Package evaluation to test MixedModels on Julia 1.14.0-DEV.3071 (c76331c927*) started at 2026-09-02T07:25:14.231 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 15.49s ################################################################################ # Installation # Installing MixedModels... Resolving package versions... Updating `~/.julia/environments/v1.14/Project.toml` [ff71e718] + MixedModels v5.9.0 Updating `~/.julia/environments/v1.14/Manifest.toml` [7d9f7c33] + Accessors v0.1.45 [79e6a3ab] + Adapt v4.7.0 [66dad0bd] + AliasTables v1.1.3 [4c555306] + ArrayLayouts v1.12.2 [69666777] + Arrow v2.8.1 [31f734f8] + ArrowTypes v2.3.0 [093aae92] + BSplineKit v0.19.2 [aae01518] + BandedMatrices v1.12.0 [c3b6d118] + BitIntegers v0.3.7 [fa961155] + CEnum v0.5.0 [5ba52731] + CodecLz4 v0.4.6 [6b39b394] + CodecZstd v0.8.7 [861a8166] + Combinatorics v1.1.0 [38540f10] + CommonSolve v0.2.14 [bbf7d656] + CommonSubexpressions v0.3.1 [f70d9fcc] + CommonWorldInvalidations v1.2.0 [34da2185] + Compat v4.18.1 [a33af91c] + CompositionsBase v0.1.2 [f0e56b4a] + ConcurrentUtilities v2.6.0 [187b0558] + ConstructionBase v1.6.0 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.19.6 [e2d170a0] + DataValueInterfaces v1.0.0 [8bb1440f] + DelimitedFiles v1.9.1 [85a47980] + Dictionaries v0.4.6 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.16.0 [31c24e10] + Distributions v0.25.131 [ffbed154] + DocStringExtensions v0.9.5 [4e289a0a] + EnumX v1.0.7 [e2ba6199] + ExprTools v0.1.11 [442a2c76] + FastGaussQuadrature v1.3.0 [1a297f60] + FillArrays v1.17.0 [f6369f11] + ForwardDiff v1.4.5 [38e38edf] + GLM v1.9.5 [a0844989] + Gamma v1.2.0 [34004b35] + HypergeometricFunctions v0.3.30 [615f187c] + IfElse v0.1.1 [313cdc1a] + Indexing v1.1.1 [842dd82b] + InlineStrings v1.4.5 [3587e190] + InverseFunctions v0.1.17 [92d709cd] + IrrationalConstants v0.2.6 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.8.0 [682c06a0] + JSON v1.7.1 [2ab3a3ac] + LogExpFunctions v1.0.1 [1914dd2f] + MacroTools v0.5.16 [e1d29d7a] + Missings v1.2.0 [ff71e718] + MixedModels v5.9.0 [7e9fb7ac] + MixedModelsDatasets v0.2.3 [78c3b35d] + Mocking v0.8.1 [76087f3c] + NLopt v1.2.1 [77ba4419] + NaNMath v1.1.4 [bac558e1] + OrderedCollections v2.0.1 [90014a1f] + PDMats v0.11.41 ⌅ [69de0a69] + Parsers v2.8.7 [2dfb63ee] + PooledArrays v1.4.3 [aea7be01] + PrecompileTools v1.3.4 [21216c6a] + Preferences v1.5.2 [92933f4c] + ProgressMeter v1.11.0 [43287f4e] + PtrArrays v1.4.0 [1fd47b50] + QuadGK v2.11.3 [27983f2f] + RectangularFullPacked v0.2.1 [189a3867] + Reexport v1.2.2 [545c379f] + RegressionFormulae v0.1.4 [79098fc4] + Rmath v0.9.0 [f2b01f46] + Roots v3.0.7 [431bcebd] + SciMLPublic v1.3.0 [6c6a2e73] + Scratch v1.3.0 [91c51154] + SentinelArrays v1.4.10 [1277b4bf] + ShiftedArrays v2.0.0 [a2af1166] + SortingAlgorithms v1.2.3 [276daf66] + SpecialFunctions v2.9.0 [03a91e81] + SplitApplyCombine v1.3.0 [aedffcd0] + Static v1.4.6 [90137ffa] + StaticArrays v1.9.19 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.4 [82ae8749] + StatsAPI v1.8.0 [2913bbd2] + StatsBase v0.34.13 [4c63d2b9] + StatsFuns v2.2.1 [3eaba693] + StatsModels v0.7.10 ⌅ [354b36f9] + StringViews v1.3.7 [ec057cc2] + StructUtils v2.8.5 [dc5dba14] + TZJData v1.5.1+2025b [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.14.0 [f269a46b] + TimeZones v1.22.2 [3bb67fe8] + TranscodingStreams v0.11.3 [9d95f2ec] + TypedTables v1.4.6 [5ced341a] + Lz4_jll v1.10.1+0 [079eb43e] + NLopt_jll v2.11.0+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.2+0 [0dad84c5] + ArgTools v1.2.0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.12.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0 [b27032c2] + LibCURL v1.0.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.14.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.13.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.13.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.5.7+0 [deac9b47] + LibCURL_jll v8.21.0+0 [29816b5a] + LibSSH2_jll v1.11.104+0 [14a3606d] + MozillaCACerts_jll v2026.8.13 [4536629a] + OpenBLAS_jll v0.3.34+0 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.8+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.2+0 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.70.0+0 [3f19e933] + p7zip_jll v17.8.2+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 5.05s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompiling project... 5.0 s ✓ RegressionFormulae 36.1 s ✓ BSplineKit [ Info: Downloading dataset... [ Info: done [ Info: Downloading dataset... [ Info: done 170.0 s ✓ MixedModels 34.0 s ✓ MixedModels → MixedModelsPRIMAExt 37.8 s ✓ MixedModels → MixedModelsFiniteDiffExt 34.0 s ✓ MixedModels → MixedModelsForwardDiffExt 6 dependencies successfully precompiled in 324 seconds. 189 already precompiled. 