Package evaluation to test sparseQFCA on Julia 1.14.0-DEV.3071 (c76331c927*) started at 2026-08-31T02:21:08.512 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 16.3s ################################################################################ # Installation # Installing sparseQFCA... Resolving package versions... Updating `~/.julia/environments/v1.14/Project.toml` [077cf62c] + sparseQFCA v2.3.0 Updating `~/.julia/environments/v1.14/Manifest.toml` [14f7f29c] + AMD v0.5.3 [5a4f3dfa] + AbstractFBCModels v1.3.0 [3391f64e] + CDDLib v0.10.3 [fa961155] + CEnum v0.5.0 [babc4406] + COBREXA v2.9.1 ⌃ [9961bab8] + Cbc v1.2.0 ⌅ [61c947e1] + Clarabel v0.7.1 ⌃ [e2554f3b] + Clp v1.2.2 [523fee87] + CodecBzip2 v0.8.5 [944b1d66] + CodecZlib v0.7.9 [3da002f7] + ColorTypes v0.12.1 [5ae59095] + Colors v0.13.1 [bbf7d656] + CommonSubexpressions v0.3.1 [34da2185] + Compat v4.18.1 [5515826b] + ConstraintTrees v1.11.1 [187b0558] + ConstructionBase v1.6.0 [864edb3b] + DataStructures v0.19.6 [8bb1440f] + DelimitedFiles v1.9.1 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.16.0 [ffbed154] + DocStringExtensions v0.9.5 [e2685f51] + ECOS v1.1.3 [e2ba6199] + ExprTools v0.1.11 [5789e2e9] + FileIO v1.20.0 ⌅ [53c48c17] + FixedPointNumbers v0.8.6 [f6369f11] + ForwardDiff v1.4.5 [60bf3e95] + GLPK v1.2.1 ⌅ [14197337] + GenericLinearAlgebra v0.3.19 [f67ccb44] + HDF5 v0.17.3 [076d061b] + HashArrayMappedTries v0.2.0 [87dc4568] + HiGHS v1.25.0 [615f187c] + IfElse v0.1.1 [92d709cd] + IrrationalConstants v0.2.6 ⌅ [033835bb] + JLD2 v0.5.15 [692b3bcd] + JLLWrappers v1.8.0 ⌅ [682c06a0] + JSON v0.21.4 [475c1105] + JSONFBCModels v1.1.0 [4076af6c] + JuMP v1.31.2 [2ab3a3ac] + LogExpFunctions v1.0.1 [3da0fdf6] + MPIPreferences v0.1.12 [1914dd2f] + MacroTools v0.5.16 [8c4f8055] + MathOptIIS v0.2.0 [b8f27783] + MathOptInterface v1.53.0 [d8a4904e] + MutableArithmetics v1.8.0 [77ba4419] + NaNMath v1.1.4 ⌅ [bac558e1] + OrderedCollections v1.8.2 ⌅ [69de0a69] + Parsers v2.8.7 [3bbf5609] + PikaParser v0.6.1 [67491407] + Polyhedra v0.8.1 [aea7be01] + PrecompileTools v1.3.4 [21216c6a] + Preferences v1.5.2 [bfc457fd] + QDLDL v0.4.1 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [e5567a89] + SBML v1.6.0 [3e8f9d1a] + SBMLFBCModels v1.1.1 [c946c3f1] + SCS v2.6.4 [7e506255] + ScopedValues v1.6.2 [66db9d55] + SnoopPrecompile v1.0.3 [276daf66] + SpecialFunctions v2.9.0 [860ef19b] + StableRNGs v1.0.4 [90137ffa] + StaticArrays v1.9.19 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.4 ⌅ [a759f4b9] + TimerOutputs v0.5.29 [3bb67fe8] + TranscodingStreams v0.11.3 [1986cc42] + Unitful v1.28.0 [077cf62c] + sparseQFCA v2.3.0 [ae81ac8f] + ASL_jll v0.1.3+0 [6e34b625] + Bzip2_jll v1.0.9+0 ⌅ [38041ee0] + Cbc_jll v200.1000.800+0 ⌅ [3830e938] + Cgl_jll v0.6000.600+0 ⌅ [06985876] + Clp_jll v100.1700.700+1 ⌅ [be027038] + CoinUtils_jll v200.1100.600+0 [c2c64177] + ECOS_jll v200.0.800+0 ⌅ [e8aa6df9] + GLPK_jll v5.0.1+1 ⌅ [0234f1f7] + HDF5_jll v1.14.3+3 [8fd58aa0] + HiGHS_jll v1.15.1+1 [e33a78d0] + Hwloc_jll v2.14.0+0 [1d63c593] + LLVMOpenMP_jll v22.1.7+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [d00139f3] + METIS_jll v5.1.3+0 [7cb0a576] + MPICH_jll v5.0.1+0 [f1f71cc9] + MPItrampoline_jll v5.5.6+0 [d7ed1dd3] + MUMPS_seq_jll v500.900.100+0 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 [656ef2d0] + OpenBLAS32_jll v0.3.34+0 ⌅ [fe0851c0] + OpenMPI_jll v4.1.9+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 ⌅ [7da25872] + Osi_jll v0.10800.700+0 [bb12108a] + SBML_jll v5.21.0+0 [f4f2fc5b] + SCS_jll v300.200.1100+0 ⌅ [02c8fc9c] + XML2_jll v2.13.9+0 [a65dc6b1] + Xorg_libpciaccess_jll v0.19.0+0 [f07e07eb] + cddlib_jll v0.94.15+0 [477f73a3] + libaec_jll v1.1.7+0 [0dad84c5] + ArgTools v1.2.0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.12.