Package evaluation to test DataManifest on Julia 1.14.0-DEV.2705 (2f35a920f0*) started at 2026-07-19T15:07:34.015 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 15.08s ################################################################################ # Installation # Installing DataManifest... Resolving package versions... Updating `~/.julia/environments/v1.14/Project.toml` [b8ee69ef] + DataManifest v0.36.1 Updating `~/.julia/environments/v1.14/Manifest.toml` [b8ee69ef] + DataManifest v0.36.1 [5c2747f8] + URIs v1.6.1 [0dad84c5] + ArgTools v1.2.0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0 [b27032c2] + LibCURL v1.0.0 [8f399da3] + Libdl v1.11.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [ca575930] + NetworkOptions v1.3.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.13.0 [9e88b42a] + Serialization v1.11.0 [f489334b] + StyledStrings v1.13.0 [fa267f1f] + TOML v1.0.3 [8dfed614] + Test v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.5.5+2 [deac9b47] + LibCURL_jll v8.21.0+0 [29816b5a] + LibSSH2_jll v1.11.103+0 [14a3606d] + MozillaCACerts_jll v2026.7.16 [458c3c95] + OpenSSL_jll v3.5.7+0 [83775a58] + Zlib_jll v1.3.2+0 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850ede] + nghttp2_jll v1.69.0+0 Installation completed after 1.21s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompiling project... 3.6 s ✓ CategoricalArrays 3.5 s ✓ DataManifest 2.2 s ✓ ThriftJuliaCompiler_jll ERROR: LoadError: UndefVarError: `X` not defined in `DimensionalData.Dimensions` Suggestion: define the const at top-level before running function that uses it (stricter Julia v1.12+ rule). Note: the binding state changed since the error occurred (was: 11, now: 0). Hint: a global variable of this name also exists in DimensionalData.Dimensions. - Also exported by DimensionalData (loaded but not imported in Main). Stacktrace: [1] var"#95#96"(T::Any, ::Any, ::Any) @ DimensionalData.Dimensions.Lookups ~/.julia/packages/DimensionalData/M9vEC/src/Lookups/utils.jl:78 [2] (::Core.GeneratedFunctionStub)(::UInt64, ::Method, ::Any, ::Any, ::Vararg{Any}) @ Base expr.jl:1844 [3] basetypeof(x::DimensionalData.Dimensions.X{Vector{Symbol}}) @ DimensionalData.Dimensions.Lookups ~/.julia/packages/DimensionalData/M9vEC/src/Lookups/utils.jl:73 [inlined] [4] _format(dim::DimensionalData.Dimensions.X{Vector{Symbol}}, axis::Base.OneTo{Int64}) @ DimensionalData.Dimensions ~/.julia/packages/DimensionalData/M9vEC/src/Dimensions/format.jl:47 [5] map(f::typeof(DimensionalData.Dimensions._format), t::Tuple{DimensionalData.Dimensions.X{Vector{Symbol}}, DimensionalData.Dimensions.Y{StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}}, s::Tuple{Base.OneTo{Int64}, Base.OneTo{Int64}}) @ Base tuple.jl:387 [inlined] [6] format(dims::Tuple{DimensionalData.Dimensions.X{Vector{Symbol}}, DimensionalData.Dimensions.Y{StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}}, axes::Tuple{Base.OneTo{Int64}, Base.OneTo{Int64}}) @ DimensionalData.Dimensions ~/.julia/packages/DimensionalData/M9vEC/src/Dimensions/format.jl:38 [inlined] [7] format(dims::Tuple{DimensionalData.Dimensions.X{Vector{Symbol}}, DimensionalData.Dimensions.Y{StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}}, A::Matrix{Float64}) @ DimensionalData.Dimensions ~/.julia/packages/DimensionalData/M9vEC/src/Dimensions/format.jl:35 [inlined] [8] DimensionalData.DimArray(data::Matrix{Float64}, dims::Tuple{DimensionalData.Dimensions.X{Vector{Symbol}}, DimensionalData.Dimensions.Y{StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}}; refdims::Tuple{}, name::DimensionalData.NoName, metadata::DimensionalData.Dimensions.Lookups.NoMetadata) @ DimensionalData ~/.julia/packages/DimensionalData/M9vEC/src/array/array.jl:455 [9] DimensionalData.DimArray(data::Matrix{Float64}, dims::Tuple{DimensionalData.Dimensions.X{Vector{Symbol}}, DimensionalData.Dimensions.Y{StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}}) @ DimensionalData ~/.julia/packages/DimensionalData/M9vEC/src/array/array.jl:452 [inlined] [10] zeros(::Core.TypeEgal{Float64}, dims::Tuple{DimensionalData.Dimensions.X{Vector{Symbol}}, DimensionalData.Dimensions.Y{StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}}; kw::@Kwargs{}) @ DimensionalData ~/.julia/packages/DimensionalData/M9vEC/src/array/array.jl:706 [inlined] [11] zeros(::Core.TypeEgal{Float64}, dims::Tuple{DimensionalData.Dimensions.X{Vector{Symbol}}, DimensionalData.Dimensions.Y{StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}}) @ DimensionalData ~/.julia/packages/DimensionalData/M9vEC/src/array/array.jl:704 [inlined] [12] zeros(dims::Tuple{DimensionalData.Dimensions.X{Vector{Symbol}}, DimensionalData.Dimensions.Y{StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}}; kw::@Kwargs{}) @ DimensionalData ~/.julia/packages/DimensionalData/M9vEC/src/array/array.jl:687 [inlined] [13] zeros(dim1::DimensionalData.Dimensions.X{Vector{Symbol}}, dims::DimensionalData.Dimensions.Y{StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}; kw::@Kwargs{}) @ DimensionalData ~/.julia/packages/DimensionalData/M9vEC/src/array/array.jl:686 [inlined] [14] macro expansion @ ~/.julia/packages/DimensionalData/M9vEC/src/precompile.jl:7 [inlined] [15] macro expansion @ ~/.julia/packages/PrecompileTools/QUxvR/src/workloads.jl:70 [inlined] [16] top-level scope @ ~/.julia/packages/DimensionalData/M9vEC/src/precompile.jl:82 [17] include(mapexpr::Function, mod::Module, _path::String) @ Base Base.jl:326 [18] top-level scope @ ~/.julia/packages/DimensionalData/M9vEC/src/DimensionalData.jl:112 [19] include(mod::Module, _path::String) @ Base Base.jl:325 [20] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base loading.jl:3359 [21] top-level scope @ stdin:5 [22] eval(m::Module, e::Any) @ Core boot.jl:545 [23] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base loading.jl:3186 [24] include_string(m::Module, txt::String, fname::String) @ Base loading.jl:3196 [inlined] [25] exec_options(opts::Base.JLOptions) @ Base client.jl:353 [26] _start() @ Base client.jl:596 in expression starting at /home/pkgeval/.julia/packages/DimensionalData/M9vEC/src/precompile.jl:1 in expression starting at /home/pkgeval/.julia/packages/DimensionalData/M9vEC/src/DimensionalData.jl:1 in expression starting at stdin:5 ✗ DimensionalData 4.4 s ✓ Thrift ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("0703355e-b756-11e9-17c0-8b28908087d0"), "DimensionalData") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0) Stacktrace: [1] error(s::String) @ Base error.jl:56 [2] __require_prelocked(pkg::Base.PkgId, env::String) @ Base loading.jl:2891 [3] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base loading.jl:2739 [4] macro expansion @ loading.jl:2653 [inlined] [5] macro expansion @ lock.jl:376 [inlined] [6] __require(into::Module, mod::Symbol) @ Base loading.jl:2617 [7] require(into::Module, mod::Symbol) @ Base loading.jl:2593 [inlined] [8] eval_import_path(at::Module, from::Nothing, path::Expr, keyword::String) @ Base module.jl:36 [inlined] [9] _eval_import(imported::Bool, to::Module, from::Nothing, paths::Expr) @ Base module.jl:111 [10] top-level scope @ ~/.julia/packages/DimensionalData/M9vEC/ext/DimensionalDataCategoricalArraysExt.jl:3 [11] include(mod::Module, _path::String) @ Base Base.jl:325 [12] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base loading.jl:3359 [13] top-level scope @ stdin:5 [14] eval(m::Module, e::Any) @ Core boot.jl:545 [15] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base loading.jl:3186 [16] include_string(m::Module, txt::String, fname::String) @ Base loading.jl:3196 [inlined] [17] exec_options(opts::Base.JLOptions) @ Base client.jl:353 [18] _start() @ Base client.jl:596 in expression starting at /home/pkgeval/.julia/packages/DimensionalData/M9vEC/ext/DimensionalDataCategoricalArraysExt.jl:1 in expression starting at stdin:5 ✗ DimensionalData → DimensionalDataCategoricalArraysExt ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("0703355e-b756-11e9-17c0-8b28908087d0"), "DimensionalData") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0) Stacktrace: [1] error(s::String) @ Base error.jl:56 [2] __require_prelocked(pkg::Base.PkgId, env::String) @ Base loading.jl:2891 [3] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base loading.jl:2739 [4] macro expansion @ loading.jl:2653 [inlined] [5] macro expansion @ lock.jl:376 [inlined] [6] __require(into::Module, mod::Symbol) @ Base loading.jl:2617 [7] require(into::Module, mod::Symbol) @ Base loading.jl:2593 [inlined] [8] eval_import_path(at::Module, from::Nothing, path::Expr, keyword::String) @ Base module.jl:36 [inlined] [9] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base module.jl:60 [10] _eval_using(to::Module, path::Expr, flags::UInt8) @ Base module.jl:137 [inlined] [11] top-level scope @ ~/.julia/packages/DimensionalData/M9vEC/ext/DimensionalDataDiskArraysExt.jl:8 [12] include(mod::Module, _path::String) @ Base Base.jl:325 [13] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base loading.jl:3359 [14] top-level scope @ stdin:5 [15] eval(m::Module, e::Any) @ Core boot.jl:545 [16] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base loading.jl:3186 [17] include_string(m::Module, txt::String, fname::String) @ Base loading.jl:3196 [inlined] [18] exec_options(opts::Base.JLOptions) @ Base client.jl:353 [19] _start() @ Base client.jl:596 in expression starting at /home/pkgeval/.julia/packages/DimensionalData/M9vEC/ext/DimensionalDataDiskArraysExt.jl:1 in expression starting at stdin:5 ✗ DimensionalData → DimensionalDataDiskArraysExt 5.8 s ✓ Parquet 5 dependencies successfully precompiled in 44 seconds. 