Package evaluation to test PyHCTSA on Julia 1.14.0-DEV.3155 (07edee4e4c*) started at 2026-09-10T18:45:46.287 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 15.57s ################################################################################ # Installation # Installing PyHCTSA... Resolving package versions... Updating `~/.julia/environments/v1.14/Project.toml` [4f3a0022] + PyHCTSA v0.1.0 Updating `~/.julia/environments/v1.14/Manifest.toml` [992eb4ea] + CondaPkg v0.2.36 [187b0558] + ConstructionBase v1.6.0 [9a962f9c] + DataAPI v1.16.0 [e2d170a0] + DataValueInterfaces v1.0.0 [8bb1440f] + DelimitedFiles v1.9.1 [0703355e] + DimensionalData v0.30.2 [411431e0] + Extents v0.1.6 [85a1e053] + Interfaces v0.3.2 [8197267c] + IntervalSets v0.7.14 [41ab1584] + InvertedIndices v1.3.1 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.8.0 [682c06a0] + JSON v1.8.0 [1914dd2f] + MacroTools v0.5.16 [0b3b1443] + MicroMamba v0.1.15 [d6ea422f] + MoreMaps v0.3.0 [bac558e1] + OrderedCollections v2.0.1 [69de0a69] + Parsers v3.0.0 [fa939f87] + Pidfile v1.3.0 [aea7be01] + PrecompileTools v1.3.4 [21216c6a] + Preferences v1.5.2 [33c8b6b6] + ProgressLogging v0.1.6 [4f3a0022] + PyHCTSA v0.1.0 [6099a3de] + PythonCall v0.9.35 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [6c6a2e73] + Scratch v1.3.0 [10745b16] + Statistics v1.11.5 [ec057cc2] + StructUtils v2.8.5 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.14.0 [f3112013] + TimeseriesFeatures v0.7.0 [e17b2a0c] + UnsafePointers v1.0.0 [f8abcde7] + micromamba_jll v2.3.1+0 [4d7b5844] + pixi_jll v0.76.2+0 [0dad84c5] + ArgTools v1.2.0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.12.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v1.0.0 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.14.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.14.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.13.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [f489334b] + StyledStrings v1.13.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.5.7+0 [deac9b47] + LibCURL_jll v8.22.0+0 [e37daf67] + LibGit2_jll v1.9.7+0 [29816b5a] + LibSSH2_jll v1.11.104+0 [14a3606d] + MozillaCACerts_jll v2026.8.13 [4536629a] + OpenBLAS_jll v0.3.34+0 [458c3c95] + OpenSSL_jll v3.5.8+0 [efcefdf7] + PCRE2_jll v10.48.0+0 [83775a58] + Zlib_jll v1.3.2+0 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.70.0+0 [3f19e933] + p7zip_jll v17.8.2+0 Installation completed after 3.94s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... ┌ Warning: Could not use exact versions of packages in manifest, re-resolving └ @ TestEnv ~/.julia/packages/TestEnv/sTG3E/src/julia-1.13/activate_set.jl:78 Precompiling package dependencies... Precompiling project... 2.6 s ✓ agg_jll CondaPkg Found dependencies: /home/pkgeval/.julia/packages/PyHCTSA/273al/CondaPkg.toml CondaPkg Found dependencies: /home/pkgeval/.julia/packages/CondaPkg/lKlVY/CondaPkg.toml CondaPkg Found dependencies: /home/pkgeval/.julia/packages/PythonCall/5WGSP/CondaPkg.toml CondaPkg Resolving changes + openssl + pyhctsa (pip) + python + uv CondaPkg Initialising pixi │ /home/pkgeval/.julia/artifacts/8429d049f6c01106c62971e9540e146dc068df25/bin/pixi │ init │ --format pixi └ /tmp/jl_NqbDhb/.CondaPkg ✔ Created /tmp/jl_NqbDhb/.CondaPkg/pixi.toml CondaPkg Wrote /tmp/jl_NqbDhb/.CondaPkg/pixi.toml │ [dependencies] │ openssl = ">=3, <3.6" │ uv = ">=0.4" │ │ [dependencies.python] │ version = ">=3.10,!=3.14.0,!