1 dependency had output during precompilation: ┌ MixedModels │ [ Info: Downloading dataset... │ [ Info: done │ [ Info: Downloading dataset... │ [ Info: done └ Precompilation completed after 243.97s ################################################################################ # Testing # Testing MixedModels Status `/tmp/jl_JuBE8c/Project.toml` [4c88cf16] Aqua v0.8.16 [69666777] Arrow v2.8.1 [093aae92] BSplineKit v0.19.2 [324d7699] CategoricalArrays v1.1.1 [34da2185] Compat v4.18.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.8.2 [31c24e10] Distributions v0.25.131 [7d51a73a] ExplicitImports v1.15.0 [6a86dc24] FiniteDiff v2.33.0 [f6369f11] ForwardDiff v1.4.5 [38e38edf] GLM v1.9.5 [92d709cd] IrrationalConstants v0.2.6 [682c06a0] JSON v1.7.1 [ff71e718] MixedModels v5.9.0 [7e9fb7ac] MixedModelsDatasets v0.2.3 [76087f3c] NLopt v1.2.1 [0a7d04aa] PRIMA v0.2.4 [2dfb63ee] PooledArrays v1.4.3 [aea7be01] PrecompileTools v1.3.4 [92933f4c] ProgressMeter v1.11.0 [27983f2f] RectangularFullPacked v0.2.1 [545c379f] RegressionFormulae v0.1.4 [860ef19b] StableRNGs v1.0.4 [90137ffa] StaticArrays v1.9.19 [10745b16] Statistics v1.11.4 [82ae8749] StatsAPI v1.8.0 [2913bbd2] StatsBase v0.34.13 [3eaba693] StatsModels v0.7.10 [fd094767] Suppressor v0.2.8 [bd369af6] Tables v1.14.0 [9d95f2ec] TypedTables v1.4.6 [b77e0a4c] InteractiveUtils v1.11.0 [37e2e46d] LinearAlgebra v1.14.0 [d6f4376e] Markdown v1.11.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [2f01184e] SparseArrays v1.13.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_JuBE8c/Manifest.toml` [7d9f7c33] Accessors v0.1.45 [79e6a3ab] Adapt v4.7.0 [66dad0bd] AliasTables v1.1.3 [4c88cf16] Aqua v0.8.16 [4fba245c] ArrayInterface v7.30.1 [4c555306] ArrayLayouts v1.12.2 [69666777] Arrow v2.8.1 [31f734f8] ArrowTypes v2.3.0 [093aae92] BSplineKit v0.19.2 [aae01518] BandedMatrices v1.12.0 [c3b6d118] BitIntegers v0.3.7 [fa961155] CEnum v0.5.0 [324d7699] CategoricalArrays v1.1.1 [5ba52731] CodecLz4 v0.4.6 [6b39b394] CodecZstd v0.8.7 [861a8166] Combinatorics v1.1.0 [38540f10] CommonSolve v0.2.14 [bbf7d656] CommonSubexpressions v0.3.1 [f70d9fcc] CommonWorldInvalidations v1.2.0 [34da2185] Compat v4.18.1 [a33af91c] CompositionsBase v0.1.2 [f0e56b4a] ConcurrentUtilities v2.6.0 [187b0558] ConstructionBase v1.6.0 [a8cc5b0e] Crayons v4.2.0 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.8.2 [864edb3b] DataStructures v0.19.6 [e2d170a0] DataValueInterfaces v1.0.0 [8bb1440f] DelimitedFiles v1.9.1 [85a47980] Dictionaries v0.4.6 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.16.0 [31c24e10] Distributions v0.25.131 [ffbed154] DocStringExtensions v0.9.5 [4e289a0a] EnumX v1.0.7 [7d51a73a] ExplicitImports v1.15.0 [e2ba6199] ExprTools v0.1.11 [442a2c76] FastGaussQuadrature v1.3.0 [1a297f60] FillArrays v1.17.0 [6a86dc24] FiniteDiff v2.33.0 [f6369f11] ForwardDiff v1.4.5 [38e38edf] GLM v1.9.5 [a0844989] Gamma v1.2.0 [34004b35] HypergeometricFunctions v0.3.30 [615f187c] IfElse v0.1.1 [313cdc1a] Indexing v1.1.1 [842dd82b] InlineStrings v1.4.5 [3587e190] InverseFunctions v0.1.17 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.6 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.8.0 [682c06a0] JSON v1.7.1 [b964fa9f] LaTeXStrings v1.4.1 [2ab3a3ac] LogExpFunctions v1.0.1 [1914dd2f] MacroTools v0.5.16 [e1d29d7a] Missings v1.2.0 [ff71e718] MixedModels v5.9.0 [7e9fb7ac] MixedModelsDatasets v0.2.3 [78c3b35d] Mocking v0.8.1 [76087f3c] NLopt v1.2.1 [77ba4419] NaNMath v1.1.4 [bac558e1] OrderedCollections v2.0.1 [90014a1f] PDMats v0.11.41 [0a7d04aa] PRIMA v0.2.4 ⌅ [69de0a69] Parsers v2.8.7 [2dfb63ee] PooledArrays v1.4.3 [aea7be01] PrecompileTools v1.3.4 [21216c6a] Preferences v1.5.2 [08abe8d2] PrettyTables v3.4.8 [92933f4c] ProgressMeter v1.11.0 [43287f4e] PtrArrays v1.4.0 [1fd47b50] QuadGK v2.11.3 [27983f2f] RectangularFullPacked v0.2.1 [189a3867] Reexport v1.2.2 [545c379f] RegressionFormulae v0.1.4 [ae029012] Requires v1.3.1 [79098fc4] Rmath v0.9.0 [f2b01f46] Roots v3.0.7 [431bcebd] SciMLPublic v1.3.0 [6c6a2e73] Scratch v1.3.0 [91c51154] SentinelArrays v1.4.10 [efcf1570] Setfield v1.1.2 [1277b4bf] ShiftedArrays v2.0.0 [a2af1166] SortingAlgorithms v1.2.3 [276daf66] SpecialFunctions v2.9.0 [03a91e81] SplitApplyCombine v1.3.0 [860ef19b] StableRNGs v1.0.4 [aedffcd0] Static v1.4.6 [90137ffa] StaticArrays v1.9.19 [1e83bf80] StaticArraysCore v1.4.4 [10745b16] Statistics v1.11.4 [82ae8749] StatsAPI v1.8.0 [2913bbd2] StatsBase v0.34.13 [4c63d2b9] StatsFuns v2.2.1 [3eaba693] StatsModels v0.7.10 ⌅ [892a3eda] StringManipulation v0.5.0 ⌅ [354b36f9] StringViews v1.3.7 [ec057cc2] StructUtils v2.8.5 [fd094767] Suppressor v0.2.8 [dc5dba14] TZJData v1.5.1+2025b [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.14.0 [f269a46b] TimeZones v1.22.2 [3bb67fe8] TranscodingStreams v0.11.3 ⌅ [c3b1956e] TypeUtils v1.14.0 [9d95f2ec] TypedTables v1.4.6 [5ced341a] Lz4_jll v1.10.1+0 [079eb43e] NLopt_jll v2.11.0+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [eead6e0c] PRIMA_jll v0.7.1+0 [f50d1b31] Rmath_jll v0.5.2+0 [0dad84c5] ArgTools v1.2.0 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.12.