Package evaluation to test MendelImpute on Julia 1.14.0-DEV.2802 (918269a29b*) started at 2026-07-29T19:08:29.125 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 16.02s ################################################################################ # Installation # Installing MendelImpute... Resolving package versions... Installed CommonWorldInvalidations ───────── v1.1.1 Installed Glob ───────────────────────────── v1.5.0 Installed Qt6Base_jll ────────────────────── v6.10.2+2 Installed libass_jll ─────────────────────── v0.17.4+0 Installed libaom_jll ─────────────────────── v3.13.3+0 Installed Libuuid_jll ────────────────────── v2.42.0+0 Installed HarfBuzz_jll ───────────────────── v8.5.1+0 Installed MultivariateStats ──────────────── v0.10.4 Installed Bzip2_jll ──────────────────────── v1.0.9+0 Installed Libtiff_jll ────────────────────── v4.7.3+0 Installed OrderedCollections ─────────────── v1.8.2 Installed NearestNeighbors ───────────────── v0.4.29 Installed Graphite2_jll ──────────────────── v1.3.16+0 Installed HypothesisTests ────────────────── v0.11.8 Installed Cairo_jll ──────────────────────── v1.18.7+0 Installed Xorg_libXinerama_jll ───────────── v1.1.7+0 Installed InlineStrings ──────────────────── v1.4.5 Installed PlotThemes ─────────────────────── v3.3.0 Installed SIMDTypes ──────────────────────── v0.1.0 Installed SentinelArrays ─────────────────── v1.4.10 Installed FileIO ─────────────────────────── v1.20.0 Installed fzf_jll ────────────────────────── v0.61.1+0 Installed libinput_jll ───────────────────── v1.28.1+0 Installed Xorg_libpciaccess_jll ──────────── v0.19.0+0 Installed CpuId ──────────────────────────── v0.3.1 Installed Fontconfig_jll ─────────────────── v2.17.1+0 Installed GroupSlices ────────────────────── v0.0.3 Installed Widgets ────────────────────────── v0.6.8 Installed NaNMath ────────────────────────── v1.1.4 Installed BSON ───────────────────────────── v0.3.9 Installed Distances ──────────────────────── v0.10.12 Installed StaticArrayInterface ───────────── v1.10.0 Installed QuadGK ─────────────────────────── v2.11.3 Installed Tables ─────────────────────────── v1.13.0 Installed Opus_jll ───────────────────────── v1.6.1+0 Installed OpenSpecFun_jll ────────────────── v0.5.6+0 Installed libva_jll ──────────────────────── v2.23.0+0 Installed Xorg_libxcb_jll ────────────────── v1.17.1+0 Installed WoodburyMatrices ───────────────── v1.1.0 Installed Ogg_jll ────────────────────────── v1.3.6+0 Installed Arpack ─────────────────────────── v0.5.4 Installed Unzip ──────────────────────────── v0.2.0 Installed Xorg_xcb_util_wm_jll ───────────── v0.4.2+0 Installed Reexport ───────────────────────── v1.2.2 Installed FFMPEG ─────────────────────────── v0.4.5 Installed DBInterface ────────────────────── v2.6.1 Installed InverseFunctions ───────────────── v0.1.17 Installed Preferences ────────────────────── v1.5.2 Installed LLVMOpenMP_jll ─────────────────── v22.1.7+0 Installed Static ─────────────────────────── v1.4.4 Installed SortingAlgorithms ──────────────── v1.2.3 Installed LERC_jll ───────────────────────── v4.1.0+0 Installed TableTraits ────────────────────── v1.0.1 Installed Missings ───────────────────────── v1.2.0 Installed LaTeXStrings ───────────────────── v1.4.0 Installed libdrm_jll ─────────────────────── v2.4.134+0 Installed Crayons ────────────────────────── v4.2.0 Installed Xorg_libICE_jll ────────────────── v1.1.2+0 Installed eudev_jll ──────────────────────── v3.2.14+0 Installed Format ─────────────────────────── v1.3.7 Installed Grisu ──────────────────────────── v1.0.2 Installed UnPack ─────────────────────────── v1.0.2 Installed DataStructures ─────────────────── v0.19.6 Installed EpollShim_jll ──────────────────── v0.0.20230411+1 (no artifacts on this platform) Installed MacroTools ─────────────────────── v0.5.16 Installed MendelImpute ───────────────────── v1.2.6 Installed FillArrays ─────────────────────── v1.17.0 Installed VCFTools ───────────────────────── v0.2.10 Installed VectorizationBase ──────────────── v0.21.74 Installed URIs ───────────────────────────── v1.6.1 Installed CodecZstd ──────────────────────── v0.8.7 Installed AbstractTrees ──────────────────── v0.4.5 Installed ManualMemory ───────────────────── v0.1.8 Installed Xorg_xcb_util_jll ──────────────── v0.4.1+0 Installed UnicodeFun ─────────────────────── v0.4.1 Installed DelimitedFiles ─────────────────── v1.9.1 Installed StatsBase ──────────────────────── v0.34.12 Installed x264_jll ───────────────────────── v10164.0.1+0 Installed Observables ────────────────────── v0.5.5 Installed ArrayInterface ─────────────────── v7.28.1 Installed Memento ────────────────────────── v1.5.0 Installed CodecZlib ──────────────────────── v0.7.8 Installed Xorg_libXau_jll ────────────────── v1.0.13+0 Installed Xorg_libXfixes_jll ─────────────── v6.0.2+0 Installed HostCPUFeatures ────────────────── v0.1.18 Installed mtdev_jll ──────────────────────── v1.1.7+0 Installed Qt6ShaderTools_jll ─────────────── v6.10.2+1 Installed JLSO ───────────────────────────── v2.7.0 Installed Clustering ─────────────────────── v0.15.8 Installed Expat_jll ──────────────────────── v2.8.2+0 Installed StructUtils ────────────────────── v2.8.2 Installed DataValueInterfaces ────────────── v1.0.0 Installed Libffi_jll ─────────────────────── v3.4.7+0 Installed Pixman_jll ─────────────────────── v0.46.4+0 Installed IrrationalConstants ────────────── v0.2.6 Installed LayoutPointers ─────────────────── v0.1.17 Installed LoggingExtras ──────────────────── v1.2.0 Installed IntegerMathUtils ───────────────── v0.1.4 Installed libdecor_jll ───────────────────── v0.2.2+0 Installed libpng_jll ─────────────────────── v1.6.58+0 Installed Xorg_libXcursor_jll ────────────── v1.2.4+0 Installed ColorVectorSpace ───────────────── v0.11.0 Installed Contour ────────────────────────── v0.6.3 Installed HTTP ───────────────────────────── v1.11.0 Installed Interpolations ─────────────────── v0.16.3 Installed BitFlags ───────────────────────── v0.1.10 Installed Roots ──────────────────────────── v3.0.6 Installed FFMPEG_jll ─────────────────────── v8.1.2+0 Installed ArrayLayouts ───────────────────── v1.12.2 Installed Xorg_xcb_util_keysyms_jll ──────── v0.4.1+0 Installed libfdk_aac_jll ─────────────────── v2.0.4+0 Installed StableRNGs ─────────────────────── v1.0.4 Installed BufferedStreams ────────────────── v1.2.2 Installed Scratch ────────────────────────── v1.3.0 Installed Qt6Declarative_jll ─────────────── v6.10.2+2 Installed PDMats ─────────────────────────── v0.11.40 Installed SimpleBufferStream ─────────────── v1.2.0 Installed Qt6Svg_jll ─────────────────────── v6.10.2+0 Installed SQLite ─────────────────────────── v1.8.1 Installed PooledArrays ───────────────────── v1.4.3 Installed CodecXz ────────────────────────── v0.7.4 Installed WorkerUtilities ────────────────── v1.6.1 Installed TableOperations ────────────────── v1.2.0 Installed DocStringExtensions ────────────── v0.9.5 Installed Plots ──────────────────────────── v1.41.6 Installed CommonSolve ────────────────────── v0.2.12 Installed KernelDensity ──────────────────── v0.6.12 Installed SLEEFPirates ───────────────────── v0.6.46 Installed CompositionsBase ───────────────── v0.1.2 Installed ColorSchemes ───────────────────── v3.31.0 Installed Rmath_jll ──────────────────────── v0.5.1+0 Installed Ghostscript_jll ────────────────── v9.55.1+0 Installed RelocatableFolders ─────────────── v1.0.1 Installed AliasTables ────────────────────── v1.1.3 Installed JLFzf ──────────────────────────── v0.1.11 Installed BitTwiddlingConvenienceFunctions ─ v0.1.6 Installed RecipesBase ────────────────────── v1.3.4 Installed ConcurrentUtilities ────────────── v2.5.1 Installed IteratorInterfaceExtensions ────── v1.0.0 Installed SIMD ───────────────────────────── v3.7.2 Installed DataAPI ────────────────────────── v1.16.0 Installed Combinatorics ──────────────────── v1.1.0 Installed CSV ────────────────────────────── v0.10.16 Installed Wayland_jll ────────────────────── v1.24.0+0 Installed InvertedIndices ────────────────── v1.3.1 Installed Xorg_libXi_jll ─────────────────── v1.8.3+0 Installed libevdev_jll ───────────────────── v1.13.4+0 Installed Measures ───────────────────────── v0.3.3 Installed StaticArraysCore ───────────────── v1.4.4 Installed Colors ─────────────────────────── v0.13.1 Installed StaticArrays ───────────────────── v1.9.18 Installed Latexify ───────────────────────── v0.16.11 Installed SciMLPublic ────────────────────── v1.2.4 Installed StringManipulation ─────────────── v0.4.6 Installed Xorg_libxkbfile_jll ────────────── v1.2.0+0 Installed Libglvnd_jll ───────────────────── v1.7.1+1 Installed AxisAlgorithms ─────────────────── v1.1.0 Installed ColorTypes ─────────────────────── v0.12.1 Installed AbstractFFTs ───────────────────── v1.5.0 Installed LogExpFunctions ────────────────── v1.0.1 Installed Xorg_xkbcomp_jll ───────────────── v1.4.7+0 Installed JSON ───────────────────────────── v1.6.1 Installed Glib_jll ───────────────────────── v2.86.3+0 Installed Vulkan_Loader_jll ──────────────── v1.3.243+0 Installed Requires ───────────────────────── v1.3.1 Installed Distributions ──────────────────── v0.25.130 Installed Xorg_xcb_util_cursor_jll ───────── v0.1.6+0 Installed PrettyTables ───────────────────── v3.4.2 Installed Parsers ────────────────────────── v2.8.6 Installed Gamma ──────────────────────────── v1.1.0 Installed Arpack_jll ─────────────────────── v3.5.2+0 Installed StatsPlots ─────────────────────── v0.15.8 Installed Rmath ──────────────────────────── v0.9.0 Installed BioGenerics ────────────────────── v0.1.5 Installed Xorg_xkeyboard_config_jll ──────── v2.47.0+2 Installed Xorg_xcb_util_renderutil_jll ───── v0.3.10+0 Installed StatsFuns ──────────────────────── v2.2.0 Installed CloseOpenIntervals ─────────────── v0.1.13 Installed Xorg_libSM_jll ─────────────────── v1.2.6+0 Installed Xorg_libXdmcp_jll ──────────────── v1.1.6+0 Installed WeakRefStrings ─────────────────── v1.4.3 Installed DataFrames ─────────────────────── v1.8.2 Installed ThreadingUtilities ─────────────── v0.5.6 Installed VariantCallFormat ──────────────── v0.5.9 Installed Pango_jll ──────────────────────── v1.57.1+0 Installed XZ_jll ─────────────────────────── v5.8.3+0 Installed x265_jll ───────────────────────── v4.1.0+0 Installed BGZFStreams ────────────────────── v0.3.2 Installed RecipesPipeline ────────────────── v0.6.12 Installed Accessors ──────────────────────── v0.1.45 Installed JLLWrappers ────────────────────── v1.8.0 Installed Primes ─────────────────────────── v0.5.7 Installed GR_jll ─────────────────────────── v0.73.26+0 Installed JpegTurbo_jll ──────────────────── v3.2.0+0 Installed Adapt ──────────────────────────── v4.7.0 Installed HypergeometricFunctions ────────── v0.3.29 Installed Xorg_xtrans_jll ────────────────── v1.6.0+0 Installed Dbus_jll ───────────────────────── v1.16.2+0 Installed FilePathsBase ──────────────────── v0.9.24 Installed JLD2 ───────────────────────────── v0.4.55 Installed Libmount_jll ───────────────────── v2.42.0+0 Installed ConstructionBase ───────────────── v1.6.0 Installed FFTA ───────────────────────────── v0.3.1 Installed TranscodingStreams ─────────────── v0.9.13 Installed Xorg_libX11_jll ────────────────── v1.8.13+0 Installed PlotUtils ──────────────────────── v1.4.4 Installed ExceptionUnwrapping ────────────── v0.1.11 Installed Compat ─────────────────────────── v4.18.1 Installed TensorCore ─────────────────────── v0.1.1 Installed LoopVectorization ──────────────── v0.12.174 Installed Statistics ─────────────────────── v1.11.1 Installed GR ─────────────────────────────── v0.73.26 Installed PrecompileTools ────────────────── v1.3.4 Installed StatsAPI ───────────────────────── v1.8.0 Installed dlfcn_win32_jll ────────────────── v1.4.2+0 (no artifacts on this platform) Installed ProgressMeter ──────────────────── v1.11.0 Installed MbedTLS ────────────────────────── v1.1.10 Installed OffsetArrays ───────────────────── v1.17.0 Installed LazyArrays ─────────────────────── v1.10.0 Installed OpenSSL ────────────────────────── v1.6.1 Installed Xorg_xcb_util_image_jll ────────── v0.4.1+0 Installed CodecBzip2 ─────────────────────── v0.8.5 Installed xkbcommon_jll ──────────────────── v1.13.0+0 Installed GettextRuntime_jll ─────────────── v0.22.4+0 Installed FriBidi_jll ────────────────────── v1.0.17+0 Installed GLFW_jll ───────────────────────── v3.4.1+1 Installed Ratios ─────────────────────────── v0.4.5 Installed CPUSummary ─────────────────────── v0.2.7 Installed MatrixFactorizations ───────────── v2.2.0 Installed ChainRulesCore ─────────────────── v1.26.1 Installed libvorbis_jll ──────────────────── v1.3.8+0 Installed LAME_jll ───────────────────────── v3.100.3+0 Installed Xorg_libXrender_jll ────────────── v0.9.12+0 Installed MuladdMacro ────────────────────── v0.2.6 Installed PtrArrays ──────────────────────── v1.4.0 Installed IfElse ─────────────────────────── v0.1.1 Installed SpecialFunctions ───────────────── v2.8.0 Installed FixedPointNumbers ──────────────── v0.8.6 Installed FreeType2_jll ──────────────────── v2.14.3+1 Installed Showoff ────────────────────────── v1.0.3 