Package evaluation to test COCOA on Julia 1.14.0-DEV.3055 (7e75a8061a*) started at 2026-08-28T02:17:13.575 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 15.48s ################################################################################ # Installation # Installing COCOA... Resolving package versions... Installed OnlineStatsBase ───────────── v1.7.3 Installed ForwardDiff ───────────────── v1.4.5 Installed DataStructures ────────────── v0.19.6 Installed DiffResults ───────────────── v1.1.0 Installed AbstractTrees ─────────────── v0.4.5 Installed MacroTools ────────────────── v0.5.16 Installed HiGHS ─────────────────────── v1.25.0 Installed SBML ──────────────────────── v1.6.0 Installed JLD2 ──────────────────────── v0.5.15 Installed Bzip2_jll ─────────────────── v1.0.9+0 Installed InlineStrings ─────────────── v1.4.5 Installed CodecZlib ─────────────────── v0.7.9 Installed StatsBase ─────────────────── v0.34.13 Installed OrderedCollections ────────── v1.8.2 Installed AliasTables ───────────────── v1.1.3 Installed ArnoldiMethod ─────────────── v0.4.0 Installed ConstructionBase ──────────── v1.6.0 Installed HashArrayMappedTries ──────── v0.2.0 Installed Compat ────────────────────── v4.18.1 Installed Combinatorics ─────────────── v1.1.0 Installed SBMLFBCModels ─────────────── v1.1.1 Installed TranscodingStreams ────────── v0.11.3 Installed IteratorInterfaceExtensions ─ v1.0.0 Installed InvertedIndices ───────────── v1.3.1 Installed StatsAPI ──────────────────── v1.8.0 Installed ConstraintTrees ───────────── v1.11.1 Installed DataAPI ───────────────────── v1.16.0 Installed Statistics ────────────────── v1.11.1 Installed PrecompileTools ───────────── v1.3.4 Installed JuMP ──────────────────────── v1.31.2 Installed SentinelArrays ────────────── v1.4.10 Installed StructUtils ───────────────── v2.8.5 Installed StaticArrays ──────────────── v1.9.19 Installed FileIO ────────────────────── v1.20.0 Installed DataValueInterfaces ───────── v1.0.0 Installed StaticArraysCore ──────────── v1.4.4 Installed CommonSubexpressions ──────── v0.3.1 Installed COCOA ─────────────────────── v1.0.0 Installed NaNMath ───────────────────── v1.1.4 Installed StringManipulation ────────── v0.5.0 Installed SimpleTraits ──────────────── v0.9.6 Installed LogExpFunctions ───────────── v1.0.1 Installed IrrationalConstants ───────── v0.2.6 Installed CodecBzip2 ────────────────── v0.8.5 Installed OpenSpecFun_jll ───────────── v0.5.6+0 Installed AbstractFBCModels ─────────── v1.3.0 Installed Requires ──────────────────── v1.3.1 Installed StableRNGs ────────────────── v1.0.4 Installed PrettyTables ──────────────── v3.4.8 Installed DiffRules ─────────────────── v1.16.0 Installed OpenBLAS32_jll ────────────── v0.3.34+0 Installed Parsers ───────────────────── v2.8.7 Installed JSON ──────────────────────── v1.7.1 Installed Tables ────────────────────── v1.14.0 Installed SBML_jll ──────────────────── v5.21.0+0 Installed IfElse ────────────────────── v0.1.1 Installed ScopedValues ──────────────── v1.6.2 Installed SpecialFunctions ──────────── v2.9.0 Installed COBREXA ───────────────────── v2.9.1 Installed Unitful ───────────────────── v1.28.0 Installed PtrArrays ─────────────────── v1.4.0 Installed XML2_jll ──────────────────── v2.13.9+0 Installed MathOptIIS ────────────────── v0.2.0 Installed Reexport ──────────────────── v1.2.2 Installed DataFrames ────────────────── v1.8.2 Installed MutableArithmetics ────────── v1.8.0 Installed SortingAlgorithms ─────────── v1.2.3 Installed LaTeXStrings ──────────────── v1.4.1 Installed Missings ──────────────────── v1.2.0 Installed PooledArrays ──────────────── v1.4.3 Installed Libiconv_jll ──────────────── v1.18.0+0 Installed JLLWrappers ───────────────── v1.8.0 Installed Preferences ───────────────── v1.5.2 