Package evaluation to test PyCallJLD on Julia 1.14.0-DEV.3128 (f573e2bf71*) started at 2026-09-06T21:22:15.280 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 17.39s ################################################################################ # Installation # Installing PyCallJLD... Resolving package versions... Installed libaec_jll ──────────── v1.1.7+0 Installed Statistics ──────────── v1.11.5 Installed DelimitedFiles ──────── v1.9.1 Installed MicrosoftMPI_jll ────── v10.1.4+3 (no artifacts on this platform) Installed Lz4_jll ─────────────── v1.10.1+0 Installed MPICH_jll ───────────── v4.3.2+0 Installed VersionParsing ──────── v1.3.0 Installed MacroTools ──────────── v0.5.16 Installed Blosc ───────────────── v0.7.3 Installed PrecompileTools ─────── v1.3.4 Installed Compat ──────────────── v3.47.0 Installed StructUtils ─────────── v2.8.5 Installed FileIO ──────────────── v1.20.0 Installed Xorg_libpciaccess_jll ─ v0.19.0+0 Installed Blosc_jll ───────────── v1.21.7+0 Installed Conda ───────────────── v1.10.3 Installed PyCall ──────────────── v1.96.4 Installed Requires ────────────── v1.3.1 Installed JLD ─────────────────── v0.12.5 Installed HDF5_jll ────────────── v1.14.6+0 Installed Hwloc_jll ───────────── v2.14.0+0 Installed Parsers ─────────────── v3.0.0 Installed JSON ────────────────── v1.8.0 Installed OpenMPI_jll ─────────── v5.0.11+0 Installed HDF5 ────────────────── v0.14.1 Installed Preferences ─────────── v1.5.2 Installed XML2_jll ────────────── v2.13.9+0 Installed JLLWrappers ─────────── v1.8.0 Installed MPIPreferences ──────── v0.1.12 Installed MPItrampoline_jll ───── v5.5.6+0 Installed Libiconv_jll ────────── v1.18.0+0 Installed PyCallJLD ───────────── v0.2.1 Installing 9 artifacts Installed artifact libaec 31.0 KiB Installed artifact Xorg_libpciaccess 23.4 KiB Installed artifact Blosc 40.2 KiB Installed artifact Hwloc 3.0 MiB Installed artifact Lz4 138.3 KiB Installed artifact XML2 2.0 MiB Installed artifact MPICH 2.3 MiB Installed artifact Libiconv 1022.9 KiB Installed artifact HDF5 4.8 MiB Updating `~/.julia/environments/v1.14/Project.toml` [de320387] + PyCallJLD v0.2.1 Updating `~/.julia/environments/v1.14/Manifest.toml` [a74b3585] + Blosc v0.7.3 ⌅ [34da2185] + Compat v3.47.0 [8f4d0f93] + Conda v1.10.3 [8bb1440f] + DelimitedFiles v1.9.1 [5789e2e9] + FileIO v1.20.0 ⌅ [f67ccb44] + HDF5 v0.14.1 ⌅ [4138dd39] + JLD v0.12.5 [692b3bcd] + JLLWrappers v1.8.0 [682c06a0] + JSON v1.8.0 [3da0fdf6] + MPIPreferences v0.1.12 [1914dd2f] + MacroTools v0.5.16 [69de0a69] + Parsers v3.0.0 [aea7be01] + PrecompileTools v1.3.4 [21216c6a] + Preferences v1.5.2 [438e738f] + PyCall v1.96.4 [de320387] + PyCallJLD v0.2.1 [ae029012] + Requires v1.3.1 [10745b16] + Statistics v1.11.5 [ec057cc2] + StructUtils v2.8.5 [81def892] + VersionParsing v1.3.0 [0b7ba130] + Blosc_jll v1.21.7+0 ⌅ [0234f1f7] + HDF5_jll v1.14.6+0 [e33a78d0] + Hwloc_jll v2.14.0+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [5ced341a] + Lz4_jll v1.10.1+0 ⌅ [7cb0a576] + MPICH_jll v4.3.2+0 [f1f71cc9] + MPItrampoline_jll v5.5.6+0 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 [fe0851c0] + OpenMPI_jll v5.0.11+0 ⌅ [02c8fc9c] + XML2_jll v2.13.9+0 [a65dc6b1] + Xorg_libpciaccess_jll v0.19.0+0 [477f73a3] + libaec_jll v1.1.7+0 [0dad84c5] + ArgTools v1.2.0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.12.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v1.0.0 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.14.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.14.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.13.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.13.