Installed Libiconv_jll ───────────────────── v1.18.0+0 Installed MbedTLS_jll ────────────────────── v2.28.1010+0 Installed Automa ─────────────────────────── v1.2.0 Installed Xorg_libXext_jll ───────────────── v1.3.8+0 Installed SQLite_jll ─────────────────────── v3.53.2+0 Installed Xorg_libXrandr_jll ─────────────── v1.5.6+0 Installed PolyesterWeave ─────────────────── v0.2.2 Installed Qt6Wayland_jll ─────────────────── v6.10.2+1 Installed SnpArrays ──────────────────────── v0.3.23 Installed BGEN ───────────────────────────── v0.1.17 Installing 83 artifacts Installed artifact LLVMOpenMP 573.2 KiB Installed artifact libass 361.1 KiB Installed artifact Xorg_libICE 254.5 KiB Installed artifact MbedTLS 1.0 MiB Installed artifact Qt6ShaderTools 1.7 MiB Installed artifact Pango 1.3 MiB Installed artifact GettextRuntime 345.6 KiB Installed artifact Libiconv 1022.9 KiB Installed artifact Xorg_libXinerama 21.7 KiB Installed artifact Arpack 110.5 KiB Installed artifact Xorg_xcb_util_cursor 24.2 KiB Installed artifact Xorg_libXext 187.3 KiB Installed artifact libva 187.1 KiB Installed artifact Pixman 343.0 KiB Installed artifact Xorg_libXfixes 41.4 KiB Installed artifact Qt6Svg 303.6 KiB Installed artifact Xorg_libX11 2.3 MiB Installed artifact Expat 255.2 KiB Installed artifact Xorg_libXrandr 69.9 KiB Installed artifact Rmath 111.5 KiB Installed artifact Bzip2 152.8 KiB Installed artifact Xorg_libXrender 174.0 KiB Installed artifact Vulkan_Loader 146.2 KiB Installed artifact libdrm 304.7 KiB Installed artifact xkbcommon 252.5 KiB Installed artifact mtdev 55.5 KiB Installed artifact Opus 792.2 KiB Installed artifact Xorg_libXi 500.2 KiB Installed artifact LERC 220.3 KiB Installed artifact Xorg_xcb_util_wm 95.5 KiB Installed artifact libpng 234.7 KiB Installed artifact Fontconfig 443.8 KiB Installed artifact LAME 243.9 KiB Installed artifact Libuuid 1.9 MiB Installed artifact Xorg_xcb_util_keysyms 14.3 KiB Installed artifact Xorg_xcb_util_renderutil 22.4 KiB Installed artifact FFMPEG 10.2 MiB Installed artifact Xorg_xcb_util 26.3 KiB Installed artifact Xorg_libSM 104.8 KiB Installed artifact libvorbis 226.3 KiB Installed artifact Dbus 398.5 KiB Installed artifact eudev 2.3 MiB Installed artifact x264 908.7 KiB Installed artifact Libmount 3.4 MiB Installed artifact Graphite2 109.8 KiB Installed artifact HarfBuzz 1.2 MiB Installed artifact libfdk_aac 2.4 MiB Installed artifact Xorg_libxkbfile 81.0 KiB Installed artifact FriBidi 67.6 KiB Installed artifact Libglvnd 482.2 KiB Installed artifact x265 1.1 MiB Installed artifact Xorg_libXau 25.8 KiB Installed artifact Xorg_xcb_util_image 33.8 KiB Installed artifact libevdev 91.2 KiB Installed artifact Xorg_libXcursor 137.4 KiB Installed artifact Xorg_libxcb 1.3 MiB Installed artifact testfiles 4.4 MiB Installed artifact Libtiff 1.7 MiB Installed artifact Libffi 39.2 KiB Installed artifact Qt6Wayland 930.6 KiB Installed artifact Ogg 213.4 KiB Installed artifact Xorg_libpciaccess 23.4 KiB Installed artifact OpenSpecFun 105.4 KiB Installed artifact GLFW 159.6 KiB Installed artifact FreeType2 1.2 MiB Installed artifact Xorg_xkeyboard_config 375.9 KiB Installed artifact Xorg_libXdmcp 49.9 KiB Installed artifact libinput 555.0 KiB Installed artifact XZ 1018.2 KiB Installed artifact JpegTurbo 705.6 KiB Installed artifact libdecor 36.5 KiB Installed artifact Wayland 266.5 KiB Installed artifact Xorg_xtrans 39.5 KiB Installed artifact SQLite 1.2 MiB Installed artifact Cairo 1.5 MiB Installed artifact Glib 4.2 MiB Installed artifact fzf 3.0 MiB Installed artifact Xorg_xkbcomp 230.5 KiB Installed artifact GR 15.1 MiB Installed artifact libaom 3.9 MiB Installed artifact Qt6Declarative 15.7 MiB Installed artifact Qt6Base 17.1 MiB Installed artifact Ghostscript 30.0 MiB Updating `~/.julia/environments/v1.14/Project.toml` [e47305d1] + MendelImpute v1.2.6 Updating `~/.julia/environments/v1.14/Manifest.toml` [621f4979] + AbstractFFTs v1.5.0 [1520ce14] + AbstractTrees v0.4.5 [7d9f7c33] + Accessors v0.1.45 [79e6a3ab] + Adapt v4.7.0 [66dad0bd] + AliasTables v1.1.3 [7d9fca2a] + Arpack v0.5.4 [4fba245c] + ArrayInterface v7.28.1 [4c555306] + ArrayLayouts v1.12.2 [67c07d97] + Automa v1.2.0 [13072b0f] + AxisAlgorithms v1.1.0 ⌅ [6db4b851] + BGEN v0.1.17 [28d598bf] + BGZFStreams v0.3.2 [fbb218c0] + BSON v0.3.9 [47718e42] + BioGenerics v0.1.5 [d1d4a3ce] + BitFlags v0.1.10 [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 [e1450e63] + BufferedStreams v1.2.2 [2a0fbf3d] + CPUSummary v0.2.7 [336ed68f] + CSV v0.10.16 [d360d2e6] + ChainRulesCore v1.26.1 [fb6a15b2] + CloseOpenIntervals v0.1.13 [aaaa29a8] + Clustering v0.15.8 [523fee87] + CodecBzip2 v0.8.5 [ba30903b] + CodecXz v0.7.4 [944b1d66] + CodecZlib v0.7.8 [6b39b394] + CodecZstd v0.8.7 [35d6a980] + ColorSchemes v3.31.0 [3da002f7] + ColorTypes v0.12.1 [c3611d14] + ColorVectorSpace v0.11.0 [5ae59095] + Colors v0.13.1 [861a8166] + Combinatorics v1.1.0 [38540f10] + CommonSolve v0.2.12 [f70d9fcc] + CommonWorldInvalidations v1.1.1 [34da2185] + Compat v4.18.1 [a33af91c] + CompositionsBase v0.1.2 [f0e56b4a] + ConcurrentUtilities v2.5.1 [187b0558] + ConstructionBase v1.6.0 [d38c429a] + Contour v0.6.3 [adafc99b] + CpuId v0.3.1 [a8cc5b0e] + Crayons v4.2.0 [a10d1c49] + DBInterface v2.6.1 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.8.2 [864edb3b] + DataStructures v0.19.6 [e2d170a0] + DataValueInterfaces v1.0.0 [8bb1440f] + DelimitedFiles v1.9.1 [b4f34e82] + Distances v0.10.12 [31c24e10] + Distributions v0.25.130 [ffbed154] + DocStringExtensions v0.9.5 [460bff9d] + ExceptionUnwrapping v0.1.11 [c87230d0] + FFMPEG v0.4.5 [b86e33f2] + FFTA v0.3.1 [5789e2e9] + FileIO v1.20.0 [48062228] + FilePathsBase v0.9.24 [1a297f60] + FillArrays v1.17.0 ⌅ [53c48c17] + FixedPointNumbers v0.8.6 [1fa38f19] + Format v1.3.7 [28b8d3ca] + GR v0.73.26 [a0844989] + Gamma v1.1.0 [c27321d9] + Glob v1.5.0 [42e2da0e] + Grisu v1.0.2 [d853e229] + GroupSlices v0.0.3 ⌅ [cd3eb016] + HTTP v1.11.0 [3e5b6fbb] + HostCPUFeatures v0.1.18 [34004b35] + HypergeometricFunctions v0.3.29 [09f84164] + HypothesisTests v0.11.8 [615f187c] + IfElse v0.1.1 [842dd82b] + InlineStrings v1.4.5 [18e54dd8] + IntegerMathUtils v0.1.4 [a98d9a8b] + Interpolations v0.16.3 [3587e190] + InverseFunctions v0.1.17 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.6 [82899510] + IteratorInterfaceExtensions v1.0.0 ⌅ [033835bb] + JLD2 v0.4.55 [1019f520] + JLFzf v0.1.11 [692b3bcd] + JLLWrappers v1.8.0 [9da8a3cd] + JLSO v2.7.0 [682c06a0] + JSON v1.6.1 [5ab0869b] + KernelDensity v0.6.12 [b964fa9f] + LaTeXStrings v1.4.0 [23fbe1c1] + Latexify v0.16.11 [10f19ff3] + LayoutPointers v0.1.17 ⌅ [5078a376] + LazyArrays v1.10.0 [2ab3a3ac] + LogExpFunctions v1.0.1 [e6f89c97] + LoggingExtras v1.2.0 [bdcacae8] + LoopVectorization v0.12.174 [1914dd2f] + MacroTools v0.5.16 [d125e4d3] + ManualMemory v0.1.8 ⌅ [a3b82374] + MatrixFactorizations v2.2.0 [739be429] + MbedTLS v1.1.10 [442fdcdd] + Measures v0.3.3 [f28f55f0] + Memento v1.5.0 [e47305d1] + MendelImpute v1.2.6 [e1d29d7a] + Missings v1.2.0 [46d2c3a1] + MuladdMacro v0.2.6 [6f286f6a] + MultivariateStats v0.10.4 [77ba4419] + NaNMath v1.1.4 [b8a86587] + NearestNeighbors v0.4.29 [510215fc] + Observables v0.5.5 [6fe1bfb0] + OffsetArrays v1.17.0 [4d8831e6] + OpenSSL v1.6.1 ⌅ [bac558e1] + OrderedCollections v1.8.2 [90014a1f] + PDMats v0.11.40 [69de0a69] + Parsers v2.8.6 [ccf2f8ad] + PlotThemes v3.3.0 [995b91a9] + PlotUtils v1.4.4 [91a5bcdd] + Plots v1.41.6 [1d0040c9] + PolyesterWeave v0.2.2 [2dfb63ee] + PooledArrays v1.4.3 [aea7be01] + PrecompileTools v1.3.4 [21216c6a] + Preferences v1.5.2 [08abe8d2] + PrettyTables v3.4.2 [27ebfcd6] + Primes v0.5.7 [92933f4c] + ProgressMeter v1.11.0 [43287f4e] + PtrArrays v1.4.0 [1fd47b50] + QuadGK v2.11.3 [c84ed2f1] + Ratios v0.4.5 [3cdcf5f2] + RecipesBase v1.3.4 [01d81517] + RecipesPipeline v0.6.12 [189a3867] + Reexport v1.2.2 [05181044] + RelocatableFolders v1.0.1 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.9.0 [f2b01f46] + Roots v3.0.6 [fdea26ae] + SIMD v3.7.2 [94e857df] + SIMDTypes v0.1.0 [476501e8] + SLEEFPirates v0.6.46 [0aa819cd] + SQLite v1.8.1 [431bcebd] + SciMLPublic v1.2.4 [6c6a2e73] + Scratch v1.3.0 [91c51154] + SentinelArrays v1.4.10 [992d4aef] + Showoff v1.0.3 [777ac1f9] + SimpleBufferStream v1.2.0 [4e780e97] + SnpArrays v0.3.23 [a2af1166] + SortingAlgorithms v1.2.3 [276daf66] + SpecialFunctions v2.8.0 [860ef19b] + StableRNGs v1.0.4 [aedffcd0] + Static v1.4.4 [0d7ed370] + StaticArrayInterface v1.10.0 [90137ffa] + StaticArrays v1.9.18 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 [2913bbd2] + StatsBase v0.34.12 [4c63d2b9] + StatsFuns v2.2.0 [f3b207a7] + StatsPlots v0.15.8 [892a3eda] + StringManipulation v0.4.6 [ec057cc2] + StructUtils v2.8.2 [ab02a1b2] + TableOperations v1.2.0 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.13.0 [62fd8b95] + TensorCore v0.1.1 [8290d209] + ThreadingUtilities v0.5.6 ⌅ [3bb67fe8] + TranscodingStreams v0.9.13 [5c2747f8] + URIs v1.6.1 [3a884ed6] + UnPack v1.0.2 [1cfade01] + UnicodeFun v0.4.1 [41fe7b60] + Unzip v0.2.0 [a620830f] + VCFTools v0.2.10 [28eba6e3] + VariantCallFormat v0.5.9 [3d5dd08c] + VectorizationBase v0.21.74 [ea10d353] + WeakRefStrings v1.4.3 [cc8bc4a8] + Widgets v0.6.8 [efce3f68] + WoodburyMatrices v1.1.0 [76eceee3] + WorkerUtilities v1.6.1 ⌅ [68821587] + Arpack_jll v3.5.2+0 [6e34b625] + Bzip2_jll v1.0.9+0 [83423d85] + Cairo_jll v1.18.7+0 [ee1fde0b] + Dbus_jll v1.16.2+0 [2702e6a9] + EpollShim_jll v0.0.20230411+1 [2e619515] + Expat_jll v2.8.2+0 [b22a6f82] + FFMPEG_jll v8.1.2+0 [a3f928ae] + Fontconfig_jll v2.17.1+0 [d7e528f0] + FreeType2_jll v2.14.3+1 [559328eb] + FriBidi_jll v1.0.17+0 [0656b61e] + GLFW_jll v3.4.1+1 [d2c73de3] + GR_jll v0.73.26+0 ⌅ [b0724c58] + GettextRuntime_jll v0.22.4+0 [61579ee1] + Ghostscript_jll v9.55.1+0 [7746bdde] + Glib_jll v2.86.3+0 [3b182d85] + Graphite2_jll v1.3.16+0 ⌅ [2e76f6c2] + HarfBuzz_jll v8.5.1+0 [aacddb02] + JpegTurbo_jll v3.2.0+0 [c1c5ebd0] + LAME_jll v3.100.3+0 [88015f11] + LERC_jll v4.1.0+0 [1d63c593] + LLVMOpenMP_jll v22.1.7+0 ⌅ [e9f186c6] + Libffi_jll v3.4.7+0 [7e76a0d4] + Libglvnd_jll v1.7.1+1 [94ce4f54] + Libiconv_jll v1.18.0+0 [4b2f31a3] + Libmount_jll v2.42.0+0 [89763e89] + Libtiff_jll v4.7.3+0 [38a345b3] + Libuuid_jll v2.42.0+0 [c8ffd9c3] + MbedTLS_jll v2.28.1010+0 [e7412a2a] + Ogg_jll v1.3.6+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [91d4177d] + Opus_jll v1.6.1+0 [36c8627f] + Pango_jll v1.57.1+0 [30392449] + Pixman_jll v0.46.4+0 [c0090381] + Qt6Base_jll v6.10.2+2 [629bc702] + Qt6Declarative_jll v6.10.2+2 [ce943373] + Qt6ShaderTools_jll v6.10.2+1 [6de9746b] + Qt6Svg_jll v6.10.2+0 [e99dba38] + Qt6Wayland_jll v6.10.2+1 [f50d1b31] + Rmath_jll v0.5.1+0 [76ed43ae] + SQLite_jll v3.53.2+0 [a44049a8] + Vulkan_Loader_jll v1.3.243+0 [a2964d1f] + Wayland_jll v1.24.0+0 [ffd25f8a] + XZ_jll v5.8.3+0 [f67eecfb] + Xorg_libICE_jll v1.1.2+0 [c834827a] + Xorg_libSM_jll v1.2.6+0 [4f6342f7] + Xorg_libX11_jll v1.8.13+0 [0c0b7dd1] + Xorg_libXau_jll v1.0.13+0 [935fb764] + Xorg_libXcursor_jll v1.2.4+0 [a3789734] + Xorg_libXdmcp_jll v1.1.6+0 [1082639a] + Xorg_libXext_jll v1.3.8+0 [d091e8ba] + Xorg_libXfixes_jll v6.0.2+0 [a51aa0fd] + Xorg_libXi_jll v1.8.3+0 [d1454406] + Xorg_libXinerama_jll v1.1.7+0 [ec84b674] + Xorg_libXrandr_jll v1.5.6+0 [ea2f1a96] + Xorg_libXrender_jll v0.9.12+0 [a65dc6b1] + Xorg_libpciaccess_jll v0.19.0+0 [c7cfdc94] + Xorg_libxcb_jll v1.17.1+0 [cc61e674] + Xorg_libxkbfile_jll v1.2.0+0 [e920d4aa] + Xorg_xcb_util_cursor_jll v0.1.6+0 [12413925] + Xorg_xcb_util_image_jll v0.4.1+0 [2def613f] + Xorg_xcb_util_jll v0.4.1+0 [975044d2] + Xorg_xcb_util_keysyms_jll v0.4.1+0 [0d47668e] + Xorg_xcb_util_renderutil_jll v0.3.10+0 [c22f9ab0] + Xorg_xcb_util_wm_jll v0.4.2+0 [35661453] + Xorg_xkbcomp_jll v1.4.7+0 [33bec58e] + Xorg_xkeyboard_config_jll v2.47.0+2 [c5fb5394] + Xorg_xtrans_jll v1.6.0+0 [c4b69c83] + dlfcn_win32_jll v1.4.2+0 [35ca27e7] + eudev_jll v3.2.14+0 [214eeab7] + fzf_jll v0.61.1+0 [a4ae2306] + libaom_jll v3.13.3+0 [0ac62f75] + libass_jll v0.17.4+0 [1183f4f0] + libdecor_jll v0.2.2+0 [8e53e030] + libdrm_jll v2.4.134+0 [2db6ffa8] + libevdev_jll v1.13.4+0 [f638f0a6] + libfdk_aac_jll v2.0.4+0 [36db933b] + libinput_jll v1.28.1+0 [b53b4c65] + libpng_jll v1.6.58+0 [9a156e7d] + libva_jll v2.23.0+0 [f27f6e37] + libvorbis_jll v1.3.8+0 [009596ad] + mtdev_jll v1.1.7+0 ⌅ [1270edf5] + x264_jll v10164.0.1+0 [dfaa095f] + x265_jll v4.1.0+0 [d8fb68d0] + xkbcommon_jll v1.13.0+0 [0dad84c5] + ArgTools v1.2.0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0 [b27032c2] + LibCURL v1.0.0 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.14.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.14.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.13.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.13.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.5.7+0 [deac9b47] + LibCURL_jll v8.21.0+0 [e37daf67] + LibGit2_jll v1.9.6+0 [29816b5a] + LibSSH2_jll v1.11.103+0 [14a3606d] + MozillaCACerts_jll v2026.7.16 [4536629a] + OpenBLAS_jll v0.3.34+0 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.7+0 [efcefdf7] + PCRE2_jll v10.47.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.2+0 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.69.0+0 [3f19e933] + p7zip_jll v17.8.