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0 [b27032c2] LibCURL v1.0.0 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.14.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.14.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.13.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.13.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.5.7+0 [deac9b47] LibCURL_jll v8.21.0+0 [e37daf67] LibGit2_jll v1.9.7+0 [29816b5a] LibSSH2_jll v1.11.104+0 [14a3606d] MozillaCACerts_jll v2026.8.13 [4536629a] OpenBLAS_jll v0.3.34+0 [05823500] OpenLibm_jll v0.8.7+0 [458c3c95] OpenSSL_jll v3.5.8+0 [efcefdf7] PCRE2_jll v10.47.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.2+0 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.70.0+0 [3f19e933] p7zip_jll v17.8.2+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... ┌ Info: Julia Version 1.14.0-DEV.3071 │ Build Info: │ Commit c76331c927* (2026-08-30 09:18 UTC) │ GC: Built with stock GC │ Platform Info: │ OS: Linux (x86_64-unknown-linux-gnu) │ CPU: 128 × AMD EPYC 7502 32-Core Processor (znver2) │ WORD_SIZE: 64 │ LLVM: libLLVM-22.1.8 (ORCJIT, znver2) │ Threads: 1 default, 0 interactive, 1 GC (on 1 virtual cores) │ Environment: │ JULIA_CPU_THREADS = 1 │ JULIA_NUM_PRECOMPILE_TASKS = 1 │ JULIA_PKG_PRECOMPILE_AUTO = 0 │ JULIA_PKGEVAL = true │ JULIA_DEPOT_PATH = /home/pkgeval/.julia:/usr/local/share/julia: │ JULIA_NUM_THREADS = 1 └ JULIA_LOAD_PATH = @:/tmp/jl_JuBE8c [ Info: LBTConfig([ILP64] libopenblas64_.so) Test Summary: | Pass Total Time Aqua | 9 9 3m02.7s Test Summary: | Pass Total Time ExplicitImports | 2 2 1m10.2s [ Info: Downloading dataset... [ Info: done Test Summary: | Pass Total Time average | 1 1 0.1s Test Summary: | Pass Total Time densify | 3 3 2.6s Test Summary: | Pass Total Time isconstant | 13 13 2.8s [ Info: Downloading dataset... [ Info: done Test Summary: | Pass Total Time PCA | 3 3 1m09.9s Test Summary: | Pass Total Time formula | 2 2 39.7s Test Summary: | Pass Total Time formula misspecification | 8 8 30.6s Test Summary: | Pass Total Time non-unicode function aliases for exports | 2 2 0.0s Test Summary: | Pass Total Time fullranknumeric | 1 1 1.5s Test Summary: | Pass Total Time fullrankcategorical | 2 2 5.4s Test Summary: | Pass Total Time dependentcolumn | 4 4 1.0s Test Summary: | Pass Total Time qr missing cells | 2 2 0.1s Test Summary: | Pass Total Time zero columns in X | 2 2 0.1s [ Info: Downloading dataset... [ Info: done Test Summary: | Pass Total Time UBlk | 24 24 20.0s Test Summary: | Pass Total Time mul! | 36 36 1.9s Test Summary: | Pass Total Time reweight! | 2 2 11.3s Test Summary: | Pass Total Time rankupdate! | 5 5 7.3s Test Summary: | Pass Total Time rankUpdate! HermitianRFP | 35 35 1m35.8s Test Summary: | Pass Total Time lmulλ! | 1 1 9.9s Test Summary: | Pass Total Time Xymat | 15 15 1.8s [ Info: Downloading dataset... [ Info: done Test Summary: | Pass Broken Total Time XymatSparse | 12 1 13 2m59.6s [ Info: Downloading dataset... [ Info: done Test Summary: | Pass Total Time scalarReMat | 39 39 15.9s Test Summary: | Pass Total Time RandomEffectsTerm | 18 18 20.7s Test Summary: | Pass Total Time random effects term syntax | 24 24 25.7s Test Summary: | Pass Total Time Grouping | 1 1 1.8s Test Summary: | Pass Total Time Grouping pseudo-contrasts | 10 10 14.6s Test Summary: | Pass Broken Total Time Auto application of Grouping() | 36 3 39 14.0s Test Summary: | Pass Total Time LMM from MixedModel | 3 3 9.9s Test Summary: | Pass Total Time offset | 2 2 0.8s Test Summary: | Pass Total Time Dyestuff | 83 83 1m09.4s [ Info: Downloading dataset... [ Info: done Test Summary: | Pass Total Time Dyestuff2 | 11 11 13.2s [ Info: Downloading dataset... [ Info: done Test Summary: | Pass Total Time penicillin | 26 26 10.0s Test Summary: | Pass Total Time pastes | 22 22 7.0s Test Summary: | Pass Total Time InstEval | 26 26 5.5s Test Summary: | Pass Total Time sortlevels | 12 12 37.0s Test Summary: | Pass Total Time sleep | 139 139 1m31.0s Test Summary: | Pass Total Time d3 | 6 6 1m28.2s Test Summary: | Pass Total Time kb07 | 6 6 27.3s [ Info: Downloading dataset... [ Info: done Test Summary: | Pass Total Time oxide | 1 1 12.7s Test Summary: | Pass Total Time Rank deficient | 7 7 5.6s Test Summary: | Pass Total Time coeftable | 1 1 0.0s Test Summary: | Pass Total Time wts | 3 3 3.4s Test Summary: | Pass Total Time unifying ReMat eltypes | 3 3 4.2s Test Summary: | Pass Total Time recovery from misscaling | 2 2 10.3s Test Summary: | Pass Total Time methods we don't define | 4 4 1.7s Test Summary: | Pass Total Time GLMM from MixedModel | 2 2 11.7s [ Info: Downloading dataset... [ Info: done Test Summary: | Pass Total Time Type for instance | 9 9 2.3s Test Summary: | Pass Total Time contra | 41 41 18.2s [ Info: Downloading dataset... [ Info: done Test Summary: | Pass Total Time cbpp | 19 19 25.9s Test Summary: | Pass Total Time verbagg | 4 4 15.9s [ Info: Downloading dataset... [ Info: done Test Summary: | Pass Total Time grouseticks | 8 8 2m12.4s Test Summary: | Pass Total Time dispersion | 3 3 9.1s [ Info: Downloading dataset... [ Info: done Test Summary: | Pass Total Time mmec | 4 4 6.7s Test Summary: | Pass Total Time GLMM saveoptsum | 6 6 2.2s Test Summary: | Pass Total Time Bad initial value | 2 2 14.8s Test Summary: | Pass Total Time GHnorm | 5 5 0.8s Test Summary: | Pass Total Time linear, and lmm wrapper | 8 8 1.5s Test Summary: | Pass Total Time generalized | 1 1 12.7s Test Summary: | Pass Total Time Normal-IdentityLink | 2 2 0.3s Test Summary: | Pass Total Time Normal Distribution GLMM | 1 1 3.1s Test Summary: | Pass Total Time Missing Omit | 2 2 4.8s Minimizing 11 Time: 0:00:00 (26.95 ms/it) objective: 329.35687193948746   Minimizing 16 Time: 0:00:00 (38.60 ms/it) Test Summary: | Pass Total Time isnested | 10 10 15.0s Test Summary: | Pass Total Time likelihoodratio test | 22 22 42.7s Test Summary: | Pass Total Time simulate!(::MixedModel) | 9 9 21.4s Test Summary: | Pass Total Time bootstrap | 52 52 3m43.6s Test Summary: | Pass Total Time show and summary | 7 7 19.0s Test Summary: | Pass Total Time markdown | 10 10 15.0s Test Summary: | Pass Total Time html | 3 3 1.0s Test Summary: | Pass Total Time latex | 7 7 0.9s Test Summary: | Pass Total Time opt limits | 6 6 1.3s Test Summary: | Pass Total Time simulate[!](::AbstractVector) | 11 11 30.5s ┌ Warning: Fixed-effects matrix is rank deficient └ @ MixedModels ~/.julia/packages/MixedModels/ujBOk/src/Xymat.jl:67 ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile. --trace-compile is enabled during profile collection. ====================================================================================== cmd: /opt/julia/bin/julia 41 running 1 of 1 signal (10): User defined signal 1 inst_datatype_inner at /source/src/jltypes.c:2794:13 inst_datatype_env at /source/src/jltypes.c:1528:16 inst_datatype_env at /source/src/jltypes.c:1532:12 inst_datatype_env at /source/src/jltypes.c:1532:12 [inlined] apply_type_ at /source/src/jltypes.c:1564:20 copy at ./broadcast.jl:972:0 [inlined] materialize at ./broadcast.jl:920:0 (pc: 105) unknown function (ip: 0x75bdc4fe9f32) at (unknown file) _jl_invoke at /source/src/gf.c:4584:23 [inlined] ijl_apply_generic at /source/src/gf.c:4832:12 reweight! at /home/pkgeval/.julia/packages/MixedModels/ujBOk/src/linearmixedmodel.jl:1166:0 (pc: 128) unknown function (ip: 0x75be3a676f6a) at (unknown file) _jl_invoke at /source/src/gf.c:4584:23 [inlined] ijl_apply_generic at /source/src/gf.c:4832:12 deviance! at /home/pkgeval/.julia/packages/MixedModels/ujBOk/src/generalizedlinearmixedmodel.jl:143:0 (pc: 9) deviance! at /home/pkgeval/.julia/packages/MixedModels/ujBOk/src/generalizedlinearmixedmodel.jl:141:0 [inlined] #pirls!#121 at /home/pkgeval/.julia/packages/MixedModels/ujBOk/src/generalizedlinearmixedmodel.jl:637:0 (pc: 332) pirls! at /home/pkgeval/.julia/packages/MixedModels/ujBOk/src/generalizedlinearmixedmodel.jl:614:0 [inlined] #_objective!#120 at /home/pkgeval/.julia/packages/MixedModels/ujBOk/src/generalizedlinearmixedmodel.jl:571:0 (pc: 90) _objective! at /home/pkgeval/.julia/packages/MixedModels/ujBOk/src/generalizedlinearmixedmodel.jl:568:0 (pc: 7) obj at /home/pkgeval/.julia/packages/MixedModels/ujBOk/src/MixedModelsNLoptExt.jl:72:0 (pc: 24) nlopt_callback_wrapper at /home/pkgeval/.julia/packages/NLopt/wMgqN/src/NLopt.jl:522:0 (pc: 137) unknown function (ip: 0x75be3a696655) at (unknown file) newuoa at /home/pkgeval/.julia/artifacts/5a47f63acafe529d6a1db5343de2e8c2a6b6c38a/lib/libnlopt.so (unknown line) nlopt_optimize at /home/pkgeval/.julia/artifacts/5a47f63acafe529d6a1db5343de2e8c2a6b6c38a/lib/libnlopt.so (unknown line) nlopt_optimize at /home/pkgeval/.julia/packages/NLopt/wMgqN/src/libnlopt.jl:182:0 [inlined] optimize! at /home/pkgeval/.julia/packages/NLopt/wMgqN/src/NLopt.jl:849:0 (pc: 18) optimize at /home/pkgeval/.julia/packages/NLopt/wMgqN/src/NLopt.jl:863:0 (pc: 101) unknown function (ip: 0x75be3a697d12) at (unknown file) _jl_invoke at /source/src/gf.c:4584:23 [inlined] ijl_apply_generic at /source/src/gf.c:4832:12 #optimize!#3 at /home/pkgeval/.julia/packages/MixedModels/ujBOk/src/MixedModelsNLoptExt.jl:89:0 (pc: 92) optimize! at /home/pkgeval/.julia/packages/MixedModels/ujBOk/src/MixedModelsNLoptExt.jl:61:0 [inlined] #optimize!#45 at /home/pkgeval/.julia/packages/MixedModels/ujBOk/src/optsummary.jl:181:0 (pc: 13) optimize! at /home/pkgeval/.julia/packages/MixedModels/ujBOk/src/optsummary.jl:181:0 [inlined] #fit!