Package evaluation to test NMF on Julia 1.14.0-DEV.3055 (7e75a8061a*) started at 2026-08-27T16:19:18.054 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 14.68s ################################################################################ # Installation # Installing NMF... Resolving package versions... Installed LogExpFunctions ───── v1.0.1 Installed DataStructures ────── v0.19.6 Installed DataAPI ───────────── v1.16.0 Installed Missings ──────────── v1.2.0 Installed Statistics ────────── v1.11.1 Installed NonNegLeastSquares ── v0.4.1 Installed Preferences ───────── v1.5.2 Installed PrecompileTools ───── v1.3.4 Installed SortingAlgorithms ─── v1.2.3 Installed StatsAPI ──────────── v1.8.0 Installed IrrationalConstants ─ v0.2.6 Installed AliasTables ───────── v1.1.3 Installed StatsBase ─────────── v0.34.13 Installed OrderedCollections ── v2.0.1 Installed NMF ───────────────── v1.1.0 Installed DocStringExtensions ─ v0.9.5 Installed PtrArrays ─────────── v1.4.0 Updating `~/.julia/environments/v1.14/Project.toml` [6ef6ca0d] + NMF v1.1.0 Updating `~/.julia/environments/v1.14/Manifest.toml` [66dad0bd] + AliasTables v1.1.3 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.19.6 [ffbed154] + DocStringExtensions v0.9.5 [92d709cd] + IrrationalConstants v0.2.6 [2ab3a3ac] + LogExpFunctions v1.0.1 [e1d29d7a] + Missings v1.2.0 [6ef6ca0d] + NMF v1.1.0 [b7351bd1] + NonNegLeastSquares v0.4.1 [bac558e1] + OrderedCollections v2.0.1 [aea7be01] + PrecompileTools v1.3.4 [21216c6a] + Preferences v1.5.2 [43287f4e] + PtrArrays v1.4.0 [a2af1166] + SortingAlgorithms v1.2.3 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 [2913bbd2] + StatsBase v0.34.13 [56f22d72] + Artifacts v1.11.0 [ade2ca70] + Dates v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.14.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.13.0 [9e88b42a] + Serialization v1.11.0 [2f01184e] + SparseArrays v1.13.0 [fa267f1f] + TOML v1.0.3 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.5.7+0 [4536629a] + OpenBLAS_jll v0.3.34+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [8e850b90] + libblastrampoline_jll v5.15.0+0 Installation completed after 1.99s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling project... 3.6 s ✓ TestEnv 1 dependency successfully precompiled in 4 seconds. 27 already precompiled. Precompiling package dependencies... Precompiling project... 0.7 s ✓ ANSIColoredPrinters 0.6 s ✓ Statistics 0.4 s ✓ DataAPI 1.6 s ✓ IrrationalConstants 0.5 s ✓ StatsAPI 0.5 s ✓ LazilyInitializedFields 0.8 s ✓ OrderedCollections 0.7 s ✓ DocStringExtensions 0.8 s ✓ AbstractTrees 1.2 s ✓ OffsetArrays 0.5 s ✓ PtrArrays 0.8 s ✓ TranscodingStreams 0.4 s ✓ IOCapture 1.4 s ✓ NonNegLeastSquares 1.3 s ✓ StructUtils 0.6 s ✓ Compat 0.9 s ✓ Preferences 1.1 s ✓ Statistics → SparseArraysExt 0.6 s ✓ Missings 3.8 s ✓ RegistryInstances 2.5 s ✓ DataStructures 0.8 s ✓ LogExpFunctions 1.1 s ✓ MarkdownAST 0.5 s ✓ AliasTables 0.5 s ✓ CodecZlib 0.4 s ✓ Compat → CompatLinearAlgebraExt 1.1 s ✓ JLLWrappers 0.7 s ✓ PrecompileTools 0.6 s ✓ SortingAlgorithms 4.3 s ✓ Aqua 1.2 s ✓ Libiconv_jll 0.8 s ✓ Git_LFS_jll 1.0 s ✓ OpenSSH_jll 0.9 s ✓ Expat_jll 8.0 s ✓ Parsers 33.0 s ✓ ExplicitImports 3.4 s ✓ StatsBase 1.2 s ✓ Git_jll 6.6 s ✓ JSON 19.9 s ✓ NMF 1.2 s ✓ Git 40.0 s ✓ Documenter 42 dependencies successfully precompiled in 149 seconds. 34 already precompiled. Precompilation completed after 174.2s ################################################################################ # Testing # Testing NMF Status `/tmp/jl_z4XJdD/Project.toml` [4c88cf16] Aqua v0.8.16 [e30172f5] Documenter v1.17.0 [7d51a73a] ExplicitImports v1.15.0 [6ef6ca0d] NMF v1.1.0 [b7351bd1] NonNegLeastSquares v0.4.1 [6fe1bfb0] OffsetArrays v1.17.0 [aea7be01] PrecompileTools v1.3.4 [10745b16] Statistics v1.11.1 [2913bbd2] StatsBase v0.34.13 [37e2e46d] LinearAlgebra v1.14.