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v1.0.0 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.14.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.14.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.13.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.13.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.5.7+0 [781609d7] + GMP_jll v6.3.0+4 [deac9b47] + LibCURL_jll v8.21.0+0 [e37daf67] + LibGit2_jll v1.9.7+0 [29816b5a] + LibSSH2_jll v1.11.104+0 [14a3606d] + MozillaCACerts_jll v2026.8.13 [4536629a] + OpenBLAS_jll v0.3.34+0 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.8+0 [efcefdf7] + PCRE2_jll v10.47.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.2+0 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.70.0+0 [3f19e933] + p7zip_jll v17.8.2+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Installation completed after 15.6s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompiling project... 138.9 s ✓ Clarabel 14.9 s ✓ Polyhedra 36.6 s ✓ Clp 10.0 s ✓ Cbc 19.3 s ✓ COBREXA julia: /source/src/gc-stock.c:830: jl_gc_small_alloc_inner: Assertion `__extension__ ({ __auto_type __atomic_load_ptr = (&ptls->gc_state); __typeof__ (*__atomic_load_ptr) __atomic_load_tmp; __atomic_load (__atomic_load_ptr, &__atomic_load_tmp, (memory_order_relaxed)); __atomic_load_tmp; }) == 0' failed. [113] signal 6 (-6): Aborted in expression starting at /home/pkgeval/.julia/packages/HiGHS/oND6G/src/HiGHS.jl:37 unknown function (ip: 0x76f20fd92ebc) at /lib/x86_64-linux-gnu/libc.so.6 gsignal at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) abort at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x76f20fd2e394) at /lib/x86_64-linux-gnu/libc.so.6 __assert_fail at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) jl_gc_small_alloc_inner at /source/src/gc-stock.c:830:5 jl_gc_small_alloc_noinline at /source/src/gc-stock.c:892:12 [inlined] jl_gc_alloc_ at /source/src/gc-stock.c:906:13 ijl_alloc_string at /source/src/array.c:295:22 _string_n at ./strings/string.jl:184:0 [inlined] _string at ./strings/substring.jl:271:0 (pc: 52) string at ./strings/substring.jl:252:0 [inlined] * at ./strings/basic.jl:261:0 (pc: 7) disable_sigint at ./c.jl:150:0 (pc: 1) optimize! at /home/pkgeval/.julia/packages/HiGHS/oND6G/src/MOI_wrapper.jl:2304:0 (pc: 250) optimize! at /home/pkgeval/.julia/packages/MathOptInterface/13jDB/src/Bridges/bridge_optimizer.jl:367:0 [inlined] optimize! at /home/pkgeval/.julia/packages/MathOptInterface/13jDB/src/MathOptInterface.jl:122:0 [inlined] optimize! at /home/pkgeval/.julia/packages/MathOptInterface/13jDB/src/Utilities/cachingoptimizer.jl:370:0 (pc: 118) unknown function (ip: 0x76f19c495c92) at (unknown file) _jl_invoke at /source/src/gf.c:4584:23 [inlined] ijl_apply_generic at /source/src/gf.c:4832:12 macro expansion at /home/pkgeval/.julia/packages/HiGHS/oND6G/src/HiGHS.jl:79:0 [inlined] macro expansion at /home/pkgeval/.julia/packages/PrecompileTools/QUxvR/src/workloads.jl:70:0 [inlined] macro expansion at /home/pkgeval/.julia/packages/HiGHS/oND6G/src/HiGHS.jl:38:0 [inlined] macro expansion at /home/pkgeval/.julia/packages/PrecompileTools/QUxvR/src/workloads.jl:118:0 [inlined] top-level scope at /home/pkgeval/.julia/packages/HiGHS/oND6G/src/HiGHS.jl:115:0 (pc: 303) jl_invoke_oneshot at /source/src/gf.c:4625:23 ijl_eval_thunk at /source/src/toplevel.c:764:18 jl_toplevel_eval_flex at /source/src/toplevel.c:716:26 jl_eval_toplevel_stmts at /source/src/toplevel.c:601:15 jl_eval_module_expr at /source/src/toplevel.c:266:5 [inlined] jl_toplevel_eval_flex at /source/src/toplevel.c:669:27 jl_eval_toplevel_stmts at /source/src/toplevel.c:601:15 jl_toplevel_eval_flex at /source/src/toplevel.c:688:27 ijl_toplevel_eval at /source/src/toplevel.c:786:12 ijl_toplevel_eval_in at /source/src/toplevel.c:831:13 eval at ./boot.jl:618:0 (pc: 1) include_string at ./loading.jl:3258:0 (pc: 140) _jl_invoke at /source/src/gf.c:4584:23 [inlined] ijl_apply_generic at /source/src/gf.c:4832:12 _include at ./loading.jl:3320:0 (pc: 123) include at ./Base.jl:334:0 (pc: 1) include_package_for_output at ./loading.jl:3431:0 (pc: 416) jfptr_include_package_for_output_1.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4584:23 [inlined] ijl_apply_generic at /source/src/gf.c:4832:12 jl_apply at /source/src/julia.h:2533:12 [inlined] do_call at /source/src/interpreter.c:123:26 eval_value at /source/src/interpreter.c:259:16 eval_stmt_value at /source/src/interpreter.c:194:23 [inlined] eval_body at /source/src/interpreter.c:829:21 jl_interpret_toplevel_thunk at /source/src/interpreter.c:1052:21 ijl_eval_thunk at /source/src/toplevel.c:772:18 jl_toplevel_eval_flex at /source/src/toplevel.c:716:26 jl_eval_toplevel_stmts at /source/src/toplevel.c:601:15 jl_toplevel_eval_flex at /source/src/toplevel.c:688:27 ijl_toplevel_eval at /source/src/toplevel.c:786:12 ijl_toplevel_eval_in at /source/src/toplevel.c:831:13 eval at ./boot.jl:618:0 (pc: 1) include_string at ./loading.jl:3258:0 (pc: 140) include_string at ./loading.jl:3268:0 [inlined] __script_entry_include_string at ./client.jl:104:0 [inlined] exec_options at ./client.jl:382:0 (pc: 900) _start at ./client.jl:695:0 (pc: 217) jfptr__start_0.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4584:23 [inlined] ijl_apply_generic at /source/src/gf.c:4832:12 jl_apply at /source/src/julia.h:2533:12 [inlined] true_main at /source/src/jlapi.c:989:29 jl_repl_entrypoint at /source/src/jlapi.c:1156:15 main at /source/cli/loader_exe.c:117:15 unknown function (ip: 0x76f20fd2f249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S Allocations: 14300482 (Pool: 14299916; Big: 566); GC: 9 ✗ HiGHS 11.5 s ✓ Polyhedra → PolyhedraJuMPExt 11.0 s ✓ CDDLib ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("87dc4568-4c63-4d18-b0c0-bb2238e4078b"), "HiGHS") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0) Stacktrace: [1] error(s::String) @ Base error.jl:56 [2] require(into::Module, mod::Symbol) @ Base loading.jl:2661 [inlined] [3] top-level scope @ ~/.julia/packages/sparseQFCA/VIdqW/src/sparseQFCA.jl:11 [4] include(mod::Module, _path::String) @ Base Base.jl:334 [5] top-level scope @ stdin:5 in expression starting at /home/pkgeval/.julia/packages/sparseQFCA/VIdqW/src/sparseQFCA.jl:9 in expression starting at stdin:5 ✗ sparseQFCA 7 dependencies successfully precompiled in 290 seconds. 