Package evaluation to test VCFTools on Julia 1.14.0-DEV.3128 (f573e2bf71*) started at 2026-09-06T20:55:35.728 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 16.14s ################################################################################ # Installation # Installing VCFTools... Resolving package versions... Updating `~/.julia/environments/v1.14/Project.toml` [a620830f] + VCFTools v0.2.10 Updating `~/.julia/environments/v1.14/Manifest.toml` [7d9f7c33] + Accessors v0.1.45 [66dad0bd] + AliasTables v1.1.3 [67c07d97] + Automa v1.2.0 [28d598bf] + BGZFStreams v0.3.2 [47718e42] + BioGenerics v0.1.5 [e1450e63] + BufferedStreams v1.2.2 [944b1d66] + CodecZlib v0.7.9 [861a8166] + Combinatorics v1.1.0 [38540f10] + CommonSolve v0.2.14 [a33af91c] + CompositionsBase v0.1.2 [187b0558] + ConstructionBase v1.6.0 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.19.6 [8bb1440f] + DelimitedFiles v1.9.1 [31c24e10] + Distributions v0.25.131 [ffbed154] + DocStringExtensions v0.9.5 [1a297f60] + FillArrays v1.17.0 [a0844989] + Gamma v1.2.0 [34004b35] + HypergeometricFunctions v0.3.30 ⌅ [09f84164] + HypothesisTests v0.11.8 [3587e190] + InverseFunctions v0.1.17 [92d709cd] + IrrationalConstants v0.2.6 [692b3bcd] + JLLWrappers v1.8.0 [2ab3a3ac] + LogExpFunctions v1.0.1 [1914dd2f] + MacroTools v0.5.16 [e1d29d7a] + Missings v1.2.0 [bac558e1] + OrderedCollections v2.0.1 [90014a1f] + PDMats v0.11.41 [aea7be01] + PrecompileTools v1.3.4 [21216c6a] + Preferences v1.5.2 [92933f4c] + ProgressMeter v1.11.0 [43287f4e] + PtrArrays v1.4.0 [1fd47b50] + QuadGK v2.11.3 [189a3867] + Reexport v1.2.2 [79098fc4] + Rmath v0.9.0 [f2b01f46] + Roots v3.0.8 [a2af1166] + SortingAlgorithms v1.2.3 [276daf66] + SpecialFunctions v2.9.0 [10745b16] + Statistics v1.11.5 [82ae8749] + StatsAPI v1.8.0 [2913bbd2] + StatsBase v0.34.13 [4c63d2b9] + StatsFuns v2.2.1 [3bb67fe8] + TranscodingStreams v0.11.3 [a620830f] + VCFTools v0.2.10 [28eba6e3] + VariantCallFormat v0.5.9 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.2+0 [56f22d72] + Artifacts v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.12.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.14.0 [a63ad114] + Mmap v1.11.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.13.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.5.7+0 [4536629a] + OpenBLAS_jll v0.3.34+0 [05823500] + OpenLibm_jll v0.8.8+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.2+0 [8e850b90] + libblastrampoline_jll v5.15.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 5.51s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompiling project... 5.8 s ✓ VCFTools 1 dependency successfully precompiled in 7 seconds. 115 already precompiled. Precompilation completed after 26.74s ################################################################################ # Testing # Testing VCFTools Status `/tmp/jl_zAM5BJ/Project.toml` [336ed68f] CSV v0.10.17 [944b1d66] CodecZlib v0.7.9 [a93c6f00] DataFrames v1.8.2 [8bb1440f] DelimitedFiles v1.9.1 [31c24e10] Distributions v0.25.131 ⌅ [09f84164] HypothesisTests v0.11.8 [92933f4c] ProgressMeter v1.11.0 [276daf66] SpecialFunctions v2.9.0 [2913bbd2] StatsBase v0.34.13 [a620830f] VCFTools v0.2.10 [28eba6e3] VariantCallFormat v0.5.9 [ade2ca70] Dates v1.11.0 [f43a241f] Downloads v1.7.0 [37e2e46d] LinearAlgebra v1.14.