Package evaluation to test PencilArrays on Julia 1.14.0-DEV.2802 (918269a29b*) started at 2026-07-29T09:25:24.490 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 15.44s ################################################################################ # Installation # Installing PencilArrays... Resolving package versions... Updating `~/.julia/environments/v1.14/Project.toml` [0e08944d] + PencilArrays v0.19.12 Updating `~/.julia/environments/v1.14/Manifest.toml` [79e6a3ab] + Adapt v4.7.0 [4fba245c] + ArrayInterface v7.28.1 [a9b6321e] + Atomix v1.1.3 [f70d9fcc] + CommonWorldInvalidations v1.1.1 [34da2185] + Compat v4.18.1 [a8cc5b0e] + Crayons v4.2.0 [9a962f9c] + DataAPI v1.16.0 [e2d170a0] + DataValueInterfaces v1.0.0 [ffbed154] + DocStringExtensions v0.9.5 [e2ba6199] + ExprTools v0.1.11 [615f187c] + IfElse v0.1.1 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.8.0 [0f8b85d8] + JSON3 v1.14.3 [63c18a36] + KernelAbstractions v0.9.42 [b964fa9f] + LaTeXStrings v1.4.0 [da04e1cc] + MPI v0.20.26 [3da0fdf6] + MPIPreferences v0.1.12 [1914dd2f] + MacroTools v0.5.16 [6fe1bfb0] + OffsetArrays v1.17.0 [bac558e1] + OrderedCollections v2.0.1 [69de0a69] + Parsers v2.8.6 [0e08944d] + PencilArrays v0.19.12 [eebad327] + PkgVersion v0.3.3 [aea7be01] + PrecompileTools v1.3.4 [21216c6a] + Preferences v1.5.2 [08abe8d2] + PrettyTables v3.4.2 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [431bcebd] + SciMLPublic v1.2.4 [aedffcd0] + Static v1.4.4 [0d7ed370] + StaticArrayInterface v1.10.0 [90137ffa] + StaticArrays v1.9.18 [1e83bf80] + StaticArraysCore v1.4.4 [15972242] + StaticPermutations v0.3.0 [5e0ebb24] + Strided v2.6.4 [4db3bf67] + StridedViews v0.5.2 [892a3eda] + StringManipulation v0.4.6 [856f2bd8] + StructTypes v1.11.0 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.13.0 [a759f4b9] + TimerOutputs v1.1.0 [9d95972d] + TupleTools v1.6.0 [013be700] + UnsafeAtomics v0.3.1 [81def892] + VersionParsing v1.3.0 [e33a78d0] + Hwloc_jll v2.14.0+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [b5ada748] + MPIABI_jll v0.1.5+0 [7cb0a576] + MPICH_jll v5.0.1+0 [f1f71cc9] + MPItrampoline_jll v5.5.6+0 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 [fe0851c0] + OpenMPI_jll v5.0.11+0 ⌅ [02c8fc9c] + XML2_jll v2.13.9+0 [a65dc6b1] + Xorg_libpciaccess_jll v0.19.0+0 [0dad84c5] + ArgTools v1.2.0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v1.0.0 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.14.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.14.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.13.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [f489334b] + StyledStrings v1.13.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.5.7+0 [deac9b47] + LibCURL_jll v8.21.0+0 [e37daf67] + LibGit2_jll v1.9.6+0 [29816b5a] + LibSSH2_jll v1.11.103+0 [14a3606d] + MozillaCACerts_jll v2026.7.16 [4536629a] + OpenBLAS_jll v0.3.34+0 [458c3c95] + OpenSSL_jll v3.5.7+0 [efcefdf7] + PCRE2_jll v10.47.0+0 [83775a58] + Zlib_jll v1.3.2+0 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.69.0+0 [3f19e933] + p7zip_jll v17.8.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 9.77s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompiling project... 