138 already precompiled. 2 dependencies had output during precompilation: ┌ sparseQFCA │ ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("87dc4568-4c63-4d18-b0c0-bb2238e4078b"), "HiGHS") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0) │ Stacktrace: │ [1] error(s::String) │ @ Base error.jl:56 │ [2] require(into::Module, mod::Symbol) │ @ Base loading.jl:2661 [inlined] │ [3] top-level scope │ @ ~/.julia/packages/sparseQFCA/VIdqW/src/sparseQFCA.jl:11 │ [4] include(mod::Module, _path::String) │ @ Base Base.jl:334 │ [5] top-level scope │ @ stdin:5 │ in expression starting at /home/pkgeval/.julia/packages/sparseQFCA/VIdqW/src/sparseQFCA.jl:9 │ in expression starting at stdin:5 └ ┌ HiGHS │ julia: /source/src/gc-stock.c:830: jl_gc_small_alloc_inner: Assertion `__extension__ ({ __auto_type __atomic_load_ptr = (&ptls->gc_state); __typeof__ (*__atomic_load_ptr) __atomic_load_tmp; __atomic_load (__atomic_load_ptr, &__atomic_load_tmp, (memory_order_relaxed)); __atomic_load_tmp; }) == 0' failed. │ │ [113] signal 6 (-6): Aborted │ in expression starting at /home/pkgeval/.julia/packages/HiGHS/oND6G/src/HiGHS.jl:37 │ unknown function (ip: 0x76f20fd92ebc) at /lib/x86_64-linux-gnu/libc.so.6 │ gsignal at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) │ abort at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) │ unknown function (ip: 0x76f20fd2e394) at /lib/x86_64-linux-gnu/libc.so.6 │ __assert_fail at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) │ jl_gc_small_alloc_inner at /source/src/gc-stock.c:830:5 │ jl_gc_small_alloc_noinline at /source/src/gc-stock.c:892:12 [inlined] │ jl_gc_alloc_ at /source/src/gc-stock.c:906:13 │ ijl_alloc_string at /source/src/array.c:295:22 │ _string_n at ./strings/string.jl:184:0 [inlined] │ _string at ./strings/substring.jl:271:0 (pc: 52) │ string at ./strings/substring.jl:252:0 [inlined] │ * at ./strings/basic.jl:261:0 (pc: 7) │ disable_sigint at ./c.jl:150:0 (pc: 1) │ optimize! at /home/pkgeval/.julia/packages/HiGHS/oND6G/src/MOI_wrapper.jl:2304:0 (pc: 250) │ optimize! at /home/pkgeval/.julia/packages/MathOptInterface/13jDB/src/Bridges/bridge_optimizer.jl:367:0 [inlined] │ optimize! at /home/pkgeval/.julia/packages/MathOptInterface/13jDB/src/MathOptInterface.jl:122:0 [inlined] │ optimize! at /home/pkgeval/.julia/packages/MathOptInterface/13jDB/src/Utilities/cachingoptimizer.jl:370:0 (pc: 118) │ unknown function (ip: 0x76f19c495c92) at (unknown file) │ _jl_invoke at /source/src/gf.c:4584:23 [inlined] │ ijl_apply_generic at /source/src/gf.c:4832:12 │ macro expansion at /home/pkgeval/.julia/packages/HiGHS/oND6G/src/HiGHS.jl:79:0 [inlined] │ macro expansion at /home/pkgeval/.julia/packages/PrecompileTools/QUxvR/src/workloads.jl:70:0 [inlined] │ macro expansion at /home/pkgeval/.julia/packages/HiGHS/oND6G/src/HiGHS.jl:38:0 [inlined] │ macro expansion at /home/pkgeval/.julia/packages/PrecompileTools/QUxvR/src/workloads.jl:118:0 [inlined] │ top-level scope at /home/pkgeval/.julia/packages/HiGHS/oND6G/src/HiGHS.jl:115:0 (pc: 303) │ jl_invoke_oneshot at /source/src/gf.c:4625:23 │ ijl_eval_thunk at /source/src/toplevel.c:764:18 │ jl_toplevel_eval_flex at /source/src/toplevel.c:716:26 │ jl_eval_toplevel_stmts at /source/src/toplevel.c:601:15 │ jl_eval_module_expr at /source/src/toplevel.c:266:5 [inlined] │ jl_toplevel_eval_flex at /source/src/toplevel.c:669:27 │ jl_eval_toplevel_stmts at /source/src/toplevel.c:601:15 │ jl_toplevel_eval_flex at /source/src/toplevel.c:688:27 │ ijl_toplevel_eval at /source/src/toplevel.c:786:12 │ ijl_toplevel_eval_in at /source/src/toplevel.c:831:13 │ eval at ./boot.jl:618:0 (pc: 1) │ include_string at ./loading.jl:3258:0 (pc: 140) │ _jl_invoke at /source/src/gf.c:4584:23 [inlined] │ ijl_apply_generic at /source/src/gf.c:4832:12 │ _include at ./loading.jl:3320:0 (pc: 123) │ include at ./Base.jl:334:0 (pc: 1) │ include_package_for_output at ./loading.jl:3431:0 (pc: 416) │ jfptr_include_package_for_output_1.1 at /opt/julia/lib/julia/sys.so (unknown line) │ _jl_invoke at /source/src/gf.c:4584:23 [inlined] │ ijl_apply_generic at /source/src/gf.c:4832:12 │ jl_apply at /source/src/julia.h:2533:12 [inlined] │ do_call at /source/src/interpreter.c:123:26 │ eval_value at /source/src/interpreter.c:259:16 │ eval_stmt_value at /source/src/interpreter.c:194:23 [inlined] │ eval_body at /source/src/interpreter.c:829:21 │ jl_interpret_toplevel_thunk at /source/src/interpreter.c:1052:21 │ ijl_eval_thunk at /source/src/toplevel.c:772:18 │ jl_toplevel_eval_flex at /source/src/toplevel.c:716:26 │ jl_eval_toplevel_stmts at /source/src/toplevel.c:601:15 │ jl_toplevel_eval_flex at /source/src/toplevel.c:688:27 │ ijl_toplevel_eval at /source/src/toplevel.c:786:12 │ ijl_toplevel_eval_in at /source/src/toplevel.c:831:13 │ eval at ./boot.jl:618:0 (pc: 1) │ include_string at ./loading.jl:3258:0 (pc: 140) │ include_string at ./loading.jl:3268:0 [inlined] │ __script_entry_include_string at ./client.jl:104:0 [inlined] │ exec_options at ./client.jl:382:0 (pc: 900) │ _start at ./client.jl:695:0 (pc: 217) │ jfptr__start_0.1 at /opt/julia/lib/julia/sys.so (unknown line) │ _jl_invoke at /source/src/gf.c:4584:23 [inlined] │ ijl_apply_generic at /source/src/gf.c:4832:12 │ jl_apply at /source/src/julia.h:2533:12 [inlined] │ true_main at /source/src/jlapi.c:989:29 │ jl_repl_entrypoint at /source/src/jlapi.c:1156:15 │ main at /source/cli/loader_exe.c:117:15 │ unknown function (ip: 0x76f20fd2f249) at /lib/x86_64-linux-gnu/libc.so.6 │ __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) │ unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S │ Allocations: 14300482 (Pool: 14299916; Big: 566); GC: 9 └ ERROR: LoadError: The following 2 packages failed to precompile: sparseQFCA Failed to precompile sparseQFCA [077cf62c-ad2d-5edd-99ec-638372f8b004] to "/home/pkgeval/.julia/compiled/v1.14/sparseQFCA/jl_cjlHlV" (ProcessExited(1)). HiGHS Failed to precompile HiGHS [87dc4568-4c63-4d18-b0c0-bb2238e4078b] to "/home/pkgeval/.julia/compiled/v1.14/HiGHS/jl_5Eqsnf" (ProcessSignaled(6)). in expression starting at /PkgEval.jl/scripts/precompile.jl:34 Precompilation failed after 324.39s ################################################################################ # Testing # Testing sparseQFCA Status `/tmp/jl_XzBnrv/Project.toml` [5a4f3dfa] AbstractFBCModels v1.3.0 [3391f64e] CDDLib v0.10.3 [babc4406] COBREXA v2.9.1 ⌃ [9961bab8] Cbc v1.2.0 ⌅ [61c947e1] Clarabel v0.7.1 ⌃ [e2554f3b] Clp v1.2.2 [5ae59095] Colors v0.13.1 [8bb1440f] DelimitedFiles v1.9.1 [e2685f51] ECOS v1.1.3 [60bf3e95] GLPK v1.2.1 [f67ccb44] HDF5 v0.17.3 [87dc4568] HiGHS v1.25.0 ⌅ [033835bb] JLD2 v0.5.15 ⌅ [682c06a0] JSON v0.21.4 [475c1105] JSONFBCModels v1.1.0 [4076af6c] JuMP v1.31.2 [b8f27783] MathOptInterface v1.53.0 [3e8f9d1a] SBMLFBCModels v1.1.1 [c946c3f1] SCS v2.6.4 [077cf62c] sparseQFCA v2.3.0 [8ba89e20] Distributed v1.12.0 [37e2e46d] LinearAlgebra v1.14.0 [1a1011a3] SharedArrays v1.11.0 [2f01184e] SparseArrays v1.13.