Package evaluation to test DEMetropolis on Julia 1.14.0-DEV.3055 (7e75a8061a*) started at 2026-08-27T21:31:46.160 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 14.62s ################################################################################ # Installation # Installing DEMetropolis... Resolving package versions... Installed Rmath_jll ─────────────────── v0.5.2+0 Installed CommonSolve ───────────────── v0.2.14 Installed HypergeometricFunctions ───── v0.3.30 Installed FillArrays ────────────────── v1.17.0 Installed DataStructures ────────────── v0.19.6 Installed MacroTools ────────────────── v0.5.16 Installed StatsBase ─────────────────── v0.34.13 Installed CompositionsBase ──────────── v0.1.2 Installed ConstructionBase ──────────── v1.6.0 Installed OrderedCollections ────────── v2.0.1 Installed AliasTables ───────────────── v1.1.3 Installed IteratorInterfaceExtensions ─ v1.0.0 Installed DataAPI ───────────────────── v1.16.0 Installed StatsAPI ──────────────────── v1.8.0 Installed DataValueInterfaces ───────── v1.0.0 Installed Statistics ────────────────── v1.11.1 Installed ProgressMeter ─────────────── v1.11.0 Installed MCMCDiagnosticTools ───────── v0.3.19 Installed ArgCheck ──────────────────── v2.5.0 Installed PrecompileTools ───────────── v1.3.4 Installed LogExpFunctions ───────────── v1.0.1 Installed OpenSpecFun_jll ───────────── v0.5.6+0 Installed IrrationalConstants ───────── v0.2.6 Installed LogDensityProblems ────────── v2.2.0 Installed Roots ─────────────────────── v3.0.7 Installed QuadGK ────────────────────── v2.11.3 Installed AbstractFFTs ──────────────── v1.5.0 Installed Distributions ─────────────── v0.25.131 Installed StatsFuns ─────────────────── v2.2.1 Installed Gamma ─────────────────────── v1.2.0 Installed Tables ────────────────────── v1.14.0 Installed SpecialFunctions ──────────── v2.9.0 Installed PtrArrays ─────────────────── v1.4.0 Installed Rmath ─────────────────────── v0.9.0 Installed DEMetropolis ──────────────── v1.0.0 Installed InverseFunctions ──────────── v0.1.17 Installed Reexport ──────────────────── v1.2.2 Installed ScientificTypesBase ───────── v3.1.0 Installed Missings ──────────────────── v1.2.0 Installed SortingAlgorithms ─────────── v1.2.3 Installed PDMats ────────────────────── v0.11.41 Installed Preferences ───────────────── v1.5.2 Installed JLLWrappers ───────────────── v1.8.0 Installed TableTraits ───────────────── v1.0.1 Installed Accessors ─────────────────── v0.1.45 Installed StatisticalTraits ─────────── v3.5.0 Installed DocStringExtensions ───────── v0.9.5 Installed MLJModelInterface ─────────── v1.12.1 Installing 2 artifacts Installed artifact Rmath 111.3 KiB Installed artifact OpenSpecFun 105.4 KiB Updating `~/.julia/environments/v1.14/Project.toml` [b4be8cd2] + DEMetropolis v1.0.0 Updating `~/.julia/environments/v1.14/Manifest.toml` [621f4979] + AbstractFFTs v1.5.0 [7d9f7c33] + Accessors v0.1.45 [66dad0bd] + AliasTables v1.1.3 [dce04be8] + ArgCheck v2.5.0 [38540f10] + CommonSolve v0.2.14 [a33af91c] + CompositionsBase v0.1.2 [187b0558] + ConstructionBase v1.6.0 [b4be8cd2] + DEMetropolis v1.0.0 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.19.6 [e2d170a0] + DataValueInterfaces v1.0.0 [31c24e10] + Distributions v0.25.131 [ffbed154] + DocStringExtensions v0.9.5 [1a297f60] + FillArrays v1.17.0 [a0844989] + Gamma v1.2.0 [34004b35] + HypergeometricFunctions v0.3.30 [3587e190] + InverseFunctions v0.1.17 [92d709cd] + IrrationalConstants v0.2.6 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.8.0 [6fdf6af0] + LogDensityProblems v2.2.0 [2ab3a3ac] + LogExpFunctions v1.0.1 [be115224] + MCMCDiagnosticTools v0.3.19 [e80e1ace] + MLJModelInterface v1.12.1 [1914dd2f] + MacroTools v0.5.16 [e1d29d7a] + Missings v1.2.0 [bac558e1] + OrderedCollections