Package evaluation to test LaMEM on Julia 1.14.0-DEV.3055 (7e75a8061a*) started at 2026-08-28T07:17:21.004 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 14.12s ################################################################################ # Installation # Installing LaMEM... Resolving package versions... Installed GeophysicalModelGenerator ─ v0.7.20 Updating `~/.julia/environments/v1.14/Project.toml` [2e889f3d] + LaMEM v0.4.15 Updating `~/.julia/environments/v1.14/Manifest.toml` [1520ce14] + AbstractTrees v0.4.5 [7d9f7c33] + Accessors v0.1.45 [79e6a3ab] + Adapt v4.7.0 [66dad0bd] + AliasTables v1.1.3 [13072b0f] + AxisAlgorithms v1.1.0 [39de3d68] + AxisArrays v0.4.8 [7b0aa2c9] + BibTeX v0.1.0 [fa961155] + CEnum v0.5.0 [d360d2e6] + ChainRulesCore v1.26.1 [0b6fb165] + ChunkCodecCore v1.0.2 [4c0bbee4] + ChunkCodecLibZlib v1.1.0 [55437552] + ChunkCodecLibZstd v1.0.0 [944b1d66] + CodecZlib v0.7.9 [6b39b394] + CodecZstd v0.8.7 [3da002f7] + ColorTypes v0.12.1 [c3611d14] + ColorVectorSpace v0.11.0 [5ae59095] + Colors v0.13.1 [38540f10] + CommonSolve v0.2.14 [bbf7d656] + CommonSubexpressions v0.3.1 [f70d9fcc] + CommonWorldInvalidations v1.2.0 [34da2185] + Compat v4.18.1 [a33af91c] + CompositionsBase v0.1.2 [187b0558] + ConstructionBase v1.6.0 [150eb455] + CoordinateTransformations v0.6.4 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.19.6 [e2d170a0] + DataValueInterfaces v1.0.0 [8bb1440f] + DelimitedFiles v1.9.1 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.16.0 [b4f34e82] + Distances v0.10.12 [ffbed154] + DocStringExtensions v0.9.5 [c87230d0] + FFMPEG v0.4.5 [5789e2e9] + FileIO v1.20.0 [1a297f60] + FillArrays v1.17.0 ⌅ [53c48c17] + FixedPointNumbers v0.8.6 [f6369f11] + ForwardDiff v1.4.5 [a0844989] + Gamma v1.2.0 [e018b62d] + GeoParams v0.7.19 [0ef565a4] + Geodesy v1.2.0 ⌅ [5c1252a2] + GeometryBasics v0.4.2 ⌃ [3700c31b] + GeophysicalModelGenerator v0.7.20 [c27321d9] + Glob v1.5.0 [076d061b] + HashArrayMappedTries v0.2.0 [34004b35] + HypergeometricFunctions v0.3.30 [b5f81e59] + IOCapture v1.0.0 [615f187c] + IfElse v0.1.1 [2803e5a7] + ImageAxes v0.6.12 [c817782e] + ImageBase v0.1.7 [a09fc81d] + ImageCore v0.10.5 [82e4d734] + ImageIO v0.6.9 [bc367c6b] + ImageMetadata v0.9.10 [9b13fd28] + IndirectArrays v1.0.0 [d25df0c9] + Inflate v0.1.5 [7d512f48] + InternedStrings v0.7.0 [a98d9a8b] + Interpolations v0.16.3 [8197267c] + IntervalSets v0.7.14 [3587e190] + InverseFunctions v0.1.17 [92d709cd] + IrrationalConstants v0.2.6 [c8e1da08] + IterTools v1.10.0 [82899510] + IteratorInterfaceExtensions v1.0.0 [033835bb] + JLD2 v0.6.6 [692b3bcd] + JLLWrappers v1.8.0 [b835a17e] + JpegTurbo v0.1.6 [49dc5b4e] + KernelDensitySJ v0.2.3 [2e889f3d] + LaMEM v0.4.15 [b964fa9f] + LaTeXStrings v1.4.1 [8cdb02fc] + LazyModules v0.3.1 [9c8b4983] + LightXML v0.9.3 [4345ca2d] + Loess v0.6.6 [2ab3a3ac] + LogExpFunctions v1.0.1 [da04e1cc] + MPI v0.20.27 [3da0fdf6] + MPIPreferences v0.1.12 [1914dd2f] + MacroTools v0.5.16 [36869731] + Malt v1.4.1 [dbb5928d] + MappedArrays v0.4.3 ⌃ [7269a6da] + MeshIO v0.4.13 [e1d29d7a] + Missings v1.2.0 [e94cdb99] + MosaicViews v0.3.4 [46d2c3a1] + MuladdMacro v0.2.7 [77ba4419] + NaNMath v1.1.4 [b8a86587] + NearestNeighbors v0.4.29 [f09324ee] + Netpbm v1.1.1 [6fe1bfb0] + OffsetArrays v1.17.0 [52e1d378] + OpenEXR v0.3.3 ⌅ [bac558e1] + OrderedCollections v1.8.2 [f57f5aa1] + PNGFiles v0.4.5 [5432bcbf] + PaddedViews v0.5.12 [d3525ed8] + ParallelTestRunner v2.8.1 ⌅ [d96e819e] + Parameters v0.12.3 [eebad327] + PkgVersion v0.3.3 [aea7be01] + PrecompileTools v1.3.4 [21216c6a] + Preferences v1.5.2 [92933f4c] + ProgressMeter v1.11.0 [43287f4e] + PtrArrays v1.4.0 [4b34888f] + QOI v1.0.2 [b3c3ace0] + RangeArrays v0.3.2 [c84ed2f1] + Ratios v0.4.5 [dc215faf] + ReadVTK v0.2.6 [189a3867] + Reexport v1.2.2 [05181044] + RelocatableFolders v1.0.1 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.9.0 ⌅ [f2b01f46] + Roots v2.3.0 [fdea26ae] + SIMD v3.7.2 [431bcebd] + SciMLPublic v1.3.0 [7e506255] + ScopedValues v1.6.2 [6c6a2e73] + Scratch v1.3.0 [efcf1570] + Setfield v1.1.2 [699a6c99] + SimpleTraits v0.9.6 [45858cf5] + Sixel v0.1.5 [a2af1166] + SortingAlgorithms v1.2.3 [276daf66] + SpecialFunctions v2.9.0 [cae243ae] + StackViews v0.1.2 [aedffcd0] + Static v1.4.6 [90137ffa] + StaticArrays v1.9.19 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 [2913bbd2] + StatsBase v0.34.13 [4c63d2b9] + StatsFuns v2.2.1 ⌅ [09ab397b] + StructArrays v0.6.21 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.14.0 [62fd8b95] + TensorCore v0.1.1 [731e570b] + TiffImages v0.11.9 [3bb67fe8] + TranscodingStreams v0.11.3 [3a884ed6] + UnPack v1.0.2 [967fb449] + Unidecode v1.2.0 [1986cc42] + Unitful v1.28.0 [4004b06d] + VTKBase v1.0.1 [e3aaa7dc] + WebP v0.1.3 ⌅ [ea906314] + WhereTheWaterFlows v0.11.1 [efce3f68] + WoodburyMatrices v1.1.0 [64499a7a] + WriteVTK v1.22.0 [6e34b625] + Bzip2_jll v1.0.9+0 [83423d85] + Cairo_jll v1.18.7+0 [5ae413db] + EarCut_jll v3.2.3+0 [2e619515] + Expat_jll v2.8.3+0 ⌅ [b22a6f82] + FFMPEG_jll v8.1.2+0 [a3f928ae] + Fontconfig_jll v2.17.1+0 [d7e528f0] + FreeType2_jll v2.14.3+1 [559328eb] + FriBidi_jll v1.0.17+0 ⌅ [a7073274] + GDAL_jll v300.500.101+0 ⌅ [d604d12d] + GEOS_jll v3.11.2+0 ⌅ [b0724c58] + GettextRuntime_jll v0.22.4+0 ⌅ [59f7168a] + Giflib_jll v5.2.3+0 [7746bdde] + Glib_jll v2.88.3+0 [3b182d85] + Graphite2_jll v1.3.16+0 ⌅ [2e76f6c2] + HarfBuzz_jll v8.5.1+0 [e33a78d0] + Hwloc_jll v2.14.0+0 [905a6f67] + Imath_jll v3.2.2+0 [aacddb02] + JpegTurbo_jll v3.2.0+1 [c1c5ebd0] + LAME_jll v3.100.3+0 ⌅ [88015f11] + LERC_jll v3.0.0+1 [1d63c593] + LLVMOpenMP_jll v22.1.7+0 ⌅ [15d6fa20] + LaMEM_jll v2.2.0+0 ⌅ [e9f186c6] + Libffi_jll v3.4.7+0 [7e76a0d4] + Libglvnd_jll v1.7.1+1 [94ce4f54] + Libiconv_jll v1.18.0+0 [4b2f31a3] + Libmount_jll v2.42.0+0 ⌅ [89763e89] + Libtiff_jll v4.4.0+0 [38a345b3] + Libuuid_jll v2.42.0+0 ⌃ [d3a379c0] + LittleCMS_jll v2.12.0+0 [b5ada748] + MPIABI_jll v1.0.0+0 ⌅ [7cb0a576] + MPICH_jll v4.2.3+0 [f1f71cc9] + MPItrampoline_jll v5.5.6+0 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 [e7412a2a] + Ogg_jll v1.3.6+0 [656ef2d0] + OpenBLAS32_jll v0.3.34+0 [18a262bb] + OpenEXR_jll v3.4.14+0 ⌃ [643b3616] + OpenJpeg_jll v2.4.0+0 [fe0851c0] + OpenMPI_jll v5.0.11+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [91d4177d] + Opus_jll v1.6.1+0 ⌃ [8fa3689e] + PETSc_jll v3.22.0+0 ⌅ [58948b4f] + PROJ_jll v900.100.0+0 [30392449] + Pixman_jll v0.46.4+0 [f50d1b31] + Rmath_jll v0.5.2+0 ⌃ [aabda75e] + SCALAPACK32_jll v2.2.1+1 [76ed43ae] + SQLite_jll v3.53.2+0 ⌅ [02c8fc9c] + XML2_jll v2.13.9+0 [4f6342f7] + Xorg_libX11_jll v1.8.13+0 [0c0b7dd1] + Xorg_libXau_jll v1.0.13+0 [a3789734] + Xorg_libXdmcp_jll v1.1.6+0 [1082639a] + Xorg_libXext_jll v1.3.8+0 [d091e8ba] + Xorg_libXfixes_jll v6.0.2+0 [ea2f1a96] + Xorg_libXrender_jll v0.9.12+0 [a65dc6b1] + Xorg_libpciaccess_jll v0.19.0+0 [c7cfdc94] + Xorg_libxcb_jll v1.17.1+0 [c5fb5394] + Xorg_xtrans_jll v1.6.0+0 [c4b69c83] + dlfcn_win32_jll v1.4.2+0 [a4ae2306] + libaom_jll v3.14.1+0 [0ac62f75] + libass_jll v0.17.4+0 [8e53e030] + libdrm_jll v2.4.134+0 [f638f0a6] + libfdk_aac_jll v2.0.4+0 ⌃ [06c338fa] + libgeotiff_jll v100.700.100+0 [b53b4c65] + libpng_jll v1.6.58+0 [075b6546] + libsixel_jll v1.10.5+0 [9a156e7d] + libva_jll v2.23.0+0 [f27f6e37] + libvorbis_jll v1.3.8+0 ⌃ [c5f90fcd] + libwebp_jll v1.4.0+0 ⌅ [1270edf5] + x264_jll v10164.0.1+0 [dfaa095f] + x265_jll v4.1.0+0 [0dad84c5] + ArgTools v1.2.0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.12.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v1.0.0 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.14.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.14.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.13.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.13.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.5.7+0 [deac9b47] + LibCURL_jll v8.21.0+0 [e37daf67] + LibGit2_jll v1.9.7+0 [29816b5a] + LibSSH2_jll v1.11.104+0 [14a3606d] + MozillaCACerts_jll v2026.8.13 [4536629a] + OpenBLAS_jll v0.3.34+0 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.8+0 [efcefdf7] + PCRE2_jll v10.47.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.2+0 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.70.0+0 [3f19e933] + p7zip_jll v17.8.2+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Installation completed after 19.34s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... ┌ Warning: Could not use exact versions of packages in manifest, re-resolving └ @ TestEnv ~/.julia/packages/TestEnv/sTG3E/src/julia-1.13/activate_set.jl:78 Precompiling package dependencies... Precompiling project... 