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_XzBnrv/Manifest.toml` [14f7f29c] AMD v0.5.3 [5a4f3dfa] AbstractFBCModels v1.3.0 [3391f64e] CDDLib v0.10.3 [fa961155] CEnum v0.5.0 [babc4406] COBREXA v2.9.1 ⌃ [9961bab8] Cbc v1.2.0 ⌅ [61c947e1] Clarabel v0.7.1 ⌃ [e2554f3b] Clp v1.2.2 [523fee87] CodecBzip2 v0.8.5 [944b1d66] CodecZlib v0.7.9 [3da002f7] ColorTypes v0.12.1 [5ae59095] Colors v0.13.1 [bbf7d656] CommonSubexpressions v0.3.1 [34da2185] Compat v4.18.1 [5515826b] ConstraintTrees v1.11.1 [187b0558] ConstructionBase v1.6.0 [864edb3b] DataStructures v0.19.6 [8bb1440f] DelimitedFiles v1.9.1 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.16.0 [ffbed154] DocStringExtensions v0.9.5 [e2685f51] ECOS v1.1.3 [e2ba6199] ExprTools v0.1.11 [5789e2e9] FileIO v1.20.0 ⌅ [53c48c17] FixedPointNumbers v0.8.6 [f6369f11] ForwardDiff v1.4.5 [60bf3e95] GLPK v1.2.1 ⌅ [14197337] GenericLinearAlgebra v0.3.19 [f67ccb44] HDF5 v0.17.3 [076d061b] HashArrayMappedTries v0.2.0 [87dc4568] HiGHS v1.25.0 [615f187c] IfElse v0.1.1 [92d709cd] IrrationalConstants v0.2.6 ⌅ [033835bb] JLD2 v0.5.15 [692b3bcd] JLLWrappers v1.8.0 ⌅ [682c06a0] JSON v0.21.4 [475c1105] JSONFBCModels v1.1.0 [4076af6c] JuMP v1.31.2 [2ab3a3ac] LogExpFunctions v1.0.1 [3da0fdf6] MPIPreferences v0.1.12 [1914dd2f] MacroTools v0.5.16 [8c4f8055] MathOptIIS v0.2.0 [b8f27783] MathOptInterface v1.53.0 [d8a4904e] MutableArithmetics v1.8.0 [77ba4419] NaNMath v1.1.4 ⌅ [bac558e1] OrderedCollections v1.8.2 ⌅ [69de0a69] Parsers v2.8.7 [3bbf5609] PikaParser v0.6.1 [67491407] Polyhedra v0.8.1 [aea7be01] PrecompileTools v1.3.4 [21216c6a] Preferences v1.5.2 [bfc457fd] QDLDL v0.4.1 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [e5567a89] SBML v1.6.0 [3e8f9d1a] SBMLFBCModels v1.1.1 [c946c3f1] SCS v2.6.4 [7e506255] ScopedValues v1.6.2 [66db9d55] SnoopPrecompile v1.0.3 [276daf66] SpecialFunctions v2.9.0 [860ef19b] StableRNGs v1.0.4 [90137ffa] StaticArrays v1.9.19 [1e83bf80] StaticArraysCore v1.4.4 [10745b16] Statistics v1.11.4 ⌅ [a759f4b9] TimerOutputs v0.5.29 [3bb67fe8] TranscodingStreams v0.11.3 [1986cc42] Unitful v1.28.0 [077cf62c] sparseQFCA v2.3.0 [ae81ac8f] ASL_jll v0.1.3+0 [6e34b625] Bzip2_jll v1.0.9+0 ⌅ [38041ee0] Cbc_jll v200.1000.800+0 ⌅ [3830e938] Cgl_jll v0.6000.600+0 ⌅ [06985876] Clp_jll v100.1700.700+1 ⌅ [be027038] CoinUtils_jll v200.1100.600+0 [c2c64177] ECOS_jll v200.0.800+0 ⌅ [e8aa6df9] GLPK_jll v5.0.1+1 ⌅ [0234f1f7] HDF5_jll v1.14.3+3 [8fd58aa0] HiGHS_jll v1.15.1+1 [e33a78d0] Hwloc_jll v2.14.0+0 [1d63c593] LLVMOpenMP_jll v22.1.7+0 [94ce4f54] Libiconv_jll v1.18.0+0 [d00139f3] METIS_jll v5.1.3+0 [7cb0a576] MPICH_jll v5.0.1+0 [f1f71cc9] MPItrampoline_jll v5.5.6+0 [d7ed1dd3] MUMPS_seq_jll v500.900.100+0 [9237b28f] MicrosoftMPI_jll v10.1.4+3 [656ef2d0] OpenBLAS32_jll v0.3.34+0 ⌅ [fe0851c0] OpenMPI_jll v4.1.9+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 ⌅ [7da25872] Osi_jll v0.10800.700+0 [bb12108a] SBML_jll v5.21.0+0 [f4f2fc5b] SCS_jll v300.200.1100+0 ⌅ [02c8fc9c] XML2_jll v2.13.9+0 [a65dc6b1] Xorg_libpciaccess_jll v0.19.0+0 [f07e07eb] cddlib_jll v0.94.15+0 [477f73a3] libaec_jll v1.1.7+0 [0dad84c5] ArgTools v1.2.0 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.12.