Package evaluation to test RheaReactions on Julia 1.14.0-DEV.3106 (9d314127b9*) started at 2026-09-03T16:05:43.937 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 16.2s ################################################################################ # Installation # Installing RheaReactions... Resolving package versions... Updating `~/.julia/environments/v1.14/Project.toml` [e7041bdd] + RheaReactions v0.8.5 Updating `~/.julia/environments/v1.14/Manifest.toml` [944b1d66] + CodecZlib v0.7.9 [ffbed154] + DocStringExtensions v0.9.5 [4e289a0a] + EnumX v1.0.7 [cd3eb016] + HTTP v2.6.7 [682c06a0] + JSON v1.7.1 ⌅ [69de0a69] + Parsers v2.8.7 [aea7be01] + PrecompileTools v1.3.4 [21216c6a] + Preferences v1.5.2 [802f3686] + Reseau v1.4.1 [e7041bdd] + RheaReactions v0.8.5 [6c6a2e73] + Scratch v1.3.0 [ec057cc2] + StructUtils v2.8.5 [3bb67fe8] + TranscodingStreams v0.11.3 [5c2747f8] + URIs v1.7.0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8f399da3] + Libdl v1.11.0 [56ddb016] + Logging v1.11.0 [ca575930] + NetworkOptions v1.3.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.13.0 [9e88b42a] + Serialization v1.11.0 [fa267f1f] + TOML v1.0.3 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [458c3c95] + OpenSSL_jll v3.5.8+0 [83775a58] + Zlib_jll v1.3.2+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 3.92s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompiling project... 41.3 s ✓ Reseau 107.6 s ✓ HTTP 3.0 s ✓ RheaReactions 3 dependencies successfully precompiled in 152 seconds. 27 already precompiled. Precompilation completed after 169.68s ################################################################################ # Testing # Testing RheaReactions Status `/tmp/jl_PtJZrl/Project.toml` [ffbed154] DocStringExtensions v0.9.5 [cd3eb016] HTTP v2.6.7 [682c06a0] JSON v1.7.1 [e7041bdd] RheaReactions v0.8.5 [6c6a2e73] Scratch v1.3.0 [9e88b42a] Serialization v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_PtJZrl/Manifest.toml` [944b1d66] CodecZlib v0.7.9 [ffbed154] DocStringExtensions v0.9.5 [4e289a0a] EnumX v1.0.7 [cd3eb016] HTTP v2.6.7 [682c06a0] JSON v1.7.1 ⌅ [69de0a69] Parsers v2.8.7 [aea7be01] PrecompileTools v1.3.4 [21216c6a] Preferences v1.5.2 [802f3686] Reseau v1.4.1 [e7041bdd] RheaReactions v0.8.5 [6c6a2e73] Scratch v1.3.0 [ec057cc2] StructUtils v2.8.5 [3bb67fe8] TranscodingStreams v0.11.3 [5c2747f8] URIs v1.7.0 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0 [8f399da3] Libdl v1.11.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [ca575930] NetworkOptions v1.3.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.13.0 [9e88b42a] Serialization v1.11.0 [f489334b] StyledStrings v1.13.0 [fa267f1f] TOML v1.0.3 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [458c3c95] OpenSSL_jll v3.5.8+0 [83775a58] Zlib_jll v1.3.2+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... [ Info: Cache cleared Metabolites: Test Failed at /home/pkgeval/.julia/packages/RheaReactions/vo7it/test/reactions.jl:85 Expression: fe2.inchi == "InChI=1S/Fe/q+2" Evaluated: nothing == "InChI=1S/Fe/q+2" Stacktrace: [1] top-level scope @ ~/.julia/packages/RheaReactions/vo7it/test/reactions.jl:80 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2247 [inlined] [3] macro expansion @ ~/.julia/packages/RheaReactions/vo7it/test/reactions.jl:85 [inlined] [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:784 [inlined] Metabolites: Test Failed at /home/pkgeval/.julia/packages/RheaReactions/vo7it/test/reactions.jl:86 Expression: fe2.inchikey == "CWYNVVGOOAEACU-UHFFFAOYSA-N" Evaluated: nothing == "CWYNVVGOOAEACU-UHFFFAOYSA-N" Stacktrace: [1] top-level scope @ ~/.julia/packages/RheaReactions/vo7it/test/reactions.jl:80 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2247 [inlined] [3] macro expansion @ ~/.julia/packages/RheaReactions/vo7it/test/reactions.jl:86 [inlined] [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:784 [inlined] Metabolites: Test Failed at /home/pkgeval/.julia/packages/RheaReactions/vo7it/test/reactions.jl:87 Expression: fe2.smiles == "[Fe++]" Evaluated: nothing == "[Fe++]" Stacktrace: [1] top-level scope @ ~/.julia/packages/RheaReactions/vo7it/test/reactions.jl:80 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2247 [inlined] [3] macro expansion @ ~/.julia/packages/RheaReactions/vo7it/test/reactions.jl:87 [inlined] [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:784 [inlined] Test Summary: | Pass Fail Total Time RheaReactions.jl | 26 3 29 2m18.3s Reactions | 20 20 2m03.5s Metabolites | 6 3 9 12.8s RNG of the outermost testset: Random.Xoshiro(0x02044256bf395785, 0x330f758fd3911f71, 0xe17f7b8bc51ad6d1, 0x6ff82473e18c66d4, 0x12790bec3e49b7b9) ERROR: LoadError: Some tests did not pass: 26 passed, 3 failed, 0 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/RheaReactions/vo7it/test/runtests.jl:4 Testing failed after 157.26s ERROR: LoadError: Package RheaReactions errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3298 [3] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:587 [4] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172 [5] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [6] test(pkg::String; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [inlined] [7] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:223 in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 PkgEval failed after 380.98s: package has test failures