Package evaluation to test MixedAnova on Julia 1.14.0-DEV.3155 (07edee4e4c*) started at 2026-09-11T02:33:47.192 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 16.97s ################################################################################ # Installation # Installing MixedAnova... Resolving package versions... Updating `~/.julia/environments/v1.14/Project.toml` [72e9ff3b] + MixedAnova v0.5.2 Updating `~/.julia/environments/v1.14/Manifest.toml` [7d9f7c33] + Accessors v0.1.45 [66dad0bd] + AliasTables v1.1.3 [69666777] + Arrow v2.8.1 [31f734f8] + ArrowTypes v2.3.0 [c3b6d118] + BitIntegers v0.3.7 [523fee87] + CodecBzip2 v0.8.5 [5ba52731] + CodecLz4 v0.4.6 [944b1d66] + CodecZlib v0.7.9 [6b39b394] + CodecZstd v0.8.7 [861a8166] + Combinatorics v1.1.0 [38540f10] + CommonSolve v0.2.14 [bbf7d656] + CommonSubexpressions v0.3.1 [34da2185] + Compat v4.18.1 [a33af91c] + CompositionsBase v0.1.2 [f0e56b4a] + ConcurrentUtilities v2.6.0 [187b0558] + ConstructionBase v1.6.0 [a8cc5b0e] + Crayons v4.2.0 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.8.2 ⌅ [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.16.0 [31c24e10] + Distributions v0.25.131 [ffbed154] + DocStringExtensions v0.9.5 [4e289a0a] + EnumX v1.0.7 [e2ba6199] + ExprTools v0.1.11 [1a297f60] + FillArrays v1.17.0 ⌅ [9d5cd8c9] + FixedEffectModels v1.8.0 ⌅ [c8885935] + FixedEffects v2.7.0 [f6369f11] + ForwardDiff v1.4.5 ⌃ [38e38edf] + GLM v1.8.3 ⌃ [a0844989] + Gamma v1.1.0 [6407cd72] + GroupedArrays v0.3.5 [34004b35] + HypergeometricFunctions v0.3.30 ⌅ [842dd82b] + InlineStrings v1.4.6 [3587e190] + InverseFunctions v0.1.17 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.6 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.8.0 [682c06a0] + JSON v1.8.0 [0f8b85d8] + JSON3 v1.14.3 [deprecated] [b964fa9f] + LaTeXStrings v1.4.1 ⌅ [2ab3a3ac] + LogExpFunctions v0.3.29 [1914dd2f] + MacroTools v0.5.16 [b8f27783] + MathOptInterface v1.53.0 [fdba3010] + MathProgBase v0.7.8 [e1d29d7a] + Missings v1.2.0 [72e9ff3b] + MixedAnova v0.5.2 ⌅ [ff71e718] + MixedModels v4.8.2 [78c3b35d] + Mocking v0.8.1 [d8a4904e] + MutableArithmetics v1.8.0 ⌅ [76087f3c] + NLopt v0.6.5 [77ba4419] + NaNMath v1.1.4 ⌅ [bac558e1] + OrderedCollections v1.8.2 ⌃ [90014a1f] + PDMats v0.11.35 ⌅ [69de0a69] + Parsers v2.8.8 [2dfb63ee] + PooledArrays v1.4.3 [aea7be01] + PrecompileTools v1.3.4 [21216c6a] + Preferences v1.5.2 [08abe8d2] + PrettyTables v3.4.8 [92933f4c] + ProgressMeter v1.11.0 [43287f4e] + PtrArrays v1.4.0 [1fd47b50] + QuadGK v2.11.3 [189a3867] + Reexport v1.2.2 [79098fc4] + Rmath v0.9.0 [f2b01f46] + Roots v3.0.8 [6c6a2e73] + Scratch v1.3.0 [91c51154] + SentinelArrays v1.4.10 [1277b4bf] + ShiftedArrays v2.0.0 [66db9d55] + SnoopPrecompile v1.0.3 [a2af1166] + SortingAlgorithms v1.2.3 [276daf66] + SpecialFunctions v2.9.0 [90137ffa] + StaticArrays v1.9.20 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.5 [82ae8749] + StatsAPI v1.8.0 ⌅ [2913bbd2] + StatsBase v0.33.21 ⌅ [4c63d2b9] + StatsFuns v1.5.3 ⌅ [3eaba693] + StatsModels v0.6.33 ⌅ [892a3eda] + StringManipulation v0.5.0 ⌅ [354b36f9] + StringViews v1.3.7 [856f2bd8] + StructTypes v1.11.0 [ec057cc2] + StructUtils v2.8.5 [dc5dba14] + TZJData v1.6.0+2025c [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.14.0 [f269a46b] + TimeZones v1.22.2 [3bb67fe8] + TranscodingStreams v0.11.3 ⌅ [ec2bfdc2] + Vcov v0.7.1 [6e34b625] + Bzip2_jll v1.0.9+0 [5ced341a] + Lz4_jll v1.10.1+0 [079eb43e] + NLopt_jll v2.11.0+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.2+0 [0dad84c5] + ArgTools v1.2.0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.12.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v1.0.0 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.14.