Package evaluation to test MonteCarloX on Julia 1.14.0-DEV.3055 (7e75a8061a*) started at 2026-08-27T19:08:22.670 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 15.58s ################################################################################ # Installation # Installing MonteCarloX... Resolving package versions... Installed OrderedCollections ──── v2.0.1 Installed StatsBase ───────────── v0.34.13 Installed DataStructures ──────── v0.19.6 Installed MPICH_jll ───────────── v5.0.1+0 Installed PkgVersion ──────────── v0.3.3 Installed MicrosoftMPI_jll ────── v10.1.4+3 (no artifacts on this platform) Installed AliasTables ─────────── v1.1.3 Installed MPI ─────────────────── v0.20.27 Installed DataAPI ─────────────── v1.16.0 Installed MPIABI_jll ──────────── v1.0.0+0 Installed StatsAPI ────────────── v1.8.0 Installed Statistics ──────────── v1.11.1 Installed Xorg_libpciaccess_jll ─ v0.19.0+0 Installed PrecompileTools ─────── v1.3.4 Installed RecipesBase ─────────── v1.3.4 Installed Hwloc_jll ───────────── v2.14.0+0 Installed LogExpFunctions ─────── v1.0.1 Installed IrrationalConstants ─── v0.2.6 Installed OpenMPI_jll ─────────── v5.0.11+0 Installed PtrArrays ───────────── v1.4.0 Installed XML2_jll ────────────── v2.13.9+0 Installed Preferences ─────────── v1.5.2 Installed Missings ────────────── v1.2.0 Installed MonteCarloX ─────────── v0.3.0 Installed SortingAlgorithms ───── v1.2.3 Installed MPIPreferences ──────── v0.1.12 Installed Libiconv_jll ────────── v1.18.0+0 Installed JLLWrappers ─────────── v1.8.0 Installed MPItrampoline_jll ───── v5.5.6+0 Installed DocStringExtensions ─── v0.9.5 Installing 5 artifacts Installed artifact Xorg_libpciaccess 23.4 KiB Installed artifact Hwloc 3.0 MiB Installed artifact Libiconv 1022.9 KiB Installed artifact XML2 2.0 MiB Installed artifact MPICH 5.8 MiB Updating `~/.julia/environments/v1.14/Project.toml` [320e4f08] + MonteCarloX v0.3.0 Updating `~/.julia/environments/v1.14/Manifest.toml` [66dad0bd] + AliasTables v1.1.3 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.19.6 [ffbed154] + DocStringExtensions v0.9.5 [92d709cd] + IrrationalConstants v0.2.6 [692b3bcd] + JLLWrappers v1.8.0 [2ab3a3ac] + LogExpFunctions v1.0.1 [da04e1cc] + MPI v0.20.27 [3da0fdf6] + MPIPreferences v0.1.12 [e1d29d7a] + Missings v1.2.0 [320e4f08] + MonteCarloX v0.3.0 [bac558e1] + OrderedCollections v2.0.1 [eebad327] + PkgVersion v0.3.3 [aea7be01] + PrecompileTools v1.3.4 [21216c6a] + Preferences v1.5.2 [43287f4e] + PtrArrays v1.4.0 [3cdcf5f2] + RecipesBase v1.3.4 [a2af1166] + SortingAlgorithms v1.2.3 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 [2913bbd2] + StatsBase v0.34.13 [e33a78d0] + Hwloc_jll v2.14.0+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [b5ada748] + MPIABI_jll v1.0.0+0 [7cb0a576] + MPICH_jll v5.0.1+0 [f1f71cc9] + MPItrampoline_jll v5.5.6+0 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 [fe0851c0] + OpenMPI_jll v5.0.11+0 ⌅ [02c8fc9c] + XML2_jll v2.13.9+0 [a65dc6b1] + Xorg_libpciaccess_jll v0.19.0+0 [0dad84c5] + ArgTools v1.2.0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.12.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v1.0.0 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.14.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.14.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.13.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.13.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.5.7+0 [deac9b47] + LibCURL_jll v8.21.0+0 [e37daf67] + LibGit2_jll v1.9.7+0 [29816b5a] + LibSSH2_jll v1.11.104+0 [14a3606d] + MozillaCACerts_jll v2026.8.13 [4536629a] + OpenBLAS_jll v0.3.34+0 [458c3c95] + OpenSSL_jll v3.5.8+0 [efcefdf7] + PCRE2_jll v10.47.