Package evaluation to test ParameterEstimation on Julia 1.14.0-DEV.3141 (fbd24f51d0*) started at 2026-09-09T06:43:35.831 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 16.0s ################################################################################ # Installation # Installing ParameterEstimation... Resolving package versions... Updating `~/.julia/environments/v1.14/Project.toml` [b4cd1eb8] + ParameterEstimation v0.4.4 Updating `~/.julia/environments/v1.14/Manifest.toml` [47edcb42] + ADTypes v1.24.0 [14f7f29c] + AMD v0.5.4 ⌅ [c3fe647b] + AbstractAlgebra v0.44.13 [398f06c4] + AbstractLattices v0.3.1 [1520ce14] + AbstractTrees v0.4.5 [7d9f7c33] + Accessors v0.1.45 [79e6a3ab] + Adapt v4.7.0 [66dad0bd] + AliasTables v1.1.3 [a95523ee] + AlmostBlockDiagonals v0.1.10 ⌃ [fb37089c] + Arblib v1.4.1 [ec485272] + ArnoldiMethod v0.4.0 [4fba245c] + ArrayInterface v7.30.1 [4c555306] + ArrayLayouts v1.12.2 [a9b6321e] + Atomix v1.1.3 [aae01518] + BandedMatrices v1.12.0 [91aaffc3] + BaryRational v1.1.1 [e2ed5e7c] + Bijections v0.2.2 [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 [8e7c35d0] + BlockArrays v1.10.0 ⌃ [764a87c0] + BoundaryValueDiffEq v5.21.0 ⌃ [7227322d] + BoundaryValueDiffEqAscher v1.13.0 ⌃ [56b672f2] + BoundaryValueDiffEqCore v2.1.0 ⌃ [85d9eb09] + BoundaryValueDiffEqFIRK v1.12.0 ⌃ [1a22d4ce] + BoundaryValueDiffEqMIRK v1.12.0 ⌃ [9255f1d6] + BoundaryValueDiffEqMIRKN v1.13.0 ⌃ [ed55bfe0] + BoundaryValueDiffEqShooting v1.14.0 ⌃ [70df07ce] + BracketingNonlinearSolve v1.12.1 [fa961155] + CEnum v0.5.0 [2a0fbf3d] + CPUSummary v0.2.7 [082447d4] + ChainRules v1.73.0 [d360d2e6] + ChainRulesCore v1.26.1 [fb6a15b2] + CloseOpenIntervals v0.1.13 [08986516] + Collects v1.1.0 ⌅ [861a8166] + Combinatorics v1.0.2 [a80b9123] + CommonMark v1.0.4 [38540f10] + CommonSolve v0.2.14 [bbf7d656] + CommonSubexpressions v0.3.1 [f70d9fcc] + CommonWorldInvalidations v1.2.2 [34da2185] + Compat v4.18.1 [b152e2b5] + CompositeTypes v0.1.4 [a33af91c] + CompositionsBase v0.1.2 [2569d6c7] + ConcreteStructs v0.2.8 [187b0558] + ConstructionBase v1.6.0 [adafc99b] + CpuId v0.3.1 [a8cc5b0e] + Crayons v4.2.0 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.19.6 [e2d170a0] + DataValueInterfaces v1.0.0 [ab62b9b5] + DeepDiffs v1.2.0 ⌅ [bcd4f6db] + DelayDiffEq v5.73.0 [8bb1440f] + DelimitedFiles v1.9.1 ⌅ 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[bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.2+0 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.70.0+0 [3f19e933] + p7zip_jll v17.8.2+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Installation completed after 13.38s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompiling project... 36.7 s ✓ Nemo 4.4 s ✓ HCubature 24.2 s ✓ Arblib 12.4 s ✓ Distributions 0.2 s ✓ SymbolicUtils 5.3 s ✓ SciMLBase → SciMLBaseForwardDiffExt 10.6 s ✓ OptimizationBase 5.5 s ✓ BaryRational 9.4 s ✓ LinearSolve → LinearSolveBandedMatricesExt 20.6 s ✓ LinearSolve → LinearSolveSparseArraysExt 9.4 s ✓ LinearSolve → LinearSolveForwardDiffExt 12.7 s ✓ LinearSolve → LinearSolveFastAlmostBandedMatricesExt 5.5 s ✓ NonlinearSolveBase → NonlinearSolveBaseForwardDiffExt 8.6 s ✓ NonlinearSolveBase → NonlinearSolveBaseBandedMatricesExt 