#99 at /home/pkgeval/.julia/packages/MixedModels/ujBOk/src/generalizedlinearmixedmodel.jl:292:0 (pc: 417) fit! at /home/pkgeval/.julia/packages/MixedModels/ujBOk/src/generalizedlinearmixedmodel.jl:251:0 (pc: 37) unknown function (ip: 0x75be3a68af24) at (unknown file) _jl_invoke at /source/src/gf.c:4584:23 [inlined] ijl_apply_generic at /source/src/gf.c:4832:12 #fit#96 at /home/pkgeval/.julia/packages/MixedModels/ujBOk/src/generalizedlinearmixedmodel.jl:187:0 (pc: 3) fit at /home/pkgeval/.julia/packages/MixedModels/ujBOk/src/generalizedlinearmixedmodel.jl:174:0 (pc: 26) unknown function (ip: 0x75be3a687dcc) at (unknown file) _jl_invoke at /source/src/gf.c:4584:23 [inlined] ijl_apply_generic at /source/src/gf.c:4832:12 #fit#95 at /home/pkgeval/.julia/packages/MixedModels/ujBOk/src/generalizedlinearmixedmodel.jl:171:0 (pc: 3) unknown function (ip: 0x75be3a687800) at (unknown file) _jl_invoke at /source/src/gf.c:4584:23 [inlined] ijl_invoke at /source/src/gf.c:4591:12 fit at /home/pkgeval/.julia/packages/MixedModels/ujBOk/src/generalizedlinearmixedmodel.jl:163:0 (pc: 2) unknown function (ip: 0x75be3a6874f0) at (unknown file) _jl_invoke at /source/src/gf.c:4584:23 [inlined] ijl_invoke at /source/src/gf.c:4591:12 #fit#98 at /home/pkgeval/.julia/packages/MixedModels/ujBOk/src/generalizedlinearmixedmodel.jl:212:0 [inlined] fit at /home/pkgeval/.julia/packages/MixedModels/ujBOk/src/generalizedlinearmixedmodel.jl:204:0 [inlined] fit at /home/pkgeval/.julia/packages/MixedModels/ujBOk/src/generalizedlinearmixedmodel.jl:204:0 (pc: 1) unknown function (ip: 0x75be3a6871b0) at (unknown file) _jl_invoke at /source/src/gf.c:4584:23 [inlined] ijl_apply_generic at /source/src/gf.c:4832:12 macro expansion at /home/pkgeval/.julia/packages/MixedModels/ujBOk/test/predict.jl:248:0 [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.14/Test/src/Test.jl:2247:0 [inlined] macro expansion at /home/pkgeval/.julia/packages/MixedModels/ujBOk/test/predict.jl:246:0 [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.14/Test/src/Test.jl:2247:0 [inlined] top-level scope at /home/pkgeval/.julia/packages/MixedModels/ujBOk/test/predict.jl:53:0 (pc: 8864) jl_invoke_oneshot at /source/src/gf.c:4625:23 ijl_eval_thunk at /source/src/toplevel.c:764:18 jl_toplevel_eval_flex at /source/src/toplevel.c:716:26 jl_eval_toplevel_stmts at /source/src/toplevel.c:601:15 jl_toplevel_eval_flex at /source/src/toplevel.c:688:27 ijl_toplevel_eval at /source/src/toplevel.c:786:12 ijl_toplevel_eval_in at /source/src/toplevel.c:831:13 eval at ./boot.jl:618:0 (pc: 1) include_string at ./loading.jl:3258:0 (pc: 140) _jl_invoke at /source/src/gf.c:4584:23 [inlined] ijl_apply_generic at /source/src/gf.c:4832:12 _include at ./loading.jl:3320:0 (pc: 123) include at ./Base.jl:335:0 (pc: 1) IncludeInto at ./Base.jl:336:0 (pc: 2) jfptr_IncludeInto_1.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4584:23 [inlined] ijl_apply_generic at /source/src/gf.c:4832:12 jl_apply at /source/src/julia.h:2533:12 [inlined] do_call at /source/src/interpreter.c:123:26 eval_value at /source/src/interpreter.c:259:16 eval_stmt_value at /source/src/interpreter.c:194:23 [inlined] eval_body at /source/src/interpreter.c:829:21 jl_interpret_toplevel_thunk at /source/src/interpreter.c:1052:21 ijl_eval_thunk at /source/src/toplevel.c:772:18 jl_toplevel_eval_flex at /source/src/toplevel.c:716:26 jl_eval_toplevel_stmts at /source/src/toplevel.c:601:15 jl_toplevel_eval_flex at /source/src/toplevel.c:688:27 ijl_toplevel_eval at /source/src/toplevel.c:786:12 ijl_toplevel_eval_in at /source/src/toplevel.c:831:13 eval at ./boot.jl:618:0 (pc: 1) include_string at ./loading.jl:3258:0 (pc: 140) _jl_invoke at /source/src/gf.c:4584:23 [inlined] ijl_apply_generic at /source/src/gf.c:4832:12 _include at ./loading.jl:3320:0 (pc: 123) include at ./Base.jl:335:0 (pc: 1) IncludeInto at ./Base.jl:336:0 (pc: 2) jfptr_IncludeInto_1.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4584:23 [inlined] ijl_apply_generic at /source/src/gf.c:4832:12 jl_apply at /source/src/julia.h:2533:12 [inlined] do_call at /source/src/interpreter.c:123:26 eval_value at /source/src/interpreter.c:259:16 eval_stmt_value at /source/src/interpreter.c:194:23 [inlined] eval_body at /source/src/interpreter.c:829:21 jl_interpret_toplevel_thunk at /source/src/interpreter.c:1052:21 ijl_eval_thunk at /source/src/toplevel.c:772:18 jl_toplevel_eval_flex at /source/src/toplevel.c:716:26 jl_eval_toplevel_stmts at /source/src/toplevel.c:601:15 jl_toplevel_eval_flex at /source/src/toplevel.c:688:27 ijl_toplevel_eval at /source/src/toplevel.c:786:12 ijl_toplevel_eval_in at /source/src/toplevel.c:831:13 eval at ./boot.jl:618:0 (pc: 1) __script_entry_eval at ./client.jl:106:0 [inlined] exec_options at ./client.jl:350:0 (pc: 426) _start at ./client.jl:695:0 (pc: 217) jfptr__start_0.