v2.0.1 [90014a1f] + PDMats v0.11.41 [aea7be01] + PrecompileTools v1.3.4 [21216c6a] + Preferences v1.5.2 [92933f4c] + ProgressMeter v1.11.0 [43287f4e] + PtrArrays v1.4.0 [1fd47b50] + QuadGK v2.11.3 [189a3867] + Reexport v1.2.2 [79098fc4] + Rmath v0.9.0 [f2b01f46] + Roots v3.0.7 [30f210dd] + ScientificTypesBase v3.1.0 [a2af1166] + SortingAlgorithms v1.2.3 [276daf66] + SpecialFunctions v2.9.0 [64bff920] + StatisticalTraits v3.5.0 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 [2913bbd2] + StatsBase v0.34.13 [4c63d2b9] + StatsFuns v2.2.1 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.14.0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.2+0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.12.0 [7b1f6079] + FileWatching v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.14.0 [d6f4376e] + Markdown v1.11.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.13.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.13.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.5.7+0 [4536629a] + OpenBLAS_jll v0.3.34+0 [05823500] + OpenLibm_jll v0.8.7+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [8e850b90] + libblastrampoline_jll v5.15.0+0 Installation completed after 8.22s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling project... 4.5 s ✓ TestEnv 1 dependency successfully precompiled in 5 seconds. 27 already precompiled. Precompiling package dependencies... Precompiling project... 3.2 s ✓ MacroTools 0.9 s ✓ Reexport 0.8 s ✓ Statistics 0.7 s ✓ DataAPI 0.7 s ✓ ConstructionBase 1.9 s ✓ IrrationalConstants 0.5 s ✓ DataValueInterfaces 0.6 s ✓ StaticArraysCore 0.5 s ✓ StatsAPI 1.0 s ✓ OrderedCollections 0.7 s ✓ InverseFunctions 0.5 s ✓ CompositionsBase 0.9 s ✓ DocStringExtensions 0.8 s ✓ AbstractFFTs 0.6 s ✓ ArgCheck 2.4 s ✓ FillArrays 0.6 s ✓ PtrArrays 0.7 s ✓ IteratorInterfaceExtensions 0.6 s ✓ NaNMath 2.3 s ✓ PDMats 2.5 s ✓ ProgressMeter 1.1 s ✓ ScientificTypesBase 0.8 s ✓ Compat 1.2 s ✓ Preferences 0.9 s ✓ CommonSubexpressions 1.5 s ✓ Statistics → SparseArraysExt 0.6 s ✓ Missings 0.5 s ✓ ConstructionBase → ConstructionBaseLinearAlgebraExt 0.6 s ✓ DiffResults 3.3 s ✓ DataStructures 1.9 s ✓ InverseFunctions → InverseFunctionsTestExt 1.3 s ✓ InverseFunctions → InverseFunctionsDatesExt 0.5 s ✓ CompositionsBase → CompositionsBaseInverseFunctionsExt 1.1 s ✓ LogExpFunctions 3.8 s ✓ AbstractFFTs → AbstractFFTsTestExt 1.7 s ✓ LogDensityProblems 2.0 s ✓ FillArrays → FillArraysSparseArraysExt 0.9 s ✓ FillArrays → FillArraysStatisticsExt 0.7 s ✓ AliasTables 0.5 s ✓ TableTraits 1.9 s ✓ FillArrays → FillArraysPDMatsExt 1.2 s ✓ StatisticalTraits 0.9 s ✓ Compat → CompatLinearAlgebraExt 1.6 s ✓ JLLWrappers 1.2 s ✓ PrecompileTools 0.9 s ✓ SortingAlgorithms 1.8 s ✓ QuadGK 4.0 s ✓ Accessors 0.6 s ✓ LogExpFunctions → LogExpFunctionsInverseFunctionsExt 1.5 s ✓ Gamma 1.6 s ✓ Tables 3.3 s ✓ MLJModelInterface 1.5 s ✓ Rmath_jll 1.3 s ✓ OpenSpecFun_jll 14.0 s ✓ StaticArrays 2.0 s ✓ CommonSolve 4.8 s ✓ StatsBase 2.3 s ✓ Accessors → LinearAlgebraExt 1.8 s ✓ Accessors → TestExt 1.9 s ✓ HypergeometricFunctions 1.5 s ✓ Rmath 5.1 s ✓ SpecialFunctions 1.3 s ✓ StaticArrays → StaticArraysStatisticsExt 1.3 s ✓ ConstructionBase → ConstructionBaseStaticArraysExt 1.9 s ✓ FillArrays → FillArraysStaticArraysExt 1.5 s ✓ Accessors → StaticArraysExt 1.9 s ✓ PDMats → StatsBaseExt 5.5 s ✓ Roots 1.2 s ✓ DiffRules 2.5 s ✓ StatsFuns 7.1 s ✓ ForwardDiff 0.9 s ✓ StatsFuns → StatsFunsInverseFunctionsExt 2.0 s ✓ ForwardDiff → ForwardDiffStaticArraysExt 1.3 s ✓ Roots → RootsForwardDiffExt 10.5 s ✓ Distributions 3.6 s ✓ TransformVariables 4.6 s ✓ Distributions → DistributionsTestExt 6.2 s ✓ MCMCDiagnosticTools 2.2 s ✓ TransformVariables → AccessorsExt 1.8 s ✓ TransformVariables → InverseFunctionsExt 1.9 s ✓ TransformedLogDensities 6.7 s ✓ DEMetropolis 82 dependencies successfully precompiled in 171 seconds. 