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v1.0.0 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.14.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.14.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.13.0 [9e88b42a] Serialization v1.11.0 [1a1011a3] SharedArrays v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.13.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.5.7+0 [781609d7] GMP_jll v6.3.0+4 [deac9b47] LibCURL_jll v8.21.0+0 [e37daf67] LibGit2_jll v1.9.7+0 [29816b5a] LibSSH2_jll v1.11.104+0 [14a3606d] MozillaCACerts_jll v2026.8.13 [4536629a] OpenBLAS_jll v0.3.34+0 [05823500] OpenLibm_jll v0.8.7+0 [458c3c95] OpenSSL_jll v3.5.8+0 [efcefdf7] PCRE2_jll v10.47.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.2+0 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.70.0+0 [3f19e933] p7zip_jll v17.8.2+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... #-------------------------------------------------------------------------------------------# Number of Proccess : 8 Number of Workers : 7 julia: /source/src/gc-stock.c:830: jl_gc_small_alloc_inner: Assertion `__extension__ ({ __auto_type __atomic_load_ptr = (&ptls->gc_state); __typeof__ (*__atomic_load_ptr) __atomic_load_tmp; __atomic_load (__atomic_load_ptr, &__atomic_load_tmp, (memory_order_relaxed)); __atomic_load_tmp; }) == 0' failed. [211] signal 6 (-6): Aborted in expression starting at /home/pkgeval/.julia/packages/HiGHS/oND6G/src/HiGHS.jl:37 unknown function (ip: 0x7e4ba8631ebc) at /lib/x86_64-linux-gnu/libc.so.6 gsignal at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) abort at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x7e4ba85cd394) at /lib/x86_64-linux-gnu/libc.so.6 __assert_fail at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) jl_gc_small_alloc_inner at /source/src/gc-stock.c:830:5 jl_gc_small_alloc_noinline at /source/src/gc-stock.c:892:12 [inlined] jl_gc_alloc_ at /source/src/gc-stock.c:906:13 ijl_alloc_string at /source/src/array.c:295:22 _string_n at ./strings/string.jl:184:0 [inlined] _string at ./strings/substring.jl:271:0 (pc: 52) string at ./strings/substring.jl:252:0 [inlined] * at ./strings/basic.jl:261:0 (pc: 7) disable_sigint at ./c.jl:150:0 (pc: 1) optimize! at /home/pkgeval/.julia/packages/HiGHS/oND6G/src/MOI_wrapper.jl:2304:0 (pc: 250) optimize! at /home/pkgeval/.julia/packages/MathOptInterface/13jDB/src/Bridges/bridge_optimizer.jl:367:0 [inlined] optimize! at /home/pkgeval/.julia/packages/MathOptInterface/13jDB/src/MathOptInterface.jl:122:0 [inlined] optimize! at /home/pkgeval/.julia/packages/MathOptInterface/13jDB/src/Utilities/cachingoptimizer.jl:370:0 (pc: 118) unknown function (ip: 0x7e4b37905c92) at (unknown file) _jl_invoke at /source/src/gf.c:4584:23 [inlined] ijl_apply_generic at /source/src/gf.c:4832:12 macro expansion at /home/pkgeval/.julia/packages/HiGHS/oND6G/src/HiGHS.jl:79:0 [inlined] macro expansion at /home/pkgeval/.julia/packages/PrecompileTools/QUxvR/src/workloads.jl:70:0 [inlined] macro expansion at /home/pkgeval/.julia/packages/HiGHS/oND6G/src/HiGHS.jl:38:0 [inlined] macro expansion at /home/pkgeval/.julia/packages/PrecompileTools/QUxvR/src/workloads.jl:118:0 [inlined] top-level scope at /home/pkgeval/.julia/packages/HiGHS/oND6G/src/HiGHS.jl:115:0 (pc: 303) jl_invoke_oneshot at /source/src/gf.c:4625:23 ijl_eval_thunk at /source/src/toplevel.c:764:18 jl_toplevel_eval_flex at /source/src/toplevel.c:716:26 jl_eval_toplevel_stmts at /source/src/toplevel.c:601:15 jl_eval_module_expr at /source/src/toplevel.c:266:5 [inlined] jl_toplevel_eval_flex at /source/src/toplevel.c:669:27 jl_eval_toplevel_stmts at /source/src/toplevel.c:601:15 jl_toplevel_eval_flex at /source/src/toplevel.c:688:27 ijl_toplevel_eval at /source/src/toplevel.c:786:12 ijl_toplevel_eval_in at /source/src/toplevel.c:831:13 eval at ./boot.jl:618:0 (pc: 1) include_string at ./loading.jl:3258:0 (pc: 140) _jl_invoke at /source/src/gf.c:4584:23 [inlined] ijl_apply_generic at /source/src/gf.c:4832:12 _include at ./loading.jl:3320:0 (pc: 123) include at ./Base.jl:334:0 (pc: 1) include_package_for_output at ./loading.jl:3431:0 (pc: 416) jfptr_include_package_for_output_1.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4584:23 [inlined] ijl_apply_generic at /source/src/gf.c:4832:12 jl_apply at /source/src/julia.h:2533:12 [inlined] do_call at /source/src/interpreter.c:123:26 eval_value at /source/src/interpreter.c:259:16 eval_stmt_value at /source/src/interpreter.c:194:23 [inlined] eval_body at /source/src/interpreter.c:829:21 jl_interpret_toplevel_thunk at /source/src/interpreter.c:1052:21 ijl_eval_thunk at /source/src/toplevel.c:772:18 jl_toplevel_eval_flex at /source/src/toplevel.c:716:26 jl_eval_toplevel_stmts at /source/src/toplevel.c:601:15 jl_toplevel_eval_flex at /source/src/toplevel.c:688:27 ijl_toplevel_eval at /source/src/toplevel.c:786:12 ijl_toplevel_eval_in at /source/src/toplevel.c:831:13 eval at ./boot.jl:618:0 (pc: 1) include_string at ./loading.jl:3258:0 (pc: 140) include_string at ./loading.jl:3268:0 [inlined] __script_entry_include_string at ./client.jl:104:0 [inlined] exec_options at ./client.jl:382:0 (pc: 900) _start at ./client.jl:695:0 (pc: 217) jfptr__start_0.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4584:23 [inlined] ijl_apply_generic at /source/src/gf.c:4832:12 jl_apply at /source/src/julia.h:2533:12 [inlined] true_main at /source/src/jlapi.c:989:29 jl_repl_entrypoint at /source/src/jlapi.c:1156:15 main at /source/cli/loader_exe.c:117:15 unknown function (ip: 0x7e4ba85ce249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S Allocations: 12922662 (Pool: 12922103; Big: 559); GC: 8 1 dependency had output during precompilation: ┌ HiGHS │ [Output was shown above] └ ERROR: LoadError: The following 1 package failed to precompile: HiGHS Failed to precompile HiGHS [87dc4568-4c63-4d18-b0c0-bb2238e4078b] to "/home/pkgeval/.julia/compiled/v1.14/HiGHS/jl_drK5n3" (ProcessSignaled(6)). in expression starting at /home/pkgeval/.julia/packages/sparseQFCA/VIdqW/test/runtests.jl:16 Testing failed after 109.01s ERROR: LoadError: Package sparseQFCA errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3283 [3] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:587 [4] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172 [5] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [6] test(pkg::String; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [inlined] [7] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:223 in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 PkgEval failed after 661.95s: package fails to precompile