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_zAM5BJ/Manifest.toml` [7d9f7c33] Accessors v0.1.45 [66dad0bd] AliasTables v1.1.3 [67c07d97] Automa v1.2.0 [28d598bf] BGZFStreams v0.3.2 [47718e42] BioGenerics v0.1.5 [e1450e63] BufferedStreams v1.2.2 [336ed68f] CSV v0.10.17 [944b1d66] CodecZlib v0.7.9 [861a8166] Combinatorics v1.1.0 [38540f10] CommonSolve v0.2.14 [34da2185] Compat v4.18.1 [a33af91c] CompositionsBase v0.1.2 [187b0558] ConstructionBase v1.6.0 [a8cc5b0e] Crayons v4.2.0 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.8.2 [864edb3b] DataStructures v0.19.6 [e2d170a0] DataValueInterfaces v1.0.0 [8bb1440f] DelimitedFiles v1.9.1 [31c24e10] Distributions v0.25.131 [ffbed154] DocStringExtensions v0.9.5 [48062228] FilePathsBase v0.9.24 [1a297f60] FillArrays v1.17.0 [a0844989] Gamma v1.2.0 [34004b35] HypergeometricFunctions v0.3.30 ⌅ [09f84164] HypothesisTests v0.11.8 ⌅ [842dd82b] InlineStrings v1.4.6 [3587e190] InverseFunctions v0.1.17 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.6 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.8.0 [b964fa9f] LaTeXStrings v1.4.1 [2ab3a3ac] LogExpFunctions v1.0.1 [1914dd2f] MacroTools v0.5.16 [e1d29d7a] Missings v1.2.0 [bac558e1] OrderedCollections v2.0.1 [90014a1f] PDMats v0.11.41 ⌅ [69de0a69] Parsers v2.8.8 [2dfb63ee] PooledArrays v1.4.3 [aea7be01] PrecompileTools v1.3.4 [21216c6a] Preferences v1.5.2 [08abe8d2] PrettyTables v3.4.8 [92933f4c] ProgressMeter v1.11.0 [43287f4e] PtrArrays v1.4.0 [1fd47b50] QuadGK v2.11.3 [189a3867] Reexport v1.2.2 [79098fc4] Rmath v0.9.0 [f2b01f46] Roots v3.0.8 [91c51154] SentinelArrays v1.4.10 [a2af1166] SortingAlgorithms v1.2.3 [276daf66] SpecialFunctions v2.9.0 [10745b16] Statistics v1.11.5 [82ae8749] StatsAPI v1.8.0 [2913bbd2] StatsBase v0.34.13 [4c63d2b9] StatsFuns v2.2.1 ⌅ [892a3eda] StringManipulation v0.5.0 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.14.0 [3bb67fe8] TranscodingStreams v0.11.3 [a620830f] VCFTools v0.2.10 [28eba6e3] VariantCallFormat v0.5.9 [ea10d353] WeakRefStrings v1.4.3 [76eceee3] WorkerUtilities v1.6.1 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.2+0 [0dad84c5] ArgTools v1.2.0 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.12.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0 [b27032c2] LibCURL v1.0.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.14.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.13.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.13.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.5.7+0 [deac9b47] LibCURL_jll v8.21.0+0 [29816b5a] LibSSH2_jll v1.11.104+0 [14a3606d] MozillaCACerts_jll v2026.8.13 [4536629a] OpenBLAS_jll v0.3.34+0 [05823500] OpenLibm_jll v0.8.8+0 [458c3c95] OpenSSL_jll v3.5.8+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.2+0 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.70.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Test Summary: | Pass Total Time H-W test | 1 1 2.7s Test Summary: | Pass Total Time openvcf | 4 4 2.8s Test Summary: | Pass Total Time nrecords(vcf) | 1 1 3.1s Test Summary: | Pass Total Time nsamples(vcf) | 1 1 0.1s Test Summary: | Pass Total Time gtstats(record) | 4 4 4.4s ┌ Warning: accessing `Type.name` is deprecated without replacement. If for detection, use `Base.isType(x)`. │ caller = ProgressMeter.Progress(n::Int64, dt::Int64, desc::String, barlen::Nothing, color::Symbol, output::Base.PipeEndpoint; offset::Int64) at deprecated.jl:1 └ @ ProgressMeter ~/.julia/packages/ProgressMeter/N660J/src/deprecated.jl:1 ┌ Warning: `Progress(n::Integer, dt::Real, desc::AbstractString = "Progress: ", barlen = nothing, color::Symbol = :green, output::IO = stderr; offset::Integer = 0)` is deprecated, use `Progress(n; dt = dt, desc = desc, barlen = barlen, color = color, output = output, offset = offset)` instead. │ caller = ip:0x0 └ @ Core :-1 Progress: 0%| | ETA: 1:04:22 Progress: 100%|█████████████████████████████████████████| Time: 0:00:06 18.813445 seconds (6.88 M allocations: 464.892 MiB, 2.39% gc time, 94.97% compilation time: 4% of which was recompilation) 0.410349 seconds (1.36 M allocations: 110.972 MiB, 4.57% gc time, 30.11% compilation time) Progress: 0%| | ETA: 1:06:35 Progress: 100%|█████████████████████████████████████████| Time: 0:00:06 6.373112 seconds (2.28 M allocations: 170.890 MiB, 0.46% gc time, 92.58% compilation time) 0.434195 seconds (1.35 M allocations: 110.810 MiB, 3.29% gc time) Test Summary: | Pass Total Time gtstats(vcf) | 12 12 31.1s Test Summary: | Pass Total Time get sampleID | 4 4 0.1s Test Summary: | Pass Total Time Fishers exact HWE test | 20 20 0.1s Test Summary: | Pass Total Time filter_genotype(record) | 9 9 1.7s Test Summary: | Pass Total Time filter_genotype(file) | 4068 4068 2.0s Test Summary: | Pass Total Time flip_gt_allele | 4 4 1.0s Test Summary: | Pass Total Time match_gt_allele | 4 4 0.1s Test Summary: | Pass Total Time binomial_proportion_test | 2 2 1.2s [ Info: Scan IDs in reference panel Progress: 0%| | ETA: 0:15:55 Progress: 0%|▏ | ETA: 0:13:51 Progress: 0%|▏ | ETA: 0:13:30 Progress: 1%|▎ | ETA: 0:13:42 Progress: 1%|▎ | ETA: 0:13:22 Progress: 1%|▍ | ETA: 0:13:12 Progress: 1%|▍ | ETA: 0:13:22 Progress: 1%|▍ | ETA: 0:13:16 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Progress: 10%|████ | ETA: 0:11:38 Progress: 10%|████ | ETA: 0:11:38 Progress: 10%|████▏ | ETA: 0:11:37 Progress: 10%|████▏ | ETA: 0:11:35 Progress: 10%|████▎ | ETA: 0:11:35 Progress: 100%|█████████████████████████████████████████| Time: 0:01:20 [ Info: Match target IDs to reference IDs Progress: 0%| | ETA: 13:46:00 Progress: 33%|█████████████▋ | ETA: 0:02:30 Progress: 57%|███████████████████████▎ | ETA: 0:00:57 Progress: 82%|█████████████████████████████████▊ | ETA: 0:00:17 Progress: 100%|█████████████████████████████████████████| Time: 0:01:17 [ Info: 823 records are matched 168.335247 seconds (1.12 G allocations: 85.512 GiB, 8.50% gc time, 0.73% compilation time) [ Info: Scan IDs in reference panel Progress: 0%| | ETA: 0:13:54 Progress: 0%|▏ | ETA: 0:13:13 Progress: 0%|▏ | ETA: 0:13:00 Progress: 1%|▎ | ETA: 0:13:04 Progress: 1%|▎ | ETA: 0:12:56 Progress: 1%|▍ | ETA: 0:12:47 Progress: 1%|▍ | ETA: 0:12:52 Progress: 1%|▍ | ETA: 0:12:47 Progress: 1%|▌ | ETA: 0:12:44 Progress: 1%|▌ | ETA: 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10%|████▎ | ETA: 0:11:09 Progress: 100%|█████████████████████████████████████████| Time: 0:01:16 [ Info: Match target IDs to reference IDs Progress: 0%| | ETA: 13:56:19 Progress: 23%|█████████▍ | ETA: 0:04:16 Progress: 50%|████████████████████▋ | ETA: 0:01:15 Progress: 78%|███████████████████████████████▉ | ETA: 0:00:22 Progress: 100%|█████████████████████████████████████████| Time: 0:01:18 [ Info: 488 records are matched 165.670559 seconds (1.12 G allocations: 85.492 GiB, 8.35% gc time, 0.52% compilation time) [ Info: Scan IDs in reference panel Progress: 0%| | ETA: 0:12:28 Progress: 0%|▏ | ETA: 0:13:33 Progress: 0%|▏ | ETA: 0:13:11 Progress: 1%|▎ | ETA: 0:13:00 Progress: 1%|▎ | ETA: 0:13:05 Progress: 1%|▍ | ETA: 0:12:39 Progress: 1%|▍ | ETA: 0:12:19 Progress: 1%|▌ | ETA: 