19 already precompiled. Precompilation completed after 192.92s ################################################################################ # Testing # Testing DEMetropolis Status `/tmp/jl_J6LIyj/Project.toml` [b4be8cd2] DEMetropolis v1.0.0 [31c24e10] Distributions v0.25.131 [6fdf6af0] LogDensityProblems v2.2.0 [be115224] MCMCDiagnosticTools v0.3.19 [92933f4c] ProgressMeter v1.11.0 [10745b16] Statistics v1.11.1 [2913bbd2] StatsBase v0.34.13 [84d833dd] TransformVariables v0.8.26 [f9bc47f6] TransformedLogDensities v1.1.1 [37e2e46d] LinearAlgebra v1.14.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_J6LIyj/Manifest.toml` [621f4979] AbstractFFTs v1.5.0 [7d9f7c33] Accessors v0.1.45 [66dad0bd] AliasTables v1.1.3 [dce04be8] ArgCheck v2.5.0 [38540f10] CommonSolve v0.2.14 [bbf7d656] CommonSubexpressions v0.3.1 [34da2185] Compat v4.18.1 [a33af91c] CompositionsBase v0.1.2 [187b0558] ConstructionBase v1.6.0 [b4be8cd2] DEMetropolis v1.0.0 [9a962f9c] DataAPI v1.16.0 [864edb3b] DataStructures v0.19.6 [e2d170a0] DataValueInterfaces v1.0.0 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.16.0 [31c24e10] Distributions v0.25.131 [ffbed154] DocStringExtensions v0.9.5 [1a297f60] FillArrays v1.17.0 [f6369f11] ForwardDiff v1.4.5 [a0844989] Gamma v1.2.0 [34004b35] HypergeometricFunctions v0.3.30 [3587e190] InverseFunctions v0.1.17 [92d709cd] IrrationalConstants v0.2.6 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.8.0 [6fdf6af0] LogDensityProblems v2.2.0 [2ab3a3ac] LogExpFunctions v1.0.1 [be115224] MCMCDiagnosticTools v0.3.19 [e80e1ace] MLJModelInterface v1.12.1 [1914dd2f] MacroTools v0.5.16 [e1d29d7a] Missings v1.2.0 [77ba4419] NaNMath v1.1.4 [bac558e1] OrderedCollections v2.0.1 [90014a1f] PDMats v0.11.41 [aea7be01] PrecompileTools v1.3.4 [21216c6a] Preferences v1.5.2 [92933f4c] ProgressMeter v1.11.0 [43287f4e] PtrArrays v1.4.0 [1fd47b50] QuadGK v2.11.3 [189a3867] Reexport v1.2.2 [79098fc4] Rmath v0.9.0 [f2b01f46] Roots v3.0.7 [30f210dd] ScientificTypesBase v3.1.0 [a2af1166] SortingAlgorithms v1.2.3 [276daf66] SpecialFunctions v2.9.0 [90137ffa] StaticArrays v1.9.19 [1e83bf80] StaticArraysCore v1.4.4 [64bff920] StatisticalTraits v3.5.0 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.8.0 [2913bbd2] StatsBase v0.34.13 [4c63d2b9] StatsFuns v2.2.1 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.14.0 [84d833dd] TransformVariables v0.8.26 [f9bc47f6] TransformedLogDensities v1.1.1 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.2+0 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.12.0 [7b1f6079] FileWatching v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.14.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.13.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.13.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.5.7+0 [4536629a] OpenBLAS_jll v0.3.34+0 [05823500] OpenLibm_jll v0.8.7+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [8e850b90] libblastrampoline_jll v5.15.0+0 Testing Running tests... Burnin 1: 40%|████████████████▍ | ETA: 0:00:17 Burnin 1: 100%|█████████████████████████████████████████| Time: 0:00:11 composite sampler: Error During Test at /home/pkgeval/.julia/packages/DEMetropolis/ovbg2/test/runtests.jl:29 Got exception outside of a @test MethodError: no method matching reducedim1(::Matrix{Float64}, ::Matrix{Float64}) The function `reducedim1` exists, but no method is defined for this combination of argument types. Closest candidates are: reducedim1(::Any) @ Base reducedim.jl:1229 Stacktrace: [1] centralize_sumabs2!(R::Matrix{Float64}, A::Matrix{Float64}, means::Matrix{Float64}) @ Statistics ~/.julia/packages/Statistics/gbcbG/src/Statistics.jl:282 [2] varm!