3 v1.14.3
  [b964fa9f] + LaTeXStrings v1.4.0
  [d3d80556] + LineSearches v7.4.0
  [2ab3a3ac] + LogExpFunctions v0.3.29
  [3da0fdf6] + MPIPreferences v0.1.11
  [1914dd2f] + MacroTools v0.5.16
  [dbb5928d] + MappedArrays v0.4.2
  [36b8f3f0] + MetaArrays v0.2.10
  [e1d29d7a] + Missings v1.2.0
  [ff71e718] + MixedModels v4.37.0
  [7e9fb7ac] + MixedModelsDatasets v0.1.2
  [d5ae56c5] + MixedModelsSim v0.2.11
  [78c3b35d] + Mocking v0.8.1
  [e94cdb99] + MosaicViews v0.3.4
  [d41bc354] + NLSolversBase v7.10.0
  [76087f3c] + NLopt v1.2.0
  [77ba4419] + NaNMath v1.1.3
  [6fe1bfb0] + OffsetArrays v1.17.0
  [429524aa] + Optim v1.13.2
  [bac558e1] + OrderedCollections v1.8.1
  [90014a1f] + PDMats v0.11.35
  [5432bcbf] + PaddedViews v0.5.12
  [d96e819e] + Parameters v0.12.3
  [69de0a69] + Parsers v2.8.3
  [18e31ff7] + Peaks v0.5.3
  [f27b6e38] + Polynomials v4.1.0
  [2dfb63ee] + PooledArrays v1.4.3
  [85a6dd25] + PositiveFactorizations v0.2.4
  [aea7be01] + PrecompileTools v1.3.2
  [21216c6a] + Preferences v1.4.3
  [08abe8d2] + PrettyTables v2.4.0
  [92933f4c] + ProgressMeter v1.10.4
  [43287f4e] + PtrArrays v1.3.0
  [1fd47b50] + QuadGK v2.11.2
  [3cdcf5f2] + RecipesBase v1.3.4
  [189a3867] + Reexport v1.2.2
  [ae029012] + Requires v1.3.1
  [79098fc4] + Rmath v0.8.0
  [fdea26ae] + SIMD v3.7.1
  [6c6a2e73] + Scratch v1.3.0
  [91c51154] + SentinelArrays v1.4.8
  [efcf1570] + Setfield v1.1.2
  [1277b4bf] + ShiftedArrays v2.0.0
  [df1fea92] + SignalAnalysis v0.10.4
  [00c44e92] + SignalBase v0.1.2
  [a2af1166] + SortingAlgorithms v1.2.1
  [276daf66] + SpecialFunctions v2.5.1
  [03a91e81] + SplitApplyCombine v1.2.3
  [cae243ae] + StackViews v0.1.2
  [aedffcd0] + Static v1.2.0
  [0d7ed370] + StaticArrayInterface v1.8.0
  [90137ffa] + StaticArrays v1.9.14
  [1e83bf80] + StaticArraysCore v1.4.3
  [10745b16] + Statistics v1.11.1
  [82ae8749] + StatsAPI v1.7.1
  [2913bbd2] + StatsBase v0.34.5
  [4c63d2b9] + StatsFuns v1.5.0
  [3eaba693] + StatsModels v0.7.4
  [892a3eda] + StringManipulation v0.4.1
  [354b36f9] + StringViews v1.3.4
  [856f2bd8] + StructTypes v1.11.0
  [dc5dba14] + TZJData v1.5.0+2025b
  [3783bdb8] + TableTraits v1.0.1
  [bd369af6] + Tables v1.12.1
  [62fd8b95] + TensorCore v0.1.1
  [06e1c1a7] + TiledIteration v0.5.0
  [f269a46b] + TimeZones v1.22.0
  [c751599d] + ToeplitzMatrices v0.8.5
  [3bb67fe8] + TranscodingStreams v0.11.3