5.7 s ✓ MPICH_jll 4.9 s ✓ SCALAPACK32_jll 10.7 s ✓ MPI 4.2 s ✓ PETSc_jll 4.4 s ✓ LaMEM_jll 21.9 s ✓ LaMEM Adding Plots.jl plotting extensions for LaMEM 29.7 s ✓ LaMEM → PlotsExt 7 dependencies successfully precompiled in 84 seconds. 335 already precompiled. 1 dependency had output during precompilation: ┌ LaMEM → PlotsExt │ Adding Plots.jl plotting extensions for LaMEM └ Precompilation completed after 130.53s ################################################################################ # Testing # Testing LaMEM Test Could not use exact versions of packages in manifest, re-resolving. Note: if you do not check your manifest file into source control, then you can probably ignore this message. However, if you do check your manifest file into source control, then you probably want to pass the `allow_reresolve = false` kwarg when calling the `Pkg.test` function. Updating `/tmp/jl_zYNxHy/Project.toml` [3700c31b] ↑ GeophysicalModelGenerator v0.7.20 ⇒ v0.7.21 [2e889f3d] + LaMEM v0.4.15 [91a5bcdd] + Plots v1.41.7 Updating `/tmp/jl_zYNxHy/Manifest.toml` [35d6a980] + ColorSchemes v3.31.0 [d38c429a] + Contour v0.6.3 [e2d170a0] - DataValueInterfaces v1.0.0 [1fa38f19] + Format v1.3.7 [28b8d3ca] + GR v0.73.27 [5c1252a2] ↑ GeometryBasics v0.4.2 ⇒ v0.5.11 [3700c31b] ↑ GeophysicalModelGenerator v0.7.20 ⇒ v0.7.21 [42e2da0e] + Grisu v1.0.2 [82899510] - IteratorInterfaceExtensions v1.0.0 [1019f520] + JLFzf v0.1.11 [682c06a0] + JSON v1.7.1 [2e889f3d] + LaMEM v0.4.15 [23fbe1c1] + Latexify v0.16.12 [442fdcdd] + Measures v0.3.3 [7269a6da] ↑ MeshIO v0.4.13 ⇒ v0.5.3 ⌅ [69de0a69] + Parsers v2.8.7 [ccf2f8ad] + PlotThemes v3.3.0 [995b91a9] + PlotUtils v1.4.4 [91a5bcdd] + Plots v1.41.7 [3cdcf5f2] + RecipesBase v1.3.4 [01d81517] + RecipesPipeline v0.6.12 [992d4aef] + Showoff v1.0.3 [860ef19b] + StableRNGs v1.0.4 [09ab397b] - StructArrays v0.6.21 [ec057cc2] + StructUtils v2.8.5 [3783bdb8] - TableTraits v1.0.1 [bd369af6] - Tables v1.14.0 [1cfade01] + UnicodeFun v0.4.1 [41fe7b60] + Unzip v0.2.0 [ee1fde0b] + Dbus_jll v1.16.2+0 ⌅ [5ae413db] ↓ EarCut_jll v3.2.3+0 ⇒ v2.2.4+0 [2702e6a9] + EpollShim_jll v0.0.20230411+1 [a7073274] - GDAL_jll v300.500.101+0 [d604d12d] - GEOS_jll v3.11.2+0 [0656b61e] + GLFW_jll v3.5.1+0 [d2c73de3] + GR_jll v0.73.27+0 [61579ee1] + Ghostscript_jll v9.55.1+0 [88015f11] ↑ LERC_jll v3.0.0+1 ⇒ v4.1.0+0 [89763e89] ↑ Libtiff_jll v4.4.0+0 ⇒ v4.7.3+0 [d3a379c0] - LittleCMS_jll v2.12.0+0 [643b3616] - OpenJpeg_jll v2.4.0+0 [58948b4f] - PROJ_jll v900.100.0+0 [36c8627f] + Pango_jll v1.58.0+0 [c0090381] + Qt6Base_jll v6.10.2+2 [629bc702] + Qt6Declarative_jll v6.10.2+2 [ce943373] + Qt6ShaderTools_jll v6.10.2+1 [6de9746b] + Qt6Svg_jll v6.10.2+0 [e99dba38] + Qt6Wayland_jll v6.10.2+1 [76ed43ae] - SQLite_jll v3.53.2+0 [a44049a8] + Vulkan_Loader_jll v1.3.243+0 [a2964d1f] + Wayland_jll v1.24.0+0 [ffd25f8a] + XZ_jll v5.8.3+0 [f67eecfb] + Xorg_libICE_jll v1.1.2+0 [c834827a] + Xorg_libSM_jll v1.2.6+0 [935fb764] + Xorg_libXcursor_jll v1.2.4+0 [a51aa0fd] + Xorg_libXi_jll v1.8.4+0 [d1454406] + Xorg_libXinerama_jll v1.1.7+0 [ec84b674] + Xorg_libXrandr_jll v1.5.6+0 [cc61e674] + Xorg_libxkbfile_jll v1.2.0+0 [e920d4aa] + Xorg_xcb_util_cursor_jll v0.1.6+0 [12413925] + Xorg_xcb_util_image_jll v0.4.1+0 [2def613f] + Xorg_xcb_util_jll v0.4.1+0 [975044d2] + Xorg_xcb_util_keysyms_jll v0.4.1+0 [0d47668e] + Xorg_xcb_util_renderutil_jll v0.3.10+0 [c22f9ab0] + Xorg_xcb_util_wm_jll v0.4.2+0 [35661453] + Xorg_xkbcomp_jll v1.4.7+0 [33bec58e] + Xorg_xkeyboard_config_jll v2.47.0+2 [c4b69c83] - dlfcn_win32_jll v1.4.2+0 [35ca27e7] + eudev_jll v3.2.14+0 ⌅ [214eeab7] + fzf_jll v0.61.1+0 [1183f4f0] + libdecor_jll v0.2.2+0 [2db6ffa8] + libevdev_jll v1.13.4+0 [06c338fa] - libgeotiff_jll v100.700.100+0 [36db933b] + libinput_jll v1.28.1+0 [c5f90fcd] ↑ libwebp_jll v1.4.0+0 ⇒ v1.6.0+0 [009596ad] + mtdev_jll v1.1.7+0 [d8fb68d0] + xkbcommon_jll v1.13.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Test Successfully re-resolved Status `/tmp/jl_zYNxHy/Project.toml` [8bb1440f] DelimitedFiles v1.9.1 [ffbed154] DocStringExtensions v0.9.5 [e018b62d] GeoParams v0.7.19 [3700c31b] GeophysicalModelGenerator v0.7.21 [c27321d9] Glob v1.5.0 [a98d9a8b] Interpolations v0.16.3 [2e889f3d] LaMEM v0.4.15 [9c8b4983] LightXML v0.9.3 [da04e1cc] MPI v0.20.27 [3da0fdf6] MPIPreferences v0.1.12 [91a5bcdd] Plots v1.41.7 [dc215faf] ReadVTK v0.2.6 [10745b16] Statistics v1.11.1 [64499a7a] WriteVTK v1.22.0 ⌅ [15d6fa20] LaMEM_jll v2.2.0+0 ⌅ [7cb0a576] MPICH_jll v4.2.3+0 [8dfed614] Test v1.11.0 Status `/tmp/jl_zYNxHy/Manifest.toml` [1520ce14] AbstractTrees v0.4.5 [7d9f7c33] Accessors v0.1.45 [79e6a3ab] Adapt v4.7.0 [66dad0bd] AliasTables v1.1.3 [13072b0f] AxisAlgorithms v1.1.0 [39de3d68] AxisArrays v0.4.8 [7b0aa2c9] BibTeX v0.1.0 [fa961155] CEnum v0.5.0 [d360d2e6] ChainRulesCore v1.26.1 [0b6fb165] ChunkCodecCore v1.0.2 [4c0bbee4] ChunkCodecLibZlib v1.1.0 [55437552] ChunkCodecLibZstd v1.0.0 [944b1d66] CodecZlib v0.7.9 [6b39b394] CodecZstd v0.8.7 [35d6a980] ColorSchemes v3.31.0 [3da002f7] ColorTypes v0.12.1 [c3611d14] ColorVectorSpace v0.11.0 [5ae59095] Colors v0.13.1 [38540f10] CommonSolve v0.2.14 [bbf7d656] CommonSubexpressions v0.3.1 [f70d9fcc] CommonWorldInvalidations v1.2.0 [34da2185] Compat v4.18.1 [a33af91c] CompositionsBase v0.1.2 [187b0558] ConstructionBase v1.6.0 [d38c429a] Contour v0.6.3 [150eb455] CoordinateTransformations v0.6.4 [9a962f9c] DataAPI v1.16.0 [864edb3b] DataStructures v0.19.6 [8bb1440f] DelimitedFiles v1.9.1 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.16.0 [b4f34e82] Distances v0.10.12 [ffbed154] DocStringExtensions v0.9.5 [c87230d0] FFMPEG v0.4.5 [5789e2e9] FileIO v1.20.0 [1a297f60] FillArrays v1.17.0 ⌅ [53c48c17] FixedPointNumbers v0.8.6 [1fa38f19] Format v1.3.7 [f6369f11] ForwardDiff v1.4.5 [28b8d3ca] GR v0.73.27 [a0844989] Gamma v1.2.0 [e018b62d] GeoParams v0.7.19 [0ef565a4] Geodesy v1.2.0 [5c1252a2] 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v1.70.0+0 [3f19e933] p7zip_jll v17.8.2+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... Saved file: Model3D.vts Julia setup: Error During Test at /home/pkgeval/.julia/packages/LaMEM/oqMYk/test/test_julia_setups.jl:6 Got exception outside of a @test LoadError: UndefVarError: `@var` not defined in `Base.Docs` Suggestion: check for spelling errors or missing imports. Stacktrace: [1] fl_lower(ex::Expr, mod::Module, filename::String, lineno::Int64, world::UInt64, warn::Bool) @ Base flfrontend.jl:23 [2] eval(m::Module, e::Any) @ Core boot.jl:618 [3] get_doc(structure::Core.TypeEgal{Time}, field::Symbol) @ LaMEM ~/.julia/packages/LaMEM/oqMYk/src/DocUtils.jl:13 [4] write_LaMEM_inputFile(io::IOStream, d::Time) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Time.jl:109 [5] write_LaMEM_inputFile(d::Model, fname::String; dir::String) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:174 [6] write_LaMEM_inputFile(d::Model, fname::String) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:156 [7] create_initialsetup(model::Model, cores::Int64, args::String; verbose::Bool, add_APS::Bool) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:294 [8] run_lamem(model::Model, cores::Int64, args::String; wait::Bool, add_APS::Bool) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:206 [9] run_lamem(model::Model, cores::Int64, args::String) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:201 [inlined] [10] top-level scope @ ~/.julia/packages/LaMEM/oqMYk/test/test_julia_setups.jl:12 [11] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2247 [inlined] [12] macro expansion @ ~/.julia/packages/LaMEM/oqMYk/test/test_julia_setups.jl:26 [inlined] in expression starting at none:1 Saved file: Model3D.vts velocity box: Error During Test at /home/pkgeval/.julia/packages/LaMEM/oqMYk/test/test_julia_setups.jl:42 Got exception outside of a @test LoadError: UndefVarError: `@var` not defined in `Base.Docs` Suggestion: check for spelling errors or missing imports. Stacktrace: [1] fl_lower(ex::Expr, mod::Module, filename::String, lineno::Int64, world::UInt64, warn::Bool) @ Base flfrontend.jl:23 [2] eval(m::Module, e::Any) @ Core boot.jl:618 [3] get_doc(structure::Core.TypeEgal{Time}, field::Symbol) @ LaMEM ~/.julia/packages/LaMEM/oqMYk/src/DocUtils.jl:13 [4] write_LaMEM_inputFile(io::IOStream, d::Time) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Time.jl:109 [5] write_LaMEM_inputFile(d::Model, fname::String; dir::String) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:174 [6] write_LaMEM_inputFile(d::Model, fname::String) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:156 [7] create_initialsetup(model::Model, cores::Int64, args::String; verbose::Bool, add_APS::Bool) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:294 [8] run_lamem(model::Model, cores::Int64, args::String; wait::Bool, add_APS::Bool) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:206 [9] run_lamem(model::Model, cores::Int64, args::String) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:201 [inlined] [10] top-level scope @ ~/.julia/packages/LaMEM/oqMYk/test/test_julia_setups.jl:47 [11] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2247 [inlined] [12] macro expansion @ ~/.julia/packages/LaMEM/oqMYk/test/test_julia_setups.jl:76 [inlined] in expression starting at none:1 Saved file: Model3D.vts phase transitions: Error During Test at /home/pkgeval/.julia/packages/LaMEM/oqMYk/test/test_julia_setups.jl:92 Got exception outside of a @test LoadError: UndefVarError: `@var` not defined in `Base.Docs` Suggestion: check for spelling errors or missing imports. Stacktrace: [1] fl_lower(ex::Expr, mod::Module, filename::String, lineno::Int64, world::UInt64, warn::Bool) @ Base flfrontend.jl:23 [2] eval(m::Module, e::Any) @ Core boot.jl:618 [3] get_doc(structure::Core.TypeEgal{Time}, field::Symbol) @ LaMEM ~/.julia/packages/LaMEM/oqMYk/src/DocUtils.jl:13 [4] write_LaMEM_inputFile(io::IOStream, d::Time) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Time.jl:109 [5] write_LaMEM_inputFile(d::Model, fname::String; dir::String) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:174 [6] write_LaMEM_inputFile(d::Model, fname::String) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:156 [7] create_initialsetup(model::Model, cores::Int64, args::String; verbose::Bool, add_APS::Bool) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:294 [8] run_lamem(model::Model, cores::Int64, args::String; wait::Bool, add_APS::Bool) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:206 [9] run_lamem(model::Model, cores::Int64, args::String) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:201 [inlined] [10] top-level scope @ ~/.julia/packages/LaMEM/oqMYk/test/test_julia_setups.jl:96 [11] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2247 [inlined] [12] macro expansion @ ~/.julia/packages/LaMEM/oqMYk/test/test_julia_setups.jl:149 [inlined] in expression starting at none:1 pwd() = "/home/pkgeval/.julia/packages/LaMEM/oqMYk/test/example_1/example_1/example_phase" readdir() = ["Model3D.vts", "output.dat"] Saved file: Model3D.vts phase diagrams: Error During Test at /home/pkgeval/.julia/packages/LaMEM/oqMYk/test/test_julia_setups.jl:164 Got exception outside of a @test LoadError: UndefVarError: `@var` not defined in `Base.Docs` Suggestion: check for spelling errors or missing imports. Stacktrace: [1] fl_lower(ex::Expr, mod::Module, filename::String, lineno::Int64, world::UInt64, warn::Bool) @ Base flfrontend.jl:23 [2] eval(m::Module, e::Any) @ Core boot.jl:618 [3] get_doc(structure::Core.TypeEgal{Time}, field::Symbol) @ LaMEM ~/.julia/packages/LaMEM/oqMYk/src/DocUtils.jl:13 [4] write_LaMEM_inputFile(io::IOStream, d::Time) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Time.jl:109 [5] write_LaMEM_inputFile(d::Model, fname::String; dir::String) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:174 [6] write_LaMEM_inputFile(d::Model, fname::String) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:156 [7] create_initialsetup(model::Model, cores::Int64, args::String; verbose::Bool, add_APS::Bool) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:294 [8] run_lamem(model::Model, cores::Int64, args::String; wait::Bool, add_APS::Bool) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:206 [9] run_lamem(model::Model, cores::Int64, args::String) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:201 [inlined] [10] top-level scope @ ~/.julia/packages/LaMEM/oqMYk/test/test_julia_setup_phase_diagrams.jl:36 [11] include(mapexpr::Function, mod::Module, _path::String) @ Base Base.jl:335 [12] top-level scope @ ~/.julia/packages/LaMEM/oqMYk/test/test_julia_setups.jl:166 [13] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2247 [inlined] [14] macro expansion @ ~/.julia/packages/LaMEM/oqMYk/test/test_julia_setups.jl:166 [inlined] in expression starting at none:1 in expression starting at /home/pkgeval/.julia/packages/LaMEM/oqMYk/test/test_julia_setup_phase_diagrams.jl:36 Saved file: Model3D.vts build-in geometries: Error During Test at /home/pkgeval/.julia/packages/LaMEM/oqMYk/test/test_julia_setups.jl:171 Got exception outside of a @test LoadError: UndefVarError: `@var` not defined in `Base.Docs` Suggestion: check for spelling errors or missing imports. Stacktrace: [1] fl_lower(ex::Expr, mod::Module, filename::String, lineno::Int64, world::UInt64, warn::Bool) @ Base flfrontend.jl:23 [2] eval(m::Module, e::Any) @ Core boot.jl:618 [3] get_doc(structure::Core.TypeEgal{Time}, field::Symbol) @ LaMEM ~/.julia/packages/LaMEM/oqMYk/src/DocUtils.jl:13 [4] write_LaMEM_inputFile(io::IOStream, d::Time) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Time.jl:109 [5] write_LaMEM_inputFile(d::Model, fname::String; dir::String) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:174 [6] write_LaMEM_inputFile(d::Model, fname::String) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:156 [7] create_initialsetup(model::Model, cores::Int64, args::String; verbose::Bool, add_APS::Bool) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:294 [8] run_lamem(model::Model, cores::Int64, args::String; wait::Bool, add_APS::Bool) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:206 [9] run_lamem(model::Model, cores::Int64, args::String) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:201 [inlined] [10] top-level scope @ ~/.julia/packages/LaMEM/oqMYk/test/test_julia_setups.jl:174 [11] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2247 [inlined] [12] macro expansion @ ~/.julia/packages/LaMEM/oqMYk/test/test_julia_setups.jl:187 [inlined] in expression starting at none:1 cores_compute = 1 -------------------------------------------------------------------------- Lithosphere and Mantle Evolution Model Compiled: Date: Jan 1 1970 - Time: 00:00:00 Version : 2.2.0 -------------------------------------------------------------------------- STAGGERED-GRID FINITE DIFFERENCE CANONICAL IMPLEMENTATION -------------------------------------------------------------------------- Parsing input file : /home/pkgeval/.julia/packages/LaMEM/oqMYk/test/input_files/FallingBlock_Multigrid.dat Adding PETSc option: -snes_type ksponly Adding PETSc option: -js_ksp_monitor Adding PETSc option: -crs_pc_type bjacobi Finished parsing input file -------------------------------------------------------------------------- Time stepping parameters: Simulation end time : 100. [ ] Maximum number of steps : 1 Time step : 10. [ ] Minimum time step : 1e-05 [ ] Maximum time step : 100. [ ] Time step increase factor : 0.1 CFL criterion : 0.5 CFLMAX (fixed time steps) : 0.5 Output time step : 0.2 [ ] Output every [n] steps : 1 Output [n] initial steps : 1 -------------------------------------------------------------------------- Grid parameters: Total number of cpu : 1 Processor grid [nx, ny, nz] : [1, 1, 1] Fine grid cells [nx, ny, nz] : [32, 32, 32] Number of cells : 32768 Number of faces : 101376 Maximum cell aspect ratio : 1.00000 Lower coordinate bounds [bx, by, bz] : [0., 0., 0.] Upper coordinate bounds [ex, ey, ez] : [1., 1., 1.] -------------------------------------------------------------------------- -------------------------------------------------------------------------- Material parameters: -------------------------------------------------------------------------- Phase ID : 0 (dens) : rho = 1. [ ] (diff) : eta = 1. [ ] Bd = 0.5 [ ] Phase ID : 1 (dens) : rho = 2. [ ] (diff) : eta = 100. [ ] Bd = 0.005 [ ] Phase ID : 2 (dens) : rho = 2. [ ] (diff) : eta = 1000. [ ] Bd = 0.0005 [ ] -------------------------------------------------------------------------- -------------------------------------------------------------------------- Boundary condition parameters: No-slip boundary mask [lt rt ft bk bm tp] : 0 0 0 0 0 0 -------------------------------------------------------------------------- Solution parameters & controls: Gravity [gx, gy, gz] : [0., 0., -1.] [ ] Surface stabilization (FSSA) : 1. Use lithostatic pressure for creep @ Minimum viscosity : 0.001 [ ] Maximum viscosity : 1e+12 [ ] Max. melt fraction (viscosity, density) : 1. Rheology iteration number : 25 Rheology iteration tolerance : 1e-06 Ground water level type : none -------------------------------------------------------------------------- Advection parameters: Advection scheme : Runge-Kutta 2-nd order Periodic marker advection : 0 0 0 Marker setup scheme : geometric primitives Velocity interpolation scheme : empirical STAGP (STAG + pressure points) Marker control type : pure AVD for all control volumes Markers per cell [nx, ny, nz] : [3, 3, 3] Marker distribution type : random noise Background phase ID : 0 Interpolation constant : 0.7 -------------------------------------------------------------------------- Reading geometric primitives ... done (0.0179912 sec) -------------------------------------------------------------------------- Output parameters: Output file name : FB_multigrid Write .pvd file : yes Phase @ Total effective viscosity @ Creep effective viscosity @ Velocity @ Pressure @ Deviatoric stress second invariant @ Deviatoric strain rate tensor @ Deviatoric strain rate second invariant @ -------------------------------------------------------------------------- AVD output parameters: Write .pvd file : yes AVD refinement factor : 3 -------------------------------------------------------------------------- Preconditioner parameters: Matrix type : monolithic Preconditioner type : coupled Galerkin geometric multigrid Global coarse grid [nx,ny,nz] : [4, 4, 4] Local coarse grid [nx,ny,nz] : [4, 4, 4] Number of multigrid levels : 4 -------------------------------------------------------------------------- Solver parameters specified: Outermost Krylov solver : gmres Solver type : multigrid Multigrid smoother levels KSP : chebyshev Multigrid smoother levels PC : sor Number of smoothening steps : 10 Coarse level KSP : preonly Coarse level PC : bjacobi -------------------------------------------------------------------------- Saving output ... done (0.942722 sec) -------------------------------------------------------------------------- ================================= STEP 1 ================================= -------------------------------------------------------------------------- Current time : 0.00000000 [ ] Tentative time step : 10.00000000 [ ] -------------------------------------------------------------------------- 0 SNES Function norm 1.832203177398e+02 0 PICARD ||F||/||F0||=1.000000e+00 Residual norms for js_ solve. 0 KSP Residual norm 2.121468833494e+01 1 KSP Residual norm 2.007312746141e+01 2 KSP Residual norm 1.436721786209e+01 3 KSP Residual norm 7.031413261029e+00 4 KSP Residual norm 2.361866279194e+00 5 KSP Residual norm 1.011785314253e+00 6 KSP Residual norm 4.700182839568e-01 7 KSP Residual norm 3.431392417303e-01 8 KSP Residual norm 1.759675422305e-01 9 KSP Residual norm 1.053716068646e-01 10 KSP Residual norm 9.342460424456e-02 11 KSP Residual norm 7.749792924281e-02 12 KSP Residual norm 5.192767141947e-02 13 KSP Residual norm 3.842800827131e-02 14 KSP Residual norm 1.589386132945e-02 15 KSP Residual norm 8.851034636270e-03 16 KSP Residual norm 4.554700539643e-03 17 KSP Residual norm 2.632601842744e-03 18 KSP Residual norm 1.311043982680e-03 19 KSP Residual norm 6.462411312190e-04 20 KSP Residual norm 3.583024898005e-04 21 KSP Residual norm 1.510300546983e-04 Linear js_ solve converged due to CONVERGED_RTOL iterations 21 1 SNES Function norm 1.371165820193e-02 -------------------------------------------------------------------------- SNES Convergence Reason : maximum iterations reached Number of iterations : 1 SNES solution time : 5.72429 (sec) -------------------------------------------------------------------------- Residual summary: Continuity: |Div|_inf = 2.351162463584e-05 |Div|_2 = 1.404433456066e-04 Momentum: |mRes|_2 = 1.371093892895e-02 -------------------------------------------------------------------------- Actual time step : 6.73129 [ ] -------------------------------------------------------------------------- Marker control [0]: (AVD YZED) injected 5 markers and deleted 0 markers in 9.5052e-04 s Marker control [0]: (AVD XZED) injected 7 markers and deleted 0 markers in 1.0635e-03 s Marker control [0]: (AVD XYED) injected 10 markers and deleted 0 markers in 1.3890e-03 s -------------------------------------------------------------------------- Saving output ... done (1.46211 sec) -------------------------------------------------------------------------- =========================== SOLUTION IS DONE! ============================ -------------------------------------------------------------------------- Total solution time : 9.82194 (sec) -------------------------------------------------------------------------- WARNING! There are options you set that were not used! WARNING! could be spelling mistake, etc! There are 6 unused database options. They are: Option left: name:-crs_pc_factor_mat_solver_type value: mumps source: code Option left: name:-mat_product_algorithm value: scalable source: code Option left: name:-matmatmult_via value: scalable source: code Option left: name:-ParamFile value: /home/pkgeval/.julia/packages/LaMEM/oqMYk/test/input_files/FallingBlock_Multigrid.dat source: code Option left: name:-snes_linesearch_maxstep value: 1.0 source: code Option left: name:-snes_linesearch_type value: basic source: code cores_compute = 4 Falling Block test on 4 cores failed cores_compute = 1 -------------------------------------------------------------------------- Lithosphere and Mantle Evolution Model Compiled: Date: Jan 1 1970 - Time: 00:00:00 Version : 2.2.0 -------------------------------------------------------------------------- STAGGERED-GRID FINITE DIFFERENCE CANONICAL IMPLEMENTATION -------------------------------------------------------------------------- Parsing input file : /home/pkgeval/.julia/packages/LaMEM/oqMYk/test/input_files/FallingBlock_DirectSolver.dat Adding PETSc option: -snes_type ksponly Adding PETSc option: -js_ksp_monitor Finished parsing input file -------------------------------------------------------------------------- Time stepping parameters: Simulation end time : 100. [ ] Maximum number of steps : 2 Time step : 10. [ ] Minimum time step : 1e-05 [ ] Maximum time step : 100. [ ] Time step increase factor : 0.1 CFL criterion : 0.5 CFLMAX (fixed time steps) : 0.5 Output time step : 0.2 [ ] Output every [n] steps : 1000 Output [n] initial steps : 1 -------------------------------------------------------------------------- Grid parameters: Total number of cpu : 1 Processor grid [nx, ny, nz] : [1, 1, 1] Fine grid cells [nx, ny, nz] : [16, 16, 16] Number of cells : 4096 Number of faces : 13056 Maximum cell aspect ratio : 1.00000 Lower coordinate bounds [bx, by, bz] : [0., 0., 0.] Upper coordinate bounds [ex, ey, ez] : [1., 1., 1.] -------------------------------------------------------------------------- -------------------------------------------------------------------------- Material parameters: -------------------------------------------------------------------------- Phase ID : 0 (dens) : rho = 1. [ ] (diff) : eta = 1. [ ] Bd = 0.5 [ ] Phase ID : 1 (dens) : rho = 2. [ ] (diff) : eta = 100. [ ] Bd = 0.005 [ ] -------------------------------------------------------------------------- -------------------------------------------------------------------------- Boundary condition parameters: No-slip boundary mask [lt rt ft bk bm tp] : 0 0 0 0 0 0 -------------------------------------------------------------------------- Solution parameters & controls: Gravity [gx, gy, gz] : [0., 0., -1.] [ ] Surface stabilization (FSSA) : 1. Use lithostatic pressure for creep @ Minimum viscosity : 0.001 [ ] Maximum viscosity : 1e+12 [ ] Max. melt fraction (viscosity, density) : 1. Rheology iteration number : 25 Rheology iteration tolerance : 1e-06 Ground water level type : none -------------------------------------------------------------------------- Advection parameters: Advection scheme : Runge-Kutta 2-nd order Periodic marker advection : 0 0 0 Marker setup scheme : geometric primitives Velocity interpolation scheme : empirical STAGP (STAG + pressure points) Marker control type : pure AVD for all control volumes Markers per cell [nx, ny, nz] : [3, 3, 3] Marker distribution type : random noise Background phase ID : 0 Interpolation constant : 0.7 -------------------------------------------------------------------------- Reading geometric primitives ... done (0.00276769 sec) -------------------------------------------------------------------------- Output parameters: Output file name : FB_direct Write .pvd file : yes Phase @ Total effective viscosity @ Creep effective viscosity @ Velocity @ Pressure @ -------------------------------------------------------------------------- AVD output parameters: Write .pvd file : yes AVD refinement factor : 3 -------------------------------------------------------------------------- Preconditioner parameters: Matrix type : monolithic Penalty parameter (pgamma) : 1.000000e+03 Preconditioner type : user-defined -------------------------------------------------------------------------- Solver parameters specified: Outermost Krylov solver : gmres Solver type : serial direct/lu Solver package : petsc -------------------------------------------------------------------------- Saving output ... done (0.117701 sec) -------------------------------------------------------------------------- ================================= STEP 1 ================================= -------------------------------------------------------------------------- Current time : 0.00000000 [ ] Tentative time step : 10.00000000 [ ] -------------------------------------------------------------------------- 0 SNES Function norm 7.310266752999e+01 0 PICARD ||F||/||F0||=1.000000e+00 Residual norms for js_ solve. 