2.1 s ✓ RecursiveArrayTools → RecursiveArrayToolsTablesExt 1.7 s ✓ RecursiveArrayTools → RecursiveArrayToolsStructArraysExt ┌ Warning: the bare singleton variant syntax `ContinuousClock` is deprecated, write `ContinuousClock()` instead (near /home/pkgeval/.julia/packages/SciMLBase/3RWdf/src/clock.jl:4) │ caller = ip:0x0 └ @ Core :-1 39.3 s ✓ SciMLBase 13.8 s ✓ PencilArrays WARNING: Imported binding SciMLBase.NoiseSizeIncompatabilityError was undeclared at import time during import to DiffEqBase. WARNING: Imported binding SciMLBase.DIRECT_AUTODIFF_INCOMPATABILITY_MESSAGE was undeclared at import time during import to DiffEqBase. 7.5 s ✓ DiffEqBase 12.1 s ✓ PencilArrays → PencilArraysHDF5Ext 5.1 s ✓ DiffEqBase → DiffEqBaseSparseArraysExt 7.0 s ✓ DiffEqBase → DiffEqBaseMPIExt 11.9 s ✓ OrdinaryDiffEqCore 13.9 s ✓ PencilArrays → PencilArraysDiffEqExt 6.8 s ✓ OrdinaryDiffEqCore → OrdinaryDiffEqCoreSparseArraysExt 15.3 s ✓ OrdinaryDiffEqTsit5 12 dependencies successfully precompiled in 139 seconds. 212 already precompiled. 2 dependencies had output during precompilation: ┌ DiffEqBase │ WARNING: Imported binding SciMLBase.NoiseSizeIncompatabilityError was undeclared at import time during import to DiffEqBase. │ WARNING: Imported binding SciMLBase.DIRECT_AUTODIFF_INCOMPATABILITY_MESSAGE was undeclared at import time during import to DiffEqBase. └ ┌ SciMLBase │ ┌ Warning: the bare singleton variant syntax `ContinuousClock` is deprecated, write `ContinuousClock()` instead (near /home/pkgeval/.julia/packages/SciMLBase/3RWdf/src/clock.jl:4) │ │ caller = ip:0x0 │ └ @ Core :-1 └ Precompilation completed after 173.56s ################################################################################ # Testing # Testing PencilArrays Status `/tmp/jl_qCJ8LV/Project.toml` [79e6a3ab] Adapt v4.7.0 [6e4b80f9] BenchmarkTools v1.8.0 [34da2185] Compat v4.18.1 ⌅ [2b5f629d] DiffEqBase v6.194.0 [0c68f7d7] GPUArrays v11.5.8 [f67ccb44] HDF5 v0.17.3 [27aeb0d3] JLArrays v0.3.1 [0f8b85d8] JSON3 v1.14.3 [da04e1cc] MPI v0.20.26 [3da0fdf6] MPIPreferences v0.1.12 [6fe1bfb0] OffsetArrays v1.17.0 ⌃ [b1df2697] OrdinaryDiffEqTsit5 v1.10.0 [0e08944d] PencilArrays v0.19.12 ⌅ [731186ca] RecursiveArrayTools v3.50.0 ⌅ [0bca4576] SciMLBase v2.146.0 [0d7ed370] StaticArrayInterface v1.10.0 [90137ffa] StaticArrays v1.9.18 [09ab397b] StructArrays v0.7.3 [b77e0a4c] InteractiveUtils v1.11.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_qCJ8LV/Manifest.toml` [47edcb42] ADTypes v1.22.3 [7d9f7c33] Accessors v0.1.45 [79e6a3ab] Adapt v4.7.0 [4fba245c] ArrayInterface v7.28.1 [a9b6321e] Atomix v1.1.3 [6e4b80f9] BenchmarkTools v1.8.0 [62783981] BitTwiddlingConvenienceFunctions v0.1.6 [fa961155] CEnum v0.5.0 [2a0fbf3d] CPUSummary v0.2.7 [fb6a15b2] CloseOpenIntervals v0.1.13 [38540f10] CommonSolve v0.2.12 [f70d9fcc] CommonWorldInvalidations v1.1.1 [34da2185] Compat v4.18.1 [a33af91c] CompositionsBase v0.1.2 [2569d6c7] ConcreteStructs v0.2.6 [187b0558] ConstructionBase v1.6.0 [adafc99b] CpuId v0.3.1 [a8cc5b0e] Crayons v4.2.0 [9a962f9c] DataAPI v1.16.0 [864edb3b] DataStructures v0.19.6 [e2d170a0] DataValueInterfaces v1.0.0 ⌅ [2b5f629d] DiffEqBase v6.194.0 [ffbed154] DocStringExtensions v0.9.5 [4e289a0a] EnumX v1.0.7 [f151be2c] EnzymeCore v0.8.21 [e2ba6199] ExprTools v0.1.11 [55351af7] ExproniconLite v0.10.14 ⌅ [7034ab61] FastBroadcast v0.3.5 [9aa1b823] FastClosures v0.3.2 [a4df4552] FastPower v1.4.0 [1a297f60] FillArrays v1.17.0 [069b7b12] FunctionWrappers v1.1.3 ⌅ [77dc65aa] FunctionWrappersWrappers v0.1.3 [0c68f7d7] GPUArrays v11.5.8 [46192b85] GPUArraysCore v0.2.0 [f67ccb44] HDF5 v0.17.3 [076d061b] HashArrayMappedTries v0.2.0 [615f187c] IfElse v0.1.1 [3587e190] InverseFunctions v0.1.17 [82899510] IteratorInterfaceExtensions v1.0.0 [27aeb0d3] JLArrays v0.3.1 [692b3bcd] JLLWrappers v1.8.0 [682c06a0] JSON v1.6.1 [0f8b85d8] JSON3 v1.14.3 [ae98c720] Jieko v0.2.1 [63c18a36] KernelAbstractions v0.9.42 [929cbde3] LLVM v9.11.0 [b964fa9f] LaTeXStrings v1.4.0 [10f19ff3] LayoutPointers v0.1.17 [e6f89c97] LoggingExtras v1.2.0 [da04e1cc] MPI v0.20.26 [3da0fdf6] MPIPreferences v0.1.12 [1914dd2f] MacroTools v0.5.16 [d125e4d3] ManualMemory v0.1.8 [2e0e35c7] Moshi v0.3.12 [46d2c3a1] MuladdMacro v0.2.6 [6fe1bfb0] OffsetArrays v1.17.0 [bac558e1] OrderedCollections v2.0.1 ⌅ [bbf590c4] OrdinaryDiffEqCore v3.8.0 ⌃ [b1df2697] OrdinaryDiffEqTsit5 v1.10.0 [69de0a69] Parsers v2.8.6 [0e08944d] PencilArrays v0.19.12 [eebad327] PkgVersion v0.3.3 [f517fe37] Polyester v0.7.19 [1d0040c9] PolyesterWeave v0.2.2 [d236fae5] PreallocationTools v1.4.0 [aea7be01] PrecompileTools v1.3.4 [21216c6a] Preferences v1.5.2 [08abe8d2] PrettyTables v3.4.2 [3cdcf5f2] RecipesBase v1.3.4 ⌅ [731186ca] RecursiveArrayTools v3.50.0 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [7e49a35a] RuntimeGeneratedFunctions v0.5.22 [94e857df] SIMDTypes v0.1.0 ⌅ [0bca4576] SciMLBase v2.146.0 ⌅ [a6db7da4] SciMLLogging v1.10.1 [c0aeaf25] SciMLOperators v1.25.0 [431bcebd] SciMLPublic v1.2.4 [53ae85a6] SciMLStructures v1.10.4 [7e506255] ScopedValues v1.6.2 [efcf1570] Setfield v1.1.2 [aedffcd0] Static v1.4.4 [0d7ed370] StaticArrayInterface v1.10.0 [90137ffa] StaticArrays v1.9.18 [1e83bf80] StaticArraysCore v1.4.4 [15972242] StaticPermutations v0.3.0 [10745b16] Statistics v1.11.1 [7792a7ef] StrideArraysCore v0.5.9 [5e0ebb24] Strided v2.6.4 [4db3bf67] StridedViews v0.5.2 [892a3eda] StringManipulation v0.4.6 [09ab397b] StructArrays v0.7.3 [856f2bd8] StructTypes v1.11.0 [ec057cc2] StructUtils v2.8.2 [2efcf032] SymbolicIndexingInterface v0.3.51 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.13.0 [8290d209] ThreadingUtilities v0.5.6 [a759f4b9] TimerOutputs v1.1.0 [781d530d] TruncatedStacktraces v1.4.0 [9d95972d] TupleTools v1.6.0 [013be700] UnsafeAtomics v0.3.1 [81def892] VersionParsing v1.3.0 [0234f1f7] HDF5_jll v2.1.2+0 [e33a78d0] Hwloc_jll v2.14.0+0 [dad2f222] LLVMExtra_jll v0.0.44+0 [94ce4f54] Libiconv_jll v1.18.0+0 [b5ada748] MPIABI_jll v0.1.5+0 [7cb0a576] MPICH_jll v5.0.1+0 [f1f71cc9] MPItrampoline_jll v5.5.6+0 [9237b28f] MicrosoftMPI_jll v10.1.4+3 [fe0851c0] OpenMPI_jll v5.0.11+0 ⌅ [02c8fc9c] XML2_jll v2.13.9+0 [a65dc6b1] Xorg_libpciaccess_jll v0.19.0+0 ⌅ [2b3700d1] aws_c_auth_jll v0.9.6+0 [70f11efc] aws_c_cal_jll v0.9.13+0 [73048d1d] aws_c_common_jll v0.12.6+0 [73a04cd5] aws_c_compression_jll v0.3.2+0 [3254fc65] aws_c_http_jll v0.10.13+0 [13c41daa] aws_c_io_jll v0.26.3+0 ⌅ [bd1f34fb] aws_c_s3_jll v0.11.5+0 [1282aa60] aws_c_sdkutils_jll v0.2.4+1 [b2a88e68] aws_checksums_jll v0.2.10+0 [c4b69c83] dlfcn_win32_jll v1.4.2+0 [477f73a3] libaec_jll v1.1.7+0 [9aeb927a] mpif_jll v0.1.7+0 [cddc5d3d] s2n_tls_jll v1.7.3+0 [0dad84c5] ArgTools v1.2.0 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v1.0.0 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.14.