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.5.7+0 [deac9b47] + LibCURL_jll v8.21.0+0 [e37daf67] + LibGit2_jll v1.9.7+0 [29816b5a] + LibSSH2_jll v1.11.104+0 [14a3606d] + MozillaCACerts_jll v2026.8.13 [4536629a] + OpenBLAS_jll v0.3.34+0 [458c3c95] + OpenSSL_jll v3.5.8+0 [efcefdf7] + PCRE2_jll v10.48.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.2+0 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.70.0+0 [3f19e933] + p7zip_jll v17.8.2+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Building Conda ─→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/8f06b0cfa4c514c7b9546756dbae91fcfbc92dc9/build.log` Building PyCall → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/9816a3826b0ebf49ab4926e2b18842ad8b5c8f04/build.log` Building HDF5 ──→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/96d77533eb46e208e801b939db8a27626c166565/build.log` Installation completed after 128.6s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling project... 5.1 s ✓ TestEnv 1 dependency successfully precompiled in 5 seconds. 27 already precompiled. Precompiling package dependencies... Precompiling project... 4.1 s ✓ MacroTools 0.9 s ✓ Statistics 0.5 s ✓ VersionParsing 0.9 s ✓ Requires 0.8 s ✓ DelimitedFiles 2.0 s ✓ StructUtils 1.4 s ✓ Preferences 1.7 s ✓ Statistics → SparseArraysExt 7.3 s ✓ FileIO 1.5 s ✓ JLLWrappers 1.7 s ✓ MPIPreferences 1.0 s ✓ PrecompileTools 8.7 s ✓ Compat 1.4 s ✓ libaec_jll 1.4 s ✓ Xorg_libpciaccess_jll 1.2 s ✓ Libiconv_jll 1.3 s ✓ Lz4_jll 0.9 s ✓ MicrosoftMPI_jll 4.7 s ✓ MPItrampoline_jll 29.5 s ✓ Parsers 1.2 s ✓ XML2_jll 1.2 s ✓ Blosc_jll 14.9 s ✓ JSON 1.7 s ✓ Hwloc_jll 1.1 s ✓ Blosc 2.2 s ✓ Conda 4.7 s ✓ MPICH_jll 3.9 s ✓ OpenMPI_jll 10.4 s ✓ PyCall 4.7 s ✓ HDF5_jll WARNING: Constructor for type "Array" was extended in `HDF5` without explicit qualification or import. NOTE: Assumed "Array" refers to `Base.Array`. This behavior is deprecated and may differ in future versions. NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function Array end`. Hint: To silence the warning, qualify `Array` as `Base.Array` in the method signature or explicitly `import Base: Array`. 9.1 s ✓ HDF5 10.0 s ✓ JLD 12.8 s ✓ PyCallJLD 33 dependencies successfully precompiled in 151 seconds. 38 already precompiled. 1 dependency had output during precompilation: ┌ HDF5 │ WARNING: Constructor for type "Array" was extended in `HDF5` without explicit qualification or import. │ NOTE: Assumed "Array" refers to `Base.Array`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Array end`. │ Hint: To silence the warning, qualify `Array` as `Base.Array` in the method signature or explicitly `import Base: Array`. └ Precompilation completed after 180.16s ################################################################################ # Testing # Testing PyCallJLD Status `/tmp/jl_0VxALl/Project.toml` ⌅ [4138dd39] JLD v0.12.5 [438e738f] PyCall v1.96.4 [de320387] PyCallJLD v0.2.1 [8dfed614] Test v1.11.0 Status `/tmp/jl_0VxALl/Manifest.toml` [a74b3585] Blosc v0.7.3 ⌅ [34da2185] Compat v3.47.0 [8f4d0f93] Conda v1.10.3 [8bb1440f] DelimitedFiles v1.9.1 [5789e2e9] FileIO v1.20.0 ⌅ [f67ccb44] HDF5 v0.14.1 ⌅ [4138dd39] JLD v0.12.5 [692b3bcd] JLLWrappers v1.8.0 [682c06a0] JSON v1.8.0 [3da0fdf6] MPIPreferences v0.1.12 [1914dd2f] MacroTools v0.5.16 [69de0a69] Parsers v3.0.0 [aea7be01] PrecompileTools v1.3.4 [21216c6a] Preferences v1.5.2 [438e738f] PyCall v1.96.4 [de320387] PyCallJLD v0.2.1 [ae029012] Requires v1.3.1 [10745b16] Statistics v1.11.5 [ec057cc2] StructUtils v2.8.5 [81def892] VersionParsing v1.3.0 [0b7ba130] Blosc_jll v1.21.7+0 ⌅ [0234f1f7] HDF5_jll v1.14.6+0 [e33a78d0] Hwloc_jll v2.14.0+0 [94ce4f54] Libiconv_jll v1.18.0+0 [5ced341a] Lz4_jll v1.10.1+0 ⌅ [7cb0a576] MPICH_jll v4.3.2+0 [f1f71cc9] MPItrampoline_jll v5.5.6+0 [9237b28f] MicrosoftMPI_jll v10.1.4+3 [fe0851c0] OpenMPI_jll v5.0.11+0 ⌅ [02c8fc9c] XML2_jll v2.13.9+0 [a65dc6b1] Xorg_libpciaccess_jll v0.19.0+0 [477f73a3] libaec_jll v1.1.7+0 [0dad84c5] ArgTools v1.2.0 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.12.