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 28.45s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling project... 4.5 s ✓ TestEnv 1 dependency successfully precompiled in 5 seconds. 27 already precompiled. Precompiling package dependencies... Precompiling project... 4.3 s ✓ MacroTools 1.3 s ✓ InlineStrings 0.5 s ✓ Reexport 0.8 s ✓ TensorCore 0.7 s ✓ ConstructionBase 1.8 s ✓ IrrationalConstants 1.1 s ✓ Measures 0.5 s ✓ DataValueInterfaces 0.5 s ✓ StatsAPI 1.9 s ✓ Format 0.7 s ✓ Observables 1.8 s ✓ Combinatorics 0.6 s ✓ Contour 0.5 s ✓ CommonSolve 0.5 s ✓ LaTeXStrings 0.6 s ✓ Glob 0.8 s ✓ Statistics 0.6 s ✓ StaticArraysCore 0.6 s ✓ StableRNGs 0.5 s ✓ IfElse 0.5 s ✓ PtrArrays 0.5 s ✓ SimpleBufferStream 0.9 s ✓ Grisu 0.5 s ✓ ManualMemory 0.5 s ✓ Adapt 0.5 s ✓ DataAPI 0.4 s ✓ SciMLPublic 0.4 s ✓ CommonWorldInvalidations 0.8 s ✓ URIs 0.5 s ✓ InvertedIndices 0.6 s ✓ InverseFunctions 0.5 s ✓ BitFlags 0.6 s ✓ CompositionsBase 0.8 s ✓ AbstractTrees 1.2 s ✓ AbstractFFTs 0.9 s ✓ WorkerUtilities 1.6 s ✓ FillArrays 0.7 s ✓ IntegerMathUtils 0.4 s ✓ UnPack 0.4 s ✓ DBInterface 0.9 s ✓ OrderedCollections 0.5 s ✓ GroupSlices 0.6 s ✓ DocStringExtensions 1.1 s ✓ BSON 0.6 s ✓ Unzip 0.7 s ✓ Gamma 0.9 s ✓ OffsetArrays 0.5 s ✓ BufferedStreams 0.3 s ✓ SIMDTypes 0.3 s ✓ IteratorInterfaceExtensions 1.3 s ✓ Crayons 0.5 s ✓ NaNMath 0.5 s ✓ Requires 0.9 s ✓ ConcurrentUtilities 1.9 s ✓ ProgressMeter 0.6 s ✓ DelimitedFiles 1.5 s ✓ WoodburyMatrices 1.1 s ✓ Scratch 1.8 s ✓ SentinelArrays 1.4 s ✓ LoggingExtras 1.4 s ✓ StructUtils 1.5 s ✓ CpuId 1.9 s ✓ PDMats 0.8 s ✓ Compat 1.3 s ✓ Preferences 1.9 s ✓ TranscodingStreams 2.3 s ✓ ExceptionUnwrapping 3.7 s ✓ UnicodeFun 0.5 s ✓ ConstructionBase → ConstructionBaseLinearAlgebraExt 1.5 s ✓ Statistics → SparseArraysExt 2.2 s ✓ FixedPointNumbers 1.1 s ✓ Distances 0.6 s ✓ AliasTables 0.8 s ✓ Showoff 1.3 s ✓ ThreadingUtilities 0.8 s ✓ ArrayInterface 1.4 s ✓ Adapt → AdaptSparseArraysExt 0.8 s ✓ Missings 0.7 s ✓ PooledArrays 1.1 s ✓ InverseFunctions → InverseFunctionsDatesExt 1.5 s ✓ InverseFunctions → InverseFunctionsTestExt 4.1 s ✓ OpenSSL 0.5 s ✓ CompositionsBase → CompositionsBaseInverseFunctionsExt 3.8 s ✓ AbstractFFTs → AbstractFFTsTestExt 1.8 s ✓ FillArrays → FillArraysSparseArraysExt 0.9 s ✓ FillArrays → FillArraysStatisticsExt 0.9 s ✓ Primes 3.4 s ✓ DataStructures 1.1 s ✓ LogExpFunctions 1.6 s ✓ HypergeometricFunctions 0.5 s ✓ OffsetArrays → OffsetArraysAdaptExt 0.5 s ✓ TableTraits 0.5 s ✓ Ratios 4.8 s ✓ Memento 7.2 s ✓ FileIO 1.4 s ✓ AxisAlgorithms 1.2 s ✓ RelocatableFolders 0.8 s ✓ StructUtils → StructUtilsStaticArraysCoreExt 1.7 s ✓ FillArrays → FillArraysPDMatsExt 0.5 s ✓ Compat → CompatLinearAlgebraExt 1.6 s ✓ PrecompileTools 1.1 s ✓ JLLWrappers 1.3 s ✓ BioGenerics 1.9 s ✓ CodecZstd 1.4 s ✓ CodecZlib 2.5 s ✓ ColorTypes 1.4 s ✓ Distances → DistancesSparseArraysExt 0.9 s ✓ ArrayInterface → ArrayInterfaceFillArraysExt 0.5 s ✓ ArrayInterface → ArrayInterfaceStaticArraysCoreExt 2.0 s ✓ ArrayInterface → ArrayInterfaceSparseArraysExt 4.2 s ✓ Accessors 1.0 s ✓ SortingAlgorithms 2.1 s ✓ QuadGK 0.6 s ✓ LogExpFunctions → LogExpFunctionsInverseFunctionsExt 2.3 s ✓ Tables 0.6 s ✓ Ratios → RatiosFixedPointNumbersExt 2.4 s ✓ ChainRulesCore 2.0 s ✓ FilePathsBase 7.5 s ✓ StringManipulation 12.9 s ✓ SIMD 14.2 s ✓ StaticArrays 2.2 s ✓ MuladdMacro 19.0 s ✓ Automa 3.2 s ✓ RecipesBase 10.2 s ✓ Parsers 2.7 s ✓ Static 45.5 s ✓ JLD2 1.5 s ✓ Libffi_jll 1.1 s ✓ Xorg_libICE_jll 1.2 s ✓ eudev_jll 1.2 s ✓ mtdev_jll 1.1 s ✓ Bzip2_jll 1.3 s ✓ XZ_jll 1.1 s ✓ Rmath_jll 1.1 s ✓ OpenSpecFun_jll 1.0 s ✓ Xorg_xtrans_jll 1.3 s ✓ Opus_jll 1.1 s ✓ x265_jll 1.1 s ✓ fzf_jll 1.0 s ✓ libpng_jll 1.2 s ✓ Arpack_jll 1.0 s ✓ EpollShim_jll 1.3 s ✓ Libmount_jll 1.0 s ✓ libfdk_aac_jll 1.1 s ✓ Libuuid_jll 1.1 s ✓ FriBidi_jll 1.0 s ✓ LERC_jll 1.2 s ✓ Xorg_libXau_jll 0.8 s ✓ dlfcn_win32_jll 1.4 s ✓ Ogg_jll 1.2 s ✓ libevdev_jll 1.6 s ✓ LAME_jll 1.1 s ✓ Graphite2_jll 1.2 s ✓ x264_jll 1.1 s ✓ Xorg_libpciaccess_jll 1.5 s ✓ LLVMOpenMP_jll 1.1 s ✓ Libiconv_jll 1.2 s ✓ MbedTLS_jll 1.2 s ✓ libaom_jll 1.7 s ✓ Xorg_libXdmcp_jll 1.1 s ✓ Expat_jll 1.3 s ✓ JpegTurbo_jll 1.5 s ✓ BGZFStreams 1.1 s ✓ ColorTypes → StyledStringsExt 5.2 s ✓ Colors 1.5 s ✓ ColorVectorSpace 1.9 s ✓ Accessors → TestExt 2.4 s ✓ Accessors → LinearAlgebraExt 4.5 s ✓ StatsBase 1.1 s ✓ TableOperations 0.8 s ✓ StructUtils → StructUtilsTablesExt 1.5 s ✓ ChainRulesCore → ChainRulesCoreSparseArraysExt 0.6 s ✓ AbstractFFTs → AbstractFFTsChainRulesCoreExt 0.6 s ✓ Distances → DistancesChainRulesCoreExt 0.5 s ✓ ArrayInterface → ArrayInterfaceChainRulesCoreExt 2.9 s ✓ LogExpFunctions → LogExpFunctionsChainRulesCoreExt 2.4 s ✓ FilePathsBase → FilePathsBaseTestExt 0.8 s ✓ FilePathsBase → FilePathsBaseMmapExt 44.5 s ✓ PrettyTables 1.3 s ✓ StaticArrays → StaticArraysStatisticsExt 1.4 s ✓ StaticArrays → StaticArraysChainRulesCoreExt 1.3 s ✓ ConstructionBase → ConstructionBaseStaticArraysExt 1.4 s ✓ Adapt → AdaptStaticArraysExt 1.8 s ✓ FillArrays → FillArraysStaticArraysExt 1.3 s ✓ Accessors → StaticArraysExt 2.2 s ✓ FFTA 6.3 s ✓ JSON 0.8 s ✓ InlineStrings → ParsersExt 0.9 s ✓ BitTwiddlingConvenienceFunctions 2.7 s ✓ CPUSummary 3.0 s ✓ StaticArrayInterface 1.1 s ✓ Xorg_libSM_jll 1.6 s ✓ CodecBzip2 1.2 s ✓ FreeType2_jll 1.6 s ✓ CodecXz 1.6 s ✓ Rmath 5.2 s ✓ SpecialFunctions 2.4 s ✓ JLFzf 1.2 s ✓ Arpack 1.3 s ✓ SQLite_jll 1.2 s ✓ libvorbis_jll 1.3 s ✓ libinput_jll 1.8 s ✓ libdrm_jll 1.2 s ✓ Pixman_jll 1.3 s ✓ GettextRuntime_jll 1.5 s ✓ MbedTLS 1.3 s ✓ Xorg_libxcb_jll 1.2 s ✓ Dbus_jll 1.3 s ✓ Wayland_jll 1.3 s ✓ Ghostscript_jll 1.3 s ✓ Libtiff_jll [ Info: Compiling VCF parser... 