0:12:09 Progress: 1%|▌ | ETA: 0:11:56 Progress: 1%|▋ | ETA: 0:11:38 Progress: 2%|▋ | ETA: 0:11:19 Progress: 2%|▊ | ETA: 0:11:05 Progress: 2%|▉ | ETA: 0:11:09 Progress: 2%|▉ | ETA: 0:11:17 Progress: 2%|▉ | ETA: 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ETA: 0:11:25 Progress: 7%|██▊ | ETA: 0:11:25 Progress: 7%|██▉ | ETA: 0:11:24 Progress: 7%|██▉ | ETA: 0:11:24 Progress: 7%|███ | ETA: 0:11:24 Progress: 7%|███ | ETA: 0:11:23 Progress: 7%|███▏ | ETA: 0:11:23 Progress: 8%|███▏ | ETA: 0:11:21 Progress: 8%|███▏ | ETA: 0:11:21 Progress: 8%|███▎ | ETA: 0:11:20 Progress: 8%|███▎ | ETA: 0:11:18 Progress: 8%|███▍ | ETA: 0:11:19 Progress: 8%|███▍ | ETA: 0:11:18 Progress: 8%|███▌ | ETA: 0:11:17 Progress: 9%|███▌ | ETA: 0:11:19 Progress: 9%|███▋ | ETA: 0:11:19 Progress: 9%|███▋ | ETA: 0:11:18 Progress: 9%|███▋ | ETA: 0:11:17 Progress: 9%|███▊ | ETA: 0:11:17 Progress: 9%|███▊ | ETA: 0:11:13 Progress: 9%|███▉ | ETA: 0:11:09 Progress: 10%|████ | ETA: 0:11:08 Progress: 10%|████ | ETA: 0:11:05 Progress: 10%|████▏ | ETA: 0:11:03 Progress: 10%|████▏ | ETA: 0:11:03 Progress: 10%|████▏ | ETA: 0:11:02 Progress: 100%|█████████████████████████████████████████| Time: 0:01:16 [ Info: Match target IDs to reference IDs Progress: 0%| | ETA: 14:04:18 Progress: 28%|███████████▍ | ETA: 0:03:17 Progress: 58%|████████████████████████ | ETA: 0:00:55 Progress: 89%|████████████████████████████████████▍ | ETA: 0:00:10 Progress: 100%|█████████████████████████████████████████| Time: 0:01:18 [ Info: 0 records are matched 165.278738 seconds (1.12 G allocations: 85.492 GiB, 8.51% gc time, 0.53% compilation time) Test Summary: | Pass Total Time conformgt_by_id | 1649 1649 8m24.8s [ Info: Match target POS to reference POS Progress: 0%| | ETA: 14:20:55 Progress: 31%|████████████▊ | ETA: 0:02:51 Progress: 58%|███████████████████████▉ | ETA: 0:00:56 Progress: 84%|██████████████████████████████████▌ | ETA: 0:00:15 Progress: 100%|█████████████████████████████████████████| Time: 0:01:20 [ Info: 833 records are matched 90.505744 seconds (569.62 M allocations: 43.521 GiB, 8.09% gc time, 0.65% compilation time) [ Info: Match target POS to reference POS Progress: 0%| | ETA: 14:24:16 Progress: 24%|█████████▊ | ETA: 0:04:08 Progress: 47%|███████████████████▍ | ETA: 0:01:28 Progress: 73%|██████████████████████████████▏ | ETA: 0:00:29 Progress: 99%|████████████████████████████████████████▋| ETA: 0:00:01 Progress: 100%|█████████████████████████████████████████| Time: 0:01:20 [ Info: 493 records are matched 91.013519 seconds (569.61 M allocations: 43.521 GiB, 8.03% gc time, 0.65% compilation time) [ Info: Match target POS to reference POS Progress: 0%| | ETA: 14:10:24 Progress: 22%|█████████▏ | ETA: 0:04:28 Progress: 47%|███████████████████▎ | ETA: 0:01:27 Progress: 72%|█████████████████████████████▍ | ETA: 0:00:31 Progress: 99%|████████████████████████████████████████▍| ETA: 0:00:01 Progress: 100%|█████████████████████████████████████████| Time: 0:01:19 [ Info: 0 records are matched 89.765973 seconds (569.61 M allocations: 43.521 GiB, 8.01% gc time, 0.69% compilation time) Test Summary: | Pass Total Time conformgt_by_pos | 2502 2502 4m33.0s 1.232354 seconds (1.14 M allocations: 67.669 MiB, 1.51% gc time, 72.23% compilation time) 1.075070 seconds (1.04 M allocations: 64.273 MiB, 1.83% gc time, 67.64% compilation time) 1.081985 seconds (1.04 M allocations: 63.266 MiB, 71.34% compilation time) 0.306992 seconds (173.18 k allocations: 10.718 MiB, 99.93% compilation