Installed TableTraits ───────────────── v1.0.1 Installed Crayons ───────────────────── v4.2.0 Installed DocStringExtensions ───────── v0.9.5 Installed HiGHS_jll ─────────────────── v1.15.1+1 Installed Inflate ───────────────────── v0.1.5 Installed Graphs ────────────────────── v1.14.0 Installed MathOptInterface ──────────── v1.53.0 Installing 7 artifacts Installed artifact OpenSpecFun 105.4 KiB Installed artifact Bzip2 152.8 KiB Installed artifact OpenBLAS32 5.0 MiB Installed artifact HiGHS 2.5 MiB Installed artifact XML2 2.0 MiB Installed artifact Libiconv 1022.9 KiB Installed artifact SBML 4.2 MiB Updating `~/.julia/environments/v1.14/Project.toml` [9ecc82ce] + COCOA v1.0.0 Updating `~/.julia/environments/v1.14/Manifest.toml` [5a4f3dfa] + AbstractFBCModels v1.3.0 [1520ce14] + AbstractTrees v0.4.5 [66dad0bd] + AliasTables v1.1.3 [ec485272] + ArnoldiMethod v0.4.0 [babc4406] + COBREXA v2.9.1 [9ecc82ce] + COCOA v1.0.0 [523fee87] + CodecBzip2 v0.8.5 [944b1d66] + CodecZlib v0.7.9 [861a8166] + Combinatorics v1.1.0 [bbf7d656] + CommonSubexpressions v0.3.1 [34da2185] + Compat v4.18.1 [5515826b] + ConstraintTrees v1.11.1 [187b0558] + ConstructionBase v1.6.0 [a8cc5b0e] + Crayons v4.2.0 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.8.2 [864edb3b] + DataStructures v0.19.6 [e2d170a0] + DataValueInterfaces v1.0.0 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.16.0 [ffbed154] + DocStringExtensions v0.9.5 [5789e2e9] + FileIO v1.20.0 [f6369f11] + ForwardDiff v1.4.5 [86223c79] + Graphs v1.14.0 [076d061b] + HashArrayMappedTries v0.2.0 [87dc4568] + HiGHS v1.25.0 [615f187c] + IfElse v0.1.1 [d25df0c9] + Inflate v0.1.5 [842dd82b] + InlineStrings v1.4.5 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.6 [82899510] + IteratorInterfaceExtensions v1.0.0 ⌅ [033835bb] + JLD2 v0.5.15 [692b3bcd] + JLLWrappers v1.8.0 [682c06a0] + JSON v1.7.1 [4076af6c] + JuMP v1.31.2 [b964fa9f] + LaTeXStrings v1.4.1 [2ab3a3ac] + LogExpFunctions v1.0.1 [1914dd2f] + MacroTools v0.5.16 [8c4f8055] + MathOptIIS v0.2.0 [b8f27783] + MathOptInterface v1.53.0 [e1d29d7a] + Missings v1.2.0 [d8a4904e] + MutableArithmetics v1.8.0 [77ba4419] + NaNMath v1.1.4 [925886fa] + OnlineStatsBase v1.7.3 ⌅ [bac558e1] + OrderedCollections v1.8.2 ⌅ [69de0a69] + Parsers v2.8.7 [2dfb63ee] + PooledArrays v1.4.3 [aea7be01] + PrecompileTools v1.3.4 [21216c6a] + Preferences v1.5.2 [08abe8d2] + PrettyTables v3.4.8 [43287f4e] + PtrArrays v1.4.0 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [e5567a89] + SBML v1.6.0 [3e8f9d1a] + SBMLFBCModels v1.1.1 [7e506255] + ScopedValues v1.6.2 [91c51154] + SentinelArrays v1.4.10 [699a6c99] + SimpleTraits v0.9.6 [a2af1166] + SortingAlgorithms v1.2.3 [276daf66] + SpecialFunctions v2.9.0 [860ef19b] + StableRNGs v1.0.4 [90137ffa] + StaticArrays v1.9.19 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 [2913bbd2] + StatsBase v0.34.13 [892a3eda] + StringManipulation v0.5.0 [ec057cc2] + StructUtils v2.8.5 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.14.0 [3bb67fe8] + TranscodingStreams v0.11.3 [1986cc42] + Unitful v1.28.0 [6e34b625] + Bzip2_jll v1.0.9+0 [8fd58aa0] + HiGHS_jll v1.15.1+1 [94ce4f54] + Libiconv_jll v1.18.0+0 [656ef2d0] + OpenBLAS32_jll v0.3.34+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [bb12108a] + SBML_jll v5.21.0+0 ⌅ [02c8fc9c] + XML2_jll v2.13.9+0 [0dad84c5] + ArgTools v1.2.0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.12.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0 [b27032c2] + LibCURL v1.0.0 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.14.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.14.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.13.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.13.