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4584:23 [inlined] ijl_apply_generic at /source/src/gf.c:4832:12 jl_apply at /source/src/julia.h:2533:12 [inlined] true_main at /source/src/jlapi.c:989:29 jl_repl_entrypoint at /source/src/jlapi.c:1156:15 main at /source/cli/loader_exe.c:117:15 unknown function (ip: 0x75be58107249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point. Disabling --trace-compile ============================================================== Test Summary: | Pass Total Time ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile. --trace-compile is enabled during profile collection. ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404:0 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430:0 ijl_task_get_next at /source/src/scheduler.c:573:34 wait at ./task.jl:1652:0 (pc: 108) wait_forever at ./task.jl:1528:0 (pc: 4) jfptr_wait_forever_0.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4584:23 [inlined] ijl_apply_generic at /source/src/gf.c:4832:12 jl_apply at /source/src/julia.h:2533:12 [inlined] start_task at /source/src/task.c:1278:23 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point. Disabling --trace-compile ============================================================== Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x0000736ce6674490 Total snapshots: 155. Utilization: 0% ╎155 @Base/task.jl:1528 wait_forever() 154╎ 155 @Base/task.jl:? wait() Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x000075be3bbfc010 Total snapshots: 1. Utilization: 100% ╎1 @Base/client.jl:695 _start() ╎ 1 @Base/client.jl:350 exec_options(opts::Base.JLOptions) ╎ 1 @Base/client.jl:106 __script_entry_eval(mod::Module, ex::Any) ╎ 1 @Base/boot.jl:618 eval(m::Module, e::Any) ╎ 1 @Base/Base.jl:336 (::Base.IncludeInto)(fname::String) ╎ 1 @Base/Base.jl:335 include(mapexpr::Function, mod::Module, _path::Stri… ╎ ╎ 1 @Base/loading.jl:3320 _include(mapexpr::Function, mod::Module, _path… ╎ ╎ 1 @Base/loading.jl:3258 include_string(mapexpr::typeof(identity), mod… ╎ ╎ 1 @Base/boot.jl:618 eval(m::Module, e::Any) ╎ ╎ 1 @Base/Base.jl:336 (::Base.IncludeInto)(fname::String) ╎ ╎ 1 @Base/Base.jl:335 include(mapexpr::Function, mod::Module, _path:… ╎ ╎ ╎ 1 @Base/loading.jl:3320 _include(mapexpr::Function, mod::Module, … ╎ ╎ ╎ 1 @Base/loading.jl:3258 include_string(mapexpr::typeof(identity)… ╎ ╎ ╎ 1 @Base/boot.jl:618 eval(m::Module, e::Any) ╎ ╎ ╎ 1 @MixedModels/…ict.jl:53 top-level scope ╎ ╎ ╎ 1 @Test/src/Test.jl:2247 macro expansion ╎ ╎ ╎ ╎ 1 @MixedModels/…t.jl:246 macro expansion ╎ ╎ ╎ ╎ 1 @Test/src/Test.jl:2247 macro expansion ╎ ╎ ╎ ╎ 1 @MixedModels/…t.jl:248 macro expansion ╎ ╎ ╎ ╎ 1 @MixedModels/….jl:204 kwcall(::@NamedTuple{fast::Bool, … ╎ ╎ ╎ ╎ 1 @MixedModels/….jl:204 kwcall(::@NamedTuple{fast::Bool,… ╎ ╎ ╎ ╎ ╎ 1 @MixedModels/…jl:212 fit(::Type{MixedModel}, f::Formu… ╎ ╎ ╎ ╎ ╎ 1 @MixedModels/…jl:163 kwcall(::@NamedTuple{fast::Bool… ╎ ╎ ╎ ╎ ╎ 1 @MixedModels/…jl:171 fit(::Type{GeneralizedLinearMi… ╎ ╎ ╎ ╎ ╎ 1 @MixedModels/…l:174 kwcall(::@NamedTuple{fast::Boo… ╎ ╎ ╎ ╎ ╎ 1 @MixedModels/…l:187 fit(::Type{GeneralizedLinearM… ╎ ╎ ╎ ╎ ╎ ╎ 1 @MixedModels/…:251 kwcall(::@NamedTuple{fast::Bo… ╎ ╎ ╎ ╎ ╎ ╎ 1 @MixedModels/…:292 fit!(m::GeneralizedLinearMix… ╎ ╎ ╎ ╎ ╎ ╎ 1 @MixedModels/…:181 kwcall(::@NamedTuple{progre… ╎ ╎ ╎ ╎ ╎ ╎ 1 @MixedModels/…:181 optimize!(m::GeneralizedLi… ╎ ╎ ╎ ╎ ╎ ╎ 1 @MixedModels/…:61 kwcall(::@NamedTuple{progr… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @MixedModels/…:89 optimize!(m::GeneralizedL… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @NLopt/…t.jl:863 optimize(o::NLopt.Opt, x:… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @NLopt/…t.jl:849 optimize!(o::NLopt.Opt, … ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @NLopt/…t.jl:182 nlopt_optimize(opt::NLo… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @NLopt/…t.jl:522 nlopt_callback_wrapper… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @MixedModels/…:72 (::MixedModels.Mixed… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @MixedModels/…:568 kwcall(::@NamedTup… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @MixedModels/…:571 _objective!(m::Ge… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @MixedModels/…:614 pirls!(m::Genera… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @MixedModels/…:649 pirls!(m::Gener… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +1 1 @MixedModels/…:141 deviance!(m::Ge… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +2 1 @MixedModels/…:143 deviance!(m::Ge… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +3 1 @MixedModels/…:1168 reweight!(m::L… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +4 1 @MixedModels/…:1464 updateA!(m::Li… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +5 1 @LinearAlgebra/…:281 mul!(C::Matri… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +6 1 @MixedModels/…:340 mul!(C::Matrix{… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +7 1 @Base/…al.jl:774 setindex!(A::Matr… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +8 1 @Base/…ay.jl:1065 setindex!(::Matr… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +9 1 @Base/…ay.jl:1071 _setindex!