=3.14.1,<4" │ build = "*cp*" │ channel = "conda-forge" │ │ [pypi-dependencies.pyhctsa] │ rev = "main" │ git = "https://github.com/dynamicsandneuralsystems/pyhctsa/" │ │ [workspace] │ name = ".CondaPkg" │ description = "automatically generated by CondaPkg.jl" │ platforms = ["linux-64"] │ channel-priority = "strict" └ channels = ["conda-forge"] CondaPkg Installing packages │ /home/pkgeval/.julia/artifacts/8429d049f6c01106c62971e9540e146dc068df25/bin/pixi │ install └ --manifest-path /tmp/jl_NqbDhb/.CondaPkg/pixi.toml ✔ The default environment has been installed. 143.0 s ✓ DimensionalData → DimensionalDataPythonCallExt 9.8 s ✓ Asciicast 32.8 s ✓ PyHCTSA 4 dependencies successfully precompiled in 194 seconds. 126 already precompiled. 1 dependency had output during precompilation: ┌ DimensionalData → DimensionalDataPythonCallExt │ CondaPkg Found dependencies: /home/pkgeval/.julia/packages/PyHCTSA/273al/CondaPkg.toml │ CondaPkg Found dependencies: /home/pkgeval/.julia/packages/CondaPkg/lKlVY/CondaPkg.toml │ CondaPkg Found dependencies: /home/pkgeval/.julia/packages/PythonCall/5WGSP/CondaPkg.toml │ CondaPkg Resolving changes │ + openssl │ + pyhctsa (pip) │ + python │ + uv │ CondaPkg Initialising pixi │ │ /home/pkgeval/.julia/artifacts/8429d049f6c01106c62971e9540e146dc068df25/bin/pixi │ │ init │ │ --format pixi │ └ /tmp/jl_NqbDhb/.CondaPkg │ ✔ Created /tmp/jl_NqbDhb/.CondaPkg/pixi.toml │ CondaPkg Wrote /tmp/jl_NqbDhb/.CondaPkg/pixi.toml │ │ [dependencies] │ │ openssl = ">=3, <3.6" │ │ uv = ">=0.4" │ │ │ │ [dependencies.python] │ │ version = ">=3.10,!=3.14.0,!=3.14.1,<4" │ │ build = "*cp*" │ │ channel = "conda-forge" │ │ │ │ [pypi-dependencies.pyhctsa] │ │ rev = "main" │ │ git = "https://github.com/dynamicsandneuralsystems/pyhctsa/" │ │ │ │ [workspace] │ │ name = ".CondaPkg" │ │ description = "automatically generated by CondaPkg.jl" │ │ platforms = ["linux-64"] │ │ channel-priority = "strict" │ └ channels = ["conda-forge"] │ CondaPkg Installing packages │ │ /home/pkgeval/.julia/artifacts/8429d049f6c01106c62971e9540e146dc068df25/bin/pixi │ │ install │ └ --manifest-path /tmp/jl_NqbDhb/.CondaPkg/pixi.toml │ ✔ The default environment has been installed. └ Precompilation completed after 161.88s ################################################################################ # Testing # Testing PyHCTSA Test Could not use exact versions of packages in manifest, re-resolving. Note: if you do not check your manifest file into source control, then you can probably ignore this message. However, if you do check your manifest file into source control, then you probably want to pass the `allow_reresolve = false` kwarg when calling the `Pkg.test` function. Updating `/tmp/jl_ySjBrU/Project.toml` [2600d445] + Asciicast v0.1.3 [6e4b80f9] + BenchmarkTools v1.8.0 [a93c6f00] + DataFrames v1.8.2 [2913bbd2] + StatsBase v0.34.13 [f8b46487] + TestItemRunner v1.3.2 [1c621080] + TestItems v1.1.0 Updating `/tmp/jl_ySjBrU/Manifest.toml` [a4c015fc] + ANSIColoredPrinters v0.0.1 [1520ce14] + AbstractTrees v0.4.5 [66dad0bd] + AliasTables v1.1.3 [2600d445] + Asciicast v0.1.3 [6e4b80f9] + BenchmarkTools v1.8.0 [944b1d66] + CodecZlib v0.7.9 [34da2185] + Compat v4.18.1 [a8cc5b0e] + Crayons v4.2.0 [a93c6f00] + DataFrames v1.8.2 [864edb3b] + DataStructures v0.19.6 [ffbed154] + DocStringExtensions v0.9.5 [e30172f5] + Documenter v1.19.0 [d7ba0133] + Git v1.5.0 [b5f81e59] + IOCapture v1.0.0 ⌅ [842dd82b] + InlineStrings v1.4.6 [92d709cd] + IrrationalConstants v0.2.6 [0f8b85d8] + JSON3 v1.14.3 [deprecated] [b964fa9f] + LaTeXStrings v1.4.1 [0e77f7df] + LazilyInitializedFields v1.3.0 [2ab3a3ac] + LogExpFunctions v1.0.1 [d0879d2d] + MarkdownAST v0.1.3 [e1d29d7a] + Missings v1.2.0 ⌅ [69de0a69] ↓ Parsers v3.0.0 ⇒ v2.8.8 [2dfb63ee] + PooledArrays v1.4.3 [08abe8d2] + PrettyTables v3.4.8 [43287f4e] + PtrArrays v1.4.0 [2792f1a3] + RegistryInstances v0.1.0 [91c51154] + SentinelArrays v1.4.10 [a2af1166] + SortingAlgorithms