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.5.7+0 [deac9b47] + LibCURL_jll v8.21.0+0 [e37daf67] + LibGit2_jll v1.9.7+0 [29816b5a] + LibSSH2_jll v1.11.104+0 [14a3606d] + MozillaCACerts_jll v2026.8.13 [4536629a] + OpenBLAS_jll v0.3.34+0 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.8+0 [efcefdf7] + PCRE2_jll v10.47.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.2+0 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.70.0+0 [3f19e933] + p7zip_jll v17.8.2+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 11.36s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling project... 4.9 s ✓ TestEnv 1 dependency successfully precompiled in 5 seconds. 27 already precompiled. Precompiling package dependencies... Precompiling project... 2.1 s ✓ Crayons 3.1 s ✓ MacroTools 1.5 s ✓ InlineStrings 0.5 s ✓ Reexport 0.8 s ✓ Statistics 0.6 s ✓ DataAPI 0.8 s ✓ ConstructionBase 2.2 s ✓ IrrationalConstants 0.5 s ✓ DataValueInterfaces 0.7 s ✓ StaticArraysCore 0.5 s ✓ StatsAPI 1.1 s ✓ OrderedCollections 0.6 s ✓ InvertedIndices 0.7 s ✓ StableRNGs 0.6 s ✓ HashArrayMappedTries 0.8 s ✓ DocStringExtensions 0.9 s ✓ AbstractTrees 2.0 s ✓ Combinatorics 0.7 s ✓ Inflate 0.6 s ✓ IfElse 0.5 s ✓ PtrArrays 0.8 s ✓ TranscodingStreams 0.5 s ✓ IteratorInterfaceExtensions 0.6 s ✓ LaTeXStrings 0.8 s ✓ Requires 0.7 s ✓ NaNMath 1.9 s ✓ SentinelArrays 1.9 s ✓ StructUtils 30.1 s ✓ Unitful 0.8 s ✓ Compat 1.2 s ✓ Preferences 11.9 s ✓ MutableArithmetics 1.0 s ✓ CommonSubexpressions 2.4 s ✓ SimpleTraits 1.5 s ✓ Statistics → SparseArraysExt 0.6 s ✓ Missings 0.7 s ✓ PooledArrays 0.5 s ✓ ConstructionBase → ConstructionBaseLinearAlgebraExt 0.6 s ✓ DiffResults 3.5 s ✓ DataStructures 0.6 s ✓ ScopedValues 3.8 s ✓ AbstractFBCModels 1.0 s ✓ LogExpFunctions 1.2 s ✓ PikaParser 0.7 s ✓ AliasTables 0.7 s ✓ CodecZlib 0.5 s ✓ TableTraits 7.7 s ✓ FileIO 0.8 s ✓ StructUtils → StructUtilsStaticArraysCoreExt 2.0 s ✓ Unitful → PrintfExt 1.6 s ✓ Unitful → ConstructionBaseUnitfulExt 1.5 s ✓ Unitful → NaNMathExt 0.5 s ✓ Compat → CompatLinearAlgebraExt 1.3 s ✓ JLLWrappers 1.1 s ✓ PrecompileTools 0.9 s ✓ SortingAlgorithms 2.6 s ✓ ConstraintTrees 1.9 s ✓ Tables 1.8 s ✓ OpenBLAS32_jll 1.3 s ✓ Bzip2_jll 1.3 s ✓ Libiconv_jll 1.1 s ✓ HiGHS_jll 1.2 s ✓ OpenSpecFun_jll 1.2 s ✓ GLPK_jll 13.6 s ✓ StaticArrays 6.2 s ✓ StringManipulation 10.7 s ✓ Parsers 46.3 s ✓ JLD2 4.9 s ✓ StatsBase 1.0 s ✓ StructUtils → StructUtilsTablesExt 0.9 s ✓ CodecBzip2 1.2 s ✓ XML2_jll 5.1 s ✓ SpecialFunctions 1.4 s ✓ StaticArrays → StaticArraysStatisticsExt 2.9 s ✓ ArnoldiMethod 1.9 s ✓ ConstructionBase → ConstructionBaseStaticArraysExt 42.5 s ✓ PrettyTables 9.4 s ✓ JSON 0.8 s ✓ InlineStrings → ParsersExt 2.8 s ✓ OnlineStatsBase 1.5 s ✓ SBML_jll 1.1 s ✓ DiffRules 10.3 s ✓ Graphs 81.3 s ✓ DataFrames 7.7 s ✓ JSONFBCModels 17.5 s ✓ SBML 7.1 s ✓ ForwardDiff 4.8 s ✓ SBMLFBCModels 1.8 s ✓ ForwardDiff → ForwardDiffStaticArraysExt 1.9 s ✓ Unitful → ForwardDiffExt 100.3 s ✓ MathOptInterface 10.1 s ✓ MathOptIIS 66.8 s ✓ JuMP 11.0 s ✓ GLPK julia: /source/src/gc-stock.c:830: jl_gc_small_alloc_inner: Assertion `__extension__ ({ __auto_type __atomic_load_ptr = (&ptls->gc_state); __typeof__ (*__atomic_load_ptr) __atomic_load_tmp; __atomic_load (__atomic_load_ptr, &__atomic_load_tmp, (memory_order_relaxed)); __atomic_load_tmp; }) == 0' failed. [678] signal 6 (-6): Aborted in expression starting at /home/pkgeval/.julia/packages/HiGHS/oND6G/src/HiGHS.jl:37 unknown function (ip: 0x76eefe703ebc) at /lib/x86_64-linux-gnu/libc.so.6 gsignal at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) abort at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x76eefe69f394) at /lib/x86_64-linux-gnu/libc.so.6 __assert_fail at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) jl_gc_small_alloc_inner at /source/src/gc-stock.c:830:5 jl_gc_small_alloc_noinline