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.2+0 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.70.0+0 [3f19e933] + p7zip_jll v17.8.2+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 13.55s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling project... 4.6 s ✓ TestEnv 1 dependency successfully precompiled in 5 seconds. 27 already precompiled. Precompiling package dependencies... Precompiling project... 3.7 s ✓ MacroTools 0.5 s ✓ Reexport 0.8 s ✓ Statistics 0.5 s ✓ DataAPI 0.7 s ✓ ConstructionBase 1.8 s ✓ IrrationalConstants 0.9 s ✓ StatsAPI 0.9 s ✓ OrderedCollections 0.6 s ✓ InverseFunctions 0.5 s ✓ CompositionsBase 0.8 s ✓ DocStringExtensions 2.2 s ✓ Combinatorics 0.6 s ✓ ArgCheck 2.0 s ✓ FillArrays 0.5 s ✓ PtrArrays 2.2 s ✓ PDMats 1.2 s ✓ Preferences 4.4 s ✓ PkgVersion 1.5 s ✓ Statistics → SparseArraysExt 1.0 s ✓ Missings 1.2 s ✓ ConstructionBase → ConstructionBaseLinearAlgebraExt 4.1 s ✓ DataStructures 1.6 s ✓ InverseFunctions → InverseFunctionsTestExt 1.1 s ✓ InverseFunctions → InverseFunctionsDatesExt 0.5 s ✓ CompositionsBase → CompositionsBaseInverseFunctionsExt 1.1 s ✓ LogExpFunctions 1.3 s ✓ LogDensityProblems 2.0 s ✓ FillArrays → FillArraysSparseArraysExt 0.9 s ✓ FillArrays → FillArraysStatisticsExt 0.7 s ✓ AliasTables 1.9 s ✓ FillArrays → FillArraysPDMatsExt 1.7 s ✓ JLLWrappers 1.9 s ✓ MPIPreferences 1.1 s ✓ PrecompileTools 0.8 s ✓ SortingAlgorithms 1.8 s ✓ QuadGK 4.5 s ✓ Accessors 0.6 s ✓ LogExpFunctions → LogExpFunctionsInverseFunctionsExt 1.6 s ✓ Gamma 1.5 s ✓ Xorg_libpciaccess_jll 1.2 s ✓ Libiconv_jll 1.4 s ✓ Rmath_jll 0.9 s ✓ MicrosoftMPI_jll 1.1 s ✓ OpenSpecFun_jll 4.1 s ✓ MPItrampoline_jll 2.8 s ✓ RecipesBase 1.4 s ✓ CommonSolve 4.2 s ✓ StatsBase 2.3 s ✓ Accessors → LinearAlgebraExt 1.8 s ✓ Accessors → TestExt 2.1 s ✓ HypergeometricFunctions 1.2 s ✓ XML2_jll 1.8 s ✓ Rmath 5.5 s ✓ SpecialFunctions 1.9 s ✓ PDMats → StatsBaseExt 5.5 s ✓ Roots 1.6 s ✓ Hwloc_jll 2.2 s ✓ StatsFuns 1.2 s ✓ MPICH_jll 4.1 s ✓ OpenMPI_jll 4.2 s ✓ MPIABI_jll 0.9 s ✓ StatsFuns → StatsFunsInverseFunctionsExt 11.1 s ✓ MPI 10.3 s ✓ Distributions 7.7 s ✓ MonteCarloX 4.8 s ✓ Distributions → DistributionsTestExt 5.0 s ✓ HypothesisTests 7.5 s ✓ MonteCarloX → DistributionsExt 5.1 s ✓ MonteCarloX → LogDensityProblemsExt 69 dependencies successfully precompiled in 165 seconds. 36 already precompiled. Precompilation completed after 196.38s ################################################################################ # Testing # Testing MonteCarloX Status `/tmp/jl_Z8iSJw/Project.toml` [31c24e10] Distributions v0.25.131 [09f84164] HypothesisTests v0.11.8 [6fdf6af0] LogDensityProblems v2.2.0 [da04e1cc] MPI v0.20.27 [320e4f08] MonteCarloX v0.3.0 [3cdcf5f2] RecipesBase v1.3.4 [2913bbd2] StatsBase v0.34.13 [37e2e46d] LinearAlgebra v1.14.0 [9a3f8284] Random v1.11.0 [9e88b42a] Serialization v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_Z8iSJw/Manifest.toml` [7d9f7c33] Accessors v0.1.45 [66dad0bd] AliasTables v1.1.3 [dce04be8] ArgCheck v2.5.0 [861a8166] Combinatorics v1.1.0 [38540f10] CommonSolve v0.2.14 [a33af91c] CompositionsBase v0.1.2 [187b0558] ConstructionBase v1.6.0 [9a962f9c] DataAPI v1.16.0 [864edb3b] DataStructures v0.19.6 [31c24e10] Distributions v0.25.131 [ffbed154] DocStringExtensions v0.9.5 [1a297f60] FillArrays v1.17.0 [a0844989] Gamma v1.2.0 [34004b35] HypergeometricFunctions v0.3.30 [09f84164] HypothesisTests v0.11.8 [3587e190] InverseFunctions v0.1.17 [92d709cd] IrrationalConstants v0.2.6 [692b3bcd] JLLWrappers v1.8.0 [6fdf6af0] LogDensityProblems v2.2.0 [2ab3a3ac] LogExpFunctions v1.0.1 [da04e1cc] MPI v0.20.27 [3da0fdf6] MPIPreferences v0.1.12 [1914dd2f] MacroTools v0.5.16 [e1d29d7a] Missings v1.2.0 [320e4f08] MonteCarloX v0.3.0 [bac558e1] OrderedCollections v2.0.1 [90014a1f] PDMats v0.11.41 [eebad327] PkgVersion v0.3.3 [aea7be01] PrecompileTools v1.3.4 [21216c6a] Preferences v1.5.2 [43287f4e] PtrArrays v1.4.0 [1fd47b50] QuadGK v2.11.3 [3cdcf5f2] RecipesBase v1.3.4 [189a3867] Reexport v1.2.2 [79098fc4] Rmath v0.9.0 [f2b01f46] Roots v3.0.7 [a2af1166] SortingAlgorithms v1.2.3 [276daf66] SpecialFunctions v2.9.0 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.8.0 [2913bbd2] StatsBase v0.34.13 [4c63d2b9] StatsFuns v2.2.1 [e33a78d0] Hwloc_jll v2.14.0+0 [94ce4f54] Libiconv_jll v1.18.0+0 [b5ada748] MPIABI_jll v1.0.0+0 [7cb0a576] MPICH_jll v5.0.1+0 [f1f71cc9] MPItrampoline_jll v5.5.6+0 [9237b28f] MicrosoftMPI_jll v10.1.4+3 [fe0851c0] OpenMPI_jll v5.0.11+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.2+0 ⌅ [02c8fc9c] XML2_jll v2.13.9+0 [a65dc6b1] Xorg_libpciaccess_jll v0.19.0+0 [0dad84c5] ArgTools v1.2.0 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.12.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v1.0.0 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.14.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.14.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.13.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.13.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.5.7+0 [deac9b47] LibCURL_jll v8.21.0+0 [e37daf67] LibGit2_jll v1.9.7+0 [29816b5a] LibSSH2_jll v1.11.104+0 [14a3606d] MozillaCACerts_jll v2026.8.13 [4536629a] OpenBLAS_jll v0.3.34+0 [05823500] OpenLibm_jll v0.8.7+0 [458c3c95] OpenSSL_jll v3.5.8+0 [efcefdf7] PCRE2_jll v10.47.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.2+0 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.70.0+0 [3f19e933] p7zip_jll v17.8.2+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... ┌ Warning: NFoldRates is still experimental; the API may change. └ @ MonteCarloX ~/.julia/packages/MonteCarloX/B5hQG/src/event_handler/site_events.jl:44 ┌ Warning: SiteEvents is still experimental; the API may change. └ @ MonteCarloX ~/.julia/packages/MonteCarloX/B5hQG/src/event_handler/site_events.jl:84 ┌ Warning: NFoldRates is still experimental; the API may change. └ @ MonteCarloX ~/.julia/packages/MonteCarloX/B5hQG/src/event_handler/site_events.jl:44 ┌ Warning: SiteEvents is still experimental; the API may change. └ @ MonteCarloX ~/.julia/packages/MonteCarloX/B5hQG/src/event_handler/site_events.jl:84 ┌ Warning: SiteEvents is still experimental; the API may change. └ @ MonteCarloX ~/.julia/packages/MonteCarloX/B5hQG/src/event_handler/site_events.jl:84 ┌ Warning: ReactionEvents is still experimental; the API may change. └ @ MonteCarloX ~/.julia/packages/MonteCarloX/B5hQG/src/event_handler/reaction_events.jl:53 two-phase adaptation: Error During Test at /home/pkgeval/.julia/packages/MonteCarloX/B5hQG/test/test_step_size.jl:99 Test threw exception Expression: test_two_phase_adaptation() MethodError: no method matching reducedim1(::Matrix{Float64}, ::Matrix{Float64}) The function `reducedim1` exists, but no method is defined for this combination of argument types. Closest candidates are: reducedim1(::Any) @ Base reducedim.jl:1229 Stacktrace: [1] centralize_sumabs2!(R::Matrix{Float64}, A::Matrix{Float64}, means::Matrix{Float64}) @ Statistics ~/.julia/packages/Statistics/gbcbG/src/Statistics.jl:282 [2] varm!