0 KSP Residual norm 2.133540043787e+01 1 KSP Residual norm 1.859427686320e-02 2 KSP Residual norm 2.899733404792e-05 Linear js_ solve converged due to CONVERGED_RTOL iterations 2 1 SNES Function norm 1.649877042997e-04 -------------------------------------------------------------------------- SNES Convergence Reason : maximum iterations reached Number of iterations : 1 SNES solution time : 2.20574 (sec) -------------------------------------------------------------------------- Residual summary: Continuity: |Div|_inf = 1.056315829539e-06 |Div|_2 = 3.650679846238e-05 Momentum: |mRes|_2 = 1.608980927050e-04 -------------------------------------------------------------------------- Actual time step : 7.69851 [ ] -------------------------------------------------------------------------- Marker control [0]: (AVD CELL) injected 1 markers and deleted 0 markers in 2.8286e-04 s Marker control [0]: (AVD YZED) injected 6 markers and deleted 0 markers in 1.0229e-03 s Marker control [0]: (AVD XZED) injected 8 markers and deleted 0 markers in 1.4184e-03 s Marker control [0]: (AVD XYED) injected 2 markers and deleted 0 markers in 4.4182e-04 s -------------------------------------------------------------------------- Saving output ... done (0.141883 sec) -------------------------------------------------------------------------- ================================= STEP 2 ================================= -------------------------------------------------------------------------- Current time : 7.69851107 [ ] Tentative time step : 7.69851107 [ ] -------------------------------------------------------------------------- 0 SNES Function norm 1.307661178463e+02 0 PICARD ||F||/||F0||=1.000000e+00 Residual norms for js_ solve. 0 KSP Residual norm 1.189285812726e+00 1 KSP Residual norm 1.071718651369e-03 2 KSP Residual norm 2.121756434744e-06 Linear js_ solve converged due to CONVERGED_RTOL iterations 2 1 SNES Function norm 5.789132153693e-04 -------------------------------------------------------------------------- SNES Convergence Reason : maximum iterations reached Number of iterations : 1 SNES solution time : 1.96976 (sec) -------------------------------------------------------------------------- Residual summary: Continuity: |Div|_inf = 8.594135842213e-08 |Div|_2 = 7.340971817408e-07 Momentum: |mRes|_2 = 5.789127499292e-04 -------------------------------------------------------------------------- Actual time step : 8.25319 [ ] -------------------------------------------------------------------------- Marker control [0]: (AVD YZED) injected 5 markers and deleted 0 markers in 8.4540e-04 s Marker control [0]: (AVD XZED) injected 4 markers and deleted 0 markers in 7.0434e-04 s Marker control [0]: (AVD XYED) injected 7 markers and deleted 0 markers in 1.3869e-03 s -------------------------------------------------------------------------- Saving output ... done (0.151478 sec) -------------------------------------------------------------------------- =========================== SOLUTION IS DONE! ============================ -------------------------------------------------------------------------- Total solution time : 4.99754 (sec) -------------------------------------------------------------------------- WARNING! There are options you set that were not used! WARNING! could be spelling mistake, etc! There are 6 unused database options. They are: Option left: name:-mat_product_algorithm value: scalable source: code Option left: name:-matmatmatmult_via value: scalable source: code Option left: name:-matmatmult_via value: scalable source: code Option left: name:-ParamFile value: /home/pkgeval/.julia/packages/LaMEM/oqMYk/test/input_files/FallingBlock_DirectSolver.dat source: code Option left: name:-snes_linesearch_maxstep value: 1.0 source: code Option left: name:-snes_linesearch_type value: basic source: code cores_compute = 2 Fatal error in internal_Init_thread: Other MPI error, error stack: internal_Init_thread(49255)........: MPI_Init_thread(argc=0x7ffefe08969c, argv=0x7ffefe089690, required=1, provided=0x7ffefe08924c) failed MPII_Init_thread(242)..............: MPID_Init(67)......................: init_world(171)....................: channel initialization failed MPIDI_CH3_Init(84).................: MPID_nem_init(314).................: MPID_nem_tcp_init(175).............: MPID_nem_tcp_get_business_card(397): GetSockInterfaceAddr(370)..........: gethostbyname failed, LaMEM-primary-G01XpHFm (errno 1) run LaMEM: Error During Test at /home/pkgeval/.julia/packages/LaMEM/oqMYk/test/runLaMEM.jl:4 Got exception outside of a @test failed process: Process(setenv(`/home/pkgeval/.julia/artifacts/e85c0a68e07fee0ee7b19c2abc210b1af2f4771a/bin/mpiexec -n 2 /home/pkgeval/.julia/artifacts/08aa29bd2049e65af380a777c89a44d4c0f51da7/bin/LaMEM -ParamFile /home/pkgeval/.julia/packages/LaMEM/oqMYk/test/input_files/FallingBlock_DirectSolver.dat '-nstep_max 5'`,["CI=true", "UCX_MEMTYPE_CACHE=no", "OPENBLAS_NUM_THREADS=1", "OPENBLAS_MAIN_FREE=1", "JULIA_CPU_THREADS=1", "JULIA_LOAD_PATH=/tmp/jl_t7efWw/Project.toml:/home/pkgeval/.julia/environments/v1.14/Project.toml:/opt/julia/share/julia/stdlib/v1.14", "FONTCONFIG_FILE=/home/pkgeval/.julia/artifacts/258f7271ca555a7634c0fe8b8508f69334673a89/etc/fonts/fonts.conf", "PYTHON=", "R_HOME=*", "JULIA_NUM_PRECOMPILE_TASKS=1", "JULIA_DEPOT_PATH=/home/pkgeval/.julia:/usr/local/share/julia:", "UCX_ERROR_SIGNALS=SIGILL,SIGBUS,SIGFPE", "JULIA_PKG_PRECOMPILE_AUTO=0", "FONTCONFIG_PATH=/home/pkgeval/.julia/artifacts/258f7271ca555a7634c0fe8b8508f69334673a89/etc/fonts", "LD_LIBRARY_PATH=/opt/julia/bin/../lib/julia:/home/pkgeval/.julia/artifacts/0f2b4ed692df3011e3a4e49ed637d6c6ee059e0e/lib:/home/pkgeval/.julia/artifacts/5acd766faaca59c3c1f3cfa67e2bf6dcf1e3e883/lib:/home/pkgeval/.julia/artifacts/4a89e14d2f652ad45bcc093d040c97fbcc1a3669/lib:/home/pkgeval/.julia/artifacts/f36f3fe2fef57e1f6dc8a55991543cf71bfa6ce0/lib:/home/pkgeval/.julia/artifacts/110c1594febf9d894b6e4a30b3eeca0fa435f04f/lib:/home/pkgeval/.julia/artifacts/e85c0a68e07fee0ee7b19c2abc210b1af2f4771a/lib:/home/pkgeval/.julia/artifacts/0a6a41be79ef85f32aa7d8529d4aebf9ef8ab030/lib:/home/pkgeval/.julia/artifacts/fd874acf28ad612d0af6811612bf7e52c25cc815/lib/petsc/double_real_Int64/lib:/home/pkgeval/.julia/artifacts/fd874acf28ad612d0af6811612bf7e52c25cc815/lib/petsc/single_complex_Int32/lib:/home/pkgeval/.julia/artifacts/fd874acf28ad612d0af6811612bf7e52c25cc815/lib/petsc/single_complex_Int64/lib:/home/pkgeval/.julia/artifacts/fd874acf28ad612d0af6811612bf7e52c25cc815/lib/petsc/single_real_Int32/lib:/home/pkgeval/.julia/artifacts/fd874acf28ad612d0af6811612bf7e52c25cc815/lib/petsc/single_real_Int64/lib:/home/pkgeval/.julia/artifacts/fd874acf28ad612d0af6811612bf7e52c25cc815/lib/petsc/double_complex_Int32/lib:/home/pkgeval/.julia/artifacts/fd874acf28ad612d0af6811612bf7e52c25cc815/lib/petsc/double_complex_Int64/lib:/home/pkgeval/.julia/artifacts/fd874acf28ad612d0af6811612bf7e52c25cc815/lib/petsc/double_real_Int32/lib:/home/pkgeval/.julia/artifacts/fd874acf28ad612d0af6811612bf7e52c25cc815/lib/petsc/double_real_Int64_deb/lib:/home/pkgeval/.julia/artifacts/08aa29bd2049e65af380a777c89a44d4c0f51da7/lib:/opt/julia/bin/../lib/julia:/opt/julia/bin/../lib:/opt/julia/bin/../lib/julia:/home/pkgeval/.julia/artifacts/5acd766faaca59c3c1f3cfa67e2bf6dcf1e3e883/lib:/home/pkgeval/.julia/artifacts/4a89e14d2f652ad45bcc093d040c97fbcc1a3669/lib:/home/pkgeval/.julia/artifacts/f36f3fe2fef57e1f6dc8a55991543cf71bfa6ce0/lib:/home/pkgeval/.julia/artifacts/110c1594febf9d894b6e4a30b3eeca0fa435f04f/lib:/home/pkgeval/.julia/artifacts/e85c0a68e07fee0ee7b19c2abc210b1af2f4771a/lib:/opt/julia/bin/../lib/julia:/opt/julia/bin/../lib", "HOME=/home/pkgeval", "JULIA_PKGEVAL=true", "OMP_NUM_THREADS=1", "JULIA_NUM_THREADS=1", "VECLIB_MAXIMUM_THREADS=1", "JULIA_PRECOMP_REPORT_TIMING=1", "PATH=/home/pkgeval/.julia/artifacts/4a89e14d2f652ad45bcc093d040c97fbcc1a3669/bin:/home/pkgeval/.julia/artifacts/110c1594febf9d894b6e4a30b3eeca0fa435f04f/bin:/home/pkgeval/.julia/artifacts/e85c0a68e07fee0ee7b19c2abc210b1af2f4771a/bin:/usr/local/bin:/usr/local/sbin:/usr/bin:/usr/sbin:/bin:/sbin:/opt/julia/bin", "DISPLAY=:1", "PKGEVAL=true", "LANG=C.UTF-8"]), ProcessExited(15)) [15] Stacktrace: [1] pipeline_error(proc::Base.Process) @ Base process.jl:651 [inlined] [2] run(::Cmd; wait::Bool, cancel::Base.UseDefaultToken) @ Base process.jl:558 [3] run @ ./process.jl:553 [inlined] [4] run_lamem(ParamFile::String, cores::Int64, args::String; wait::Bool, deactivate_multithreads::Bool) @ LaMEM.Run ~/.julia/packages/LaMEM/oqMYk/src/run_lamem.jl:0 [5] run_lamem(ParamFile::String, cores::Int64, args::String) @ LaMEM.Run ~/.julia/packages/LaMEM/oqMYk/src/run_lamem.jl:50 [6] top-level scope @ ~/.julia/packages/LaMEM/oqMYk/test/runLaMEM.jl:7 [7] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2247 [inlined] [8] macro expansion @ ~/.julia/packages/LaMEM/oqMYk/test/runLaMEM.jl:36 [inlined] Saved file: test_data.vts Saved file: test_data_phase.vts read LaMEM output: Error During Test at /home/pkgeval/.julia/packages/LaMEM/oqMYk/test/read_timestep.jl:5 Got exception outside of a @test SystemError: opening file "/home/pkgeval/.julia/packages/LaMEM/oqMYk/test/example_1/example_1/example_phase/example_2/example_1/PlumeLithosphereInteraction_passive_tracers.pvd": No such file or directory Stacktrace: [1] systemerror(p::String, errno::Int32; extrainfo::Nothing) @ Base error.jl:188 [2] open(fname::String; lock::Bool, read::Nothing, write::Nothing, create::Nothing, truncate::Nothing, append::Nothing) @ Base iostream.jl:332 [3] open(fname::String) @ Base iostream.jl:311 [inlined] [4] open(f::Base.var"#378#379"{@Kwargs{}}, args::String; kwargs::@Kwargs{}) @ Base io.jl:449 [inlined] [5] open(f::Base.var"#378#379"{@Kwargs{}}, args::String) @ Base io.jl:448 [inlined] [6] readlines(filename::String; kw::@Kwargs{}) @ Base io.jl:795 [7] readlines(filename::String) @ Base io.jl:794 [inlined] [8] readPVD(FileName::String) @ LaMEM.IO_functions ~/.julia/packages/LaMEM/oqMYk/src/read_timestep.jl:381 [9] read_LaMEM_simulation(FileName::String, DirName::String; phase::Bool, surf::Bool, passive_tracers::Bool) @ LaMEM.IO_functions ~/.julia/packages/LaMEM/oqMYk/src/read_timestep.jl:591 [10] read_LaMEM_timestep(FileName::String, TimeStep::Int64, DirName::String; fields::Nothing, phase::Bool, surf::Bool, passive_tracers::Bool, last::Bool) @ LaMEM.IO_functions ~/.julia/packages/LaMEM/oqMYk/src/read_timestep.jl:548 [11] top-level scope @ ~/.julia/packages/LaMEM/oqMYk/test/read_timestep.jl:8 [12] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2247 [inlined] [13] macro expansion @ ~/.julia/packages/LaMEM/oqMYk/test/read_timestep.jl:51 [inlined] No partitioning file required for 1 core model setup run lamem mode save grid test: Test Failed at /home/pkgeval/.julia/packages/LaMEM/oqMYk/test/run_lamem_save_grid_test.jl:12 Expression: out == "ProcessorPartitioning_8cpu_2.2.2.bin" Evaluated: nothing == "ProcessorPartitioning_8cpu_2.2.2.bin" Stacktrace: [1] top-level scope @ ~/.julia/packages/LaMEM/oqMYk/test/run_lamem_save_grid_test.jl:5 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2247 [inlined] [3] macro expansion @ ~/.julia/packages/LaMEM/oqMYk/test/run_lamem_save_grid_test.jl:12 [inlined] [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:784 [inlined] Saved file: Model3D.vts Test mesh refinement: Error During Test at /home/pkgeval/.julia/packages/LaMEM/oqMYk/test/mesh_refinement_test.jl:7 Got exception outside of a @test LoadError: UndefVarError: `@var` not defined in `Base.Docs` Suggestion: check for spelling errors or missing imports. Stacktrace: [1] fl_lower(ex::Expr, mod::Module, filename::String, lineno::Int64, world::UInt64, warn::Bool) @ Base flfrontend.jl:23 [2] eval(m::Module, e::Any) @ Core boot.jl:618 [3] get_doc(structure::Core.TypeEgal{Time}, field::Symbol) @ LaMEM ~/.julia/packages/LaMEM/oqMYk/src/DocUtils.jl:13 [4] write_LaMEM_inputFile(io::IOStream, d::Time) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Time.jl:109 [5] write_LaMEM_inputFile(d::Model, fname::String; dir::String) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:174 [6] write_LaMEM_inputFile(d::Model, fname::String) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:156 [7] create_initialsetup(model::Model, cores::Int64, args::String; verbose::Bool, add_APS::Bool) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:294 [8] run_lamem(model::Model, cores::Int64, args::String; wait::Bool, add_APS::Bool) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:206 [9] run_lamem(model::Model, cores::Int64, args::String) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:201 [inlined] [10] top-level scope @ ~/.julia/packages/LaMEM/oqMYk/test/mesh_refinement_test.jl:13 [11] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2247 [inlined] [12] macro expansion @ ~/.julia/packages/LaMEM/oqMYk/test/mesh_refinement_test.jl:29 [inlined] in expression starting at none:1 | FineGrid | Cores | Nodes | CoarseGrid | CoaCores | Levels | SNES | KSP | TotalTime | CoarseTime | MemNode_Gb | Filename | | --------------- | ----- | ----- | ------------ | -------- | ------ | ---- | --- | --------- | ---------- | ---------- | ------------------------------------------------------------------------------- | | [512, 256, 256] | 512 | - | [32, 16, 16] | 512 | 5 | 1 | 72 | 26.26 | 9.9174 | - | /home/pkgeval/.julia/packages/LaMEM/oqMYk/test/input_files/128_cores_104812.txt | Saved file: Model3D.vts filesize compression: Error During Test at /home/pkgeval/.julia/packages/LaMEM/oqMYk/test/test_compression.jl:6 Got exception outside of a @test LoadError: UndefVarError: `@var` not defined in `Base.Docs` Suggestion: check for spelling errors or missing imports. Stacktrace: [1] fl_lower(ex::Expr, mod::Module, filename::String, lineno::Int64, world::UInt64, warn::Bool) @ Base flfrontend.jl:23 [2] eval(m::Module, e::Any) @ Core boot.jl:618 [3] get_doc(structure::Core.TypeEgal{Time}, field::Symbol) @ LaMEM ~/.julia/packages/LaMEM/oqMYk/src/DocUtils.jl:13 [4] write_LaMEM_inputFile(io::IOStream, d::Time) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Time.jl:109 [5] write_LaMEM_inputFile(d::Model, fname::String; dir::String) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:174 [6] write_LaMEM_inputFile(d::Model, fname::String) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:156 [7] create_initialsetup(model::Model, cores::Int64, args::String; verbose::Bool, add_APS::Bool) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:294 [8] run_lamem(model::Model, cores::Int64, args::String; wait::Bool, add_APS::Bool) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:206 [9] run_lamem(model::Model, cores::Int64, args::String) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:201 [inlined] [10] top-level scope @ ~/.julia/packages/LaMEM/oqMYk/test/test_compression.jl:7 [11] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2247 [inlined] [12] macro expansion @ ~/.julia/packages/LaMEM/oqMYk/test/test_compression.jl:23 [inlined] in expression starting at none:1 rheology = Phase 0 (matrix): rho = 3000.0 eta = 1.0e20 ┌ Warning: Your initial `Temp` grid is constant, as is your initial `Phases` grid. │ Is that intended? │ In most cases, you would want to set some variability in the initial conditions, │ for example with the `GeophysicalModelGenerator` function `add_sphere!