time) 0.013718 seconds (5.76 k allocations: 376.789 KiB, 95.60% compilation time) 0.011534 seconds (2.61 k allocations: 165.523 KiB, 95.16% compilation time) Test Summary: | Pass Total Time convert_gt(vcfile) | 11 11 9.2s 1.040679 seconds (934.45 k allocations: 56.376 MiB, 2.92% gc time, 66.48% compilation time) 0.892589 seconds (799.81 k allocations: 50.347 MiB, 64.27% compilation time) Test Summary: | Pass Total Time convert_ht(vcfile) | 6 6 6.2s Test Summary: | Pass Total Time convert_ds | 5 5 1.4s 0.159808 seconds (523.22 k allocations: 30.573 MiB, 15.07% compilation time) 0.636020 seconds (624.19 k allocations: 37.484 MiB, 76.71% compilation time) ┌ Warning: Reached end of reader; columns 1357-1400 are set to missing values └ @ VCFTools ~/.julia/packages/VCFTools/IWkMe/src/convert.jl:72 ┌ Warning: Reached end of reader; rows 1357-1400 are set to missing values └ @ VCFTools ~/.julia/packages/VCFTools/IWkMe/src/convert.jl:176 0.147978 seconds (520.01 k allocations: 32.143 MiB, 12.75% gc time) 0.479068 seconds (581.03 k allocations: 36.155 MiB, 73.34% compilation time) ┌ Warning: Reached end of record! Columns 1357-1400 are filled with 0.0s and are NOT haplotypes! └ @ VCFTools ~/.julia/packages/VCFTools/IWkMe/src/convert.jl:414 ┌ Warning: Reached end of record! Rows 1357-1400 are filled with 0.0s and are NOT haplotypes! └ @ VCFTools ~/.julia/packages/VCFTools/IWkMe/src/convert.jl:501 convert to transpose functions: Test Failed at /home/pkgeval/.julia/packages/VCFTools/IWkMe/test/convert_test.jl:119 Expression: all(out[1358:var"end", :] .== 0.0) Evaluated: all(Bool[0 0 … 1 1; 0 0 … 1 1; … ; 0 0 … 1 1; 0 0 … 1 1]) Stacktrace: [1] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:784 [inlined] [2] macro expansion @ ~/.julia/packages/VCFTools/IWkMe/test/convert_test.jl:119 [inlined] [3] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2247 [inlined] [4] top-level scope @ ~/.julia/packages/VCFTools/IWkMe/test/convert_test.jl:73 0.212921 seconds (1.30 M allocations: 54.160 MiB, 13.20% gc time, 4.51% compilation time) 0.870029 seconds (1.41 M allocations: 61.871 MiB, 15.56% gc time, 65.01% compilation time) ┌ Warning: Reached end of reader; columns 1357-1400 are set to missing values └ @ VCFTools ~/.julia/packages/VCFTools/IWkMe/src/convert.jl:672 ┌ Warning: Reached end of reader; rows 1357-1400 are set to missing values └ @ VCFTools ~/.julia/packages/VCFTools/IWkMe/src/convert.jl:787 Test Summary: | Pass Fail Total Time convert to transpose functions | 12 1 13 19.4s RNG of the outermost testset: Xoshiro(0xa121c0a0c17bd820, 0xa7b07b9caf856f95, 0xcfad4128527e85c0, 0x592f50cf69c93457, 0x16e0aeec51053200) ERROR: LoadError: Some tests did not pass: 12 passed, 1 failed, 0 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/VCFTools/IWkMe/test/convert_test.jl:72 in expression starting at /home/pkgeval/.julia/packages/VCFTools/IWkMe/test/runtests.jl:17 Testing failed after 901.88s ERROR: LoadError: Package VCFTools errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3298 [3] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:587 [4] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172 [5] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [6] test(pkg::String; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [inlined] [7] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:223 in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 PkgEval failed after 989.59s: package has test failures