(::Mat… predict | 62 62 2m42.4s [1] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404:0 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430:0 ijl_task_get_next at /source/src/scheduler.c:573:34 wait at ./task.jl:1652:0 (pc: 108) wait_safe_interrupt at ./park.jl:231:0 (pc: 6) #wait#428 at ./condition.jl:390:0 (pc: 117) [41] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/MixedModels/ujBOk/test/sigma.jl:5 wait at ./condition.jl:325:0 [inlined] _trywait at ./asyncevent.jl:204:0 (pc: 38) #_trywait#722 at ./asyncevent.jl:175:0 [inlined] _trywait at ./asyncevent.jl:175:0 [inlined] profile_printing_listener at ./Base.jl:366:0 (pc: 23) #start_profile_listener##0 at ./Base.jl:386:0 (pc: 2) jfptr_YY.start_profile_listenerYY.YY.0_0.1 at /opt/julia/lib/julia/sys.so (unknown line) start_task at /source/src/task.c:1275:23 unknown function (ip: (nil)) at (unknown file) Allocations: 16855283 (Pool: 16854524; Big: 759); GC: 17 _ZN4llvm16InstCombinerImpl23SimplifyDemandedUseBitsEPNS_11InstructionERKNS_5APIntERNS_9KnownBitsERKNS_13SimplifyQueryEj at /opt/julia/bin/../lib/julia/libLLVM.so.22.1jl (unknown line) _ZN4llvm16InstCombinerImpl31SimplifyDemandedInstructionBitsERNS_11InstructionERNS_9KnownBitsE at /opt/julia/bin/../lib/julia/libLLVM.so.22.1jl (unknown line) _ZN4llvm16InstCombinerImpl31SimplifyDemandedInstructionBitsERNS_11InstructionE at /opt/julia/bin/../lib/julia/libLLVM.so.22.1jl (unknown line) _ZN4llvm16InstCombinerImpl21commonShiftTransformsERNS_14BinaryOperatorE.part.0 at /opt/julia/bin/../lib/julia/libLLVM.so.22.1jl (unknown line) _ZN4llvm16InstCombinerImpl8visitShlERNS_14BinaryOperatorE at /opt/julia/bin/../lib/julia/libLLVM.so.22.1jl (unknown line) _ZN4llvm16InstCombinerImpl3runEv at /opt/julia/bin/../lib/julia/libLLVM.so.22.1jl (unknown line) _ZL31combineInstructionsOverFunctionRN4llvm8FunctionERNS_19InstructionWorklistEPNS_9AAResultsERNS_15AssumptionCacheERNS_17TargetLibraryInfoERNS_19TargetTransformInfoERNS_13DominatorTreeERNS_25OptimizationRemarkEmitterEPNS_18BlockFrequencyInfoEPNS_21BranchProbabilityInfoEPNS_18ProfileSummaryInfoERKNS_18InstCombineOptionsE at /opt/julia/bin/../lib/julia/libLLVM.so.22.1jl (unknown line) _ZN4llvm15InstCombinePass3runERNS_8FunctionERNS_15AnalysisManagerIS1_JEEE at /opt/julia/bin/../lib/julia/libLLVM.so.22.1jl (unknown line) run at /source/usr/include/llvm/IR/PassManagerInternal.h:91:41 _ZN4llvm11PassManagerINS_8FunctionENS_15AnalysisManagerIS1_JEEEJEE3runERS1_RS3_ at /opt/julia/bin/../lib/julia/libLLVM.so.22.1jl (unknown line) run at /source/usr/include/llvm/IR/PassManagerInternal.h:91:41 _ZN4llvm27ModuleToFunctionPassAdaptor3runERNS_6ModuleERNS_15AnalysisManagerIS1_JEEE at /opt/julia/bin/../lib/julia/libLLVM.so.22.1jl (unknown line) run at /source/usr/include/llvm/IR/PassManagerInternal.h:91:41 _ZN4llvm11PassManagerINS_6ModuleENS_15AnalysisManagerIS1_JEEEJEE3runERS1_RS3_ at /opt/julia/bin/../lib/julia/libLLVM.so.22.1jl (unknown line) run at /source/src/pipeline.cpp:990:12 operator() at /source/src/jitlayers.cpp:1461:17 operator() at /source/src/jitlayers.cpp:1599:12 [inlined] optimizeModule at /source/src/jitlayers.cpp:2689:18 operator() at /source/src/jitlayers.cpp:1051:35 [inlined] CallImpl):: > at /source/usr/include/llvm/ADT/FunctionExtras.h:212:49 operator() at /source/usr/include/llvm/ADT/FunctionExtras.h:366:62 [inlined] operator() at /source/src/objcache.cpp:340:24 [inlined] get at /source/src/objcache.cpp:381:30 materialize at /source/src/jitlayers.cpp:1061:37 _ZN4llvm3orc19MaterializationTask3runEv at /opt/julia/bin/../lib/julia/libLLVM.so.22.1jl (unknown line) dispatch at /source/src/julia-task-dispatcher.h:377:13 [inlined] dispatch at /source/src/julia-task-dispatcher.h:366:6 _ZN4llvm3orc16ExecutionSession12dispatchTaskESt10unique_ptrINS0_4TaskESt14default_deleteIS3_EE at /opt/julia/bin/../lib/julia/libLLVM.so.22.1jl (unknown line) _ZN4llvm3orc16ExecutionSession22dispatchOutstandingMUsEv at /opt/julia/bin/../lib/julia/libLLVM.so.22.1jl (unknown line) _ZN4llvm3orc16ExecutionSession17OL_completeLookupESt10unique_ptrINS0_21InProgressLookupStateESt14default_deleteIS3_EESt10shared_ptrINS0_23AsynchronousSymbolQueryEESt8functionIFvRKNS_8DenseMapIPNS0_8JITDylibENS_8DenseSetINS0_15SymbolStringPtrENS_12DenseMapInfoISF_vEEEENSG_ISD_vEENS_6detail12DenseMapPairISD_SI_EEEEEE at /opt/julia/bin/../lib/julia/libLLVM.so.22.1jl (unknown line) _ZN4llvm3orc25InProgressFullLookupState8completeESt10unique_ptrINS0_21InProgressLookupStateESt14default_deleteIS3_EE at /opt/julia/bin/../lib/julia/libLLVM.so.22.1jl (unknown line) _ZN4llvm3orc16ExecutionSession19OL_applyQueryPhase1ESt10unique_ptrINS0_21InProgressLookupStateESt14default_deleteIS3_EENS_5ErrorE at /opt/julia/bin/../lib/julia/libLLVM.so.22.1jl (unknown