at /source/src/gc-stock.c:892:12 [inlined] jl_gc_alloc_ at /source/src/gc-stock.c:906:13 ijl_alloc_string at /source/src/array.c:295:22 _string_n at ./strings/string.jl:184:0 [inlined] _string at ./strings/substring.jl:271:0 (pc: 52) string at ./strings/substring.jl:252:0 [inlined] * at ./strings/basic.jl:261:0 (pc: 7) disable_sigint at ./c.jl:150:0 (pc: 1) optimize! at /home/pkgeval/.julia/packages/HiGHS/oND6G/src/MOI_wrapper.jl:2304:0 (pc: 250) optimize! at /home/pkgeval/.julia/packages/MathOptInterface/13jDB/src/Bridges/bridge_optimizer.jl:367:0 [inlined] optimize! at /home/pkgeval/.julia/packages/MathOptInterface/13jDB/src/MathOptInterface.jl:122:0 [inlined] optimize! at /home/pkgeval/.julia/packages/MathOptInterface/13jDB/src/Utilities/cachingoptimizer.jl:370:0 (pc: 118) unknown function (ip: 0x76ee8cd14da2) at (unknown file) _jl_invoke at /source/src/gf.c:4584:23 [inlined] ijl_apply_generic at /source/src/gf.c:4832:12 macro expansion at /home/pkgeval/.julia/packages/HiGHS/oND6G/src/HiGHS.jl:79:0 [inlined] macro expansion at /home/pkgeval/.julia/packages/PrecompileTools/QUxvR/src/workloads.jl:70:0 [inlined] macro expansion at /home/pkgeval/.julia/packages/HiGHS/oND6G/src/HiGHS.jl:38:0 [inlined] macro expansion at /home/pkgeval/.julia/packages/PrecompileTools/QUxvR/src/workloads.jl:118:0 [inlined] top-level scope at /home/pkgeval/.julia/packages/HiGHS/oND6G/src/HiGHS.jl:115:0 (pc: 303) jl_invoke_oneshot at /source/src/gf.c:4625:23 ijl_eval_thunk at /source/src/toplevel.c:764:18 jl_toplevel_eval_flex at /source/src/toplevel.c:716:26 jl_eval_toplevel_stmts at /source/src/toplevel.c:601:15 jl_eval_module_expr at /source/src/toplevel.c:266:5 [inlined] jl_toplevel_eval_flex at /source/src/toplevel.c:669:27 jl_eval_toplevel_stmts at /source/src/toplevel.c:601:15 jl_toplevel_eval_flex at /source/src/toplevel.c:688:27 ijl_toplevel_eval at /source/src/toplevel.c:786:12 ijl_toplevel_eval_in at /source/src/toplevel.c:831:13 eval at ./boot.jl:618:0 (pc: 1) include_string at ./loading.jl:3258:0 (pc: 140) _jl_invoke at /source/src/gf.c:4584:23 [inlined] ijl_apply_generic at /source/src/gf.c:4832:12 _include at ./loading.jl:3320:0 (pc: 123) include at ./Base.jl:334:0 (pc: 1) include_package_for_output at ./loading.jl:3431:0 (pc: 416) jfptr_include_package_for_output_1.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4584:23 [inlined] ijl_apply_generic at /source/src/gf.c:4832:12 jl_apply at /source/src/julia.h:2533:12 [inlined] do_call at /source/src/interpreter.c:123:26 eval_value at /source/src/interpreter.c:259:16 eval_stmt_value at /source/src/interpreter.c:194:23 [inlined] eval_body at /source/src/interpreter.c:829:21 jl_interpret_toplevel_thunk at /source/src/interpreter.c:1052:21 ijl_eval_thunk at /source/src/toplevel.c:772:18 jl_toplevel_eval_flex at /source/src/toplevel.c:716:26 jl_eval_toplevel_stmts at /source/src/toplevel.c:601:15 jl_toplevel_eval_flex at /source/src/toplevel.c:688:27 ijl_toplevel_eval at /source/src/toplevel.c:786:12 ijl_toplevel_eval_in at /source/src/toplevel.c:831:13 eval at ./boot.jl:618:0 (pc: 1) include_string at ./loading.jl:3258:0 (pc: 140) include_string at ./loading.jl:3268:0 [inlined] __script_entry_include_string at ./client.jl:104:0 [inlined] exec_options at ./client.jl:382:0 (pc: 900) _start at ./client.jl:695:0 (pc: 217) jfptr__start_0.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4584:23 [inlined] ijl_apply_generic at /source/src/gf.c:4832:12 jl_apply at /source/src/julia.h:2533:12 [inlined] true_main at /source/src/jlapi.c:989:29 jl_repl_entrypoint at /source/src/jlapi.c:1156:15 main at /source/cli/loader_exe.c:117:15 unknown function (ip: 0x76eefe6a0249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S Allocations: 13952928 (Pool: 13952366; Big: 562); GC: 9 ✗ HiGHS 16.6 s ✓ COBREXA 33.7 s ✓ COCOA 96 dependencies successfully precompiled in 681 seconds. 