v1.2.3 [82ae8749] + StatsAPI v1.8.0 [2913bbd2] + StatsBase v0.34.13 ⌅ [892a3eda] + StringManipulation v0.5.0 [856f2bd8] + StructTypes v1.11.0 [f8b46487] + TestItemRunner v1.3.2 [1c621080] + TestItems v1.1.0 [3bb67fe8] + TranscodingStreams v0.11.3 [2e619515] + Expat_jll v2.8.4+0 [020c3dae] + Git_LFS_jll v3.7.1+0 [f8c6e375] + Git_jll v2.55.0+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [9bd350c2] + OpenSSH_jll v10.5.1+0 [5233c530] + agg_jll v1.4.3+0 [c5432543] + pandoc_jll v3.10.1+0 [9fa8497b] + Future v1.11.0 [9abbd945] + Profile v1.11.0 [3fa0cd96] + REPL v1.11.0 [2f01184e] + SparseArrays v1.13.0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Info Packages marked with [deprecated] are no longer maintained. Use `status --deprecated -m` to see more information. Test Successfully re-resolved Status `/tmp/jl_ySjBrU/Project.toml` [2600d445] Asciicast v0.1.3 [6e4b80f9] BenchmarkTools v1.8.0 [a93c6f00] DataFrames v1.8.2 [682c06a0] JSON v1.8.0 [d6ea422f] MoreMaps v0.3.0 [4f3a0022] PyHCTSA v0.1.0 [6099a3de] PythonCall v0.9.35 [10745b16] Statistics v1.11.5 [2913bbd2] StatsBase v0.34.13 [bd369af6] Tables v1.14.0 [f8b46487] TestItemRunner v1.3.2 [1c621080] TestItems v1.1.0 [f3112013] TimeseriesFeatures v0.7.0 [8ba89e20] Distributed v1.12.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_ySjBrU/Manifest.toml` [a4c015fc] ANSIColoredPrinters v0.0.1 [1520ce14] AbstractTrees v0.4.5 [66dad0bd] AliasTables v1.1.3 [2600d445] Asciicast v0.1.3 [6e4b80f9] BenchmarkTools v1.8.0 [944b1d66] CodecZlib v0.7.9 [34da2185] Compat v4.18.1 [992eb4ea] CondaPkg v0.2.36 [187b0558] ConstructionBase v1.6.0 [a8cc5b0e] Crayons v4.2.0 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.8.2 [864edb3b] DataStructures v0.19.6 [e2d170a0] DataValueInterfaces v1.0.0 [8bb1440f] DelimitedFiles v1.9.1 [0703355e] DimensionalData v0.30.2 [ffbed154] DocStringExtensions v0.9.5 [e30172f5] Documenter v1.19.0 [411431e0] Extents v0.1.6 [d7ba0133] Git v1.5.0 [b5f81e59] IOCapture v1.0.0 ⌅ [842dd82b] InlineStrings v1.4.6 [85a1e053] Interfaces v0.3.2 [8197267c] IntervalSets v0.7.14 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.6 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.8.0 [682c06a0] JSON v1.8.0 [0f8b85d8] JSON3 v1.14.3 [deprecated] [b964fa9f] LaTeXStrings v1.4.1 [0e77f7df] LazilyInitializedFields v1.3.0 [2ab3a3ac] LogExpFunctions v1.0.1 [1914dd2f] MacroTools v0.5.16 [d0879d2d] MarkdownAST v0.1.3 [0b3b1443] MicroMamba v0.1.15 [e1d29d7a] Missings v1.2.0 [d6ea422f] MoreMaps v0.3.0 [bac558e1] OrderedCollections v2.0.1 ⌅ [69de0a69] Parsers v2.8.8 [fa939f87] Pidfile v1.3.0 [2dfb63ee] PooledArrays v1.4.3 [aea7be01] PrecompileTools v1.3.4 [21216c6a] Preferences v1.5.2 [08abe8d2] PrettyTables v3.4.8 [33c8b6b6] ProgressLogging v0.1.6 [43287f4e] PtrArrays v1.4.0 [4f3a0022] PyHCTSA v0.1.0 [6099a3de] PythonCall v0.9.35 [189a3867] Reexport v1.2.2 [2792f1a3] RegistryInstances v0.1.0 [ae029012] Requires v1.3.1 [6c6a2e73] Scratch v1.3.0 [91c51154] SentinelArrays v1.4.10 [a2af1166] SortingAlgorithms v1.2.3 [10745b16] Statistics v1.11.5 [82ae8749] StatsAPI v1.8.0 [2913bbd2] StatsBase v0.34.13 ⌅ [892a3eda] StringManipulation v0.5.0 [856f2bd8] StructTypes v1.11.0 [ec057cc2] StructUtils v2.8.5 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.14.0 [f8b46487] TestItemRunner v1.3.2 [1c621080] TestItems v1.1.0 [f3112013] TimeseriesFeatures v0.7.0 [3bb67fe8] TranscodingStreams v0.11.3 [e17b2a0c] UnsafePointers v1.0.0 [2e619515] Expat_jll v2.8.4+0 [020c3dae] Git_LFS_jll v3.7.1+0 [f8c6e375] Git_jll v2.55.0+0 [94ce4f54] Libiconv_jll v1.18.0+0 [9bd350c2] OpenSSH_jll v10.5.1+0 [5233c530] agg_jll v1.4.3+0 [f8abcde7] micromamba_jll v2.3.1+0 [c5432543] pandoc_jll v3.10.1+0 [4d7b5844] pixi_jll v0.76.2+0 [0dad84c5] ArgTools v1.2.0 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.12.