  [9d95f2ec] + TypedTables v1.4.6
  [3a884ed6] + UnPack v1.0.2
  [ed8ae6d2] + UnfoldSim v0.4.1
  [1986cc42] + Unitful v1.23.1
  [8149f6b0] + WAV v1.2.0
  [f5851436] + FFTW_jll v3.3.11+0
  [0234f1f7] + HDF5_jll v1.14.6+0
  [e33a78d0] + Hwloc_jll v2.12.1+0
  [1d5cc7b8] + IntelOpenMP_jll v2025.2.0+0
  [5ced341a] + Lz4_jll v1.10.1+0
  [856f044c] + MKL_jll v2025.2.0+0
  [7cb0a576] + MPICH_jll v4.3.1+0
  [f1f71cc9] + MPItrampoline_jll v5.5.4+0
  [9237b28f] + MicrosoftMPI_jll v10.1.4+3
  [079eb43e] + NLopt_jll v2.10.0+0
  [fe0851c0] + OpenMPI_jll v5.0.8+0
  [efe28fd5] + OpenSpecFun_jll v0.5.6+0
  [f50d1b31] + Rmath_jll v0.5.1+0
  [477f73a3] + libaec_jll v1.1.3+0
  [1317d2d5] + oneTBB_jll v2022.0.0+0
  [0dad84c5] + ArgTools v1.1.2
  [56f22d72] + Artifacts v1.11.0
  [2a0f44e3] + Base64 v1.11.0
  [ade2ca70] + Dates v1.11.0
  [8ba89e20] + Distributed v1.11.0
  [f43a241f] + Downloads v1.7.0
  [7b1f6079] + FileWatching v1.11.0
  [9fa8497b] + Future v1.11.0
  [b77e0a4c] + InteractiveUtils v1.11.0
  [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0
  [4af54fe1] + LazyArtifacts v1.11.0
  [b27032c2] + LibCURL v0.6.4
  [76f85450] + LibGit2 v1.11.0
  [8f399da3] + Libdl v1.11.0
  [37e2e46d] + LinearAlgebra v1.12.0
  [56ddb016] + Logging v1.11.0
  [d6f4376e] + Markdown v1.11.0
  [a63ad114] + Mmap v1.11.0
  [ca575930] + NetworkOptions v1.3.0
  [44cfe95a] + Pkg v1.13.0
  [de0858da] + Printf v1.11.0
  [3fa0cd96] + REPL v1.11.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v0.7.0
  [9e88b42a] + Serialization v1.11.0
  [6462fe0b] + Sockets v1.11.0
  [2f01184e] + SparseArrays v1.12.0
  [f489334b] + StyledStrings v1.11.0
  [4607b0f0] + SuiteSparse
  [fa267f1f] + TOML v1.0.3
  [a4e569a6] + Tar v1.10.0
  [8dfed614] + Test v1.11.0
  [cf7118a7] + UUIDs v1.11.0
  [4ec0a83e] + Unicode v1.11.0
  [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1
  [deac9b47] + LibCURL_jll v8.14.1+1
  [e37daf67] + LibGit2_jll v1.9.1+0
  [29816b5a] + LibSSH2_jll v1.11.3+1
  [14a3606d] + MozillaCACerts_jll v2025.7.15
  [4536629a] + OpenBLAS_jll v0.3.29+0
  [05823500] + OpenLibm_jll v0.8.5+0
  [458c3c95] + OpenSSL_jll v3.5.1+0
  [efcefdf7] + PCRE2_jll v10.45.0+0
  [bea87d4a] + SuiteSparse_jll v7.10.1+0
  [83775a58] + Zlib_jll v1.3.1+2
  [3161d3a3] + Zstd_jll v1.5.7+1
  [8e850b90] + libblastrampoline_jll v5.13.1+0
  [8e850ede] + nghttp2_jll v1.65.0+0
  [3f19e933] + p7zip_jll v17.5.0+2