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.14.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.13.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.13.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.5.7+0 [deac9b47] + LibCURL_jll v8.22.0+0 [e37daf67] + LibGit2_jll v1.9.7+0 [29816b5a] + LibSSH2_jll v1.11.104+0 [14a3606d] + MozillaCACerts_jll v2026.8.13 [4536629a] + OpenBLAS_jll v0.3.34+0 [05823500] + OpenLibm_jll v0.8.8+0 [458c3c95] + OpenSSL_jll v3.5.8+0 [efcefdf7] + PCRE2_jll v10.48.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.2+0 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.70.0+0 [3f19e933] + p7zip_jll v17.8.2+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Info Packages marked with [deprecated] are no longer maintained. Use `status --deprecated -m` to see more information. Installation completed after 7.64s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompiling project... 10.2 s ✓ NLopt Minimizing 2 Time: 0:00:01 ( 0.69 s/it) objective: 1790.1256369894638   Minimizing 57 Time: 0:00:01 (26.83 ms/it) Minimizing 2 Time: 0:00:00 ( 0.16 s/it) objective: 2380.5668557322774   Minimizing 15 Time: 0:00:00 (28.67 ms/it) objective: 2419.604991481375   Minimizing 31 Time: 0:00:00 (17.29 ms/it) objective: 2362.5581221709335   Minimizing 48 Time: 0:00:00 (13.40 ms/it) objective: 2361.8373743517136   Minimizing 65 Time: 0:00:00 (11.51 ms/it) objective: 2361.8023305234738   Minimizing 82 Time: 0:00:00 (10.43 ms/it) objective: 2361.778721167041   Minimizing 98 Time: 0:00:00 ( 9.77 ms/it) objective: 2361.7538640813123   Minimizing 114 Time: 0:00:01 ( 9.30 ms/it) objective: 2361.7115950908305   Minimizing 130 Time: 0:00:01 ( 8.94 ms/it) objective: 2361.565053334751   Minimizing 146 Time: 0:00:01 ( 8.66 ms/it) objective: 2361.5568396313583   Minimizing 162 Time: 0:00:01 ( 8.44 ms/it) objective: 2361.5493922176593   Minimizing 179 Time: 0:00:01 ( 8.24 ms/it) objective: 2361.5467345868196   Minimizing 195 Time: 0:00:01 ( 8.08 ms/it) objective: 2361.546114672099   Minimizing 211 Time: 0:00:01 ( 7.95 ms/it) objective: 2361.5457982403514   Minimizing 228 Time: 0:00:01 ( 7.83 ms/it) objective: 2361.5457723389386   Minimizing 246 Time: 0:00:01 ( 7.68 ms/it) objective: 2361.5457686587474   Minimizing 250 Time: 0:00:01 ( 7.66 ms/it) 103.9 s ✓ MixedModels 10.2 s ✓ MixedAnova 3 dependencies successfully precompiled in 126 seconds. 175 already precompiled. 1 dependency had output during precompilation: ┌ MixedModels │ Minimizing 2 Time: 0:00:01 ( 0.69 s/it) │ objective: 1790.1256369894638  │  Minimizing 57 Time: 0:00:01 (26.83 ms/it) │ Minimizing 2 Time: 0:00:00 ( 0.16 s/it) │ objective: 2380.5668557322774  │  Minimizing 15 Time: 0:00:00 (28.67 ms/it) │ objective: 2419.604991481375  │  Minimizing 31 Time: 0:00:00 (17.29 ms/it) │ objective: 2362.5581221709335  │  Minimizing 48 Time: 0:00:00 (13.40 ms/it) │ objective: 2361.8373743517136  │  Minimizing 65 Time: 0:00:00 (11.51 ms/it) │ objective: 2361.8023305234738  │  Minimizing 82 Time: 0:00:00 (10.43 ms/it) │ objective: 2361.778721167041  │  Minimizing 98 Time: 0:00:00 ( 9.77 ms/it) │ objective: 2361.7538640813123  │  Minimizing 114 Time: 0:00:01 ( 9.30 ms/it) │ objective: 2361.7115950908305  │  Minimizing 130 Time: 0:00:01 ( 8.94 ms/it) │ objective: 2361.565053334751  │  Minimizing 146 Time: 0:00:01 ( 8.66 ms/it) │ objective: 2361.5568396313583  │  Minimizing 162 Time: 0:00:01 ( 8.44 ms/it) │ objective: 2361.5493922176593  │  Minimizing 179 Time: 0:00:01 ( 8.24 ms/it) │ objective: 2361.5467345868196  │  Minimizing 195 Time: 0:00:01 ( 8.08 ms/it) │ objective: 2361.546114672099  │  Minimizing 211 Time: 0:00:01 ( 7.95 ms/it) │ objective: 2361.5457982403514  │  Minimizing 