16.9 s ✓ VariantCallFormat 2.0 s ✓ Widgets 9.8 s ✓ ColorSchemes 5.4 s ✓ Roots 1.8 s ✓ PDMats → StatsBaseExt 7.8 s ✓ JLSO 85.7 s ✓ DataFrames 8.4 s ✓ NearestNeighbors 4.8 s ✓ Interpolations 21.8 s ✓ ArrayLayouts 8.2 s ✓ BenchmarkTools 1.7 s ✓ WeakRefStrings 1.3 s ✓ HostCPUFeatures 1.6 s ✓ PolyesterWeave 0.7 s ✓ StaticArrayInterface → StaticArrayInterfaceOffsetArraysExt 1.1 s ✓ StaticArrayInterface → StaticArrayInterfaceStaticArraysExt 0.7 s ✓ CloseOpenIntervals 0.8 s ✓ LayoutPointers 1.3 s ✓ Fontconfig_jll 2.5 s ✓ SpecialFunctions → SpecialFunctionsChainRulesCoreExt 1.1 s ✓ ColorVectorSpace → SpecialFunctionsExt 1.7 s ✓ StatsFuns 0.9 s ✓ Glib_jll 25.6 s ✓ HTTP 1.2 s ✓ Xorg_xcb_util_jll 1.2 s ✓ Xorg_libX11_jll 5.6 s ✓ Latexify 21.3 s ✓ PlotUtils 1.0 s ✓ Roots → RootsChainRulesCoreExt 4.1 s ✓ Clustering 4.6 s ✓ ArrayLayouts → ArrayLayoutsSparseArraysExt 4.2 s ✓ MatrixFactorizations 25.1 s ✓ CSV 5.0 s ✓ SQLite 17.4 s ✓ VectorizationBase 3.3 s ✓ StatsFuns → StatsFunsChainRulesCoreExt 1.1 s ✓ StatsFuns → StatsFunsInverseFunctionsExt 6.2 s ✓ FileIO → HTTPExt 1.6 s ✓ Xorg_xcb_util_renderutil_jll 1.3 s ✓ Xorg_xcb_util_wm_jll 1.2 s ✓ Xorg_xcb_util_image_jll 1.2 s ✓ Xorg_xcb_util_keysyms_jll 1.3 s ✓ Xorg_libXfixes_jll 1.3 s ✓ Xorg_libXrender_jll 1.3 s ✓ Xorg_libXext_jll 1.2 s ✓ Xorg_libxkbfile_jll 2.8 s ✓ Latexify → SparseArraysExt 6.9 s ✓ Latexify → DataFramesExt 10.7 s ✓ PlotThemes 8.9 s ✓ RecipesPipeline WARNING: Constructor for type "MemoryLayout" was extended in `LazyArrays` without explicit qualification or import. NOTE: Assumed "MemoryLayout" refers to `ArrayLayouts.MemoryLayout`. This behavior is deprecated and may differ in future versions. NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function MemoryLayout end`. Hint: To silence the warning, qualify `MemoryLayout` as `ArrayLayouts.MemoryLayout` in the method signature or explicitly `import ArrayLayouts: MemoryLayout`. 7.7 s ✓ LazyArrays 3.8 s ✓ BGEN 2.9 s ✓ SLEEFPirates 10.3 s ✓ Distributions 1.2 s ✓ Xorg_xcb_util_cursor_jll 2.1 s ✓ Xorg_libXcursor_jll 1.2 s ✓ Xorg_libXrandr_jll 1.3 s ✓ Xorg_libXinerama_jll 1.2 s ✓ Xorg_libXi_jll 1.4 s ✓ Cairo_jll 1.3 s ✓ libva_jll 1.1 s ✓ Libglvnd_jll 1.1 s ✓ Xorg_xkbcomp_jll 5.0 s ✓ LazyArrays → LazyArraysStaticArraysExt 41.4 s ✓ LoopVectorization 4.4 s ✓ Distributions → DistributionsTestExt 3.9 s ✓ Distributions → DistributionsChainRulesCoreExt 4.6 s ✓ HypothesisTests 4.2 s ✓ MultivariateStats 1.3 s ✓ HarfBuzz_jll 1.0 s ✓ Xorg_xkeyboard_config_jll 3.0 s ✓ LoopVectorization → SpecialFunctionsExt 5.0 s ✓ KernelDensity 6.1 s ✓ VCFTools 1.3 s ✓ libass_jll 1.2 s ✓ Pango_jll 1.1 s ✓ xkbcommon_jll julia: /source/src/staticdata.c:216: jl_object_in_image: Assertion `eyt_tree_is_in_range(&image_tree, (uintptr_t)obj) == in_image' failed. [2178] signal 6 (-6): Aborted in expression starting at none:0 unknown function (ip: 0x797251213ebc) at /lib/x86_64-linux-gnu/libc.so.6 gsignal at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) abort at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x7972511af394) at /lib/x86_64-linux-gnu/libc.so.6 __assert_fail at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) jl_object_in_image at /source/src/staticdata.c:216:5 [inlined] jl_object_in_image at /source/src/staticdata.c:210:22 needs_uniquing at /source/src/staticdata.c:422:5 jl_insert_into_serialization_queue at /source/src/staticdata.c:606:45 jl_insert_into_serialization_queue at /source/src/staticdata.c:867:17 jl_serialize_reachable at /source/src/staticdata.c:1050:13 jl_save_system_image_to_stream at /source/src/staticdata.c:3098:9 [inlined] ijl_create_system_image at /source/src/staticdata.c:3473:5 ijl_write_compiler_output at /source/src/precompile.c:140:5 ijl_atexit_hook at /source/src/init.c:276:9 jl_repl_entrypoint at /source/src/jlapi.c:1157:9 main at /source/cli/loader_exe.c:117:15 unknown function (ip: 0x7972511b0249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S Allocations: 6379571 (Pool: 6379332; Big: 239); GC: 11 ✗ SnpArrays 1.3 s ✓ FFMPEG_jll 1.3 s ✓ Vulkan_Loader_jll 1.3 s ✓ libdecor_jll 0.9 s ✓ FFMPEG 1.4 s ✓ Qt6Base_jll 1.2 s ✓ GLFW_jll 1.5 s ✓ Qt6ShaderTools_jll 1.4 s ✓ Qt6Svg_jll 1.4 s ✓ GR_jll 1.6 s ✓ Qt6Declarative_jll 1.6 s ✓ Qt6Wayland_jll 5.6 s ✓ GR 119.8 s ✓ Plots 16.9 s ✓ Plots → FileIOExt 20.1 s ✓ StatsPlots ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("4e780e97-f5bf-4111-9dc4-b70aaf691b06"), "SnpArrays") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0) Stacktrace: [1] error(s::String) @ Base error.jl:56 [2] __require_prelocked(pkg::Base.PkgId, env::String) @ Base loading.jl:2891 [3] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base loading.jl:2739 [4] macro expansion @ loading.jl:2653 [inlined] [5] macro expansion @ lock.jl:376 [inlined] [6] __require(into::Module, mod::Symbol) @ Base loading.jl:2617 [7] require(into::Module, mod::Symbol) @ Base loading.jl:2593 [inlined] [8] eval_import_path(at::Module, from::Nothing, path::Expr, keyword::String) @ Base module.jl:36 [inlined] [9] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base module.jl:60 [10] _eval_using(to::Module, path::Expr, flags::UInt8) @ Base module.jl:137 [inlined] [11] top-level scope @ ~/.julia/packages/MendelImpute/z2M6N/src/MendelImpute.jl:5 [12] include(mod::Module, _path::String) @ Base Base.jl:329 [13] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base loading.jl:3359 [14] top-level scope @ stdin:5 in expression starting at /home/pkgeval/.julia/packages/MendelImpute/z2M6N/src/MendelImpute.jl:1 in expression starting at stdin:5 ✗ MendelImpute 303 dependencies successfully precompiled in 1125 seconds. 41 already precompiled. 4 dependencies had output during precompilation: ┌ SnpArrays │ julia: /source/src/staticdata.c:216: jl_object_in_image: Assertion `eyt_tree_is_in_range(&image_tree, (uintptr_t)obj) == in_image' failed. │ │ [2178] signal 6 (-6): Aborted │ in expression starting at none:0 │ unknown function (ip: 0x797251213ebc) at /lib/x86_64-linux-gnu/libc.so.6 │ gsignal at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) │ abort at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) │ unknown function (ip: 0x7972511af394) at /lib/x86_64-linux-gnu/libc.so.6 │ __assert_fail at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) │ jl_object_in_image at /source/src/staticdata.c:216:5 [inlined] │ jl_object_in_image at /source/src/staticdata.c:210:22 │ needs_uniquing at /source/src/staticdata.c:422:5 │ jl_insert_into_serialization_queue at /source/src/staticdata.c:606:45 │ jl_insert_into_serialization_queue at /source/src/staticdata.c:867:17 │ jl_serialize_reachable at /source/src/staticdata.c:1050:13 │ jl_save_system_image_to_stream at /source/src/staticdata.c:3098:9 [inlined] │ ijl_create_system_image at /source/src/staticdata.c:3473:5 │ ijl_write_compiler_output at /source/src/precompile.c:140:5 │ ijl_atexit_hook at /source/src/init.c:276:9 │ jl_repl_entrypoint at /source/src/jlapi.c:1157:9 │ main at /source/cli/loader_exe.c:117:15 │ unknown function (ip: 0x7972511b0249) at /lib/x86_64-linux-gnu/libc.so.6 │ __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) │ unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S │ Allocations: 6379571 (Pool: 6379332; Big: 239); GC: 11 └ ┌ VariantCallFormat │ [ Info: Compiling VCF parser... └ ┌ MendelImpute │ ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("4e780e97-f5bf-4111-9dc4-b70aaf691b06"), "SnpArrays") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0) │ Stacktrace: │ [1] error(s::String) │ @ Base error.jl:56 │ [2] __require_prelocked(pkg::Base.PkgId, env::String) │ @ Base loading.jl:2891 │ [3] _require_prelocked(uuidkey::Base.PkgId, env::String) │ @ Base loading.jl:2739 │ [4] macro expansion │ @ loading.jl:2653 [inlined] │ [5] macro expansion │ @ lock.jl:376 [inlined] │ [6] __require(into::Module, mod::Symbol) │ @ Base loading.jl:2617 │ [7] require(into::Module, mod::Symbol) │ @ Base loading.jl:2593 [inlined] │ [8] eval_import_path(at::Module, from::Nothing, path::Expr, keyword::String) │ @ Base module.jl:36 [inlined] │ [9] eval_import_path_all(at::Module, path::Expr, keyword::String) │ @ Base module.jl:60 │ [10] _eval_using(to::Module, path::Expr, flags::UInt8) │ @ Base module.jl:137 [inlined] │ [11] top-level scope │ @ ~/.julia/packages/MendelImpute/z2M6N/src/MendelImpute.jl:5 │ [12] include(mod::Module, _path::String) │ @ Base Base.jl:329 │ [13] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) │ @ Base loading.jl:3359 │ [14] top-level scope │ @ stdin:5 │ in expression starting at /home/pkgeval/.julia/packages/MendelImpute/z2M6N/src/MendelImpute.jl:1 │ in expression starting at stdin:5 └ ┌ LazyArrays │ WARNING: Constructor for type "MemoryLayout" was extended in `LazyArrays` without explicit qualification or import. │ NOTE: Assumed "MemoryLayout" refers to `ArrayLayouts.MemoryLayout`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function MemoryLayout end`. │ Hint: To silence the warning, qualify `MemoryLayout` as `ArrayLayouts.MemoryLayout` in the method signature or explicitly `import ArrayLayouts: MemoryLayout`. └ ERROR: LoadError: The following 2 packages failed to precompile: SnpArrays Failed to precompile SnpArrays [4e780e97-f5bf-4111-9dc4-b70aaf691b06] to "/home/pkgeval/.julia/compiled/v1.14/SnpArrays/jl_Bw7b3v" (ProcessSignaled(6)). MendelImpute Failed to precompile MendelImpute [e47305d1-6a61-5370-bc5d-77554d143183] to "/home/pkgeval/.julia/compiled/v1.14/MendelImpute/jl_eD3kXn" (ProcessExited(1)). in expression starting at /PkgEval.jl/scripts/precompile.jl:34 Precompilation failed after 1124.02s ################################################################################ # Testing # Testing MendelImpute Status `/tmp/jl_wYdwcm/Project.toml` ⌅ [6db4b851] BGEN v0.1.17 [6e4b80f9] BenchmarkTools v1.8.0 [336ed68f] CSV v0.10.16 [a93c6f00] DataFrames v1.8.2 [b4f34e82] Distances v0.10.12 [5789e2e9] FileIO v1.20.0 ⌅ [53c48c17] FixedPointNumbers v0.8.6 [d853e229] GroupSlices v0.0.3 ⌅ [033835bb] JLD2 v0.4.55 [9da8a3cd] JLSO v2.7.0 ⌅ [5078a376] LazyArrays v1.10.0 [e47305d1] MendelImpute v1.2.6 [92933f4c] ProgressMeter v1.11.0 [4e780e97] SnpArrays v0.3.23 [276daf66] SpecialFunctions v2.8.0 [10745b16] Statistics v1.11.1 [2913bbd2] StatsBase v0.34.12 [f3b207a7] StatsPlots v0.15.8 [a620830f] VCFTools v0.2.10 [28eba6e3] VariantCallFormat v0.5.9 [37e2e46d] LinearAlgebra v1.14.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_wYdwcm/Manifest.toml` [621f4979] AbstractFFTs v1.5.0 [1520ce14] AbstractTrees v0.4.5 [7d9f7c33] Accessors v0.1.45 [79e6a3ab] Adapt v4.7.0 [66dad0bd] AliasTables v1.1.3 [7d9fca2a] Arpack v0.5.4 [4fba245c] ArrayInterface v7.28.1 [4c555306] ArrayLayouts v1.12.2 [67c07d97] Automa v1.2.0 [13072b0f] AxisAlgorithms v1.1.0 ⌅ [6db4b851] BGEN v0.1.17 [28d598bf] BGZFStreams v0.3.2 [fbb218c0] BSON v0.3.9 [6e4b80f9] BenchmarkTools v1.8.0 [47718e42] BioGenerics v0.1.5 [d1d4a3ce] BitFlags v0.1.10 [62783981] BitTwiddlingConvenienceFunctions v0.1.6 [e1450e63] BufferedStreams v1.2.2 [2a0fbf3d] CPUSummary v0.2.7 [336ed68f] CSV v0.10.16 [d360d2e6] ChainRulesCore v1.26.1 [fb6a15b2] CloseOpenIntervals v0.1.13 [aaaa29a8] Clustering v0.15.8 [523fee87] CodecBzip2 v0.8.5 [ba30903b] CodecXz v0.7.4 [944b1d66] CodecZlib v0.7.8 [6b39b394] CodecZstd v0.8.7 [35d6a980] ColorSchemes v3.31.0 [3da002f7] ColorTypes v0.12.1 [c3611d14] ColorVectorSpace v0.11.0 [5ae59095] Colors v0.13.1 [861a8166] Combinatorics v1.1.0 [38540f10] CommonSolve v0.2.12 [f70d9fcc] CommonWorldInvalidations v1.1.1 [34da2185] Compat v4.18.1 [a33af91c] CompositionsBase v0.1.2 [f0e56b4a] ConcurrentUtilities v2.5.1 [187b0558] ConstructionBase v1.6.0 [d38c429a] Contour v0.6.3 [adafc99b] CpuId v0.3.1 [a8cc5b0e] Crayons v4.2.0 [a10d1c49] DBInterface v2.6.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.8.2 [864edb3b] DataStructures v0.19.6 [e2d170a0] DataValueInterfaces v1.0.0 [8bb1440f] DelimitedFiles v1.9.1 [b4f34e82] Distances v0.10.12 [31c24e10] Distributions v0.25.130 [ffbed154] DocStringExtensions v0.9.5 [460bff9d] ExceptionUnwrapping v0.1.11 [c87230d0] FFMPEG v0.4.5 [b86e33f2] FFTA v0.3.1 [5789e2e9] FileIO v1.20.0 [48062228] FilePathsBase v0.9.24 [1a297f60] FillArrays v1.17.0 ⌅ [53c48c17] FixedPointNumbers v0.8.6 [1fa38f19] Format v1.3.7 [28b8d3ca] GR v0.73.26 [a0844989] Gamma v1.1.0 [c27321d9] Glob v1.5.0 [42e2da0e] Grisu v1.0.2 [d853e229] GroupSlices v0.0.3 ⌅ [cd3eb016] HTTP v1.11.0 [3e5b6fbb] HostCPUFeatures v0.1.18 [34004b35] HypergeometricFunctions v0.3.29 [09f84164] HypothesisTests v0.11.8 [615f187c] IfElse v0.1.1 [842dd82b] InlineStrings v1.4.5 [18e54dd8] IntegerMathUtils v0.1.4 [a98d9a8b] Interpolations v0.16.3 [3587e190] InverseFunctions v0.1.17 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.6 [82899510] IteratorInterfaceExtensions v1.0.0 ⌅ [033835bb] JLD2 v0.4.55 [1019f520] JLFzf v0.1.11 [692b3bcd] JLLWrappers v1.8.0 [9da8a3cd] JLSO v2.7.0 [682c06a0] JSON v1.6.1 [5ab0869b] KernelDensity v0.6.12 [b964fa9f] LaTeXStrings v1.4.0 [23fbe1c1] Latexify v0.16.11 [10f19ff3] LayoutPointers v0.1.17 ⌅ [5078a376] LazyArrays v1.10.0 [2ab3a3ac] LogExpFunctions v1.0.1 [e6f89c97] LoggingExtras v1.2.0 [bdcacae8] LoopVectorization v0.12.174 [1914dd2f] MacroTools v0.5.16 [d125e4d3] ManualMemory v0.1.8 ⌅ [a3b82374] MatrixFactorizations v2.2.0 [739be429] MbedTLS v1.1.10 [442fdcdd] Measures v0.3.3 [f28f55f0] Memento v1.5.0 [e47305d1] MendelImpute v1.2.6 [e1d29d7a] Missings v1.2.0 [46d2c3a1] MuladdMacro v0.2.6 [6f286f6a] MultivariateStats v0.10.4 [77ba4419] NaNMath v1.1.4 [b8a86587] NearestNeighbors v0.4.29 [510215fc] Observables v0.5.5 [6fe1bfb0] OffsetArrays v1.17.0 [4d8831e6] OpenSSL v1.6.1 ⌅ [bac558e1] OrderedCollections v1.8.2 [90014a1f] PDMats v0.11.40 [69de0a69] Parsers v2.8.6 [ccf2f8ad] PlotThemes v3.3.0 [995b91a9] PlotUtils v1.4.4 [91a5bcdd] Plots v1.41.6 [1d0040c9] PolyesterWeave v0.2.2 [2dfb63ee] PooledArrays v1.4.3 [aea7be01] PrecompileTools v1.3.4 [21216c6a] Preferences v1.5.2 [08abe8d2] PrettyTables v3.4.2 [27ebfcd6] Primes v0.5.7 [92933f4c] ProgressMeter v1.11.0 [43287f4e] PtrArrays v1.4.0 [1fd47b50] QuadGK v2.11.3 [c84ed2f1] Ratios