Installation completed after 10.9s


################################################################################
# Precompilation
#

Precompiling PkgEval dependencies...

Precompiling package dependencies...

======================================================================================
Information request received. A stacktrace will print followed by a 1.0 second profile
======================================================================================

cmd: /opt/julia/bin/julia 41 running 0 of 1

signal (10): User defined signal 1
epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line)
uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404
uv_run at /workspace/srcdir/libuv/src/unix/core.c:430
ijl_task_get_next at /source/src/scheduler.c:457
wait at ./task.jl:1192
wait_forever at ./task.jl:1129
jfptr_wait_forever_58897.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:3807 [inlined]
ijl_apply_generic at /source/src/gf.c:4004
jl_apply at /source/src/julia.h:2345 [inlined]
start_task at /source/src/task.c:1249
unknown function (ip: (nil)) at (unknown file)

==============================================================
Profile collected. A report will print at the next yield point
==============================================================

┌ Warning: There were no samples collected in one or more groups.
│ This may be due to idle threads, or you may need to run your
│ program longer (perhaps by running it multiple times),
│ or adjust the delay between samples with `Profile.init()`.
└ @ Profile /opt/julia/share/julia/stdlib/v1.13/Profile/src/Profile.jl:1362
Overhead ╎ [+additional indent] Count File:Line  Function
=========================================================
Thread 1 (default) Task 0x00007788b46021d0 Total snapshots: 639. Utilization: 0%
   ╎639 @Base/task.jl:1129  wait_forever()
638╎ 639 @Base/task.jl:1192  wait()


======================================================================================
Information request received. A stacktrace will print followed by a 1.0 second profile
======================================================================================

cmd: /opt/julia/bin/julia 1 running 0 of 1

signal (10): User defined signal 1
epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line)
uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404
uv_run at /workspace/srcdir/libuv/src/unix/core.c:430
ijl_task_get_next at /source/src/scheduler.c:457
wait at ./task.jl:1192
wait_forever at ./task.jl:1129
jfptr_wait_forever_58897.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:3807 [inlined]
ijl_apply_generic at /source/src/gf.c:4004
jl_apply at /source/src/julia.h:2345 [inlined]
start_task at /source/src/task.c:1249
unknown function (ip: (nil)) at (unknown file)

==============================================================
Profile collected. A report will print at the next yield point
==============================================================

┌ Warning: There were no samples collected in one or more groups.
│ This may be due to idle threads, or you may need to run your
│ program longer (perhaps by running it multiple times),
│ or adjust the delay between samples with `Profile.init()`.
└ @ Profile /opt/julia/share/julia/stdlib/v1.13/Profile/src/Profile.jl:1362
Overhead ╎ [+additional indent] Count File:Line  Function
=========================================================
Thread 1 (default) Task 0x00007f5865837ee0 Total snapshots: 646. Utilization: 0%
   ╎646 @Base/task.jl:1129  wait_forever()
645╎ 646 @Base/task.jl:1192  wait()


Precompilation completed after 2688.73s


################################################################################
# Testing
#


[1] signal 15: Terminated
in expression starting at /PkgEval.jl/scripts/evaluate.jl:210
epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line)
uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404
uv_run at /workspace/srcdir/libuv/src/unix/core.c:430
ijl_task_get_next at /source/src/scheduler.c:457
wait at ./task.jl:1192
wait_forever at ./task.jl:1129
jfptr_wait_forever_58897.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:3807 [inlined]
ijl_apply_generic at /source/src/gf.c:4004
jl_apply at /source/src/julia.h:2345 [inlined]
start_task at /source/src/task.c:1249
unknown function (ip: (nil)) at (unknown file)
Allocations: 17399732 (Pool: 17399203; Big: 529); GC: 14