4.3 s ✓ BracketingNonlinearSolve → BracketingNonlinearSolveForwardDiffExt 5.1 s ✓ NonlinearSolveSpectralMethods → NonlinearSolveSpectralMethodsForwardDiffExt 11.5 s ✓ DiffEqBase → DiffEqBaseForwardDiffExt 7.3 s ✓ SteadyStateDiffEq 9.6 s ✓ JumpProcesses 106.4 s ✓ Groebner 3.0 s ✓ Distributions → DistributionsSparseConnectivityTracerExt 3.4 s ✓ Distributions → DistributionsTestExt 2.7 s ✓ SimpleRandom 4.3 s ✓ Distributions → DistributionsChainRulesCoreExt 4.0 s ✓ QuasiMonteCarlo → QuasiMonteCarloDistributionsExt 6.7 s ✓ SciMLBase → SciMLBaseDistributionsExt 0.1 s ✓ SymbolicLimits 5.9 s ✓ OptimizationBase → OptimizationChainRulesCoreExt 5.9 s ✓ LinearSolve → LinearSolveEnzymeExt 4.4 s ✓ BracketingNonlinearSolve → BracketingNonlinearSolveChainRulesCoreExt 20.3 s ✓ SimpleNonlinearSolve 7.5 s ✓ JumpProcesses → JumpProcessesOrdinaryDiffEqCoreExt 10.5 s ✓ Groebner → GroebnerDynamicPolynomialsExt 10.6 s ✓ ParamPunPam 6.6 s ✓ SimpleGraphs 4.2 s ✓ MonteCarloIntegration 9.7 s ✓ DiffEqNoiseProcess 51.7 s ✓ Symbolics 29.2 s ✓ NonlinearSolveQuasiNewton 26.5 s ✓ Sundials 51.5 s ✓ NonlinearSolveFirstOrder 11.3 s ✓ OrdinaryDiffEqDifferentiation 4.5 s ✓ SimpleNonlinearSolve → SimpleNonlinearSolveChainRulesCoreExt 14.9 s ✓ StructuralIdentifiability 36.9 s ✓ HomotopyContinuation 9.2 s ✓ Integrals 7.2 s ✓ DiffEqNoiseProcess → DiffEqNoiseProcessOptimExt 10.7 s ✓ StochasticDiffEqCore 19.6 s ✓ Symbolics → SymbolicsGroebnerExt 12.4 s ✓ Symbolics → SymbolicsForwardDiffExt [ Info: Assuming ((1//128)*(√((5120//1)*(a^4)) - (80//1)*(a^2))) != 0 [ Info: Assuming ((1//128)*(√((5120//1)*(a^4)) - (80//1)*(a^2))) != 0 111.8 s ✓ Symbolics → SymbolicsNemoExt 11.3 s ✓ DifferentiationInterface → DifferentiationInterfaceSymbolicsExt 22.4 s ✓ TaylorDiff 6.7 s ✓ NonlinearSolveQuasiNewton → NonlinearSolveQuasiNewtonForwardDiffExt 10.4 s ✓ ImplicitDiscreteSolve 8.2 s ✓ OrdinaryDiffEqDifferentiation → OrdinaryDiffEqDifferentiationSparseArraysExt 7.6 s ✓ Integrals → IntegralsFastGaussQuadratureExt 9.8 s ✓ Integrals → IntegralsArblibExt 7.7 s ✓ Integrals → IntegralsForwardDiffExt 7.7 s ✓ Integrals → IntegralsDifferentiationInterfaceExt 9.4 s ✓ StochasticDiffEqRODE 9.7 s ✓ StochasticDiffEqROCK 9.0 s ✓ StochasticDiffEqIIF 9.4 s ✓ StochasticDiffEqHighOrder 8.9 s ✓ StochasticDiffEqLowOrder 8.7 s ✓ StochasticDiffEqMilstein 10.6 s ✓ Symbolics → SymbolicsPreallocationToolsExt 19.4 s ✓ TaylorDiff → TaylorDiffSFExt 35.7 s ✓ NonlinearSolve 12.2 s ✓ OrdinaryDiffEqExtrapolation 33.1 s ✓ OrdinaryDiffEqRosenbrock 16.8 s ✓ OrdinaryDiffEqExponentialRK 15.8 s ✓ BoundaryValueDiffEqCore ┌ Warning: the bare singleton variant syntax `Inferred` is deprecated, write `Inferred()` instead (near /home/pkgeval/.julia/packages/ModelingToolkit/JvjlW/src/clock.jl:2) │ caller = ip:0x0 └ @ Core :-1 293.0 s ✓ ModelingToolkit 13.0 s ✓ NonlinearSolve → NonlinearSolveSundialsExt 15.7 s ✓ OrdinaryDiffEqNonlinearSolve 16.6 s ✓ BoundaryValueDiffEqAscher 144.1 s ✓ BoundaryValueDiffEqMIRK 182.3 s ✓ BoundaryValueDiffEqShooting 24.7 s ✓ BoundaryValueDiffEqMIRKN 252.3 s ✓ BoundaryValueDiffEqFIRK 44.4 s ✓ ModelingToolkit → MTKDeepDiffsExt 54.7 s ✓ StructuralIdentifiability → ModelingToolkitSIExt 15.3 s ✓ StochasticDiffEqLeaping 17.7 s ✓ StochasticDiffEqWeak 14.9 s ✓ OrdinaryDiffEqStabilizedIRK 15.8 s ✓ OrdinaryDiffEqPDIRK 39.2 s ✓ OrdinaryDiffEqSDIRK 59.6 s ✓ OrdinaryDiffEqFIRK 13.5 s ✓ OrdinaryDiffEqIMEXMultistep 15.5 s ✓ StochasticDiffEqImplicit 88.5 s ✓ BoundaryValueDiffEq 61.8 s ✓ SIAN 31.8 s ✓ OrdinaryDiffEqBDF 16.5 s ✓ StochasticDiffEq 65.6 s ✓ OrdinaryDiffEqDefault 18.0 s ✓ DelayDiffEq 28.3 s ✓ OrdinaryDiffEq ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile. --trace-compile is enabled during profile collection. ====================================================================================== cmd: /opt/julia/bin/julia 397 running 1 of 1 signal (10): User defined signal 1 var_occurs_inside at /source/src/subtype.c:4570:13 var_occurs_inside at /source/src/subtype.c:4555:13 var_occurs_invariant at /source/src/subtype.c:1564:12 [inlined] subtype_unionall at /source/src/subtype.c:1763:27 subtype at /source/src/subtype.c:2961:16 exists_subtype at /source/src/subtype.c:3339:13 [inlined] forall_exists_subtype at /source/src/subtype.c:3368:15 ijl_subtype_env at /source/src/subtype.c:3893:19 [inlined] ijl_subtype_env at /source/src/subtype.c:3857:18 subtype_tuple_tail at /source/src/subtype.c:2215:23 [inlined] subtype_tuple at /source/src/subtype.c:2302:15 [inlined] subtype at /source/src/subtype.c:3087:20 exists_subtype at /source/src/subtype.c:3339:13 [inlined] forall_exists_subtype at /source/src/subtype.c:3368:15 ijl_types_equal at /source/src/subtype.c:3993:23 [inlined] ijl_types_equal at /source/src/subtype.c:3923:18 jl_specializations_get_linfo_ at /source/src/gf.c:275:17 jl_restore_system_image_from_stream_ at /source/src/staticdata.c:4416:44 jl_restore_package_image_from_stream at /source/src/staticdata.c:4660:13 ijl_restore_incremental at /source/src/staticdata.c:4753:23 #_include_from_serialized#1052 at ./loading.jl:1484:0 (pc: 370) _include_from_serialized at ./loading.jl:1456:0 [inlined] #_require_search_from_serialized#1069 at ./loading.jl:2364:0 (pc: 3187) _require_search_from_serialized at ./loading.jl:2260:0 [inlined] __require_prelocked at ./loading.jl:2986:0 (pc: 70) _require_prelocked at ./loading.jl:2840:0 (pc: 47) macro expansion at ./loading.jl:2754:0 [inlined] macro expansion at ./lock.jl:435:0 [inlined] __require at ./loading.jl:2718:0 (pc: 241) jfptr___require_0.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4590:23 [inlined] ijl_apply_generic at /source/src/gf.c:4838:12 require at ./loading.jl:2694:0 [inlined] eval_import_path at ./module.jl:35:0 [inlined] eval_import_path_all at ./module.jl:59:0 (pc: 54) _eval_using at ./module.jl:136:0 [inlined] _eval_using at ./module.jl:136:0 (pc: 1) jfptr__eval_using_1.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4590:23 [inlined] ijl_apply_generic at /source/src/gf.c:4838:12 jl_apply at /source/src/julia.h:2538:12 [inlined] do_call at /source/src/interpreter.c:123:26 eval_value at /source/src/interpreter.c:259:16 eval_stmt_value at /source/src/interpreter.c:194:23 [inlined] eval_body at /source/src/interpreter.c:829:21 jl_interpret_toplevel_thunk at /source/src/interpreter.c:1052:21 ijl_eval_thunk at /source/src/toplevel.c:772:18 