line) _ZN4llvm3orc16ExecutionSession6lookupENS0_10LookupKindERKSt6vectorISt4pairIPNS0_8JITDylibENS0_19JITDylibLookupFlagsEESaIS8_EENS0_15SymbolLookupSetENS0_11SymbolStateENS_15unique_functionIFvNS_8ExpectedINS_8DenseMapINS0_15SymbolStringPtrENS0_17ExecutorSymbolDefENS_12DenseMapInfoISI_vEENS_6detail12DenseMapPairISI_SJ_EEEEEEEEESt8functionIFvRKNSH_IS6_NS_8DenseSetISI_SL_EENSK_IS6_vEENSN_IS6_SV_EEEEEE at /opt/julia/bin/../lib/julia/libLLVM.so.22.1jl (unknown line) publishCIs at /source/src/jitlayers.cpp:2247:14 jl_compile_codeinst_impl at /source/src/jitlayers.cpp:521:39 jl_compile_method_very_internal at /source/src/gf.c:4099:27 _jl_invoke at /source/src/gf.c:4576:16 [inlined] ijl_apply_generic at /source/src/gf.c:4832:12 #LinearMixedModel#54 at /home/pkgeval/.julia/packages/MixedModels/ujBOk/src/linearmixedmodel.jl:97:0 (pc: 8) LinearMixedModel at /home/pkgeval/.julia/packages/MixedModels/ujBOk/src/linearmixedmodel.jl:72:0 [inlined] #fit#61 at /home/pkgeval/.julia/packages/MixedModels/ujBOk/src/linearmixedmodel.jl:280:0 (pc: 1) fit at /home/pkgeval/.julia/packages/MixedModels/ujBOk/src/linearmixedmodel.jl:269:0 [inlined] #fit#63 at /home/pkgeval/.julia/packages/MixedModels/ujBOk/src/linearmixedmodel.jl:313:0 [inlined] fit at /home/pkgeval/.julia/packages/MixedModels/ujBOk/src/linearmixedmodel.jl:303:0 (pc: 15) unknown function (ip: 0x75bdc0496004) at (unknown file) _jl_invoke at /source/src/gf.c:4584:23 [inlined] ijl_apply_generic at /source/src/gf.c:4832:12 jl_apply at /source/src/julia.h:2533:12 [inlined] do_call at /source/src/interpreter.c:123:26 eval_value at /source/src/interpreter.c:259:16 eval_body at /source/src/interpreter.c:735:35 eval_body at /source/src/interpreter.c:704:21 eval_body at /source/src/interpreter.c:712:21 eval_body at /source/src/interpreter.c:712:21 eval_body at /source/src/interpreter.c:712:21 jl_interpret_toplevel_thunk at /source/src/interpreter.c:1052:21 ijl_eval_thunk at /source/src/toplevel.c:772:18 jl_toplevel_eval_flex at /source/src/toplevel.c:716:26 jl_eval_toplevel_stmts at /source/src/toplevel.c:601:15 jl_toplevel_eval_flex at /source/src/toplevel.c:688:27 ijl_toplevel_eval at /source/src/toplevel.c:786:12 ijl_toplevel_eval_in at /source/src/toplevel.c:831:13 eval at ./boot.jl:618:0 (pc: 1) include_string at ./loading.jl:3258:0 (pc: 140) _jl_invoke at /source/src/gf.c:4584:23 [inlined] ijl_apply_generic at /source/src/gf.c:4832:12 _include at ./loading.jl:3320:0 (pc: 123) include at ./Base.jl:335:0 (pc: 1) IncludeInto at ./Base.jl:336:0 (pc: 2) jfptr_IncludeInto_1.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4584:23 [inlined] ijl_apply_generic at /source/src/gf.c:4832:12 jl_apply at /source/src/julia.h:2533:12 [inlined] do_call at /source/src/interpreter.c:123:26 eval_value at /source/src/interpreter.c:259:16 eval_stmt_value at /source/src/interpreter.c:194:23 [inlined] eval_body at /source/src/interpreter.c:829:21 jl_interpret_toplevel_thunk at /source/src/interpreter.c:1052:21 ijl_eval_thunk at /source/src/toplevel.c:772:18 jl_toplevel_eval_flex at /source/src/toplevel.c:716:26 jl_eval_toplevel_stmts at /source/src/toplevel.c:601:15 jl_toplevel_eval_flex at /source/src/toplevel.c:688:27 ijl_toplevel_eval at /source/src/toplevel.c:786:12 ijl_toplevel_eval_in at /source/src/toplevel.c:831:13 eval at ./boot.jl:618:0 (pc: 1) include_string at ./loading.jl:3258:0 (pc: 140) _jl_invoke at /source/src/gf.c:4584:23 [inlined] ijl_apply_generic at /source/src/gf.c:4832:12 _include at ./loading.jl:3320:0 (pc: 123) include at ./Base.jl:335:0 (pc: 1) IncludeInto at ./Base.jl:336:0 (pc: 2) jfptr_IncludeInto_1.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4584:23 [inlined] ijl_apply_generic at /source/src/gf.c:4832:12 jl_apply at /source/src/julia.h:2533:12 [inlined] do_call at /source/src/interpreter.c:123:26 eval_value at /source/src/interpreter.c:259:16 eval_stmt_value at /source/src/interpreter.c:194:23 [inlined] eval_body at /source/src/interpreter.c:829:21 jl_interpret_toplevel_thunk at /source/src/interpreter.c:1052:21 ijl_eval_thunk at /source/src/toplevel.c:772:18 jl_toplevel_eval_flex at /source/src/toplevel.c:716:26 jl_eval_toplevel_stmts at /source/src/toplevel.c:601:15 jl_toplevel_eval_flex at /source/src/toplevel.c:688:27 ijl_toplevel_eval at /source/src/toplevel.c:786:12 ijl_toplevel_eval_in at /source/src/toplevel.c:831:13 eval at ./boot.jl:618:0 (pc: 1) __script_entry_eval at ./client.jl:106:0 [inlined] exec_options at ./client.jl:350:0 (pc: 426) _start at ./client.jl:695:0 (pc: 217) jfptr__start_0.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4584:23 [inlined] ijl_apply_generic at /source/src/gf.c:4832:12 jl_apply at /source/src/julia.h:2533:12 [inlined] true_main at /source/src/jlapi.c:989:29 jl_repl_entrypoint at /source/src/jlapi.c:1156:15 main at /source/cli/loader_exe.c:117:15 unknown function (ip: 0x75be58107249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) Allocations: 514927536 (Pool: 514920734; Big: 6802); GC: 148 PkgEval terminated after 2741.25s: test duration exceeded the time limit