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v1.0.0 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.14.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.14.0 [de0858da] Printf v1.11.0 [9abbd945] Profile v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.13.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.13.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.5.7+0 [deac9b47] LibCURL_jll v8.22.0+0 [e37daf67] LibGit2_jll v1.9.7+0 [29816b5a] LibSSH2_jll v1.11.104+0 [14a3606d] MozillaCACerts_jll v2026.8.13 [4536629a] OpenBLAS_jll v0.3.34+0 [458c3c95] OpenSSL_jll v3.5.8+0 [efcefdf7] PCRE2_jll v10.48.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.2+0 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.70.0+0 [3f19e933] p7zip_jll v17.8.2+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Info Packages marked with [deprecated] are no longer maintained. Testing Running tests... CondaPkg Found dependencies: /home/pkgeval/.julia/packages/PyHCTSA/273al/CondaPkg.toml CondaPkg Found dependencies: /home/pkgeval/.julia/packages/CondaPkg/lKlVY/CondaPkg.toml CondaPkg Found dependencies: /home/pkgeval/.julia/packages/PythonCall/5WGSP/CondaPkg.toml CondaPkg Resolving changes + openssl + pyhctsa (pip) + python + uv CondaPkg Initialising pixi │ /home/pkgeval/.julia/artifacts/8429d049f6c01106c62971e9540e146dc068df25/bin/pixi │ init │ --format pixi └ /tmp/jl_ySjBrU/.CondaPkg ✔ Created /tmp/jl_ySjBrU/.CondaPkg/pixi.toml CondaPkg Wrote /tmp/jl_ySjBrU/.CondaPkg/pixi.toml │ [dependencies] │ openssl = ">=3, <3.6" │ uv = ">=0.4" │ │ [dependencies.python] │ version = ">=3.10,!=3.14.0,!=3.14.1,<4" │ build = "*cp*" │ channel = "conda-forge" │ │ [pypi-dependencies.pyhctsa] │ rev = "main" │ git = "https://github.com/dynamicsandneuralsystems/pyhctsa/" │ │ [workspace] │ name = ".CondaPkg" │ description = "automatically generated by CondaPkg.jl" │ platforms = ["linux-64"] │ channel-priority = "strict" └ channels = ["conda-forge"] CondaPkg Installing packages │ /home/pkgeval/.julia/artifacts/8429d049f6c01106c62971e9540e146dc068df25/bin/pixi │ install └ --manifest-path /tmp/jl_ySjBrU/.CondaPkg/pixi.toml ✔ The default environment has been installed. pyhctsa config loads: Error During Test at /home/pkgeval/.julia/packages/PyHCTSA/273al/test/runtests.jl:32 Got exception outside of a @test InitError: Python: ModuleNotFoundError: No module named 'jpype' Python stacktrace: none Stacktrace: [1] pythrow() @ PythonCall.Core ~/.julia/packages/PythonCall/5WGSP/src/Core/err.jl:77 [2] errcheck(val::Ptr{PythonCall.C.PyObject}) @ PythonCall.Core ~/.julia/packages/PythonCall/5WGSP/src/Core/err.jl:10 [inlined] [3] pyimport(m::String) @ PythonCall.Core ~/.julia/packages/PythonCall/5WGSP/src/Core/builtins.jl:1474 [inlined] [4] __init__() @ PyHCTSA ~/.julia/packages/PyHCTSA/273al/src/PyHCTSA.jl:41 [5] run_module_init(mod::Module, i::Int64) @ Base loading.jl:1623 [6] register_restored_modules(sv::Core.SimpleVector, pkg::Base.PkgId, path::String) @ Base loading.jl:1611 [7] _include_from_serialized(pkg::Base.PkgId, path::String, ocachepath::Nothing, depmods::Vector{Any}; register::Bool) @ Base loading.jl:1499 [8] _require_search_from_serialized(pkg::Base.PkgId, sourcespec::Base.PkgLoadSpec, build_id::UInt128, stalecheck::Bool; reasons::Dict{Symbol, Int64}, DEPOT_PATH::Vector{String}) @ Base loading.jl:2377 [9] require(into::Module, mod::Symbol) @ Base loading.jl:2694 [inlined] [10] top-level scope @ none:1 [11] eval(m::Module, e::Any) @ Core boot.jl:618 [12] run_testitem(mod::Module, filepath::String, use_default_usings::Bool, setups::Vector{Symbol}, package_name::String, original_code::String, line::Int64, column::Int64, test_setup_module_set::TestItemRunner.TestSetupModuleSet, testsetups::Dict{Symbol, Any}) @ TestItemRunner ~/.julia/packages/TestItemRunner/uGBn3/src/TestItemRunner.jl:234 [13] run_testitem_in_testset(ts::Test.DefaultTestSet, testitem::@NamedTuple{filename::String, code::String, name::String, option_tags::Vector{Symbol}, option_default_imports::Bool, option_setup::Vector{Symbol}, skip::Bool, line::Int64, column::Int64}, package_name::String, test_setup_module_set::TestItemRunner.TestSetupModuleSet, testsetups::Dict{Symbol, Any}) @ TestItemRunner ~/.julia/packages/TestItemRunner/uGBn3/src/TestItemRunner.jl:298 [14] (::TestItemRunner.var"#run_node!##0#run_node!##1"{String, TestItemRunner.TestSetupModuleSet, Dict{Symbol, Any}, @NamedTuple{filename::String, code::String, name::String, option_tags::Vector{Symbol}, option_default_imports::Bool, option_setup::Vector{Symbol}, skip::Bool, line::Int64, column::Int64}, Test.DefaultTestSet})() @ TestItemRunner ~/.julia/packages/TestItemRunner/uGBn3/src/TestItemRunner.jl:737 [inlined] [15] macro expansion @ ~/.julia/packages/TestItemRunner/uGBn3/src/TestItemRunner.jl:703 [inlined] [16] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2421 [inlined] [17] with_testset(f::TestItemRunner.var"#run_node!##0#run_node!##1"{String, TestItemRunner.TestSetupModuleSet, Dict{Symbol, Any}, @NamedTuple{filename::String, code::String, name::String, option_tags::Vector{Symbol}, option_default_imports::Bool, option_setup::Vector{Symbol}, skip::Bool, line::Int64, column::Int64}, Test.DefaultTestSet}, ts::Test.DefaultTestSet) @ TestItemRunner ~/.julia/packages/TestItemRunner/uGBn3/src/TestItemRunner.jl:702 during initialization of module PyHCTSA Fault at memory address: 0x8 [287] signal 11 (1): Segmentation fault in expression starting at /home/pkgeval/.julia/packages/PyHCTSA/273al/test/runtests.jl:39 _Py_TYPE at /usr/local/src/conda/python-split-3.14.7/Include/object.h:270:18 [inlined] PyObject_GetAttr at /usr/local/src/conda/python-split-3.14.7/Objects/object.c:1292:24 PyObject_GetAttr at /home/pkgeval/.julia/packages/PythonCall/5WGSP/src/C/pointers.jl:302:0 [inlined] macro expansion at /home/pkgeval/.julia/packages/PythonCall/5WGSP/src/Core/Py.jl:107:0 [inlined] pygetattr at /home/pkgeval/.julia/packages/PythonCall/5WGSP/src/Core/builtins.jl:58:0 [inlined] getproperty at /home/pkgeval/.julia/packages/PythonCall/5WGSP/src/Core/Py.jl:264:0 (pc: 37) load_config at /home/pkgeval/.julia/packages/PyHCTSA/273al/src/PyHCTSA.jl:382:0 (pc: 4) load_config at /home/pkgeval/.julia/packages/PyHCTSA/273al/src/PyHCTSA.jl:379:0 [inlined] build_mops at /home/pkgeval/.julia/packages/PyHCTSA/273al/src/PyHCTSA.jl:386:0 (pc: 1) unknown function (ip: 0x7681ff7b77c2) at (unknown file) _jl_invoke at /source/src/gf.c:4590:23 [inlined] ijl_apply_generic at /source/src/gf.c:4838:12 jl_apply at /source/src/julia.h:2538:12 [inlined] do_call at /source/src/interpreter.c:123:26 eval_value at /source/src/interpreter.c:259:16 eval_stmt_value at /source/src/interpreter.c:194:23 [inlined] eval_body at /source/src/interpreter.c:829:21 jl_interpret_toplevel_thunk at /source/src/interpreter.c:1052:21 ijl_eval_thunk at /source/src/toplevel.c:772:18 jl_toplevel_eval_flex at /source/src/toplevel.c:716:26 jl_eval_toplevel_stmts at /source/src/toplevel.c:601:15 jl_toplevel_eval_flex at /source/src/toplevel.c:688:27 ijl_toplevel_eval at /source/src/toplevel.c:786:12 ijl_toplevel_eval_in at /source/src/toplevel.c:831:13 eval at ./boot.jl:618:0 (pc: 1) include_string at ./loading.jl:3291:0 (pc: 140) include_string at ./loading.jl:3301:0 (pc: 1) _jl_invoke at /source/src/gf.c:4590:23 [inlined] ijl_apply_generic at /source/src/gf.c:4838:12 #run_testitem##6 at /home/pkgeval/.julia/packages/TestItemRunner/uGBn3/src/TestItemRunner.jl:258:0 [inlined] withpath at /home/pkgeval/.julia/packages/TestItemRunner/uGBn3/src/vendored_code.jl:7:0 (pc: 72) #run_testitem##4 at /home/pkgeval/.julia/packages/TestItemRunner/uGBn3/src/TestItemRunner.jl:257:0 [inlined] cd at ./file.jl:113:0 (pc: 19) run_testitem at /home/pkgeval/.julia/packages/TestItemRunner/uGBn3/src/TestItemRunner.jl:256:0 (pc: 318) unknown function (ip: 0x76825eb992bc) at (unknown file) _jl_invoke at /source/src/gf.c:4590:23 [inlined] ijl_apply_generic at /source/src/gf.c:4838:12 run_testitem_in_testset at /home/pkgeval/.julia/packages/TestItemRunner/uGBn3/src/TestItemRunner.jl:298:0 (pc: 45) #run_node!##0 at /home/pkgeval/.julia/packages/TestItemRunner/uGBn3/src/TestItemRunner.jl:737:0 [inlined] macro expansion at /home/pkgeval/.julia/packages/TestItemRunner/uGBn3/src/TestItemRunner.jl:703:0 [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.14/Test/src/Test.jl:2421:0 [inlined] with_testset at /home/pkgeval/.julia/packages/TestItemRunner/uGBn3/src/TestItemRunner.jl:702:0 (pc: 110) unknown function (ip: 0x76825eb96dc0) at (unknown file) _jl_invoke at /source/src/gf.c:4590:23 [inlined] ijl_apply_generic at /source/src/gf.c:4838:12 run_node! at /home/pkgeval/.julia/packages/TestItemRunner/uGBn3/src/TestItemRunner.jl:736:0 (pc: 68) #run_node!##2 at /home/pkgeval/.julia/packages/TestItemRunner/uGBn3/src/TestItemRunner.jl:746:0 (pc: 7) macro expansion at /home/pkgeval/.julia/packages/TestItemRunner/uGBn3/src/TestItemRunner.jl:703:0 [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.14/Test/src/Test.jl:2421:0 [inlined] with_testset at /home/pkgeval/.julia/packages/TestItemRunner/uGBn3/src/TestItemRunner.jl:702:0 (pc: 105) run_node! at /home/pkgeval/.julia/packages/TestItemRunner/uGBn3/src/TestItemRunner.jl:745:0 (pc: 179) unknown function (ip: 0x76825eb95492) at (unknown file) _jl_invoke at /source/src/gf.c:4590:23 [inlined] ijl_apply_generic at /source/src/gf.c:4838:12 #29 at /home/pkgeval/.julia/packages/TestItemRunner/uGBn3/src/TestItemRunner.jl:861:0 (pc: 11) macro expansion at /home/pkgeval/.julia/packages/TestItemRunner/uGBn3/src/TestItemRunner.jl:713:0 [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.14/Test/src/Test.jl:2421:0 [inlined] with_root_testset at /home/pkgeval/.julia/packages/TestItemRunner/uGBn3/src/TestItemRunner.jl:712:0 (pc: 105) #run_tests#18 at /home/pkgeval/.julia/packages/TestItemRunner/uGBn3/src/TestItemRunner.jl:860:0 (pc: 635) run_tests at /home/pkgeval/.julia/packages/TestItemRunner/uGBn3/src/TestItemRunner.jl:791:0 (pc: 1) unknown function (ip: 0x76825eb040e2) at (unknown file) _jl_invoke at /source/src/gf.c:4590:23 [inlined] ijl_apply_generic at /source/src/gf.c:4838:12 jl_apply at /source/src/julia.h:2538:12 [inlined] do_call at /source/src/interpreter.c:123:26 eval_value at /source/src/interpreter.c:259:16 eval_stmt_value at /source/src/interpreter.c:194:23 [inlined] eval_body at /source/src/interpreter.c:829:21 jl_interpret_toplevel_thunk at /source/src/interpreter.c:1052:21 ijl_eval_thunk at /source/src/toplevel.c:772:18 jl_toplevel_eval_flex at /source/src/toplevel.c:716:26 jl_eval_toplevel_stmts at /source/src/toplevel.c:601:15 jl_toplevel_eval_flex at /source/src/toplevel.c:688:27 ijl_toplevel_eval at /source/src/toplevel.c:786:12 ijl_toplevel_eval_in at /source/src/toplevel.c:831:13 eval at ./boot.jl:618:0 (pc: 1) include_string at ./loading.jl:3291:0 (pc: 140) _jl_invoke at /source/src/gf.c:4590:23 [inlined] ijl_apply_generic at /source/src/gf.c:4838:12 _include at ./loading.jl:3353:0 (pc: 123) include at ./Base.jl:335:0 (pc: 1) IncludeInto at ./Base.jl:336:0 (pc: 2) jfptr_IncludeInto_1.