v0.4.5 [3cdcf5f2] RecipesBase v1.3.4 [01d81517] RecipesPipeline v0.6.12 [189a3867] Reexport v1.2.2 [05181044] RelocatableFolders v1.0.1 [ae029012] Requires v1.3.1 [79098fc4] Rmath v0.9.0 [f2b01f46] Roots v3.0.6 [fdea26ae] SIMD v3.7.2 [94e857df] SIMDTypes v0.1.0 [476501e8] SLEEFPirates v0.6.46 [0aa819cd] SQLite v1.8.1 [431bcebd] SciMLPublic v1.2.4 [6c6a2e73] Scratch v1.3.0 [91c51154] SentinelArrays v1.4.10 [992d4aef] Showoff v1.0.3 [777ac1f9] SimpleBufferStream v1.2.0 [4e780e97] SnpArrays v0.3.23 [a2af1166] SortingAlgorithms v1.2.3 [276daf66] SpecialFunctions v2.8.0 [860ef19b] StableRNGs v1.0.4 [aedffcd0] Static v1.4.4 [0d7ed370] StaticArrayInterface v1.10.0 [90137ffa] StaticArrays v1.9.18 [1e83bf80] StaticArraysCore v1.4.4 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.8.0 [2913bbd2] StatsBase v0.34.12 [4c63d2b9] StatsFuns v2.2.0 [f3b207a7] StatsPlots v0.15.8 [892a3eda] StringManipulation v0.4.6 [ec057cc2] StructUtils v2.8.2 [ab02a1b2] TableOperations v1.2.0 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.13.0 [62fd8b95] TensorCore v0.1.1 [8290d209] ThreadingUtilities v0.5.6 ⌅ [3bb67fe8] TranscodingStreams v0.9.13 [5c2747f8] URIs v1.6.1 [3a884ed6] UnPack v1.0.2 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Testing Running tests... julia: /source/src/staticdata.c:216: jl_object_in_image: Assertion `eyt_tree_is_in_range(&image_tree, (uintptr_t)obj) == in_image' failed. [2252] signal 6 (-6): Aborted in expression starting at none:0 unknown function (ip: 0x78d457963ebc) at /lib/x86_64-linux-gnu/libc.so.6 gsignal at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) abort at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x78d4578ff394) at /lib/x86_64-linux-gnu/libc.so.6 __assert_fail at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) jl_object_in_image at /source/src/staticdata.c:216:5 [inlined] jl_object_in_image at /source/src/staticdata.c:210:22 needs_uniquing at /source/src/staticdata.c:422:5 jl_insert_into_serialization_queue at /source/src/staticdata.c:606:45 jl_insert_into_serialization_queue at /source/src/staticdata.c:867:17 jl_serialize_reachable at /source/src/staticdata.c:1050:13 jl_save_system_image_to_stream at /source/src/staticdata.c:3098:9 [inlined] ijl_create_system_image at /source/src/staticdata.c:3473:5 ijl_write_compiler_output at /source/src/precompile.c:140:5 ijl_atexit_hook at /source/src/init.c:276:9 jl_repl_entrypoint at /source/src/jlapi.c:1157:9 main at /source/cli/loader_exe.c:117:15 unknown function (ip: 0x78d457900249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S Allocations: 6379257 (Pool: 6379018; Big: 239); GC: 11 ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("4e780e97-f5bf-4111-9dc4-b70aaf691b06"), "SnpArrays") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0) Stacktrace: [1] error(s::String) @ Base error.jl:56 [2] __require_prelocked(pkg::Base.PkgId, env::String) @ Base loading.jl:2891 [3] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base loading.jl:2739 [4] macro expansion @ loading.jl:2653 [inlined] [5] macro expansion @ lock.jl:376 [inlined] [6] __require(into::Module, mod::Symbol) @ Base loading.jl:2617 [7] require(into::Module, mod::Symbol) @ Base loading.jl:2593 [inlined] [8] eval_import_path(at::Module, from::Nothing, path::Expr, keyword::String) @ Base module.jl:36 [inlined] [9] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base module.jl:60 [10] _eval_using(to::Module, path::Expr, flags::UInt8) @ Base module.jl:137 [inlined] [11] top-level scope @ ~/.julia/packages/MendelImpute/z2M6N/src/MendelImpute.jl:5 [12] include(mod::Module, _path::String) @ Base Base.jl:329 [13] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base loading.jl:3359 [14] top-level scope @ stdin:5 in expression starting at /home/pkgeval/.julia/packages/MendelImpute/z2M6N/src/MendelImpute.jl:1 in expression starting at stdin:5 2 dependencies had output during precompilation: ┌ SnpArrays │ julia: /source/src/staticdata.c:216: jl_object_in_image: Assertion `eyt_tree_is_in_range(&image_tree, (uintptr_t)obj) == in_image' failed. │ │ [2252] signal 6 (-6): Aborted │ in expression starting at none:0 │ unknown function (ip: 0x78d457963ebc) at /lib/x86_64-linux-gnu/libc.so.6 │ gsignal at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) │ abort at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) │ unknown function (ip: 0x78d4578ff394) at /lib/x86_64-linux-gnu/libc.so.6 │ __assert_fail at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) │ jl_object_in_image at /source/src/staticdata.c:216:5 [inlined] │ jl_object_in_image at /source/src/staticdata.c:210:22 │ needs_uniquing at /source/src/staticdata.c:422:5 │ jl_insert_into_serialization_queue at /source/src/staticdata.c:606:45 │ jl_insert_into_serialization_queue at /source/src/staticdata.c:867:17 │ jl_serialize_reachable at /source/src/staticdata.c:1050:13 │ jl_save_system_image_to_stream at /source/src/staticdata.c:3098:9 [inlined] │ ijl_create_system_image at /source/src/staticdata.c:3473:5 │ ijl_write_compiler_output at /source/src/precompile.c:140:5 │ ijl_atexit_hook at /source/src/init.c:276:9 │ jl_repl_entrypoint at /source/src/jlapi.c:1157:9 │ main at /source/cli/loader_exe.c:117:15 │ unknown function (ip: 0x78d457900249) at /lib/x86_64-linux-gnu/libc.so.6 │ __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) │ unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S │ Allocations: 6379257 (Pool: 6379018; Big: 239); GC: 11 └ ┌ MendelImpute │ [Output was shown above] └ ERROR: LoadError: The following 2 packages failed to precompile: SnpArrays Failed to precompile SnpArrays [4e780e97-f5bf-4111-9dc4-b70aaf691b06] to "/home/pkgeval/.julia/compiled/v1.14/SnpArrays/jl_SLfWWa" (ProcessSignaled(6)). MendelImpute Failed to precompile MendelImpute [e47305d1-6a61-5370-bc5d-77554d143183] to "/home/pkgeval/.julia/compiled/v1.14/MendelImpute/jl_4yLvVd" (ProcessExited(1)). in expression starting at /home/pkgeval/.julia/packages/MendelImpute/z2M6N/test/runtests.jl:1 Testing failed after 49.52s ERROR: LoadError: Package MendelImpute errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3247 [3] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:587 [4] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172 [5] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [6] test(pkg::String; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [inlined] [7] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:223 in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 PkgEval failed after 1323.95s: package fails to precompile