140 already precompiled. Precompilation completed after 86.15s ################################################################################ # Testing # Testing DataManifest Status `/tmp/jl_ZHamea/Project.toml` [336ed68f] CSV v0.10.16 [944b1d66] CodecZlib v0.7.8 [a93c6f00] DataFrames v1.8.2 [b8ee69ef] DataManifest v0.36.1 ⌃ [0703355e] DimensionalData v0.29.12 [682c06a0] JSON v1.6.1 [85f8d34a] NCDatasets v0.14.15 [bac558e1] OrderedCollections v2.0.1 [626c502c] Parquet v0.8.6 [5c2747f8] URIs v1.6.1 [ddb6d928] YAML v0.4.16 [a5390f91] ZipFile v0.10.1 [ade2ca70] Dates v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [56ddb016] Logging v1.11.0 [ea8e919c] SHA v1.13.0 [9e88b42a] Serialization v1.11.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_ZHamea/Manifest.toml` [79e6a3ab] Adapt v4.7.0 [4fba245c] ArrayInterface v7.27.0 [fa961155] CEnum v0.5.0 [179af706] CFTime v0.2.10 [336ed68f] CSV v0.10.16 ⌃ [324d7699] CategoricalArrays v0.10.7 [944b1d66] CodecZlib v0.7.8 [6b39b394] CodecZstd v0.8.7 [1fbeeb36] CommonDataModel v0.4.4 [34da2185] Compat v4.18.1 [187b0558] ConstructionBase v1.6.0 [a8cc5b0e] Crayons v4.2.0 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.8.2 [b8ee69ef] DataManifest v0.36.1 [864edb3b] DataStructures v0.19.6 [e2d170a0] DataValueInterfaces v1.0.0 ⌅ [abce61dc] Decimals v0.4.1 ⌃ [0703355e] DimensionalData v0.29.12 [3c3547ce] DiskArrays v0.4.22 [411431e0] Extents v0.1.6 [48062228] FilePathsBase v0.9.24 [842dd82b] InlineStrings v1.4.5 [85a1e053] Interfaces v0.3.2 [8197267c] IntervalSets v0.7.14 [41ab1584] InvertedIndices v1.3.1 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.8.0 [682c06a0] JSON v1.6.1 [8ac3fa9e] LRUCache v1.6.2 [b964fa9f] LaTeXStrings v1.4.0 [1724a1d5] LittleEndianBase128 v0.3.0 [3da0fdf6] MPIPreferences v0.1.12 [e1d29d7a] Missings v1.2.0 [85f8d34a] NCDatasets v0.14.15 [6fe1bfb0] OffsetArrays v1.17.0 [bac558e1] OrderedCollections v2.0.1 [626c502c] Parquet v0.8.6 [69de0a69] Parsers v2.8.6 [2dfb63ee] PooledArrays v1.4.3 [aea7be01] PrecompileTools v1.3.4 [21216c6a] Preferences v1.5.2 [08abe8d2] PrettyTables v3.4.2 [3cdcf5f2] RecipesBase v1.3.4 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [91c51154] SentinelArrays v1.4.10 [59d4ed8c] Snappy v0.4.3 [a2af1166] SortingAlgorithms v1.2.3 [10745b16] Statistics v1.11.1 [69024149] StringEncodings v0.3.7 [892a3eda] StringManipulation v0.4.5 [ec057cc2] StructUtils v2.8.2 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.13.0 [8d9c9c80] Thrift v0.8.6 [3bb67fe8] TranscodingStreams v0.11.3 [5c2747f8] URIs v1.6.1 [ea10d353] WeakRefStrings v1.4.3 [76eceee3] WorkerUtilities v1.6.1 [ddb6d928] YAML v0.4.16 [a5390f91] ZipFile v0.10.1 [0b7ba130] Blosc_jll v1.21.7+0 [6e34b625] Bzip2_jll v1.0.9+0 [0234f1f7] HDF5_jll v2.1.2+0 [e33a78d0] Hwloc_jll v2.14.0+0 [94ce4f54] Libiconv_jll v1.18.0+0 [5ced341a] Lz4_jll v1.10.1+0 [b5ada748] MPIABI_jll v0.1.5+0 [7cb0a576] MPICH_jll v5.0.1+0 [f1f71cc9] MPItrampoline_jll v5.5.6+0 [9237b28f] MicrosoftMPI_jll v10.1.4+3 [7243133f] NetCDF_jll v401.1000.0+0 [fe0851c0] OpenMPI_jll v5.0.11+0 [815b9798] ThriftJuliaCompiler_jll v0.12.1+0 ⌅ [02c8fc9c] XML2_jll v2.13.9+0 [ffd25f8a] XZ_jll v5.8.3+0 [a65dc6b1] Xorg_libpciaccess_jll v0.19.0+0 ⌅ [2b3700d1] aws_c_auth_jll v0.9.6+0 [70f11efc] aws_c_cal_jll v0.9.13+0 [73048d1d] aws_c_common_jll v0.12.6+0 [73a04cd5] aws_c_compression_jll v0.3.2+0 [3254fc65] aws_c_http_jll v0.10.13+0 [13c41daa] aws_c_io_jll v0.26.3+0 ⌅ [bd1f34fb] aws_c_s3_jll v0.11.5+0 [1282aa60] aws_c_sdkutils_jll v0.2.4+1 [b2a88e68] aws_checksums_jll v0.2.10+0 [c4b69c83] dlfcn_win32_jll v1.4.2+0 [477f73a3] libaec_jll v1.1.7+0 [337d8026] libzip_jll v1.11.3+0 [9aeb927a] mpif_jll v0.1.7+0 [cddc5d3d] s2n_tls_jll v1.7.3+0 [fe1e1685] snappy_jll v1.2.3+0 [0dad84c5] ArgTools v1.2.0 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v1.0.0 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.14.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.14.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.13.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.13.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.5.5+2 [deac9b47] LibCURL_jll v8.21.0+0 [e37daf67] LibGit2_jll v1.9.4+0 [29816b5a] LibSSH2_jll v1.11.103+0 [14a3606d] MozillaCACerts_jll v2026.7.16 [4536629a] OpenBLAS_jll v0.3.33+0 [458c3c95] OpenSSL_jll v3.5.7+0 [efcefdf7] PCRE2_jll v10.47.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.2+0 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.69.0+0 [3f19e933] p7zip_jll v17.8.