228 Time: 0:00:01 ( 7.83 ms/it) │ objective: 2361.5457723389386  │  Minimizing 246 Time: 0:00:01 ( 7.68 ms/it) │ objective: 2361.5457686587474  │  Minimizing 250 Time: 0:00:01 ( 7.66 ms/it) └ Precompilation completed after 143.57s ################################################################################ # Testing # Testing MixedAnova Status `/tmp/jl_GmyDdl/Project.toml` [336ed68f] CSV v0.10.17 [324d7699] CategoricalArrays v1.1.1 [a93c6f00] DataFrames v1.8.2 ⌃ [38e38edf] GLM v1.8.3 [72e9ff3b] MixedAnova v0.5.2 ⌅ [ff71e718] MixedModels v4.8.2 [ce6b1742] RDatasets v0.8.1 [8dfed614] Test v1.11.0 Status `/tmp/jl_GmyDdl/Manifest.toml` [7d9f7c33] Accessors v0.1.45 [66dad0bd] AliasTables v1.1.3 [69666777] Arrow v2.8.1 [31f734f8] ArrowTypes v2.3.0 [c3b6d118] BitIntegers v0.3.7 [336ed68f] CSV v0.10.17 [324d7699] CategoricalArrays v1.1.1 [523fee87] CodecBzip2 v0.8.5 [5ba52731] CodecLz4 v0.4.6 [944b1d66] CodecZlib v0.7.9 [6b39b394] CodecZstd v0.8.7 [861a8166] Combinatorics v1.1.0 [38540f10] CommonSolve v0.2.14 [bbf7d656] CommonSubexpressions v0.3.1 [34da2185] Compat v4.18.1 [a33af91c] CompositionsBase v0.1.2 [f0e56b4a] ConcurrentUtilities v2.6.0 [187b0558] ConstructionBase v1.6.0 [a8cc5b0e] Crayons v4.2.0 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.8.2 ⌅ [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.16.0 [31c24e10] Distributions v0.25.131 [ffbed154] DocStringExtensions v0.9.5 [4e289a0a] EnumX v1.0.7 [e2ba6199] ExprTools v0.1.11 [5789e2e9] FileIO v1.20.0 [48062228] FilePathsBase v0.9.24 [1a297f60] FillArrays v1.17.0 ⌅ [9d5cd8c9] FixedEffectModels v1.8.0 ⌅ [c8885935] FixedEffects v2.7.0 [f6369f11] ForwardDiff v1.4.5 ⌃ [38e38edf] GLM v1.8.3 ⌃ [a0844989] Gamma v1.1.0 [6407cd72] GroupedArrays v0.3.5 [34004b35] HypergeometricFunctions v0.3.30 ⌅ [842dd82b] InlineStrings v1.4.6 [3587e190] InverseFunctions v0.1.17 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.6 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.8.0 [682c06a0] JSON v1.8.0 [0f8b85d8] JSON3 v1.14.3 [deprecated] [b964fa9f] LaTeXStrings v1.4.1 ⌅ [2ab3a3ac] LogExpFunctions v0.3.29 [1914dd2f] MacroTools v0.5.16 [b8f27783] MathOptInterface v1.53.0 [fdba3010] MathProgBase v0.7.8 [e1d29d7a] Missings v1.2.0 [72e9ff3b] MixedAnova v0.5.2 ⌅ [ff71e718] MixedModels v4.8.2 [78c3b35d] Mocking v0.8.1 [d8a4904e] MutableArithmetics v1.8.0 ⌅ [76087f3c] NLopt v0.6.5 [77ba4419] NaNMath v1.1.4 ⌅ [bac558e1] OrderedCollections v1.8.2 ⌃ [90014a1f] PDMats v0.11.35 ⌅ [69de0a69] Parsers v2.8.8 [2dfb63ee] PooledArrays v1.4.3 [aea7be01] PrecompileTools v1.3.4 [21216c6a] Preferences v1.5.2 [08abe8d2] PrettyTables v3.4.8 [92933f4c] ProgressMeter v1.11.0 [43287f4e] PtrArrays v1.4.0 [1fd47b50] QuadGK v2.11.3 [df47a6cb] RData v1.1.0 [ce6b1742] RDatasets v0.8.1 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [79098fc4] Rmath v0.9.0 [f2b01f46] Roots v3.0.8 [6c6a2e73] Scratch v1.3.0 [91c51154] SentinelArrays v1.4.10 [1277b4bf] ShiftedArrays v2.0.0 [66db9d55] SnoopPrecompile v1.0.3 [a2af1166] SortingAlgorithms v1.2.3 [276daf66] SpecialFunctions v2.9.0 [90137ffa] StaticArrays v1.9.20 [1e83bf80] StaticArraysCore v1.4.4 [10745b16] Statistics v1.11.5 [82ae8749] StatsAPI v1.8.0 ⌅ [2913bbd2] StatsBase v0.33.21 ⌅ [4c63d2b9] StatsFuns v1.5.3 ⌅ [3eaba693] StatsModels v0.6.33 ⌅ [892a3eda] StringManipulation v0.5.0 ⌅ [354b36f9] StringViews v1.3.7 [856f2bd8] StructTypes v1.11.0 [ec057cc2] StructUtils v2.8.5 [dc5dba14] TZJData v1.6.0+2025c [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.14.0 [f269a46b] TimeZones v1.22.2 [3bb67fe8] TranscodingStreams v0.11.3 ⌅ [ec2bfdc2] Vcov v0.7.1 [ea10d353] WeakRefStrings v1.4.3 [76eceee3] WorkerUtilities v1.6.1 [6e34b625] Bzip2_jll v1.0.9+0 [5ced341a] Lz4_jll v1.10.1+0 [079eb43e] NLopt_jll v2.11.0+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.2+0 [0dad84c5] ArgTools v1.2.0 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.12.