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_z4XJdD/Manifest.toml` [a4c015fc] ANSIColoredPrinters v0.0.1 [1520ce14] AbstractTrees v0.4.5 [66dad0bd] AliasTables v1.1.3 [4c88cf16] Aqua v0.8.16 [944b1d66] CodecZlib v0.7.9 [34da2185] Compat v4.18.1 [9a962f9c] DataAPI v1.16.0 [864edb3b] DataStructures v0.19.6 [ffbed154] DocStringExtensions v0.9.5 [e30172f5] Documenter v1.17.0 [7d51a73a] ExplicitImports v1.15.0 [d7ba0133] Git v1.5.0 [b5f81e59] IOCapture v1.0.0 [92d709cd] IrrationalConstants v0.2.6 [692b3bcd] JLLWrappers v1.8.0 [682c06a0] JSON v1.7.1 [0e77f7df] LazilyInitializedFields v1.3.0 [2ab3a3ac] LogExpFunctions v1.0.1 [d0879d2d] MarkdownAST v0.1.3 [e1d29d7a] Missings v1.2.0 [6ef6ca0d] NMF v1.1.0 [b7351bd1] NonNegLeastSquares v0.4.1 [6fe1bfb0] OffsetArrays v1.17.0 [bac558e1] OrderedCollections v2.0.1 ⌅ [69de0a69] Parsers v2.8.7 [aea7be01] PrecompileTools v1.3.4 [21216c6a] Preferences v1.5.2 [43287f4e] PtrArrays v1.4.0 [2792f1a3] RegistryInstances v0.1.0 [a2af1166] SortingAlgorithms v1.2.3 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.8.0 [2913bbd2] StatsBase v0.34.13 [ec057cc2] StructUtils v2.8.5 [3bb67fe8] TranscodingStreams v0.11.3 [2e619515] Expat_jll v2.8.3+0 [020c3dae] Git_LFS_jll v3.7.1+0 [f8c6e375] Git_jll v2.55.0+0 [94ce4f54] Libiconv_jll v1.18.0+0 [9bd350c2] OpenSSH_jll v10.5.1+0 [0dad84c5] ArgTools v1.2.0 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0 [b27032c2] LibCURL v1.0.0 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.14.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.14.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.13.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.13.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.5.7+0 [deac9b47] LibCURL_jll v8.21.0+0 [e37daf67] LibGit2_jll v1.9.7+0 [29816b5a] LibSSH2_jll v1.11.104+0 [14a3606d] MozillaCACerts_jll v2026.8.13 [4536629a] OpenBLAS_jll v0.3.34+0 [458c3c95] OpenSSL_jll v3.5.8+0 [efcefdf7] PCRE2_jll v10.47.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.2+0 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.70.0+0 [3f19e933] p7zip_jll v17.8.2+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Running tests: ┌ Warning: Unable to determine HTML(edit_link = ...) from remote HEAD branch, defaulting to "master". │ Calling `git remote` failed with an exception. Set JULIA_DEBUG=Documenter to see the error. │ Unless this is due to a configuration error, the relevant variable should be set explicitly. └ @ Documenter ~/.julia/packages/Documenter/AXNMp/src/utilities/utilities.jl:719 [ Info: SetupBuildDirectory: setting up build directory. [ Info: Doctest: running doctests. [ Info: Skipped ExpandTemplates step (doctest only). [ Info: Skipped CrossReferences step (doctest only). [ Info: Skipped CheckDocument step (doctest only). [ Info: Skipped Populate step (doctest only). [ Info: Skipped RenderDocument step (doctest only). alspgrad: Test Failed at /home/pkgeval/.julia/packages/NMF/cgxd7/test/alspgrad.jl:13 Expression: ≈(H, Hg, atol = eps(T) ^ (1 / 4)) Evaluated: [0.5597419342315023 0.5238945092276178 … 0.5350608542123845 0.6088962286541452; 0.09576326030652127 0.5887931943949282 … 0.5748637046635784 0.7672050676330551; 0.0854370981411553 0.32183765042618107 … 0.9929348239182724 0.7762796208116468] ≈ [0.3 1.0 … 0.0 0.0; 1.0 0.3 … 0.3 1.0; 0.0 0.0 … 1.0 0.3] (atol=0.0001220703125) Stacktrace: [1] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:784 [inlined] [2] macro expansion @ ~/.julia/packages/NMF/cgxd7/test/alspgrad.jl:13 [inlined] [3] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2247 [inlined] [4] top-level scope @ ~/.julia/packages/NMF/cgxd7/test/alspgrad.jl:5 alspgrad: Test Failed at /home/pkgeval/.julia/packages/NMF/cgxd7/test/alspgrad.jl:20 Expression: ≈(W, Wg, atol = eps(T) ^ (1 / 4)) Evaluated: [0.6468347824303267 0.17222579864838994 0.3139643805870711; 0.4505534238624046 0.18562894608447233 0.11294513451483834; … ; 0.4391374775462512 0.4813609302653188 0.9423853129088949; 0.43837911048406897 0.07092599829352986 0.9768968959224557] ≈ [0.3 1.0 0.0; 1.0 0.3 0.0; … ; 0.0 0.3 1.0; 0.0 1.0 0.3] (atol=0.0001220703125) Stacktrace: [1] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:784 [inlined] [2] macro expansion @ ~/.julia/packages/NMF/cgxd7/test/alspgrad.jl:20 [inlined] [3] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2247 [inlined] [4] top-level scope @ ~/.julia/packages/NMF/cgxd7/test/alspgrad.jl:5 alspgrad: Test Failed at /home/pkgeval/.julia/packages/NMF/cgxd7/test/alspgrad.jl:13 Expression: ≈(H, Hg, atol = eps(T) ^ (1 / 4)) Evaluated: Float32[0.34814095 0.052817166 … 0.8489977 0.73233205; 0.3558995 0.96413857 … 0.16651213 0.7482132; 0.961916 0.2931192 … 0.78791857 0.15436697] ≈ Float32[0.3 1.0 … 0.0 0.0; 1.0 0.3 … 0.3 1.0; 0.0 0.0 … 1.0 0.3] (atol=0.018581361171917516) Stacktrace: [1] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:784 [inlined] [2] macro expansion @ ~/.julia/packages/NMF/cgxd7/test/alspgrad.jl:13 [inlined] [3] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2247 [inlined] [4] top-level scope @ ~/.julia/packages/NMF/cgxd7/test/alspgrad.jl:5 alspgrad: Test Failed at /home/pkgeval/.julia/packages/NMF/cgxd7/test/alspgrad.jl:20 Expression: ≈(W, Wg, atol = eps(T) ^ (1 / 4)) Evaluated: Float32[0.9770876 0.3552183 0.65551263; 0.5938519 0.043566823 0.73579603; … ; 0.18245775 0.46587265 0.9342934; 0.07239908 0.666709 0.28430355] ≈ Float32[0.3 1.0 0.0; 1.0 0.3 0.0; … ; 0.0 0.3 1.0; 0.0 1.0 0.3] (atol=0.018581361171917516) Stacktrace: [1] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:784 [inlined] [2] macro expansion @ ~/.julia/packages/NMF/cgxd7/test/alspgrad.jl:20 [inlined] [3] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2247 [inlined] [4] top-level scope @ ~/.julia/packages/NMF/cgxd7/test/alspgrad.jl:5 interf: Test Failed at /home/pkgeval/.julia/packages/NMF/cgxd7/test/interf.jl:35 Expression: any(W .!= ret.W) Evaluated: any(Bool[0 0 0; 0 0 0; … ; 0 0 0; 0 0 0]) Stacktrace: [1] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:784 [inlined] [2] macro expansion @ ~/.julia/packages/NMF/cgxd7/test/interf.jl:35 [inlined] [3] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2247 [inlined] [4] top-level scope @ ~/.julia/packages/NMF/cgxd7/test/interf.jl:2 interf: Test Failed at /home/pkgeval/.julia/packages/NMF/cgxd7/test/interf.jl:35 Expression: any(W .!= ret.W) Evaluated: any(Bool[0 0 0; 0 0 0; … ; 0 0 0; 0 0 0]) Stacktrace: [1] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:784 [inlined] [2] macro expansion @ ~/.julia/packages/NMF/cgxd7/test/interf.jl:35 [inlined] [3] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2247 [inlined] [4] top-level scope @ ~/.julia/packages/NMF/cgxd7/test/interf.jl:2 Test Summary: | Pass Fail Total Time All tests | 390 6 396 7m13.7s Aqua | 11 11 51.6s Doctests | 1 1 1m46.6s ExplicitImports | 7 7 46.5s generic axes | 50 50 1m36.3s utils | 15 15 2.6s initialization | 46 46 16.3s spa | 31 31 59.4s algorithm type hierarchy | 6 6 0.0s multupd | 85 85 5.8s alspgrad | 4 4 8 15.5s coorddesc | 4 4 1.5s greedycd | 40 40 3.6s interf | 28 2 30 8.5s verbose io redirection | 3 3 1.9s rng reproducibility | 8 8 4.8s Result construction | 7 7 0.7s Result show | 6 6 0.3s public bindings | 12 12 0.2s nnmf argument validation | 6 6 0.3s constructor argument validation | 20 20 0.1s RNG of the outermost testset: Xoshiro(0xd7d837706a7e3c18, 0xfa1c6d0fadd9ed4a, 0xa6f0734253d8363d, 0x940e43e8145510bc, 0x15439a43a598884b) ERROR: LoadError: Some tests did not pass: 390 passed, 6 failed, 0 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/NMF/cgxd7/test/runtests.jl:23 Testing failed after 451.85s ERROR: LoadError: Package NMF errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3283 [3] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:587 [4] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172 [5] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [6] test(pkg::String; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [inlined] [7] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:223 in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 PkgEval failed after 674.58s: package has test failures