[1139] signal 15: Terminated
in expression starting at /home/pkgeval/.julia/packages/MPICH_jll/OnblB/.pkg/select_artifacts.jl:3
getindex at ./essentials.jl:982 [inlined]
iterate at ./../usr/share/julia/Compiler/src/typeinfer.jl:710 [inlined]
iterate at ./iterators.jl:197 [inlined]
store_backedges at ./../usr/share/julia/Compiler/src/typeinfer.jl:757
verify_method at ./staticdata.jl:273
verify_method at ./staticdata.jl:239
verify_method_graph at ./staticdata.jl:59
_insert_backedges at ./staticdata.jl:33
_insert_backedges at ./staticdata.jl:30 [inlined]
insert_backedges at ./staticdata.jl:23 [inlined]
#_include_from_serialized#876 at ./loading.jl:1291
_include_from_serialized at ./loading.jl:1247 [inlined]
#_require_search_from_serialized#892 at ./loading.jl:2089
_require_search_from_serialized at ./loading.jl:1983
jfptr__require_search_from_serialized_71129.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:3807 [inlined]
ijl_apply_generic at /source/src/gf.c:4004
__require_prelocked at ./loading.jl:2602
_require_prelocked at ./loading.jl:2468
macro expansion at ./loading.jl:2396 [inlined]
macro expansion at ./lock.jl:376 [inlined]
__require at ./loading.jl:2360
jfptr___require_38389.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:3807 [inlined]
ijl_apply_generic at /source/src/gf.c:4004
jl_apply at /source/src/julia.h:2345 [inlined]
jl_f_invoke_in_world at /source/src/builtins.c:896
require at ./loading.jl:2336 [inlined]
eval_import_path at ./module.jl:36 [inlined]
eval_import_path_all at ./module.jl:60
_eval_using at ./module.jl:137
jfptr__eval_using_66127.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:3807 [inlined]
ijl_apply_generic at /source/src/gf.c:4004
jl_apply at /source/src/julia.h:2345 [inlined]
do_call at /source/src/interpreter.c:123
eval_value at /source/src/interpreter.c:243
eval_stmt_value at /source/src/interpreter.c:194 [inlined]
eval_body at /source/src/interpreter.c:708
jl_interpret_toplevel_thunk at /source/src/interpreter.c:899
jl_toplevel_eval_flex at /source/src/toplevel.c:773
jl_toplevel_eval_flex at /source/src/toplevel.c:713
ijl_toplevel_eval at /source/src/toplevel.c:785
ijl_toplevel_eval_in at /source/src/toplevel.c:830
eval at ./boot.jl:489
include_string at ./loading.jl:2848
_jl_invoke at /source/src/gf.c:3807 [inlined]
ijl_apply_generic at /source/src/gf.c:4004
_include at ./loading.jl:2908
include at ./Base.jl:310
IncludeInto at ./Base.jl:311
jfptr_IncludeInto_59309.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:3807 [inlined]
ijl_apply_generic at /source/src/gf.c:4004
jl_apply at /source/src/julia.h:2345 [inlined]
do_call at /source/src/interpreter.c:123
eval_value at /source/src/interpreter.c:243
eval_stmt_value at /source/src/interpreter.c:194 [inlined]
eval_body at /source/src/interpreter.c:708
jl_interpret_toplevel_thunk at /source/src/interpreter.c:899
jl_toplevel_eval_flex at /source/src/toplevel.c:773
jl_toplevel_eval_flex at /source/src/toplevel.c:713
ijl_toplevel_eval at /source/src/toplevel.c:785
ijl_toplevel_eval_in at /source/src/toplevel.c:830
eval at ./boot.jl:489
exec_options at ./client.jl:286
_start at ./client.jl:553
jfptr__start_59511.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:3807 [inlined]
ijl_apply_generic at /source/src/gf.c:4004
jl_apply at /source/src/julia.h:2345 [inlined]
true_main at /source/src/jlapi.c:971
jl_repl_entrypoint at /source/src/jlapi.c:1138
main at /source/cli/loader_exe.c:58
unknown function (ip: 0x77e216cd3249) at /lib/x86_64-linux-gnu/libc.so.6
__libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line)
unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S
unknown function (ip: (nil)) at (unknown file)
Allocations: 1 (Pool: 1; Big: 0); GC: 0

PkgEval terminated after 2731.22s: test duration exceeded the time limit