(R::Matrix{Float64}, A::Matrix{Float64}, m::Matrix{Float64}; corrected::Bool) @ Statistics ~/.julia/packages/Statistics/gbcbG/src/Statistics.jl:309 [3] _varm(A::Matrix{Float64}, m::Matrix{Float64}, corrected::Bool, region::Int64) @ Statistics ~/.julia/packages/Statistics/gbcbG/src/Statistics.jl:341 [4] varm(A::Matrix{Float64}, m::Matrix{Float64}; corrected::Bool, dims::Int64) @ Statistics ~/.julia/packages/Statistics/gbcbG/src/Statistics.jl:339 [inlined] [5] _var(A::Matrix{Float64}, corrected::Bool, mean::Nothing, dims::Int64) @ Statistics ~/.julia/packages/Statistics/gbcbG/src/Statistics.jl:386 [inlined] [6] var(A::Matrix{Float64}; corrected::Bool, mean::Nothing, dims::Int64) @ Statistics ~/.julia/packages/Statistics/gbcbG/src/Statistics.jl:380 [inlined] [7] update_jumping_distance!(adaptation::DEMetropolis.adaptive_subspace_sampling{Float64}, x::Vector{Float64}, z::Vector{Float64}, chains::DEMetropolis.chains_memory{Float64}, accepted::Bool, cr::Float64) @ DEMetropolis ~/.julia/packages/DEMetropolis/ovbg2/src/updates.jl:260 [8] update!(update::DEMetropolis.subspace_sampling, chains::DEMetropolis.chains_memory{Float64}, ld::TransformedLogDensity{TransformVariables.ArrayTransformation{TransformVariables.Identity, 1}, typeof(ld_normal)}, rng::Xoshiro, chain::Int64) @ DEMetropolis ~/.julia/packages/DEMetropolis/ovbg2/src/updates.jl:253 [9] update_chains!(ld::TransformedLogDensity{TransformVariables.ArrayTransformation{TransformVariables.Identity, 1}, typeof(ld_normal)}, rngs::Vector{Xoshiro}, chains::DEMetropolis.chains_memory{Float64}, sampler_scheme::DEMetropolis.sampler_scheme_multi) @ DEMetropolis ~/.julia/packages/DEMetropolis/ovbg2/src/update_chain.jl:4 [10] epoch!(iterations::UnitRange{Int64}, rngs::Vector{Xoshiro}, chains::DEMetropolis.chains_memory{Float64}, ld::TransformedLogDensity{TransformVariables.ArrayTransformation{TransformVariables.Identity, 1}, typeof(ld_normal)}, sampler_scheme::DEMetropolis.sampler_scheme_multi, update_chains_func!::typeof(DEMetropolis.update_chains!), desc::String) @ DEMetropolis ~/.julia/packages/DEMetropolis/ovbg2/src/update_chain.jl:30 [11] composite_sampler(ld::TransformedLogDensity{TransformVariables.ArrayTransformation{TransformVariables.Identity, 1}, typeof(ld_normal)}, n_its::Int64, n_chains::Int64, memory::Bool, initial_state::Matrix{Float64}, sampler_scheme::DEMetropolis.sampler_scheme_multi; thin::Int64, save_burnt::Bool, rng::MersenneTwister, n_burnin::Int64, parallel::Bool, diagnostic_checks::Vector{DEMetropolis.diagnostic_check_struct}, check_epochs::Int64) @ DEMetropolis ~/.julia/packages/DEMetropolis/ovbg2/src/sampler.jl:160 [12] top-level scope @ ~/.julia/packages/DEMetropolis/ovbg2/test/runtests.jl:30 [13] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2247 [inlined] [14] macro expansion @ ~/.julia/packages/DEMetropolis/ovbg2/test/runtests.jl:32 [inlined] Test Summary: | Error Total Time composite sampler | 1 1 56.2s RNG of the outermost testset: Xoshiro(0x276f72fde2097ab2, 0x319301d3df6a3785, 0x945a99fab0d5e4a8, 0xd7816376c9f6bdae, 0x8677329e7a34c84b) ERROR: LoadError: Some tests did not pass: 0 passed, 0 failed, 1 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/DEMetropolis/ovbg2/test/runtests.jl:29 Testing failed after 83.9s ERROR: LoadError: Package DEMetropolis errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3283 [3] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:587 [4] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172 [5] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [6] test(pkg::String; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [inlined] [7] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:223 in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 PkgEval failed after 340.51s: package tests unexpectedly errored