39 already precompiled. 1 dependency had output during precompilation: ┌ HiGHS │ julia: /source/src/gc-stock.c:830: jl_gc_small_alloc_inner: Assertion `__extension__ ({ __auto_type __atomic_load_ptr = (&ptls->gc_state); __typeof__ (*__atomic_load_ptr) __atomic_load_tmp; __atomic_load (__atomic_load_ptr, &__atomic_load_tmp, (memory_order_relaxed)); __atomic_load_tmp; }) == 0' failed. │ │ [678] signal 6 (-6): Aborted │ in expression starting at /home/pkgeval/.julia/packages/HiGHS/oND6G/src/HiGHS.jl:37 │ unknown function (ip: 0x76eefe703ebc) at /lib/x86_64-linux-gnu/libc.so.6 │ gsignal at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) │ abort at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) │ unknown function (ip: 0x76eefe69f394) at /lib/x86_64-linux-gnu/libc.so.6 │ __assert_fail at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) │ jl_gc_small_alloc_inner at /source/src/gc-stock.c:830:5 │ jl_gc_small_alloc_noinline at /source/src/gc-stock.c:892:12 [inlined] │ jl_gc_alloc_ at /source/src/gc-stock.c:906:13 │ ijl_alloc_string at /source/src/array.c:295:22 │ _string_n at ./strings/string.jl:184:0 [inlined] │ _string at ./strings/substring.jl:271:0 (pc: 52) │ string at ./strings/substring.jl:252:0 [inlined] │ * at ./strings/basic.jl:261:0 (pc: 7) │ disable_sigint at ./c.jl:150:0 (pc: 1) │ optimize! at /home/pkgeval/.julia/packages/HiGHS/oND6G/src/MOI_wrapper.jl:2304:0 (pc: 250) │ optimize! at /home/pkgeval/.julia/packages/MathOptInterface/13jDB/src/Bridges/bridge_optimizer.jl:367:0 [inlined] │ optimize! at /home/pkgeval/.julia/packages/MathOptInterface/13jDB/src/MathOptInterface.jl:122:0 [inlined] │ optimize! at /home/pkgeval/.julia/packages/MathOptInterface/13jDB/src/Utilities/cachingoptimizer.jl:370:0 (pc: 118) │ unknown function (ip: 0x76ee8cd14da2) at (unknown file) │ _jl_invoke at /source/src/gf.c:4584:23 [inlined] │ ijl_apply_generic at /source/src/gf.c:4832:12 │ macro expansion at /home/pkgeval/.julia/packages/HiGHS/oND6G/src/HiGHS.jl:79:0 [inlined] │ macro expansion at /home/pkgeval/.julia/packages/PrecompileTools/QUxvR/src/workloads.jl:70:0 [inlined] │ macro expansion at /home/pkgeval/.julia/packages/HiGHS/oND6G/src/HiGHS.jl:38:0 [inlined] │ macro expansion at /home/pkgeval/.julia/packages/PrecompileTools/QUxvR/src/workloads.jl:118:0 [inlined] │ top-level scope at /home/pkgeval/.julia/packages/HiGHS/oND6G/src/HiGHS.jl:115:0 (pc: 303) │ jl_invoke_oneshot at /source/src/gf.c:4625:23 │ ijl_eval_thunk at /source/src/toplevel.c:764:18 │ jl_toplevel_eval_flex at /source/src/toplevel.c:716:26 │ jl_eval_toplevel_stmts at /source/src/toplevel.c:601:15 │ jl_eval_module_expr at /source/src/toplevel.c:266:5 [inlined] │ jl_toplevel_eval_flex at /source/src/toplevel.c:669:27 │ jl_eval_toplevel_stmts at /source/src/toplevel.c:601:15 │ jl_toplevel_eval_flex at /source/src/toplevel.c:688:27 │ ijl_toplevel_eval at /source/src/toplevel.c:786:12 │ ijl_toplevel_eval_in at /source/src/toplevel.c:831:13 │ eval at ./boot.jl:618:0 (pc: 1) │ include_string at ./loading.jl:3258:0 (pc: 140) │ _jl_invoke at /source/src/gf.c:4584:23 [inlined] │ ijl_apply_generic at /source/src/gf.c:4832:12 │ _include at ./loading.jl:3320:0 (pc: 123) │ include at ./Base.jl:334:0 (pc: 1) │ include_package_for_output at ./loading.jl:3431:0 (pc: 416) │ jfptr_include_package_for_output_1.1 at /opt/julia/lib/julia/sys.so (unknown line) │ _jl_invoke at /source/src/gf.c:4584:23 [inlined] │ ijl_apply_generic at /source/src/gf.c:4832:12 │ jl_apply at /source/src/julia.h:2533:12 [inlined] │ do_call at /source/src/interpreter.c:123:26 │ eval_value at /source/src/interpreter.c:259:16 │ eval_stmt_value at /source/src/interpreter.c:194:23 [inlined] │ eval_body at /source/src/interpreter.c:829:21 │ jl_interpret_toplevel_thunk at /source/src/interpreter.c:1052:21 │ ijl_eval_thunk at /source/src/toplevel.c:772:18 │ jl_toplevel_eval_flex at /source/src/toplevel.c:716:26 │ jl_eval_toplevel_stmts at /source/src/toplevel.c:601:15 │ jl_toplevel_eval_flex at /source/src/toplevel.c:688:27 │ ijl_toplevel_eval at /source/src/toplevel.c:786:12 │ ijl_toplevel_eval_in at /source/src/toplevel.c:831:13 │ eval at ./boot.jl:618:0 (pc: 1) │ include_string at ./loading.jl:3258:0 (pc: 140) │ include_string at ./loading.jl:3268:0 [inlined] │ __script_entry_include_string at ./client.jl:104:0 [inlined] │ exec_options at ./client.jl:382:0 (pc: 900) │ _start at ./client.jl:695:0 (pc: 217) │ jfptr__start_0.1 at /opt/julia/lib/julia/sys.so (unknown line) │ _jl_invoke at /source/src/gf.c:4584:23 [inlined] │ ijl_apply_generic at /source/src/gf.c:4832:12 │ jl_apply at /source/src/julia.h:2533:12 [inlined] │ true_main at /source/src/jlapi.c:989:29 │ jl_repl_entrypoint at /source/src/jlapi.c:1156:15 │ main at /source/cli/loader_exe.c:117:15 │ unknown function (ip: 0x76eefe6a0249) at /lib/x86_64-linux-gnu/libc.so.6 │ __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) │ unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S │ Allocations: 13952928 (Pool: 13952366; Big: 562); GC: 9 └ ERROR: LoadError: The following 1 package failed to precompile: HiGHS Failed to precompile HiGHS [87dc4568-4c63-4d18-b0c0-bb2238e4078b] to "/home/pkgeval/.julia/compiled/v1.14/HiGHS/jl_o4Kggk" (ProcessSignaled(6)). in expression starting at /PkgEval.jl/scripts/precompile.jl:34 Precompilation failed after 703.79s ################################################################################ # Testing # Testing COCOA Status `/tmp/jl_WVZtiv/Project.toml` [5a4f3dfa] AbstractFBCModels v1.3.0 [babc4406] COBREXA v2.9.1 [9ecc82ce] COCOA v1.0.0 [5515826b] ConstraintTrees v1.11.1 [a93c6f00] DataFrames v1.8.2 [60bf3e95] GLPK v1.2.1 [87dc4568] HiGHS v1.25.0 [475c1105] JSONFBCModels v1.1.0 [3e8f9d1a] SBMLFBCModels v1.1.1 [8ba89e20] Distributed v1.12.0 [2f01184e] SparseArrays v1.13.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_WVZtiv/Manifest.toml` [5a4f3dfa] AbstractFBCModels v1.3.0 [1520ce14] AbstractTrees v0.4.5 [66dad0bd] AliasTables v1.1.3 [ec485272] ArnoldiMethod v0.4.0 [babc4406] COBREXA v2.9.1 [9ecc82ce] COCOA v1.0.0 [523fee87] CodecBzip2 v0.8.5 [944b1d66] CodecZlib v0.7.9 [861a8166] Combinatorics v1.1.0 [bbf7d656] CommonSubexpressions v0.3.1 [34da2185] Compat v4.18.1 [5515826b] ConstraintTrees v1.11.1 [187b0558] ConstructionBase v1.6.0 [a8cc5b0e] Crayons v4.2.0 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.8.2 [864edb3b] DataStructures v0.19.6 [e2d170a0] DataValueInterfaces v1.0.0 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.16.0 [ffbed154] DocStringExtensions v0.9.5 [5789e2e9] FileIO v1.20.0 [f6369f11] ForwardDiff v1.4.5 [60bf3e95] GLPK v1.2.1 [86223c79] Graphs v1.14.0 [076d061b] HashArrayMappedTries v0.2.0 [87dc4568] HiGHS v1.25.0 [615f187c] IfElse v0.1.1 [d25df0c9] Inflate v0.1.5 [842dd82b] InlineStrings v1.4.5 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.6 [82899510] IteratorInterfaceExtensions v1.0.0 ⌅ [033835bb] JLD2 v0.5.15 [692b3bcd] JLLWrappers v1.8.0 [682c06a0] JSON v1.7.1 [475c1105] JSONFBCModels v1.1.0 [4076af6c] JuMP v1.31.2 [b964fa9f] LaTeXStrings v1.4.1 [2ab3a3ac] LogExpFunctions v1.0.1 [1914dd2f] MacroTools v0.5.16 [8c4f8055] MathOptIIS v0.2.0 [b8f27783] MathOptInterface v1.53.0 [e1d29d7a] Missings v1.2.0 [d8a4904e] MutableArithmetics v1.8.0 [77ba4419] NaNMath v1.1.4 [925886fa] OnlineStatsBase v1.7.3 ⌅ [bac558e1] OrderedCollections v1.8.2 ⌅ [69de0a69] Parsers v2.8.7 [3bbf5609] PikaParser v0.6.1 [2dfb63ee] PooledArrays v1.4.3 [aea7be01] PrecompileTools v1.3.4 [21216c6a] Preferences v1.5.2 [08abe8d2] PrettyTables v3.4.8 [43287f4e] PtrArrays v1.4.0 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [e5567a89] SBML v1.6.0 [3e8f9d1a] SBMLFBCModels v1.1.1 [7e506255] ScopedValues v1.6.2 [91c51154] SentinelArrays v1.4.10 [699a6c99] SimpleTraits v0.9.6 [a2af1166] SortingAlgorithms v1.2.3 [276daf66] SpecialFunctions v2.9.0 [860ef19b] StableRNGs v1.0.4 [90137ffa] StaticArrays v1.9.19 [1e83bf80] StaticArraysCore v1.4.4 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.8.0 [2913bbd2] StatsBase v0.34.13 [892a3eda] StringManipulation v0.5.0 [ec057cc2] StructUtils v2.8.5 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.14.0 [3bb67fe8] TranscodingStreams v0.11.3 [1986cc42] Unitful v1.28.0 [6e34b625] Bzip2_jll v1.0.9+0 ⌅ [e8aa6df9] GLPK_jll v5.0.1+1 [8fd58aa0] HiGHS_jll v1.15.1+1 [94ce4f54] Libiconv_jll v1.18.0+0 [656ef2d0] OpenBLAS32_jll v0.3.34+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [bb12108a] SBML_jll v5.21.0+0 ⌅ [02c8fc9c] XML2_jll v2.13.9+0 [0dad84c5] ArgTools v1.2.0 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.12.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0 [b27032c2] LibCURL v1.0.0 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.14.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.14.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.13.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.13.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.5.7+0 [781609d7] GMP_jll v6.3.0+4 [deac9b47] LibCURL_jll v8.21.0+0 [e37daf67] LibGit2_jll v1.9.7+0 [29816b5a] LibSSH2_jll v1.11.104+0 [14a3606d] MozillaCACerts_jll v2026.8.13 [4536629a] OpenBLAS_jll v0.3.34+0 [05823500] OpenLibm_jll v0.8.7+0 [458c3c95] OpenSSL_jll v3.5.8+0 [efcefdf7] PCRE2_jll v10.47.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.2+0 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.70.0+0 [3f19e933] p7zip_jll v17.8.2+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... julia: /source/src/gc-stock.c:830: jl_gc_small_alloc_inner: Assertion `__extension__ ({ __auto_type __atomic_load_ptr = (&ptls->gc_state); __typeof__ (*__atomic_load_ptr) __atomic_load_tmp; __atomic_load (__atomic_load_ptr, &__atomic_load_tmp, (memory_order_relaxed)); __atomic_load_tmp; }) == 0' failed. [696] signal 6 (-6): Aborted in expression starting at /home/pkgeval/.julia/packages/HiGHS/oND6G/src/HiGHS.jl:37 unknown function (ip: 0x7cecfda43ebc) at /lib/x86_64-linux-gnu/libc.so.6 gsignal at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) abort at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x7cecfd9df394) at /lib/x86_64-linux-gnu/libc.so.6 __assert_fail at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) jl_gc_small_alloc_inner at /source/src/gc-stock.c:830:5 jl_gc_small_alloc_noinline at /source/src/gc-stock.c:892:12 [inlined] jl_gc_alloc_ at /source/src/gc-stock.c:906:13 ijl_alloc_string at /source/src/array.c:295:22 _string_n at ./strings/string.jl:184:0 [inlined] _string at ./strings/substring.jl:271:0 (pc: 52) string at ./strings/substring.jl:252:0 [inlined] * at ./strings/basic.jl:261:0 (pc: 7) disable_sigint at ./c.jl:150:0 (pc: 1) optimize! at /home/pkgeval/.julia/packages/HiGHS/oND6G/src/MOI_wrapper.jl:2304:0 (pc: 250) optimize! at /home/pkgeval/.julia/packages/MathOptInterface/13jDB/src/Bridges/bridge_optimizer.jl:367:0 [inlined] optimize! at /home/pkgeval/.julia/packages/MathOptInterface/13jDB/src/MathOptInterface.jl:122:0 [inlined] optimize! at /home/pkgeval/.julia/packages/MathOptInterface/13jDB/src/Utilities/cachingoptimizer.jl:370:0 (pc: 118) unknown function (ip: 0x7cec8cd3dda2) at (unknown file) _jl_invoke at /source/src/gf.c:4584:23 [inlined] ijl_apply_generic at /source/src/gf.c:4832:12 macro expansion