jl_toplevel_eval_flex at /source/src/toplevel.c:716:26 jl_eval_toplevel_stmts at /source/src/toplevel.c:601:15 jl_eval_module_expr at /source/src/toplevel.c:266:5 [inlined] jl_toplevel_eval_flex at /source/src/toplevel.c:669:27 jl_eval_toplevel_stmts at /source/src/toplevel.c:601:15 jl_toplevel_eval_flex at /source/src/toplevel.c:688:27 ijl_toplevel_eval at /source/src/toplevel.c:786:12 ijl_toplevel_eval_in at /source/src/toplevel.c:831:13 eval at ./boot.jl:618:0 (pc: 1) include_string at ./loading.jl:3291:0 (pc: 140) _jl_invoke at /source/src/gf.c:4590:23 [inlined] ijl_apply_generic at /source/src/gf.c:4838:12 _include at ./loading.jl:3353:0 (pc: 123) include at ./Base.jl:334:0 (pc: 1) include_package_for_output at ./loading.jl:3468:0 (pc: 489) jfptr_include_package_for_output_3.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4590:23 [inlined] ijl_apply_generic at /source/src/gf.c:4838:12 jl_apply at /source/src/julia.h:2538:12 [inlined] do_call at /source/src/interpreter.c:123:26 eval_value at /source/src/interpreter.c:259:16 eval_stmt_value at /source/src/interpreter.c:194:23 [inlined] eval_body at /source/src/interpreter.c:829:21 jl_interpret_toplevel_thunk at /source/src/interpreter.c:1052:21 ijl_eval_thunk at /source/src/toplevel.c:772:18 jl_toplevel_eval_flex at /source/src/toplevel.c:716:26 jl_eval_toplevel_stmts at /source/src/toplevel.c:601:15 jl_toplevel_eval_flex at /source/src/toplevel.c:688:27 ijl_toplevel_eval at /source/src/toplevel.c:786:12 ijl_toplevel_eval_in at /source/src/toplevel.c:831:13 eval at ./boot.jl:618:0 (pc: 1) include_string at ./loading.jl:3291:0 (pc: 140) include_string at ./loading.jl:3301:0 [inlined] __script_entry_include_string at ./client.jl:104:0 [inlined] exec_options at ./client.jl:382:0 (pc: 900) _start at ./client.jl:695:0 (pc: 217) jfptr__start_0.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4590:23 [inlined] ijl_apply_generic at /source/src/gf.c:4838:12 jl_apply at /source/src/julia.h:2538:12 [inlined] true_main at /source/src/jlapi.c:990:29 jl_repl_entrypoint at /source/src/jlapi.c:1157:15 main at /source/cli/loader_exe.c:117:15 unknown function (ip: 0x7290b8470249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point. Disabling --trace-compile ============================================================== │ exception = │ This interactive function requires a stdlib to be loaded, and package code should instead use it directly from that stdlib. │ Stacktrace: │ [1] error(s::String) │ @ Base error.jl:56 │ [2] require_stdlib(package_uuidkey::Base.PkgId, ext::Nothing, from::Module) │ @ Base loading.jl:3188 │ [3] macro expansion │ @ some.jl:157 [inlined] │ [4] profile_printing_listener(cond::Base.AsyncCondition) │ @ Base Base.jl:367 │ [5] (::Base.var"#start_profile_listener##0#start_profile_listener##1"{Base.AsyncCondition})() │ @ Base Base.jl:386 └ @ Base Base.jl:377 15207931946 deps_ns=15188820596 compilation_ns=161253634 methods=112 19.0 s ✓ DelayDiffEq → DelayDiffEqStochasticDiffEqCoreExt ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile. --trace-compile is enabled during profile collection. ====================================================================================== cmd: /opt/julia/bin/julia 7 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404:0 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430:0 ijl_task_get_next at /source/src/scheduler.c:573:34 wait at ./task.jl:1652:0 (pc: 108) wait_safe_interrupt at ./park.jl:231:0 (pc: 6) #wait#428 at ./condition.jl:390:0 (pc: 239) wait at ./condition.jl:325:0 (pc: 1) take_buffered at ./channels.jl:580:0 (pc: 83) #take!