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v1.0.0 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.14.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.14.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.13.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.13.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.5.7+0 [deac9b47] LibCURL_jll v8.22.0+0 [e37daf67] LibGit2_jll v1.9.7+0 [29816b5a] LibSSH2_jll v1.11.104+0 [14a3606d] MozillaCACerts_jll v2026.8.13 [4536629a] OpenBLAS_jll v0.3.34+0 [05823500] OpenLibm_jll v0.8.8+0 [458c3c95] OpenSSL_jll v3.5.8+0 [efcefdf7] PCRE2_jll v10.48.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.2+0 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.70.0+0 [3f19e933] p7zip_jll v17.8.2+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Info Packages marked with [deprecated] are no longer maintained. Testing Running tests... WARNING: Wrapping `Vararg` directly in UnionAll is deprecated (wrap the tuple instead). You may need to write `f(x::Vararg{T})` rather than `f(x::Vararg{<:T})` or `f(x::Vararg{T}) where T` instead of `f(x::Vararg{T} where T)`. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Wrapping `Vararg` directly in UnionAll is deprecated (wrap the tuple instead). You may need to write `f(x::Vararg{T})` rather than `f(x::Vararg{<:T})` or `f(x::Vararg{T}) where T` instead of `f(x::Vararg{T} where T)`. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Wrapping `Vararg` directly in UnionAll is deprecated (wrap the tuple instead). You may need to write `f(x::Vararg{T})` rather than `f(x::Vararg{<:T})` or `f(x::Vararg{T}) where T` instead of `f(x::Vararg{T} where T)`. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Method definition coefnames(MixedAnova.AnovaResult{T, MixedAnova.FTest, N} where N) where {T<:(StatsModels.TableRegressionModel{var"#s27", T} where T where var"#s27"<:Union{GLM.GeneralizedLinearModel{G, L} where L<:GLM.LinPred where G<:(GLM.GlmResp{V, D, L} where L<:GLM.Link where D<:(Distributions.Distribution{Distributions.ArrayLikeVariate{0}, S} where S<:Distributions.ValueSupport) where V<:(AbstractArray{T, 1} where T<:AbstractFloat)), GLM.LinearModel{L, T} where T<:GLM.LinPred where L<:(GLM.LmResp{V} where V<:(AbstractArray{T, 1} where T<:AbstractFloat))})} in module MixedAnova at /home/pkgeval/.julia/packages/MixedAnova/wGwIh/src/GLM/io.jl:3 overwritten at /home/pkgeval/.julia/packages/MixedAnova/wGwIh/src/GLM/io.jl:12. WARNING: Method definition coefnames(StatsModels.TableRegressionModel{var"#s27", T} where T where var"#s27"<:Union{GLM.GeneralizedLinearModel{G, L} where L<:GLM.LinPred where G<:(GLM.GlmResp{V, D, L} where L<:GLM.Link where D<:(Distributions.Distribution{Distributions.ArrayLikeVariate{0}, S} where S<:Distributions.ValueSupport) where V<:(AbstractArray{T, 1} where T<:AbstractFloat)), GLM.LinearModel{L, T} where T<:GLM.LinPred where L<:(GLM.LmResp{V} where V<:(AbstractArray{T, 1} where T<:AbstractFloat))}, Base.Val{:anova}) in module MixedAnova at /home/pkgeval/.julia/packages/MixedAnova/wGwIh/src/GLM/io.jl:9 overwritten at /home/pkgeval/.julia/packages/MixedAnova/wGwIh/src/GLM/io.jl:18. WARNING: Wrapping `Vararg` directly in UnionAll is deprecated (wrap the tuple instead). You may need to write `f(x::Vararg{T})` rather than `f(x::Vararg{<:T})` or `f(x::Vararg{T}) where T` instead of `f(x::Vararg{T} where T)`. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Wrapping `Vararg` directly in UnionAll is deprecated (wrap the tuple instead). You may need to write `f(x::Vararg{T})` rather than `f(x::Vararg{<:T})` or `f(x::Vararg{T}) where T` instead of `f(x::Vararg{T} where T)`. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Wrapping `Vararg` directly in UnionAll is deprecated (wrap the tuple instead). You may need to write `f(x::Vararg{T})` rather than `f(x::Vararg{<:T})` or `f(x::Vararg{T}) where T` instead of `f(x::Vararg{T} where T)`. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Wrapping `Vararg` directly in UnionAll is deprecated (wrap the tuple instead). You may need to write `f(x::Vararg{T})` rather than `f(x::Vararg{<:T})` or `f(x::Vararg{T}) where T` instead of `f(x::Vararg{T} where T)`. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Wrapping `Vararg` directly in UnionAll is deprecated (wrap the tuple instead). You may need to write `f(x::Vararg{T})` rather than `f(x::Vararg{<:T})` or `f(x::Vararg{T}) where T` instead of `f(x::Vararg{T} where T)`. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Wrapping `Vararg` directly in UnionAll is deprecated (wrap the tuple instead). You may need to write `f(x::Vararg{T})` rather than `f(x::Vararg{<:T})` or `f(x::Vararg{T}) where T` instead of `f(x::Vararg{T} where T)`. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Method definition formula(StatsModels.TableRegressionModel{M, T} where T where M) in module MixedAnova at /home/pkgeval/.julia/packages/MixedAnova/wGwIh/src/GLM/fit.jl:4 overwritten at /home/pkgeval/.julia/packages/MixedAnova/wGwIh/src/FixedEffectModels/fit.jl:4. WARNING: Method definition width(StatsModels.FunctionTerm{Forig, Fanon, Names} where Names where Fanon where Forig) in module StatsModels at /home/pkgeval/.julia/packages/StatsModels/fK0P3/src/terms.jl:128 overwritten in module MixedAnova at /home/pkgeval/.julia/packages/MixedAnova/wGwIh/src/FixedEffectModels/fit.jl:11. WARNING: Method definition dof(FixedEffectModels.FixedEffectModel) in module FixedEffectModels at /home/pkgeval/.julia/packages/FixedEffectModels/xGOsh/src/FixedEffectModel.jl:58 overwritten in module MixedAnova at /home/pkgeval/.julia/packages/MixedAnova/wGwIh/src/FixedEffectModels/fit.jl:14. Simple linear regression: Error During Test at /home/pkgeval/.julia/packages/MixedAnova/wGwIh/test/runtests.jl:80 Got exception outside of a @test MethodError: no method matching StatsModels.ContrastsMatrix(::Matrix{Float64}, ::CategoricalVector{String, UInt8, String, CategoricalValue{String, UInt8}, Union{}}, ::Vector{CategoricalValue{String, UInt8}}, ::DummyCoding) The type `StatsModels.ContrastsMatrix` exists, but no method is defined for this combination of argument types when trying to construct it. Closest candidates are: StatsModels.ContrastsMatrix(::AbstractMatrix, !Matched::Vector{U}, ::Vector{T}, ::C) where {U, T, C<:AbstractContrasts} @ StatsModels ~/.julia/packages/StatsModels/fK0P3/src/contrasts.jl:110 StatsModels.ContrastsMatrix(!Matched::Grouping, ::AbstractVector) @ MixedModels ~/.julia/packages/MixedModels/ezbpk/src/grouping.jl:32 StatsModels.ContrastsMatrix(!Matched::StatsModels.FullDummyCoding, ::AbstractVector{T}) where T @ StatsModels ~/.julia/packages/StatsModels/fK0P3/src/contrasts.jl:283 ... Stacktrace: [1] StatsModels.ContrastsMatrix(contrasts::DummyCoding, levels::CategoricalVector{String, UInt8, String, CategoricalValue{String, UInt8}, Union{}}) @ StatsModels ~/.julia/packages/StatsModels/fK0P3/src/contrasts.jl:205 [2] concrete_term(t::Term, xs::CategoricalVector{String, UInt8, String, CategoricalValue{String, UInt8}, Union{}}, contrasts::DummyCoding) @ StatsModels ~/.julia/packages/StatsModels/fK0P3/src/schema.jl:212 [3] concrete_term(t::Term, xs::CategoricalVector{String, UInt8, String, CategoricalValue{String, UInt8}, Union{}}, ::Core.TypeEgal{CategoricalTerm}) @ StatsModels ~/.julia/packages/StatsModels/fK0P3/src/schema.jl:206 [inlined] [4] concrete_term(t::Term, xs::CategoricalVector{String, UInt8, String, CategoricalValue{String, UInt8}, Union{}}, ::Nothing) @ StatsModels ~/.julia/packages/StatsModels/fK0P3/src/schema.jl:205 [5] concrete_term(t::Term, dt::@NamedTuple{SepalLength::Vector{Float64}, SepalWidth::Vector{Float64}, Species::CategoricalVector{String, UInt8, String, CategoricalValue{String, UInt8}, Union{}}}, hints::Dict{Symbol, Any}) @ StatsModels ~/.julia/packages/StatsModels/fK0P3/src/schema.jl:184 [6] (::StatsModels.var"#schema##0#schema##1"{@NamedTuple{SepalLength::Vector{Float64}, SepalWidth::Vector{Float64}, Species::CategoricalVector{String, UInt8, String, CategoricalValue{String, UInt8}, Union{}}}, Dict{Symbol, Any}})(t::Term) @ StatsModels ~/.julia/packages/StatsModels/fK0P3/src/schema.jl:122 [7] iterate(g::Base.Generator{Vector{Term}, StatsModels.var"#schema##0#schema##1"{@NamedTuple{SepalLength::Vector{Float64}, SepalWidth::Vector{Float64}, Species::CategoricalVector{String, UInt8, String, CategoricalValue{String, UInt8}, Union{}}}, Dict{Symbol, Any}}}, s::Int64) @ Base generator.jl:49 [inlined] [8] Dict{Term, AbstractTerm}(kv::Base.Generator{Vector{Term}, StatsModels.var"#schema##0#schema##1"{@NamedTuple{SepalLength::Vector{Float64}, SepalWidth::Vector{Float64}, Species::CategoricalVector{String, UInt8, String, CategoricalValue{String, UInt8}, Union{}}}, Dict{Symbol, Any}}}) @ Base dict.jl:95 [9] StatsModels.Schema(x::Base.Generator{Vector{Term}, StatsModels.var"#schema##0#schema##1"{@NamedTuple{SepalLength::Vector{Float64}, SepalWidth::Vector{Float64}, Species::CategoricalVector{String, UInt8, String, CategoricalValue{String, UInt8}, Union{}}}, Dict{Symbol, Any}}}) @ StatsModels ~/.julia/packages/StatsModels/fK0P3/src/schema.jl:37 [inlined] [10] schema(ts::Vector{Term}, dt::@NamedTuple{SepalLength::Vector{Float64}, SepalWidth::Vector{Float64}, Species::CategoricalVector{String, UInt8, String, CategoricalValue{String, UInt8}, Union{}}}, hints::Dict{Symbol, Any}) @ StatsModels ~/.julia/packages/StatsModels/fK0P3/src/schema.jl:122 [inlined] [11] schema(f::FormulaTerm{Term, Tuple{Term, Term, InteractionTerm{Tuple{Term, Term}}}}, data::@NamedTuple{SepalLength::Vector{Float64}, SepalWidth::Vector{Float64}, Species::CategoricalVector{String, UInt8, String, CategoricalValue{String, UInt8}, Union{}}}, hints::Dict{Symbol, Any}) @ StatsModels ~/.julia/packages/StatsModels/fK0P3/src/schema.jl:126 [12] ModelFrame(f::FormulaTerm{Term, Tuple{Term, Term, InteractionTerm{Tuple{Term, Term}}}}, data::@NamedTuple{SepalLength::Vector{Float64}, SepalWidth::Vector{Float64}, PetalLength::Vector{Float64}, PetalWidth::Vector{Float64}, Species::CategoricalVector{String, UInt8, String, CategoricalValue{String, UInt8}, Union{}}}; model::Core.TypeEgal{LinearModel}, contrasts::Dict{Symbol, Any}) @ StatsModels ~/.julia/packages/StatsModels/fK0P3/src/modelframe.jl:83 [13] fit(::Core.TypeEgal{LinearModel}, f::FormulaTerm{Term, Tuple{Term, Term, InteractionTerm{Tuple{Term, Term}}}}, data::DataFrame, args::Nothing; contrasts::Dict{Symbol, Any}, kwargs::@Kwargs{dropcollinear::Bool}) @ StatsModels ~/.julia/packages/StatsModels/fK0P3/src/statsmodel.jl:85 [14] lm(X::FormulaTerm{Term, Tuple{Term, Term, InteractionTerm{Tuple{Term, Term}}}}, y::DataFrame, allowrankdeficient_dep::Nothing; kwargs::@Kwargs{dropcollinear::Bool}) @ GLM ~/.julia/packages/GLM/6ycOV/src/lm.jl:157 [inlined] [15] nestedmodels(::Type{LinearModel}, formula::FormulaTerm{Term, Tuple{Term, Term, InteractionTerm{Tuple{Term, Term}}}}, data::DataFrame; null::Bool, kwargs::@Kwargs{dropcollinear::Bool}) @ MixedAnova ~/.julia/packages/MixedAnova/wGwIh/src/GLM/fit.jl:314 [16] top-level scope @ ~/.julia/packages/MixedAnova/wGwIh/test/runtests.jl:80 [17] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2252 [inlined] [18] macro expansion @ ~/.julia/packages/MixedAnova/wGwIh/test/runtests.jl:81 [inlined] [19] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2252 [inlined] [20] macro expansion @ ~/.julia/packages/MixedAnova/wGwIh/test/runtests.jl:81 [inlined] Linear regression with frequency weights: Error During Test at /home/pkgeval/.julia/packages/MixedAnova/wGwIh/test/runtests.jl:110 Got exception outside of a @test MethodError: no method matching StatsModels.ContrastsMatrix(::Matrix{Float64}, ::CategoricalVector{Int64, UInt32, Int64, CategoricalValue{Int64, UInt32}, Union{}}, ::Vector{CategoricalValue{Int64, UInt32}}, ::DummyCoding) The type `StatsModels.ContrastsMatrix` exists, but no method is defined for this combination of argument types when trying to construct it. Closest candidates are: StatsModels.ContrastsMatrix(::AbstractMatrix, !Matched::Vector{U}, ::Vector{T}, ::C) where {U, T, C<:AbstractContrasts} @ StatsModels ~/.julia/packages/StatsModels/fK0P3/src/contrasts.jl:110 StatsModels.ContrastsMatrix(!Matched::Grouping, ::AbstractVector) @ MixedModels ~/.julia/packages/MixedModels/ezbpk/src/grouping.jl:32 StatsModels.ContrastsMatrix(!Matched::StatsModels.FullDummyCoding, ::AbstractVector{T}) where T @ StatsModels ~/.julia/packages/StatsModels/fK0P3/src/contrasts.jl:283 ... Stacktrace: [1] StatsModels.ContrastsMatrix(contrasts::DummyCoding, levels::CategoricalVector{Int64, UInt32, Int64, CategoricalValue{Int64, UInt32}, Union{}}) @ StatsModels ~/.julia/packages/StatsModels/fK0P3/src/contrasts.jl:205 [2] concrete_term(t::Term, xs::CategoricalVector{Int64, UInt32, Int64, CategoricalValue{Int64, UInt32}, Union{}}, contrasts::DummyCoding) @ StatsModels ~/.julia/packages/StatsModels/fK0P3/src/schema.jl:212 [3] concrete_term(t::Term, xs::CategoricalVector{Int64, UInt32, Int64, CategoricalValue{Int64, UInt32}, Union{}}, ::Core.TypeEgal{CategoricalTerm}) @ StatsModels ~/.julia/packages/StatsModels/fK0P3/src/schema.jl:206 [inlined] [4] concrete_term(t::Term, xs::CategoricalVector{Int64, UInt32, Int64, CategoricalValue{Int64, UInt32}, Union{}}, ::Nothing) @ StatsModels ~/.julia/packages/StatsModels/fK0P3/src/schema.jl:205 [5] concrete_term(t::Term, dt::@NamedTuple{Cost::Vector{Int64}, Claims::Vector{Int64}, Insured::Vector{Int64}, Merit::CategoricalVector{Int64, UInt32, Int64, CategoricalValue{Int64, UInt32}, Union{}}}, hints::Dict{Symbol, Any}) @ StatsModels ~/.julia/packages/StatsModels/fK0P3/src/schema.jl:184 [6] (::StatsModels.var"#schema##0#schema##1"{@NamedTuple{Cost::Vector{Int64}, Claims::Vector{Int64}, Insured::Vector{Int64}, Merit::CategoricalVector{Int64, UInt32, Int64, CategoricalValue{Int64, UInt32}, Union{}}}, Dict{Symbol, Any}})(t::Term) @ StatsModels ~/.julia/packages/StatsModels/fK0P3/src/schema.jl:122 [7] iterate(g::Base.Generator{Vector{Term}, StatsModels.var"#schema##0#schema##1"{@NamedTuple{Cost::Vector{Int64}, Claims::Vector{Int64}, Insured::Vector{Int64}, Merit::CategoricalVector{Int64, UInt32, Int64, CategoricalValue{Int64, UInt32}, Union{}}}, Dict{Symbol, Any}}}, s::Int64) @ Base generator.jl:49 [inlined] [8] Dict{Term, AbstractTerm}(kv::Base.Generator{Vector{Term}, StatsModels.var"#schema##0#schema##1"{@NamedTuple{Cost::Vector{Int64}, Claims::Vector{Int64}, Insured::Vector{Int64}, Merit::CategoricalVector{Int64, UInt32, Int64, CategoricalValue{Int64, UInt32}, Union{}}}, Dict{Symbol, Any}}}) @ Base dict.jl:95 [9] StatsModels.Schema(x::Base.Generator{Vector{Term}, StatsModels.var"#schema##0#schema##1"{@NamedTuple{Cost::Vector{Int64}, Claims::Vector{Int64}, Insured::Vector{Int64}, Merit::CategoricalVector{Int64, UInt32, Int64, CategoricalValue{Int64, UInt32}, Union{}}}, Dict{Symbol, Any}}}) @ StatsModels ~/.julia/packages/StatsModels/fK0P3/src/schema.jl:37 [inlined] [10] schema(ts::Vector{Term}, dt::@NamedTuple{Cost::Vector{Int64}, Claims::Vector{Int64}, Insured::Vector{Int64}, Merit::CategoricalVector{Int64, UInt32, Int64, CategoricalValue{Int64, UInt32}, Union{}}}, hints::Dict{Symbol, Any}) @ StatsModels ~/.julia/packages/StatsModels/fK0P3/src/schema.jl:122 [inlined] [11] schema(f::FormulaTerm{FunctionTerm{typeof(/), var"#18#19", (:Cost, :Claims)}, Tuple{Term, Term}}, data::@NamedTuple{Cost::Vector{Int64}, Claims::Vector{Int64}, Insured::Vector{Int64}, Merit::CategoricalVector{Int64, UInt32, Int64, CategoricalValue{Int64, UInt32}, Union{}}}, hints::Dict{Symbol, Any}) @ StatsModels ~/.julia/packages/StatsModels/fK0P3/src/schema.jl:126 [12] ModelFrame(f::FormulaTerm{FunctionTerm{typeof(/), var"#18#19", (:Cost, :Claims)}, Tuple{Term, Term}}, data::@NamedTuple{Merit::CategoricalVector{Int64, UInt32, Int64, CategoricalValue{Int64, UInt32}, Union{}}, Class::CategoricalVector{Int64, UInt32, Int64, CategoricalValue{Int64, UInt32}, Union{}}, Insured::Vector{Int64}, Premium::Vector{Int64}, Claims::Vector{Int64}, Cost::Vector{Int64}}; model::Core.TypeEgal{LinearModel}, contrasts::Dict{Symbol, Any}) @ StatsModels ~/.julia/packages/StatsModels/fK0P3/src/modelframe.jl:83 [13] fit(::Core.TypeEgal{LinearModel}, f::FormulaTerm{FunctionTerm{typeof(/), var"#18#19", (:Cost, :Claims)}, Tuple{Term, Term}}, data::DataFrame, args::Nothing; contrasts::Dict{Symbol, Any}, kwargs::@Kwargs{wts::Vector{Float64}}) @ StatsModels ~/.julia/packages/StatsModels/fK0P3/src/statsmodel.jl:85 [14] lm(X::FormulaTerm{FunctionTerm{typeof(/), var"#18#19", (:Cost, :Claims)}, Tuple{Term, Term}}, y::DataFrame, allowrankdeficient_dep::Nothing; kwargs::@Kwargs{wts::Vector{Float64}}) @ GLM ~/.julia/packages/GLM/6ycOV/src/lm.jl:157 [inlined] [15] nestedmodels(::Type{LinearModel}, formula::FormulaTerm{FunctionTerm{typeof(/), var"#18#19", (:Cost, :Claims)}, Tuple{Term, Term}}, data::DataFrame; null::Bool, kwargs::@Kwargs{wts::Vector{Float64}}) @ MixedAnova ~/.julia/packages/MixedAnova/wGwIh/src/GLM/fit.jl:314 [16] top-level scope @ ~/.julia/packages/MixedAnova/wGwIh/test/runtests.jl:80 [17] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2252 [inlined] [18] macro expansion @ ~/.julia/packages/MixedAnova/wGwIh/test/runtests.jl:111 [inlined] [19] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2252 [inlined] [20] macro expansion @ ~/.julia/packages/MixedAnova/wGwIh/test/runtests.jl:111 [inlined] Test Summary: | Error Total Time LinearModel | 2 2 36.6s Simple linear regression | 1 1 25.9s Linear regression with frequency weights | 1 1 10.6s RNG of the outermost testset: Random.Xoshiro(0x06f14d23ec64aee1, 0x0bca06c01b88a150, 0x6618109251b6ed75, 0x923c169f3578ce5b, 0x286c529a4ddeda97) ERROR: LoadError: Some tests did not pass: 0 passed, 0 failed, 2 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/MixedAnova/wGwIh/test/runtests.jl:79 Testing failed after 235.14s ERROR: LoadError: Package MixedAnova errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3298 [3] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:587 [4] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172 [5] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [6] test(pkg::String; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [inlined] [7] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:223 in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 PkgEval failed after 435.49s: package tests unexpectedly errored