(R::Matrix{Float64}, A::Matrix{Float64}, m::Matrix{Float64}; corrected::Bool) @ Statistics ~/.julia/packages/Statistics/gbcbG/src/Statistics.jl:309 [3] _varm(A::Matrix{Float64}, m::Matrix{Float64}, corrected::Bool, region::Int64) @ Statistics ~/.julia/packages/Statistics/gbcbG/src/Statistics.jl:341 [4] varm(A::Matrix{Float64}, m::Matrix{Float64}; corrected::Bool, dims::Int64) @ Statistics ~/.julia/packages/Statistics/gbcbG/src/Statistics.jl:339 [inlined] [5] _var(A::Matrix{Float64}, corrected::Bool, mean::Nothing, dims::Int64) @ Statistics ~/.julia/packages/Statistics/gbcbG/src/Statistics.jl:386 [inlined] [6] var(A::Matrix{Float64}; corrected::Bool, mean::Nothing, dims::Int64) @ Statistics ~/.julia/packages/Statistics/gbcbG/src/Statistics.jl:380 [inlined] [7] _std(A::Matrix{Float64}, corrected::Bool, mean::Nothing, dims::Int64) @ Statistics ~/.julia/packages/Statistics/gbcbG/src/Statistics.jl:469 [8] std(A::Matrix{Float64}; corrected::Bool, mean::Nothing, dims::Int64) @ Statistics ~/.julia/packages/Statistics/gbcbG/src/Statistics.jl:461 [inlined] [9] test_two_phase_adaptation() @ Main ~/.julia/packages/MonteCarloX/B5hQG/test/test_step_size.jl:84 [10] top-level scope @ ~/.julia/packages/MonteCarloX/B5hQG/test/test_step_size.jl:89 [11] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2247 [inlined] [12] macro expansion @ ~/.julia/packages/MonteCarloX/B5hQG/test/test_step_size.jl:99 [inlined] [13] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2247 [inlined] [14] macro expansion @ ~/.julia/packages/MonteCarloX/B5hQG/test/test_step_size.jl:99 [inlined] [15] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:781 [inlined] [16] macro expansion @ ~/.julia/packages/MonteCarloX/B5hQG/test/test_step_size.jl:99 [inlined] Test Summary: | Pass Error Total Time MonteCarloX.jl | 186 1 187 2m32.1s Algorithm steps interface | 2 2 2.8s BinnedObject | 5 5 16.4s Checkpointing: checkpoint / restore | 5 5 11.2s Ensemble Constructors | 5 5 1.3s Event Handler | 4 4 23.9s EventRateTree (Fenwick) | 14 14 3.7s Kinetic Monte Carlo | 16 16 2.6s SiteEvents + NFoldRates (n-fold way) | 8 8 4.3s ReactionEvents (M/M/∞ queue) | 4 4 0.3s resample! (heat bath over the site interface) | 6 6 1.8s Measurements | 5 5 7.9s Parallel backends | 2 2 1.8s balance functions | 59 59 0.4s Markov Chain Monte Carlo | 4 4 4.6s Metropolis | 2 2 0.4s AdaptiveStep | 3 1 4 15.4s targets acceptance rate | 1 1 0.3s vector keeps ratios | 1 1 0.2s reset | 1 1 0.0s two-phase adaptation | 1 1 14.9s LogDensityProblems bridge | 1 1 0.2s Diagnostics | 2 2 1.3s Multicanonical | 12 12 11.4s Reweighting | 7 7 6.8s reweight Pair form (source => target) | 1 1 0.2s RejectionSampling | 5 5 1.3s Parallel ensembles | 5 5 21.3s RNG | 3 3 1.4s Utils | 4 4 1.0s Wang-Landau | 2 2 0.3s RNG of the outermost testset: Xoshiro(0xb659739104bcf8b1, 0xa80a98564c6731ce, 0x8b05d68778ba6226, 0xa97335dae2a9b329, 0x07bce635783a5ef8) ERROR: LoadError: Some tests did not pass: 186 passed, 0 failed, 1 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/MonteCarloX/B5hQG/test/runtests.jl:18 Testing failed after 183.5s ERROR: LoadError: Package MonteCarloX errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3283 [3] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:587 [4] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172 [5] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [6] test(pkg::String; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [inlined] [7] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:223 in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 PkgEval failed after 453.81s: package tests unexpectedly errored