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4590:23 [inlined] ijl_apply_generic at /source/src/gf.c:4838:12 jl_apply at /source/src/julia.h:2538:12 [inlined] do_call at /source/src/interpreter.c:123:26 eval_value at /source/src/interpreter.c:259:16 eval_stmt_value at /source/src/interpreter.c:194:23 [inlined] eval_body at /source/src/interpreter.c:829:21 jl_interpret_toplevel_thunk at /source/src/interpreter.c:1052:21 ijl_eval_thunk at /source/src/toplevel.c:772:18 jl_toplevel_eval_flex at /source/src/toplevel.c:716:26 jl_eval_toplevel_stmts at /source/src/toplevel.c:601:15 jl_toplevel_eval_flex at /source/src/toplevel.c:688:27 ijl_toplevel_eval at /source/src/toplevel.c:786:12 ijl_toplevel_eval_in at /source/src/toplevel.c:831:13 eval at ./boot.jl:618:0 (pc: 1) __script_entry_eval at ./client.jl:106:0 [inlined] exec_options at ./client.jl:350:0 (pc: 426) _start at ./client.jl:695:0 (pc: 217) jfptr__start_0.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4590:23 [inlined] ijl_apply_generic at /source/src/gf.c:4838:12 jl_apply at /source/src/julia.h:2538:12 [inlined] true_main at /source/src/jlapi.c:990:29 jl_repl_entrypoint at /source/src/jlapi.c:1157:15 main at /source/cli/loader_exe.c:117:15 unknown function (ip: 0x76827c473249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S Allocations: 55057570 (Pool: 55057141; Big: 429); GC: 24 Testing failed after 165.17s ERROR: LoadError: Package PyHCTSA errored during testing (received signal: 11) Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3298 [3] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:587 [4] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172 [5] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [6] test(pkg::String; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [inlined] [7] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:223 in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 PkgEval crashed after 478.14s: a segmentation fault happened ################################################################################ # Bug reporting # The package crashed during testing (reason=segfault), but PkgEval was unable to reproduce the crash under rr (status=crash, reason=abort). For debugging, here is the tail end of the rr log: > [2a0f44e3] Base64 v1.11.0 > [ade2ca70] Dates v1.11.0 > [8ba89e20] Distributed v1.12.0 > [f43a241f] Downloads v1.7.0 > [7b1f6079] FileWatching v1.11.0 > [9fa8497b] Future v1.11.0 > [b77e0a4c] InteractiveUtils v1.11.0 > [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0 > [4af54fe1] LazyArtifacts v1.11.0 > [b27032c2] LibCURL v1.0.0 > [76f85450] LibGit2 v1.11.0 > [8f399da3] Libdl v1.11.0 > [37e2e46d] LinearAlgebra v1.14.0 > [56ddb016] Logging v1.11.0 > [d6f4376e] Markdown v1.11.0 > [a63ad114] Mmap v1.11.0 > [ca575930] NetworkOptions v1.3.0 > [44cfe95a] Pkg v1.14.0 > [de0858da] Printf v1.11.0 > [9abbd945] Profile v1.11.0 > [3fa0cd96] REPL v1.11.0 > [9a3f8284] Random v1.11.0 > [ea8e919c] SHA v1.13.0 > [9e88b42a] Serialization v1.11.0 > [6462fe0b] Sockets v1.11.0 > [2f01184e] SparseArrays v1.13.0 > [f489334b] StyledStrings v1.13.0 > [fa267f1f] TOML v1.0.3 > [a4e569a6] Tar v1.10.0 > [8dfed614] Test v1.11.0 > [cf7118a7] UUIDs v1.11.0 > [4ec0a83e] Unicode v1.11.0 > [e66e0078] CompilerSupportLibraries_jll v1.5.7+0 > [deac9b47] LibCURL_jll v8.22.0+0 > [e37daf67] LibGit2_jll v1.9.7+0 > [29816b5a] LibSSH2_jll v1.11.104+0 > [14a3606d] MozillaCACerts_jll v2026.8.13 > [4536629a] OpenBLAS_jll v0.3.34+0 > [458c3c95] OpenSSL_jll v3.5.8+0 > [efcefdf7] PCRE2_jll v10.48.0+0 > [bea87d4a] SuiteSparse_jll v7.10.1+0 > [83775a58] Zlib_jll v1.3.2+0 > [3161d3a3] Zstd_jll v1.5.7+1 > [8e850b90] libblastrampoline_jll v5.15.0+0 > [8e850ede] nghttp2_jll v1.70.0+0 > [3f19e933] p7zip_jll v17.8.2+0 > Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. > Info Packages marked with [deprecated] are no longer maintained. > Testing Running tests... > Activating project at `~/.julia/environments/pkgeval` > Activating project at `/tmp/jl_RsLNXm` > Warning Some loaded packages differ from the active environment, which may affect reproducibility and trigger recompilation: > JSON: loaded v0.21.4, environment specifies v1.8.0 > Switching execution to under rr > [FATAL src/Task.cc:3848:spawn() errno: EPERM] PTRACE_SEIZE failed for tid 356; child probably died before reaching SIGSTOP > Child's message: > === Start rr backtrace: > /home/pkgeval/.julia/artifacts/c73480318b081035ff316b4c4cc797feb1dcd626/bin/rr[0x556001] > /home/pkgeval/.julia/artifacts/c73480318b081035ff316b4c4cc797feb1dcd626/bin/rr[0x695feb] > /home/pkgeval/.julia/artifacts/c73480318b081035ff316b4c4cc797feb1dcd626/bin/rr(_ZN2rr4Task5spawnERNS_7SessionERNS_8ScopedFdEPS3_S5_PiRKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEERKSt6vectorISC_SaISC_EESJ_i+0xbf0)[0x64f170] > /home/pkgeval/.julia/artifacts/c73480318b081035ff316b4c4cc797feb1dcd626/bin/rr(_ZN2rr13RecordSessionC1ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEERKSt6vectorIS6_SaIS6_EESD_RKNS_20DisableCPUIDFeaturesENS0_16SyscallBufferingEiNS_7BindCPUES8_PKNS_9TraceUuidEbbbb+0x317)[0x58b4b7] > /home/pkgeval/.julia/artifacts/c73480318b081035ff316b4c4cc797feb1dcd626/bin/rr(_ZN2rr13RecordSession6createERKSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS7_EESB_RKNS_20DisableCPUIDFeaturesENS0_16SyscallBufferingEhNS_7BindCPUERKS7_PKNS_9TraceUuidEbbbbbb+0xc1e)[0x58c98e] > /home/pkgeval/.julia/artifacts/c73480318b081035ff316b4c4cc797feb1dcd626/bin/rr(_ZN2rr13RecordCommand3runERSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS7_EE+0x66f)[0x57eb7f] > /home/pkgeval/.julia/artifacts/c73480318b081035ff316b4c4cc797feb1dcd626/bin/rr(main+0x181)[0x4d5e61] > /lib/x86_64-linux-gnu/libc.so.6(+0x2724a)[0x706568ece24a] > /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85)[0x706568ece305] > /home/pkgeval/.julia/artifacts/c73480318b081035ff316b4c4cc797feb1dcd626/bin/rr[0x4d8955] > === End rr backtrace > > Testing failed after 30.26s > > ERROR: LoadError: Package PyHCTSA errored during testing (received signal: 6) > Stacktrace: > [1] pkgerror(msg::String) > @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68 > [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) > @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3298 > [3] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) > @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:587 > [4] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) > @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172 > [5] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) > @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 > [6] test(pkg::String; kwargs::@Kwargs{julia_args::Cmd}) > @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [inlined] > [7] top-level scope > @ /PkgEval.jl/scripts/evaluate.jl:221 > in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 > > PkgEval crashed after 300.21s: the process was aborted > > > ################################################################################ > # Bug reporting > # > > Finalizing trace... > > BugReporting completed after 28.05s > Uploaded rr trace to https://s3.amazonaws.com/julialang-reports/nanosoldier/pkgeval/rr/PyHCTSA-1789052386.tar.zst