at /home/pkgeval/.julia/packages/HiGHS/oND6G/src/HiGHS.jl:79:0 [inlined] macro expansion at /home/pkgeval/.julia/packages/PrecompileTools/QUxvR/src/workloads.jl:70:0 [inlined] macro expansion at /home/pkgeval/.julia/packages/HiGHS/oND6G/src/HiGHS.jl:38:0 [inlined] macro expansion at /home/pkgeval/.julia/packages/PrecompileTools/QUxvR/src/workloads.jl:118:0 [inlined] top-level scope at /home/pkgeval/.julia/packages/HiGHS/oND6G/src/HiGHS.jl:115:0 (pc: 303) jl_invoke_oneshot at /source/src/gf.c:4625:23 ijl_eval_thunk at /source/src/toplevel.c:764:18 jl_toplevel_eval_flex at /source/src/toplevel.c:716:26 jl_eval_toplevel_stmts at /source/src/toplevel.c:601:15 jl_eval_module_expr at /source/src/toplevel.c:266:5 [inlined] jl_toplevel_eval_flex at /source/src/toplevel.c:669:27 jl_eval_toplevel_stmts at /source/src/toplevel.c:601:15 jl_toplevel_eval_flex at /source/src/toplevel.c:688:27 ijl_toplevel_eval at /source/src/toplevel.c:786:12 ijl_toplevel_eval_in at /source/src/toplevel.c:831:13 eval at ./boot.jl:618:0 (pc: 1) include_string at ./loading.jl:3258:0 (pc: 140) _jl_invoke at /source/src/gf.c:4584:23 [inlined] ijl_apply_generic at /source/src/gf.c:4832:12 _include at ./loading.jl:3320:0 (pc: 123) include at ./Base.jl:334:0 (pc: 1) include_package_for_output at ./loading.jl:3431:0 (pc: 416) jfptr_include_package_for_output_1.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4584:23 [inlined] ijl_apply_generic at /source/src/gf.c:4832:12 jl_apply at /source/src/julia.h:2533:12 [inlined] do_call at /source/src/interpreter.c:123:26 eval_value at /source/src/interpreter.c:259:16 eval_stmt_value at /source/src/interpreter.c:194:23 [inlined] eval_body at /source/src/interpreter.c:829:21 jl_interpret_toplevel_thunk at /source/src/interpreter.c:1052:21 ijl_eval_thunk at /source/src/toplevel.c:772:18 jl_toplevel_eval_flex at /source/src/toplevel.c:716:26 jl_eval_toplevel_stmts at /source/src/toplevel.c:601:15 jl_toplevel_eval_flex at /source/src/toplevel.c:688:27 ijl_toplevel_eval at /source/src/toplevel.c:786:12 ijl_toplevel_eval_in at /source/src/toplevel.c:831:13 eval at ./boot.jl:618:0 (pc: 1) include_string at ./loading.jl:3258:0 (pc: 140) include_string at ./loading.jl:3268:0 [inlined] __script_entry_include_string at ./client.jl:104:0 [inlined] exec_options at ./client.jl:382:0 (pc: 900) _start at ./client.jl:695:0 (pc: 217) jfptr__start_0.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4584:23 [inlined] ijl_apply_generic at /source/src/gf.c:4832:12 jl_apply at /source/src/julia.h:2533:12 [inlined] true_main at /source/src/jlapi.c:989:29 jl_repl_entrypoint at /source/src/jlapi.c:1156:15 main at /source/cli/loader_exe.c:117:15 unknown function (ip: 0x7cecfd9e0249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S Allocations: 14518310 (Pool: 14517744; Big: 566); GC: 9 1 dependency had output during precompilation: ┌ HiGHS │ [Output was shown above] └ ERROR: LoadError: The following 1 package failed to precompile: HiGHS Failed to precompile HiGHS [87dc4568-4c63-4d18-b0c0-bb2238e4078b] to "/home/pkgeval/.julia/compiled/v1.14/HiGHS/jl_AbhWbP" (ProcessSignaled(6)). in expression starting at /home/pkgeval/.julia/packages/COCOA/nu6iP/test/runtests.jl:4 Testing failed after 70.25s ERROR: LoadError: Package COCOA errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3283 [3] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:587 [4] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172 [5] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [6] test(pkg::String; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [inlined] [7] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:223 in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 PkgEval failed after 856.06s: package fails to precompile