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.14.0 [de0858da] Printf v1.11.0 [9abbd945] Profile v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.13.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.13.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.5.7+0 [deac9b47] LibCURL_jll v8.21.0+0 [e37daf67] LibGit2_jll v1.9.6+0 [29816b5a] LibSSH2_jll v1.11.103+0 [14a3606d] MozillaCACerts_jll v2026.7.16 [4536629a] OpenBLAS_jll v0.3.34+0 [458c3c95] OpenSSL_jll v3.5.7+0 [efcefdf7] PCRE2_jll v10.47.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.2+0 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.69.0+0 [3f19e933] p7zip_jll v17.8.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... MPIPreferences.binary = "MPICH_jll" Julia Version 1.14.0-DEV.2802 Build Info: Commit 918269a29b* (2026-07-28 03:49 UTC) GC: Built with stock GC Platform Info: OS: Linux (x86_64-unknown-linux-gnu) CPU: 128 × AMD EPYC 7502 32-Core Processor (znver2) WORD_SIZE: 64 LLVM: libLLVM-21.1.8 (ORCJIT, znver2) Threads: 1 default, 0 interactive, 1 GC (on 1 virtual cores) Environment: JULIA_CPU_THREADS = 1 JULIA_NUM_PRECOMPILE_TASKS = 1 JULIA_PKG_PRECOMPILE_AUTO = 0 JULIA_PKGEVAL = true JULIA_DEPOT_PATH = /home/pkgeval/.julia:/usr/local/share/julia: JULIA_NUM_THREADS = 1 JULIA_LOAD_PATH = @:/tmp/jl_qCJ8LV MPIPreferences: binary: MPICH_jll abi: MPICH Package versions MPI.jl: 0.20.26 MPIPreferences.jl: 0.1.12 MPICH_jll: 5.0.1+0 Library information: libmpi: /home/pkgeval/.julia/artifacts/8bd6881e43b97a8d20af0db9dbda166281c02323/lib/libmpi.so libmpi dlpath: /home/pkgeval/.julia/artifacts/8bd6881e43b97a8d20af0db9dbda166281c02323/lib/libmpi.so MPI version: 5.0.0 Library version: MPICH Version: 5.0.1 MPICH Release date: Fri Apr 10 09:45:31 AM CDT 2026 MPICH ABI: 18:1:6 MPICH Device: ch4:ofi MPICH configure: --build=x86_64-linux-musl --disable-dependency-tracking --disable-doc --enable-fast=ndebug,O3 --enable-static=no --host=x86_64-linux-gnu --prefix=/workspace/destdir --with-hwloc=/workspace/destdir MPICH CC: cc -DNDEBUG -DNVALGRIND -O3 MPICH CXX: c++ -DNDEBUG -DNVALGRIND -O3 MPICH F77: gfortran -O3 MPICH FC: gfortran -O3 MPICH features: threadcomm MPI launcher: /home/pkgeval/.julia/artifacts/8bd6881e43b97a8d20af0db9dbda166281c02323/bin/mpiexec MPI launcher path: /home/pkgeval/.julia/artifacts/8bd6881e43b97a8d20af0db9dbda166281c02323/bin/mpiexec ERROR: LoadError: tests should be run with system MPI binaries for testing parallel HDF5 (found MPIPreferences.binary = MPICH_jll) Stacktrace: [1] error(s::String) @ Base error.jl:56 [2] top-level scope @ ~/.julia/packages/PencilArrays/QJtEC/test/runtests.jl:38 [3] include(mapexpr::Function, mod::Module, _path::String) @ Base Base.jl:330 [4] top-level scope @ none:6 in expression starting at /home/pkgeval/.julia/packages/PencilArrays/QJtEC/test/runtests.jl:37 Testing failed after 48.93s ERROR: LoadError: Package PencilArrays errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3247 [3] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:587 [4] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172 [5] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [6] test(pkg::String; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [inlined] [7] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:223 in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 PkgEval failed after 282.65s: package tests unexpectedly errored