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v1.0.0 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.14.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.14.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.13.0 [9e88b42a] Serialization v1.11.0 [1a1011a3] SharedArrays v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.13.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.5.7+0 [deac9b47] LibCURL_jll v8.21.0+0 [e37daf67] LibGit2_jll v1.9.7+0 [29816b5a] LibSSH2_jll v1.11.104+0 [14a3606d] MozillaCACerts_jll v2026.8.13 [4536629a] OpenBLAS_jll v0.3.34+0 [458c3c95] OpenSSL_jll v3.5.8+0 [efcefdf7] PCRE2_jll v10.48.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.2+0 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.70.0+0 [3f19e933] p7zip_jll v17.8.2+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... ┌ Warning: `disable_sigint` no longer defers Ctrl-C: SIGINT is delivered as a cancellation of the current ^C scope and observed at cancellation points regardless of the sigatomic region this establishes. Shield a region from cancellation by scoping `Base.CANCEL_TOKEN => nothing` over it instead. │ caller = pyeval_(s::String, globals::PyCall.PyDict{String, PyCall.PyObject, true}, locals::PyCall.PyDict{String, PyCall.PyObject, true}, input_type::Int64, fname::String) at pyeval.jl:37 └ @ PyCall ~/.julia/packages/PyCall/1gn3u/src/pyeval.jl:37 ┌ Warning: `disable_sigint` no longer defers Ctrl-C: SIGINT is delivered as a cancellation of the current ^C scope and observed at cancellation points regardless of the sigatomic region this establishes. Shield a region from cancellation by scoping `Base.CANCEL_TOKEN => nothing` over it instead. │ caller = __pycall!(ret::PyObject, pyargsptr::Ptr{PyCall.PyObject_struct}, o::PyObject, kw::Ptr{Nothing}) at pyfncall.jl:42 [inlined] └ @ PyCall ~/.julia/packages/PyCall/1gn3u/src/pyfncall.jl:42 ┌ Warning: `disable_sigint` no longer defers Ctrl-C: SIGINT is delivered as a cancellation of the current ^C scope and observed at cancellation points regardless of the sigatomic region this establishes. Shield a region from cancellation by scoping `Base.CANCEL_TOKEN => nothing` over it instead. │ caller = __pycall!(ret::PyObject, pyargsptr::Ptr{PyCall.PyObject_struct}, o::PyObject, kw::Ptr{Nothing}) at pyfncall.jl:42 [inlined] └ @ PyCall ~/.julia/packages/PyCall/1gn3u/src/pyfncall.jl:42 Error encountered while save FileIO.File{FileIO.DataFormat{:JLD}, String}("/tmp/temp.jld"). Fatal error: ERROR: LoadError: FieldError: type DataType has no field `size`, available fields: `name`, `super`, `parameters`, `types`, `instance`, `layout`, `hash`, `flags` Stacktrace: [1] getproperty(T::Core.TypeEgal{PyObject}, s::Symbol) @ Base operators.jl:100 [2] h5fieldtype(parent::JLD.JldFile, T::Core.TypeEgal{PyObject}, commit::Bool) @ JLD ~/.julia/packages/JLD/9wjVw/src/jld_types.jl:313 [3] _write(parent::JLD.JldFile, path::String, data::Vector{PyObject}, wsession::JLD.JldWriteSession; kargs::@Kwargs{}) @ JLD ~/.julia/packages/JLD/9wjVw/src/JLD.jl:593 [4] _write(parent::JLD.JldFile, path::String, data::Vector{PyObject}, wsession::JLD.JldWriteSession) @ JLD ~/.julia/packages/JLD/9wjVw/src/JLD.jl:589 [5] write(parent::JLD.JldFile, name::String, data::Vector{PyObject}, wsession::JLD.JldWriteSession; kargs::@Kwargs{}) @ JLD ~/.julia/packages/JLD/9wjVw/src/JLD.jl:542 [6] (::JLD.var"#37#38"{String, Vector{PyObject}, Tuple{}})(file::JLD.JldFile) @ JLD ~/.julia/packages/JLD/9wjVw/src/JLD.jl:1261 [7] jldopen(::JLD.var"#37#38"{String, Vector{PyObject}, Tuple{}}, ::String, ::Vararg{String}; kws::@Kwargs{compatible::Bool, compress::Bool}) @ JLD ~/.julia/packages/JLD/9wjVw/src/JLD.jl:262 [8] fileio_save(::FileIO.File{FileIO.DataFormat{:JLD}, String}, ::String, ::Vector{PyObject}; compatible::Bool, compress::Bool) @ JLD ~/.julia/packages/JLD/9wjVw/src/JLD.jl:1259 [9] fileio_save(::FileIO.File{FileIO.DataFormat{:JLD}, String}, ::String, ::Vector{PyObject}) @ JLD ~/.julia/packages/JLD/9wjVw/src/JLD.jl:1255 [10] action(::Symbol, ::Vector{Union{Base.PkgId, Module}}, ::FileIO.Formatted, ::String, ::Vararg{Any}; options::@Kwargs{}) @ FileIO ~/.julia/packages/FileIO/pFGbU/src/loadsave.jl:219 [11] action(::Symbol, ::Vector{Union{Base.PkgId, Module}}, ::FileIO.File{FileIO.DataFormat{_A}, String} where _A, ::String, ::Vector{PyObject}) @ FileIO ~/.julia/packages/FileIO/pFGbU/src/loadsave.jl:196 [inlined] [12] action(::Symbol, ::Vector{Union{Base.PkgId, Module}}, ::Symbol, ::String, ::String, ::Vector{PyObject}; options::@Kwargs{}) @ FileIO ~/.julia/packages/FileIO/pFGbU/src/loadsave.jl:185 [inlined] [13] save(::String, ::String, ::Vector{PyObject}; options::@Kwargs{}) @ FileIO ~/.julia/packages/FileIO/pFGbU/src/loadsave.jl:129 [inlined] [14] save(::String, ::String, ::Vector{PyObject}) @ FileIO ~/.julia/packages/FileIO/pFGbU/src/loadsave.jl:125 [15] top-level scope @ ~/.julia/packages/PyCallJLD/ZrHbU/test/runtests.jl:10 [16] include(mapexpr::Function, mod::Module, _path::String) @ Base Base.jl:335 [17] top-level scope @ none:6 [18] eval(m::Module, e::Any) @ Core boot.jl:618 [19] __script_entry_eval(mod::Module, ex::Any) @ Base client.jl:106 [inlined] [20] exec_options(opts::Base.JLOptions) @ Base client.jl:350 [21] _start() @ Base client.jl:695 Stacktrace: [1] handle_error(e::FieldError, q::Base.PkgId, bt::Vector{Union{Ptr{Nothing}, Base.InterpreterIP}}) @ FileIO ~/.julia/packages/FileIO/pFGbU/src/error_handling.jl:73 [2] handle_exceptions(exceptions::Vector{Tuple{Any, Union{Base.PkgId, Module}, Vector}}, action::String) @ FileIO ~/.julia/packages/FileIO/pFGbU/src/error_handling.jl:66 [3] action(::Symbol, ::Vector{Union{Base.PkgId, Module}}, ::FileIO.Formatted, ::String, ::Vararg{Any}; options::@Kwargs{}) @ FileIO ~/.julia/packages/FileIO/pFGbU/src/loadsave.jl:228 [4] action(::Symbol, ::Vector{Union{Base.PkgId, Module}}, ::FileIO.File{FileIO.DataFormat{_A}, String} where _A, ::String, ::Vector{PyObject}) @ FileIO ~/.julia/packages/FileIO/pFGbU/src/loadsave.jl:196 [inlined] [5] action(::Symbol, ::Vector{Union{Base.PkgId, Module}}, ::Symbol, ::String, ::String, ::Vector{PyObject}; options::@Kwargs{}) @ FileIO ~/.julia/packages/FileIO/pFGbU/src/loadsave.jl:185 [inlined] [6] save(::String, ::String, ::Vector{PyObject}; options::@Kwargs{}) @ FileIO ~/.julia/packages/FileIO/pFGbU/src/loadsave.jl:129 [inlined] [7] save(::String, ::String, ::Vector{PyObject}) @ FileIO ~/.julia/packages/FileIO/pFGbU/src/loadsave.jl:125 [8] top-level scope @ ~/.julia/packages/PyCallJLD/ZrHbU/test/runtests.jl:10 [9] include(mapexpr::Function, mod::Module, _path::String) @ Base Base.jl:335 [10] top-level scope @ none:6 in expression starting at /home/pkgeval/.julia/packages/PyCallJLD/ZrHbU/test/runtests.jl:8 Testing failed after 69.14s ERROR: LoadError: Package PyCallJLD errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3298 [3] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:587 [4] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172 [5] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [6] test(pkg::String; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [inlined] [7] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:223 in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 PkgEval failed after 444.59s: package tests unexpectedly errored