#650 at ./channels.jl:569:0 [inlined] take! at ./channels.jl:567:0 [inlined] #73 at ./precompilation.jl:2263:0 jfptr_YY.73_0.1 at /opt/julia/lib/julia/sys.so (unknown line) start_task at /source/src/task.c:1277:23 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point. Disabling --trace-compile ============================================================== Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x000076c738a49b10 Total snapshots: 160. Utilization: 0% ╎160 @Base/asyncevent.jl:429 (::Base.var"#735#736"{Base.Precompilation.var"… ╎ 160 @Base/asyncevent.jl:175 _trywait(t::Timer) ╎ 160 @Base/asyncevent.jl:175 _trywait(t::Timer; cancel::Base.UseDefaultTo… ╎ 160 @Base/asyncevent.jl:204 _trywait(t::Timer, tok::Nothing) ╎ 160 @Base/condition.jl:325 wait(c::Base.GenericCondition{Base.Threads.… ╎ 160 @Base/condition.jl:390 wait(c::Base.GenericCondition{Base.Threads… ╎ ╎ 160 @Base/park.jl:231 wait_safe_interrupt(ws::Tuple{Base.GenericCond… 159╎ ╎ 160 @Base/task.jl:? wait() ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile. --trace-compile is enabled during profile collection. ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404:0 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430:0 ijl_task_get_next at /source/src/scheduler.c:573:34 wait at ./task.jl:1652:0 (pc: 108) wait_forever at ./task.jl:1528:0 (pc: 4) jfptr_wait_forever_0.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4590:23 [inlined] ijl_apply_generic at /source/src/gf.c:4838:12 jl_apply at /source/src/julia.h:2538:12 [inlined] start_task at /source/src/task.c:1280:23 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point. Disabling --trace-compile ============================================================== Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x0000713c8b73ed10 Total snapshots: 400. Utilization: 0% ╎400 @Base/task.jl:1528 wait_forever() 399╎ 400 @Base/task.jl:? wait() [7] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/precompile.jl:34 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404:0 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430:0 ijl_task_get_next at /source/src/scheduler.c:573:34 wait at ./task.jl:1652:0 (pc: 108) wait_safe_interrupt at ./park.jl:231:0 (pc: 6) #wait#428 at ./condition.jl:390:0 (pc: 117) wait at ./condition.jl:325:0 [inlined] _trywait at ./asyncevent.jl:204:0 (pc: 38) #_trywait#727 at ./asyncevent.jl:175:0 [inlined] _trywait at ./asyncevent.jl:175:0 [inlined] #735 at ./asyncevent.jl:429:0 (pc: 23) jfptr_YY.735_2.1 at /opt/julia/lib/julia/sys.so (unknown line) start_task at /source/src/task.c:1277:23 unknown function (ip: (nil)) at (unknown file) Allocations: 23017324 (Pool: 23015613; Big: 1711); GC: 43 PkgEval terminated after 2765.26s: test duration exceeded the time limit