(model,cen=(0.0,0.0,0.0), radius=(0.15, ))` └ @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/ErrorChecking.jl:22 Saved file: Model3D.vts GeoParams 0D rheology: Error During Test at /home/pkgeval/.julia/packages/LaMEM/oqMYk/test/test_GeoParams_integration.jl:5 Got exception outside of a @test LoadError: UndefVarError: `@var` not defined in `Base.Docs` Suggestion: check for spelling errors or missing imports. Stacktrace: [1] fl_lower(ex::Expr, mod::Module, filename::String, lineno::Int64, world::UInt64, warn::Bool) @ Base flfrontend.jl:23 [2] eval(m::Module, e::Any) @ Core boot.jl:618 [3] get_doc(structure::Core.TypeEgal{Time}, field::Symbol) @ LaMEM ~/.julia/packages/LaMEM/oqMYk/src/DocUtils.jl:13 [4] write_LaMEM_inputFile(io::IOStream, d::Time) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Time.jl:109 [5] write_LaMEM_inputFile(d::Model, fname::String; dir::String) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:174 [6] write_LaMEM_inputFile(d::Model, fname::String) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:156 [7] create_initialsetup(model::Model, cores::Int64, args::String; verbose::Bool, add_APS::Bool) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:294 [8] run_lamem(model::Model, cores::Int64, args::String; wait::Bool, add_APS::Bool) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:206 [9] run_lamem(model::Model, cores::Int64, args::String) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:201 [inlined] [10] stress_strainrate_0D(rheology::Phase, ε_vec::Vector{Float64}; n::Int64, T::Int64, nstep_max::Int64, clean::Bool) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Utils.jl:474 [11] top-level scope @ ~/.julia/packages/LaMEM/oqMYk/test/test_GeoParams_integration.jl:7 [12] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2247 [inlined] [13] macro expansion @ ~/.julia/packages/LaMEM/oqMYk/test/test_GeoParams_integration.jl:16 [inlined] in expression starting at none:1 Saved file: Model3D.vts Saved file: Model3D.vts Subduction3D: Error During Test at /home/pkgeval/.julia/packages/LaMEM/oqMYk/test/test_examples.jl:13 Got exception outside of a @test LoadError: UndefVarError: `@var` not defined in `Base.Docs` Suggestion: check for spelling errors or missing imports. Stacktrace: [1] fl_lower(ex::Expr, mod::Module, filename::String, lineno::Int64, world::UInt64, warn::Bool) @ Base flfrontend.jl:23 [2] eval(m::Module, e::Any) @ Core boot.jl:618 [3] get_doc(structure::Core.TypeEgal{Time}, field::Symbol) @ LaMEM ~/.julia/packages/LaMEM/oqMYk/src/DocUtils.jl:13 [4] write_LaMEM_inputFile(io::IOStream, d::Time) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Time.jl:109 [5] write_LaMEM_inputFile(d::Model, fname::String; dir::String) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:174 [6] write_LaMEM_inputFile(d::Model, fname::String) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:156 [7] create_initialsetup(model::Model, cores::Int64, args::String; verbose::Bool, add_APS::Bool) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:294 [8] run_lamem(model::Model, cores::Int64, args::String; wait::Bool, add_APS::Bool) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:206 [9] run_lamem(model::Model, cores::Int64, args::String) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:201 [inlined] [10] top-level scope @ ~/.julia/packages/LaMEM/oqMYk/example_scripts/Subduction3D.jl:99 [11] include(mapexpr::Function, mod::Module, _path::String) @ Base Base.jl:335 [12] top-level scope @ ~/.julia/packages/LaMEM/oqMYk/test/test_examples.jl:6 [13] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2247 [inlined] [14] macro expansion @ ~/.julia/packages/LaMEM/oqMYk/test/test_examples.jl:14 [inlined] [15] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2247 [inlined] [16] macro expansion @ ~/.julia/packages/LaMEM/oqMYk/test/test_examples.jl:15 [inlined] in expression starting at none:1 in expression starting at /home/pkgeval/.julia/packages/LaMEM/oqMYk/example_scripts/Subduction3D.jl:91 caused by: LoadError: UndefVarError: `@var` not defined in `Base.Docs` Suggestion: check for spelling errors or missing imports. Stacktrace: [1] fl_lower(ex::Expr, mod::Module, filename::String, lineno::Int64, world::UInt64, warn::Bool) @ Base flfrontend.jl:23 [2] eval(m::Module, e::Any) @ Core boot.jl:618 [3] get_doc(structure::Core.TypeEgal{Time}, field::Symbol) @ LaMEM ~/.julia/packages/LaMEM/oqMYk/src/DocUtils.jl:13 [4] write_LaMEM_inputFile(io::IOStream, d::Time) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Time.jl:109 [5] write_LaMEM_inputFile(d::Model, fname::String; dir::String) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:174 [6] write_LaMEM_inputFile(d::Model, fname::String) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:156 [7] create_initialsetup(model::Model, cores::Int64, args::String; verbose::Bool, add_APS::Bool) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:294 [8] run_lamem(model::Model, cores::Int64, args::String; wait::Bool, add_APS::Bool) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:206 [9] run_lamem(model::Model, cores::Int64, args::String) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:201 [10] top-level scope @ ~/.julia/packages/LaMEM/oqMYk/example_scripts/Subduction3D.jl:94 [11] include(mapexpr::Function, mod::Module, _path::String) @ Base Base.jl:335 [12] top-level scope @ ~/.julia/packages/LaMEM/oqMYk/test/test_examples.jl:6 [13] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2247 [inlined] [14] macro expansion @ ~/.julia/packages/LaMEM/oqMYk/test/test_examples.jl:14 [inlined] [15] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2247 [inlined] [16] macro expansion @ ~/.julia/packages/LaMEM/oqMYk/test/test_examples.jl:15 [inlined] in expression starting at none:1 Saved file: Model3D.vts StrengthEnvelop: Error During Test at /home/pkgeval/.julia/packages/LaMEM/oqMYk/test/test_examples.jl:23 Got exception outside of a @test LoadError: UndefVarError: `@var` not defined in `Base.Docs` Suggestion: check for spelling errors or missing imports. Stacktrace: [1] fl_lower(ex::Expr, mod::Module, filename::String, lineno::Int64, world::UInt64, warn::Bool) @ Base flfrontend.jl:23 [2] eval(m::Module, e::Any) @ Core boot.jl:618 [3] get_doc(structure::Core.TypeEgal{Time}, field::Symbol) @ LaMEM ~/.julia/packages/LaMEM/oqMYk/src/DocUtils.jl:13 [4] write_LaMEM_inputFile(io::IOStream, d::Time) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Time.jl:109 [5] write_LaMEM_inputFile(d::Model, fname::String; dir::String) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:174 [6] write_LaMEM_inputFile(d::Model, fname::String) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:156 [7] create_initialsetup(model::Model, cores::Int64, args::String; verbose::Bool, add_APS::Bool) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:294 [8] run_lamem(model::Model, cores::Int64, args::String; wait::Bool, add_APS::Bool) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:206 [9] run_lamem(model::Model, cores::Int64, args::String) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:201 [inlined] [10] top-level scope @ ~/.julia/packages/LaMEM/oqMYk/example_scripts/StrengthEnvelop.jl:25 [11] include(mapexpr::Function, mod::Module, _path::String) @ Base Base.jl:335 [12] top-level scope @ ~/.julia/packages/LaMEM/oqMYk/test/test_examples.jl:6 [13] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2247 [inlined] [14] macro expansion @ ~/.julia/packages/LaMEM/oqMYk/test/test_examples.jl:24 [inlined] [15] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2247 [inlined] [16] macro expansion @ ~/.julia/packages/LaMEM/oqMYk/test/test_examples.jl:25 [inlined] in expression starting at none:1 in expression starting at /home/pkgeval/.julia/packages/LaMEM/oqMYk/example_scripts/StrengthEnvelop.jl:25 Saved file: Model3D.vts Saved file: Model3D.vts TM_Subduction_example: Error During Test at /home/pkgeval/.julia/packages/LaMEM/oqMYk/test/test_examples.jl:33 Got exception outside of a @test LoadError: UndefVarError: `@var` not defined in `Base.Docs` Suggestion: check for spelling errors or missing imports. Stacktrace: [1] fl_lower(ex::Expr, mod::Module, filename::String, lineno::Int64, world::UInt64, warn::Bool) @ Base flfrontend.jl:23 [2] eval(m::Module, e::Any) @ Core boot.jl:618 [3] get_doc(structure::Core.TypeEgal{Time}, field::Symbol) @ LaMEM ~/.julia/packages/LaMEM/oqMYk/src/DocUtils.jl:13 [4] write_LaMEM_inputFile(io::IOStream, d::Time) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Time.jl:109 [5] write_LaMEM_inputFile(d::Model, fname::String; dir::String) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:174 [6] write_LaMEM_inputFile(d::Model, fname::String) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:156 [7] create_initialsetup(model::Model, cores::Int64, args::String; verbose::Bool, add_APS::Bool) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:294 [8] run_lamem(model::Model, cores::Int64, args::String; wait::Bool, add_APS::Bool) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:206 [9] run_lamem(model::Model, cores::Int64, args::String) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:201 [inlined] [10] top-level scope @ ~/.julia/packages/LaMEM/oqMYk/example_scripts/TM_Subduction_example.jl:249 [11] include(mapexpr::Function, mod::Module, _path::String) @ Base Base.jl:335 [12] top-level scope @ ~/.julia/packages/LaMEM/oqMYk/test/test_examples.jl:6 [13] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2247 [inlined] [14] macro expansion @ ~/.julia/packages/LaMEM/oqMYk/test/test_examples.jl:34 [inlined] [15] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2247 [inlined] [16] macro expansion @ ~/.julia/packages/LaMEM/oqMYk/test/test_examples.jl:35 [inlined] in expression starting at none:1 in expression starting at /home/pkgeval/.julia/packages/LaMEM/oqMYk/example_scripts/TM_Subduction_example.jl:241 caused by: LoadError: UndefVarError: `@var` not defined in `Base.Docs` Suggestion: check for spelling errors or missing imports. Stacktrace: [1] fl_lower(ex::Expr, mod::Module, filename::String, lineno::Int64, world::UInt64, warn::Bool) @ Base flfrontend.jl:23 [2] eval(m::Module, e::Any) @ Core boot.jl:618 [3] get_doc(structure::Core.TypeEgal{Time}, field::Symbol) @ LaMEM ~/.julia/packages/LaMEM/oqMYk/src/DocUtils.jl:13 [4] write_LaMEM_inputFile(io::IOStream, d::Time) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Time.jl:109 [5] write_LaMEM_inputFile(d::Model, fname::String; dir::String) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:174 [6] write_LaMEM_inputFile(d::Model, fname::String) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:156 [7] create_initialsetup(model::Model, cores::Int64, args::String; verbose::Bool, add_APS::Bool) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:294 [8] run_lamem(model::Model, cores::Int64, args::String; wait::Bool, add_APS::Bool) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:206 [9] run_lamem(model::Model, cores::Int64, args::String) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:201 [10] top-level scope @ ~/.julia/packages/LaMEM/oqMYk/example_scripts/TM_Subduction_example.jl:244 [11] include(mapexpr::Function, mod::Module, _path::String) @ Base Base.jl:335 [12] top-level scope @ ~/.julia/packages/LaMEM/oqMYk/test/test_examples.jl:6 [13] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2247 [inlined] [14] macro expansion @ ~/.julia/packages/LaMEM/oqMYk/test/test_examples.jl:34 [inlined] [15] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2247 [inlined] [16] macro expansion @ ~/.julia/packages/LaMEM/oqMYk/test/test_examples.jl:35 [inlined] in expression starting at none:1 Saved file: Model3D.vts PassiveTracers: Error During Test at /home/pkgeval/.julia/packages/LaMEM/oqMYk/test/test_examples.jl:45 Got exception outside of a @test LoadError: UndefVarError: `@var` not defined in `Base.Docs` Suggestion: check for spelling errors or missing imports. Stacktrace: [1] fl_lower(ex::Expr, mod::Module, filename::String, lineno::Int64, world::UInt64, warn::Bool) @ Base flfrontend.jl:23 [2] eval(m::Module, e::Any) @ Core boot.jl:618 [3] get_doc(structure::Core.TypeEgal{Time}, field::Symbol) @ LaMEM ~/.julia/packages/LaMEM/oqMYk/src/DocUtils.jl:13 [4] write_LaMEM_inputFile(io::IOStream, d::Time) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Time.jl:109 [5] write_LaMEM_inputFile(d::Model, fname::String; dir::String) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:174 [6] write_LaMEM_inputFile(d::Model, fname::String) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:156 [7] create_initialsetup(model::Model, cores::Int64, args::String; verbose::Bool, add_APS::Bool) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:294 [8] run_lamem(model::Model, cores::Int64, args::String; wait::Bool, add_APS::Bool) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:206 [9] run_lamem(model::Model, cores::Int64, args::String) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:201 [inlined] [10] top-level scope @ ~/.julia/packages/LaMEM/oqMYk/example_scripts/PassiveTracers.jl:13 [11] include(mapexpr::Function, mod::Module, _path::String) @ Base Base.jl:335 [12] top-level scope @ ~/.julia/packages/LaMEM/oqMYk/test/test_examples.jl:6 [13] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2247 [inlined] [14] macro expansion @ ~/.julia/packages/LaMEM/oqMYk/test/test_examples.jl:46 [inlined] [15] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2247 [inlined] [16] macro expansion @ ~/.julia/packages/LaMEM/oqMYk/test/test_examples.jl:47 [inlined] in expression starting at none:1 in expression starting at /home/pkgeval/.julia/packages/LaMEM/oqMYk/example_scripts/PassiveTracers.jl:13 Saved file: Model3D.vts surface erosion: Error During Test at /home/pkgeval/.julia/packages/LaMEM/oqMYk/test/test_erosion.jl:7 Got exception outside of a @test LoadError: UndefVarError: `@var` not defined in `Base.Docs` Suggestion: check for spelling errors or missing imports. Stacktrace: [1] fl_lower(ex::Expr, mod::Module, filename::String, lineno::Int64, world::UInt64, warn::Bool) @ Base flfrontend.jl:23 [2] eval(m::Module, e::Any) @ Core boot.jl:618 [3] get_doc(structure::Core.TypeEgal{Time}, field::Symbol) @ LaMEM ~/.julia/packages/LaMEM/oqMYk/src/DocUtils.jl:13 [4] write_LaMEM_inputFile(io::IOStream, d::Time) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Time.jl:109 [5] write_LaMEM_inputFile(d::Model, fname::String; dir::String) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:174 [6] write_LaMEM_inputFile(d::Model, fname::String) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:156 [7] create_initialsetup(model::Model, cores::Int64, args::String; verbose::Bool, add_APS::Bool) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:294 [8] run_lamem(model::Model, cores::Int64, args::String; wait::Bool, add_APS::Bool) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:206 [9] run_lamem(model::Model, cores::Int64, args::String) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:201 [inlined] [10] top-level scope @ ~/.julia/packages/LaMEM/oqMYk/test/test_erosion.jl:8 [11] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2247 [inlined] [12] macro expansion @ ~/.julia/packages/LaMEM/oqMYk/test/test_erosion.jl:46 [inlined] in expression starting at none:1 Saved file: Model3D.vts sedimentation test: Error During Test at /home/pkgeval/.julia/packages/LaMEM/oqMYk/test/test_sedimentation.jl:7 Got exception outside of a @test LoadError: UndefVarError: `@var` not defined in `Base.Docs` Suggestion: check for spelling errors or missing imports. Stacktrace: [1] fl_lower(ex::Expr, mod::Module, filename::String, lineno::Int64, world::UInt64, warn::Bool) @ Base flfrontend.jl:23 [2] eval(m::Module, e::Any) @ Core boot.jl:618 [3] get_doc(structure::Core.TypeEgal{Time}, field::Symbol) @ LaMEM ~/.julia/packages/LaMEM/oqMYk/src/DocUtils.jl:13 [4] write_LaMEM_inputFile(io::IOStream, d::Time) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Time.jl:109 [5] write_LaMEM_inputFile(d::Model, fname::String; dir::String) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:174 [6] write_LaMEM_inputFile(d::Model, fname::String) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:156 [7] create_initialsetup(model::Model, cores::Int64, args::String; verbose::Bool, add_APS::Bool) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:294 [8] run_lamem(model::Model, cores::Int64, args::String; wait::Bool, add_APS::Bool) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:206 [9] run_lamem(model::Model, cores::Int64, args::String) @ LaMEM.LaMEM_Model ~/.julia/packages/LaMEM/oqMYk/src/LaMEM_ModelGeneration/Model.jl:201 [inlined] [10] top-level scope @ ~/.julia/packages/LaMEM/oqMYk/test/test_sedimentation.jl:8 [11] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2247 [inlined] [12] macro expansion @ ~/.julia/packages/LaMEM/oqMYk/test/test_sedimentation.jl:43 [inlined] in expression starting at none:1 Test Summary: | Pass Fail Error Total Time LaMEM.jl | 9 1 16 26 2m48.2s Julia setup | 1 1 52.5s velocity box | 1 1 0.9s phase transitions | 1 1 6.9s phase diagrams | 1 1 3.2s build-in geometries | 1 1 0.7s run LaMEM | 2 1 3 17.5s read LaMEM output | 5 1 6 42.6s run lamem mode save grid test | 1 1 2 12.4s Test mesh refinement | 1 1 1.8s Read logfile | 1 1 1.2s filesize compression | 1 1 0.3s GeoParams 0D rheology | 1 1 1.2s examples in /scripts | 4 4 22.0s Subduction3D | 1 1 8.2s StrengthEnvelop | 1 1 2.4s TM_Subduction_example | 1 1 10.3s PassiveTracers | 1 1 1.1s surface erosion | 1 1 2.5s sedimentation test | 1 1 0.2s RNG of the outermost testset: Random.Xoshiro(0x0b6154cbcc89adec, 0x5b2615cf7cb9faf5, 0x2143fc218d55de3c, 0x2db2f6146926d07d, 0x030c3d70e574a962) ERROR: LoadError: Some tests did not pass: 9 passed, 1 failed, 16 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/LaMEM/oqMYk/test/runtests.jl:4 Testing failed after 206.81s ERROR: LoadError: Package LaMEM errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3283 [3] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:587 [4] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172 [5] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [6] test(pkg::String; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [inlined] [7] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:223 in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 PkgEval failed after 413.95s: package tests unexpectedly errored