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... ┌ DataManifest Legacy manifest form detected (flat julia=/loader= fields or [_LOADERS] table). Call DataManifest.migrate(path) to update to v1 _LANG format. └ @ DataManifest.Config ~/.julia/packages/DataManifest/W3Rrk/src/Config.jl:23 ┌ DataManifest canonical TOML output: the `datamanifest` (Python) CLI was found neither next to the manifest (.venv) nor on PATH; writing native TOML (semantically identical; cross-tool byte-identity needs the peer CLI). └ @ DataManifest.Config ~/.julia/packages/DataManifest/W3Rrk/src/Config.jl:23 ┌ DataManifest Found host/f.txt in read pool at /tmp/jl_ZNYQgG/host/f.txt but its checksum does not match (manifest sha256:00000000000…, on disk 1e7eda566c76…); not adopted. Update/clear the manifest checksum or set skip_checksum if stale. └ @ DataManifest.Config ~/.julia/packages/DataManifest/W3Rrk/src/Config.jl:23 [ DataManifest Lazy access (not downloaded): s3://bucket/data.bin [ DataManifest Lazy access (not downloaded): s3://bucket/data.bin [ DataManifest Downloading dataset: gs://b/x.nc to /tmp/jl_zJSach/store2/b/x.nc [ DataManifest Dataset already exists at: /home/pkgeval/.julia/packages/DataManifest/W3Rrk/test/test-data/data_file.txt [ DataManifest Dataset already exists at: /tmp/DataManifest_lp_jJgvys/data/in_repo.txt [ DataManifest Downloading dataset: file:///home/pkgeval/.julia/packages/DataManifest/W3Rrk/test/test-data/data_file.txt to /tmp/DataManifest_lp_fetch_c0dENr/fetched/data_file.txt storage_path (override the cache location): Error During Test at /home/pkgeval/.julia/packages/DataManifest/W3Rrk/test/runtests.jl:790 Test threw exception Expression: download_dataset(db_fetch, "fetch_local") == fetched_path IOError: could not spawn `rsync -arvzL /home/pkgeval/.julia/packages/DataManifest/W3Rrk/test/test-data/data_file.txt /tmp/DataManifest_lp_fetch_c0dENr/fetched/`: no such file or directory (ENOENT) Stacktrace: [1] _spawn_primitive(file::String, cmd::Cmd, stdio::Memory{Union{RawFD, Base.IOServer, Base.SyncCloseFD, IO}}) @ Base process.jl:148 [2] _spawn(cmd::Cmd, stdios::Memory{Union{RawFD, Base.IOServer, Base.SyncCloseFD, IO}}) @ Base process.jl:165 [inlined] [3] (::Base.var"#_spawn##0#_spawn##1"{Cmd})(stdios::Memory{Union{RawFD, Base.IOServer, Base.SyncCloseFD, IO}}) @ Base process.jl:157 [inlined] [4] setup_stdios(f::Base.var"#_spawn##0#_spawn##1"{Cmd}, stdios::Vector{Union{RawFD, Base.FileRedirect, Base.IOServer, IO}}) @ Base process.jl:244 [5] _spawn(cmd::Cmd, stdios::Vector{Union{RawFD, Base.FileRedirect, Base.IOServer, IO}}) @ Base process.jl:156 [inlined] [6] run(::Cmd; wait::Bool) @ Base process.jl:524 [7] run(::Cmd) @ Base process.jl:522 [inlined] [8] _download_dataset(dataset::DatasetEntry, download_path::String; project_root::String, overwrite::Bool, required_paths_by_ref::Dict{String, String}, required_paths_ordered::Vector{String}, loaders_julia_modules::Vector{String}, db::Database) @ DataManifest.PipeLines ~/.julia/packages/DataManifest/W3Rrk/src/PipeLines.jl:706 [9] (::DataManifest.PipeLines.var"#39#40"{Bool, Database, DatasetEntry, Vector{String}, Dict{String, String}, String})(tmp::String) @ DataManifest.PipeLines ~/.julia/packages/DataManifest/W3Rrk/src/PipeLines.jl:842 [inlined] [10] materialize(write_fn::DataManifest.PipeLines.var"#39#40"{Bool, Database, DatasetEntry, Vector{String}, Dict{String, String}, String}, target::String; on_locked::Symbol, stale_age::Float64, skip_if::DataManifest.PipeLines.var"#41#42"{Bool}) @ DataManifest.PipeLines ~/.julia/packages/DataManifest/W3Rrk/src/PipeLines.jl:536 [11] download_dataset(db::Database, dataset::DatasetEntry; extract::Nothing, overwrite::Bool, kwargs::@Kwargs{}) @ DataManifest.PipeLines ~/.julia/packages/DataManifest/W3Rrk/src/PipeLines.jl:840 [12] download_dataset(db::Database, name::String; extract::Nothing, overwrite::Bool, kwargs::@Kwargs{}) @ DataManifest.PipeLines ~/.julia/packages/DataManifest/W3Rrk/src/PipeLines.jl:878 [13] download_dataset(db::Database, name::String) @ DataManifest.PipeLines ~/.julia/packages/DataManifest/W3Rrk/src/PipeLines.jl:871 [14] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:781 [inlined] [15] macro expansion @ ~/.julia/packages/DataManifest/W3Rrk/test/runtests.jl:790 [inlined] [16] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2246 [inlined] [17] macro expansion @ ~/.julia/packages/DataManifest/W3Rrk/test/runtests.jl:742 [inlined] [18] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2246 [inlined] [19] top-level scope @ ~/.julia/packages/DataManifest/W3Rrk/test/runtests.jl:80 storage_path (override the cache location): Test Failed at /home/pkgeval/.julia/packages/DataManifest/W3Rrk/test/runtests.jl:791 Expression: isfile(fetched_path) Evaluated: isfile("/tmp/DataManifest_lp_fetch_c0dENr/fetched/data_file.txt") Stacktrace: [1] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:784 [inlined] [2] macro expansion @ ~/.julia/packages/DataManifest/W3Rrk/test/runtests.jl:791 [inlined] [3] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2246 [inlined] [4] macro expansion @ ~/.julia/packages/DataManifest/W3Rrk/test/runtests.jl:742 [inlined] [5] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2246 [inlined] [6] top-level scope @ ~/.julia/packages/DataManifest/W3Rrk/test/runtests.jl:80 [ DataManifest Skipping download for dataset: https://protected.example.com/missing.txt (skip_download=true) [ DataManifest Dataset already exists at: /tmp/DataManifest_lp_jJgvys/data/in_repo.txt [ DataManifest Downloading dataset: to /tmp/DataManifest_test_MmY0dF/cmd-test/templating [ DataManifest Downloading dataset: to /tmp/DataManifest_test_MmY0dF/julia-cmd-test/result [ DataManifest Downloading dataset: https://example.com/supplement.csv to /tmp/DataManifest_test_MmY0dF/julia-vars/out [ DataManifest Downloading dataset: to /tmp/DataManifest_test_MmY0dF/julia-modules-test/out [ DataManifest Downloading dataset: to /tmp/DataManifest_test_MmY0dF/julia-includes-test/out [ DataManifest Dataset already exists at: /tmp/DataManifest_test_MmY0dF/julia-includes-test/out [ DataManifest Downloading dataset: file:///home/pkgeval/.julia/packages/DataManifest/W3Rrk/test/test-data/data_file.txt to /tmp/DataManifest_test_MmY0dF/test-data/data_file.txt [ DataManifest Downloading dataset: file:///home/pkgeval/.julia/packages/DataManifest/W3Rrk/test/test-data/data_file.txt to /tmp/DataManifest_test_MmY0dF/test-data/data_file.txt load_dataset: Error During Test at /home/pkgeval/.julia/packages/DataManifest/W3Rrk/test/runtests.jl:897 Got exception outside of a @test IOError: could not spawn `rsync -arvzL /home/pkgeval/.julia/packages/DataManifest/W3Rrk/test/test-data/data_file.txt /tmp/DataManifest_test_MmY0dF/test-data/`: no such file or directory (ENOENT) Stacktrace: [1] _spawn_primitive(file::String, cmd::Cmd, stdio::Memory{Union{RawFD, Base.IOServer, Base.SyncCloseFD, IO}}) @ Base process.jl:148 [2] _spawn(cmd::Cmd, stdios::Memory{Union{RawFD, Base.IOServer, Base.SyncCloseFD, IO}}) @ Base process.jl:165 [inlined] [3] (::Base.var"#_spawn##0#_spawn##1"{Cmd})(stdios::Memory{Union{RawFD, Base.IOServer, Base.SyncCloseFD, IO}}) @ Base process.jl:157 [inlined] [4] setup_stdios(f::Base.var"#_spawn##0#_spawn##1"{Cmd}, stdios::Vector{Union{RawFD, Base.FileRedirect, Base.IOServer, IO}}) @ Base process.jl:244 [5] _spawn(cmd::Cmd, stdios::Vector{Union{RawFD, Base.FileRedirect, Base.IOServer, IO}}) @ Base process.jl:156 [inlined] [6] run(::Cmd; wait::Bool) @ Base process.jl:524 [7] run(::Cmd) @ Base process.jl:522 [inlined] [8] _download_dataset(dataset::DatasetEntry, download_path::String; project_root::String, overwrite::Bool, required_paths_by_ref::Dict{String, String}, required_paths_ordered::Vector{String}, loaders_julia_modules::Vector{String}, db::Database) @ DataManifest.PipeLines ~/.julia/packages/DataManifest/W3Rrk/src/PipeLines.jl:706 [9] (::DataManifest.PipeLines.var"#39#40"{Bool, Database, DatasetEntry, Vector{String}, Dict{String, String}, String})(tmp::String) @ DataManifest.PipeLines ~/.julia/packages/DataManifest/W3Rrk/src/PipeLines.jl:842 [inlined] [10] materialize(write_fn::DataManifest.PipeLines.var"#39#40"{Bool, Database, DatasetEntry, Vector{String}, Dict{String, String}, String}, target::String; on_locked::Symbol, stale_age::Float64, skip_if::DataManifest.PipeLines.var"#41#42"{Bool}) @ DataManifest.PipeLines ~/.julia/packages/DataManifest/W3Rrk/src/PipeLines.jl:536 [11] download_dataset(db::Database, dataset::DatasetEntry; extract::Nothing, overwrite::Bool, kwargs::@Kwargs{}) @ DataManifest.PipeLines ~/.julia/packages/DataManifest/W3Rrk/src/PipeLines.jl:840 [12] download_dataset(db::Database, dataset::DatasetEntry) @ DataManifest.PipeLines ~/.julia/packages/DataManifest/W3Rrk/src/PipeLines.jl:748 [inlined] [13] load_dataset(db::Database, entry::DatasetEntry; loader::var"#173#174", kwargs::@Kwargs{}) @ DataManifest.PipeLines ~/.julia/packages/DataManifest/W3Rrk/src/PipeLines.jl:1013 [inlined] [14] load_dataset(db::Database, name::String; loader::Function, kwargs::@Kwargs{}) @ DataManifest.PipeLines ~/.julia/packages/DataManifest/W3Rrk/src/PipeLines.jl:987 [15] macro expansion @ ~/.julia/packages/DataManifest/W3Rrk/test/runtests.jl:903 [inlined] [16] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2246 [inlined] [17] macro expansion @ ~/.julia/packages/DataManifest/W3Rrk/test/runtests.jl:898 [inlined] [18] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2246 [inlined] [19] top-level scope @ ~/.julia/packages/DataManifest/W3Rrk/test/runtests.jl:80 [20] include(mapexpr::Function, mod::Module, _path::String) @ Base Base.jl:326 [21] top-level scope @ none:6 [22] eval(m::Module, e::Any) @ Core boot.jl:545 [23] exec_options(opts::Base.JLOptions) @ Base client.jl:321 [24] _start() @ Base client.jl:596 [ DataManifest Downloading dataset: https://download.pangaea.de/dataset/962852/files/LGM_foraminifera_assemblages_20240110.csv to /tmp/DataManifest_test_MmY0dF/download.pangaea.de/dataset/962852/files/LGM_foraminifera_assemblages_20240110.csv [ DataManifest Downloading dataset: https://doi.pangaea.de/10.1594/PANGAEA.930512?format=zip to /tmp/DataManifest_test_MmY0dF/doi.pangaea.de/10.1594/PANGAEA.930512 [ DataManifest Dataset already exists at: /tmp/DataManifest_test_MmY0dF/download.pangaea.de/dataset/962852/files/LGM_foraminifera_assemblages_20240110.csv [ DataManifest Downloading dataset: file:///home/pkgeval/.julia/packages/DataManifest/W3Rrk/test/test-data/data_file.txt to /tmp/DataManifest_test_MmY0dF/test-data/data_file.txt [ Info: Skipping download_datasets test (offline or error): Base.IOError("could not spawn `rsync -arvzL /home/pkgeval/.julia/packages/DataManifest/W3Rrk/test/test-data/data_file.txt /tmp/DataManifest_test_MmY0dF/test-data/`: no such file or directory (ENOENT)", -2) [ DataManifest Downloading dataset: file:///home/pkgeval/.julia/packages/DataManifest/W3Rrk/test/test-data/data_file.txt to /tmp/DataManifest_test_MmY0dF/test-data/data_file.txt delete_dataset: Test Failed at /home/pkgeval/.julia/packages/DataManifest/W3Rrk/test/runtests.jl:1029 Expression: isfile(path) Evaluated: isfile("/tmp/DataManifest_test_MmY0dF/test-data/data_file.txt") Stacktrace: [1] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:784 [inlined] [2] macro expansion @ ~/.julia/packages/DataManifest/W3Rrk/test/runtests.jl:1029 [inlined] [3] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2246 [inlined] [4] macro expansion @ ~/.julia/packages/DataManifest/W3Rrk/test/runtests.jl:1020 [inlined] [5] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2246 [inlined] [6] top-level scope @ ~/.julia/packages/DataManifest/W3Rrk/test/runtests.jl:80 [ DataManifest Downloading dataset: file:///home/pkgeval/.julia/packages/DataManifest/W3Rrk/test/test-data/data_file.txt to /tmp/DataManifest_test_MmY0dF/test-data/data_file.txt [ DataManifest Downloading dataset: file:///home/pkgeval/.julia/packages/DataManifest/W3Rrk/test/test-data/data_file.txt to /tmp/DataManifest_test_MmY0dF/test-data/data_file.txt [ Info: Skipping requires test (offline or error): Base.IOError("could not spawn `rsync -arvzL /home/pkgeval/.julia/packages/DataManifest/W3Rrk/test/test-data/data_file.txt /tmp/DataManifest_test_MmY0dF/test-data/`: no such file or directory (ENOENT)", -2) [ DataManifest Downloading dataset: file:///home/pkgeval/.julia/packages/DataManifest/W3Rrk/test/test-data/data_file.txt to /tmp/DataManifest_test_MmY0dF/test-data/data_file.txt [ Info: Skipping path template test: Base.IOError("could not spawn `rsync -arvzL /home/pkgeval/.julia/packages/DataManifest/W3Rrk/test/test-data/data_file.txt /tmp/DataManifest_test_MmY0dF/test-data/`: no such file or directory (ENOENT)", -2) [ DataManifest Dataset already exists at: /tmp/DataManifest_test_MmY0dF/download.pangaea.de/dataset/962852/files/LGM_foraminifera_assemblages_20240110.csv [ DataManifest Downloading dataset: https://download.pangaea.de/dataset/962852/files/LGM_foraminifera_assemblages_20240110.csv to /tmp/DataManifest_test_MmY0dF/download.pangaea.de/dataset/962852/files/LGM_foraminifera_assemblages_20240110.csv ERROR: LoadError: UndefVarError: `X` not defined in `DimensionalData.Dimensions` Suggestion: define the const at top-level before running function that uses it (stricter Julia v1.12+ rule). Note: the binding state changed since the error occurred (was: 11, now: 0). Hint: a global variable of this name also exists in DimensionalData.Dimensions. - Also exported by DimensionalData (loaded but not imported in Main). Stacktrace: [1] var"#95#96"(T::Any, ::Any, ::Any) @ DimensionalData.Dimensions.Lookups ~/.julia/packages/DimensionalData/M9vEC/src/Lookups/utils.jl:78 [2] (::Core.GeneratedFunctionStub)(::UInt64, ::Method, ::Any, ::Any, ::Vararg{Any}) @ Base expr.jl:1844 [3] basetypeof(x::DimensionalData.Dimensions.X{Vector{Symbol}}) @ DimensionalData.Dimensions.Lookups ~/.julia/packages/DimensionalData/M9vEC/src/Lookups/utils.jl:73 [inlined] [4] _format(dim::DimensionalData.Dimensions.X{Vector{Symbol}}, axis::Base.OneTo{Int64}) @ DimensionalData.Dimensions ~/.julia/packages/DimensionalData/M9vEC/src/Dimensions/format.jl:47 [5] map(f::typeof(DimensionalData.Dimensions._format), t::Tuple{DimensionalData.Dimensions.X{Vector{Symbol}}, DimensionalData.Dimensions.Y{StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}}, s::Tuple{Base.OneTo{Int64}, Base.OneTo{Int64}}) @ Base tuple.jl:387 [inlined] [6] format(dims::Tuple{DimensionalData.Dimensions.X{Vector{Symbol}}, DimensionalData.Dimensions.Y{StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}}, axes::Tuple{Base.OneTo{Int64}, Base.OneTo{Int64}}) @ DimensionalData.Dimensions ~/.julia/packages/DimensionalData/M9vEC/src/Dimensions/format.jl:38 [inlined] [7] format(dims::Tuple{DimensionalData.Dimensions.X{Vector{Symbol}}, DimensionalData.Dimensions.Y{StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}}, A::Matrix{Float64}) @ DimensionalData.Dimensions ~/.julia/packages/DimensionalData/M9vEC/src/Dimensions/format.jl:35 [inlined] [8] DimensionalData.DimArray(data::Matrix{Float64}, dims::Tuple{DimensionalData.Dimensions.X{Vector{Symbol}}, DimensionalData.Dimensions.Y{StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}}; refdims::Tuple{}, name::DimensionalData.NoName, metadata::DimensionalData.Dimensions.Lookups.NoMetadata) @ DimensionalData ~/.julia/packages/DimensionalData/M9vEC/src/array/array.jl:455 [9] DimensionalData.DimArray(data::Matrix{Float64}, dims::Tuple{DimensionalData.Dimensions.X{Vector{Symbol}}, DimensionalData.Dimensions.Y{StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}}) @ DimensionalData ~/.julia/packages/DimensionalData/M9vEC/src/array/array.jl:452 [inlined] [10] zeros(::Core.TypeEgal{Float64}, dims::Tuple{DimensionalData.Dimensions.X{Vector{Symbol}}, DimensionalData.Dimensions.Y{StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}}; kw::@Kwargs{}) @ DimensionalData ~/.julia/packages/DimensionalData/M9vEC/src/array/array.jl:706 [inlined] [11] zeros(::Core.TypeEgal{Float64}, dims::Tuple{DimensionalData.Dimensions.X{Vector{Symbol}}, DimensionalData.Dimensions.Y{StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}}) @ DimensionalData ~/.julia/packages/DimensionalData/M9vEC/src/array/array.jl:704 [inlined] [12] zeros(dims::Tuple{DimensionalData.Dimensions.X{Vector{Symbol}}, DimensionalData.Dimensions.Y{StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}}; kw::@Kwargs{}) @ DimensionalData ~/.julia/packages/DimensionalData/M9vEC/src/array/array.jl:687 [inlined] [13] zeros(dim1::DimensionalData.Dimensions.X{Vector{Symbol}}, dims::DimensionalData.Dimensions.Y{StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}; kw::@Kwargs{}) @ DimensionalData ~/.julia/packages/DimensionalData/M9vEC/src/array/array.jl:686 [inlined] [14] macro expansion @ ~/.julia/packages/DimensionalData/M9vEC/src/precompile.jl:7 [inlined] [15] macro expansion @ ~/.julia/packages/PrecompileTools/QUxvR/src/workloads.jl:70 [inlined] [16] top-level scope @ ~/.julia/packages/DimensionalData/M9vEC/src/precompile.jl:82 [17] include(mapexpr::Function, mod::Module, _path::String) @ Base Base.jl:326 [18] top-level scope @ ~/.julia/packages/DimensionalData/M9vEC/src/DimensionalData.jl:112 [19] include(mod::Module, _path::String) @ Base Base.jl:325 [20] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base loading.jl:3359 [21] top-level scope @ stdin:5 [22] eval(m::Module, e::Any) @ Core boot.jl:545 [23] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base loading.jl:3186 [24] include_string(m::Module, txt::String, fname::String) @ Base loading.jl:3196 [inlined] [25] exec_options(opts::Base.JLOptions) @ Base client.jl:353 [26] _start() @ Base client.jl:596 in expression starting at /home/pkgeval/.julia/packages/DimensionalData/M9vEC/src/precompile.jl:1 in expression starting at /home/pkgeval/.julia/packages/DimensionalData/M9vEC/src/DimensionalData.jl:1 in expression starting at stdin:5 1 dependency had output during precompilation: ┌ DimensionalData │ [Output was shown above] └ DefaultLoaders: Error During Test at /home/pkgeval/.julia/packages/DataManifest/W3Rrk/test/runtests.jl:1089 Got exception outside of a @test DefaultLoaders tests require test dependencies. Run: Pkg.test("DataManifest") (recommended), or add the packages listed in Project.toml [extras] to your environment. Original error: The following 1 package failed to precompile: DimensionalData Failed to precompile DimensionalData [0703355e-b756-11e9-17c0-8b28908087d0] to "/home/pkgeval/.julia/compiled/v1.14/DimensionalData/jl_ijG7Qd" (ProcessExited(1)). Stacktrace: [1] macro expansion @ ~/.julia/packages/DataManifest/W3Rrk/test/runtests.jl:1095 [inlined] [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2246 [inlined] [3] macro expansion @ ~/.julia/packages/DataManifest/W3Rrk/test/runtests.jl:1090 [inlined] [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2246 [inlined] [5] top-level scope @ ~/.julia/packages/DataManifest/W3Rrk/test/runtests.jl:80 [6] include(mapexpr::Function, mod::Module, _path::String) @ Base Base.jl:326 [7] top-level scope @ none:6 [8] eval(m::Module, e::Any) @ Core boot.jl:545 [9] exec_options(opts::Base.JLOptions) @ Base client.jl:321 [10] _start() @ Base client.jl:596 caused by: The following 1 package failed to precompile: DimensionalData Failed to precompile DimensionalData [0703355e-b756-11e9-17c0-8b28908087d0] to "/home/pkgeval/.julia/compiled/v1.14/DimensionalData/jl_ijG7Qd" (ProcessExited(1)). fatal: not a git repository (or any parent up to mount point /) Stopping at filesystem boundary (GIT_DISCOVERY_ACROSS_FILESYSTEM not set). fatal: not a git repository (or any parent up to mount point /) Stopping at filesystem boundary (GIT_DISCOVERY_ACROSS_FILESYSTEM not set). fatal: not a git repository (or any parent up to mount point /) Stopping at filesystem boundary (GIT_DISCOVERY_ACROSS_FILESYSTEM not set). fatal: not a git repository (or any parent up to mount point /) Stopping at filesystem boundary (GIT_DISCOVERY_ACROSS_FILESYSTEM not set). fatal: not a git repository (or any parent up to mount point /) Stopping at filesystem boundary (GIT_DISCOVERY_ACROSS_FILESYSTEM not set). fatal: not a git repository (or any parent up to mount point /) Stopping at filesystem boundary (GIT_DISCOVERY_ACROSS_FILESYSTEM not set). fatal: not a git repository (or any parent up to mount point /) Stopping at filesystem boundary (GIT_DISCOVERY_ACROSS_FILESYSTEM not set). fatal: not a git repository (or any parent up to mount point /) Stopping at filesystem boundary (GIT_DISCOVERY_ACROSS_FILESYSTEM not set). fatal: not a git repository (or any parent up to mount point /) Stopping at filesystem boundary (GIT_DISCOVERY_ACROSS_FILESYSTEM not set). fatal: not a git repository (or any parent up to mount point /) Stopping at filesystem boundary (GIT_DISCOVERY_ACROSS_FILESYSTEM not set). fatal: not a git repository (or any parent up to mount point /) Stopping at filesystem boundary (GIT_DISCOVERY_ACROSS_FILESYSTEM not set). fatal: not a git repository (or any parent up to mount point /) Stopping at filesystem boundary (GIT_DISCOVERY_ACROSS_FILESYSTEM not set). [ DataManifest Downloading dataset: file:///tmp/jl_DTXRCj/incoming.txt to /tmp/jl_DTXRCj/data/files/incoming.txt database-scoped caching (db= / cache bundles): Error During Test at /home/pkgeval/.julia/packages/DataManifest/W3Rrk/test/runtests.jl:1626 Got exception outside of a @test IOError: could not spawn `rsync -arvzL /tmp/jl_DTXRCj/incoming.txt /tmp/jl_DTXRCj/data/files/`: no such file or directory (ENOENT) Stacktrace: [1] _spawn_primitive(file::String, cmd::Cmd, stdio::Memory{Union{RawFD, Base.IOServer, Base.SyncCloseFD, IO}}) @ Base process.jl:148 [2] _spawn(cmd::Cmd, stdios::Memory{Union{RawFD, Base.IOServer, Base.SyncCloseFD, IO}}) @ Base process.jl:165 [inlined] [3] (::Base.var"#_spawn##0#_spawn##1"{Cmd})(stdios::Memory{Union{RawFD, Base.IOServer, Base.SyncCloseFD, IO}}) @ Base process.jl:157 [inlined] [4] setup_stdios(f::Base.var"#_spawn##0#_spawn##1"{Cmd}, stdios::Vector{Union{RawFD, Base.FileRedirect, Base.IOServer, IO}}) @ Base process.jl:244 [5] _spawn(cmd::Cmd, stdios::Vector{Union{RawFD, Base.FileRedirect, Base.IOServer, IO}}) @ Base process.jl:156 [inlined] [6] run(::Cmd; wait::Bool) @ Base process.jl:524 [7] run(::Cmd) @ Base process.jl:522 [inlined] [8] _download_dataset(dataset::DatasetEntry, download_path::String; project_root::String, overwrite::Bool, required_paths_by_ref::Dict{String, String}, required_paths_ordered::Vector{String}, loaders_julia_modules::Vector{String}, db::Database) @ DataManifest.PipeLines ~/.julia/packages/DataManifest/W3Rrk/src/PipeLines.jl:706 [9] (::DataManifest.PipeLines.var"#39#40"{Bool, Database, DatasetEntry, Vector{String}, Dict{String, String}, String})(tmp::String) @ DataManifest.PipeLines ~/.julia/packages/DataManifest/W3Rrk/src/PipeLines.jl:842 [inlined] [10] materialize(write_fn::DataManifest.PipeLines.var"#39#40"{Bool, Database, DatasetEntry, Vector{String}, Dict{String, String}, String}, target::String; on_locked::Symbol, stale_age::Float64, skip_if::DataManifest.PipeLines.var"#41#42"{Bool}) @ DataManifest.PipeLines ~/.julia/packages/DataManifest/W3Rrk/src/PipeLines.jl:536 [11] download_dataset(db::Database, dataset::DatasetEntry; extract::Nothing, overwrite::Bool, kwargs::@Kwargs{}) @ DataManifest.PipeLines ~/.julia/packages/DataManifest/W3Rrk/src/PipeLines.jl:840 [12] download_dataset(db::Database, name::String; extract::Nothing, overwrite::Bool, kwargs::@Kwargs{}) @ DataManifest.PipeLines ~/.julia/packages/DataManifest/W3Rrk/src/PipeLines.jl:878 [13] download_dataset(db::Database, name::String) @ DataManifest.PipeLines ~/.julia/packages/DataManifest/W3Rrk/src/PipeLines.jl:871 [inlined] [14] (::var"#301#302"{Database})() @ Main ~/.julia/packages/DataManifest/W3Rrk/test/runtests.jl:1697 [inlined] [15] cd(f::var"#301#302"{Database}, dir::String) @ Base.Filesystem file.jl:113 [16] macro expansion @ ~/.julia/packages/DataManifest/W3Rrk/test/runtests.jl:1697 [inlined] [17] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2246 [inlined] [18] macro expansion @ ~/.julia/packages/DataManifest/W3Rrk/test/runtests.jl:1627 [inlined] [19] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:2246 [inlined] [20] top-level scope @ ~/.julia/packages/DataManifest/W3Rrk/test/runtests.jl:80 [21] include(mapexpr::Function, mod::Module, _path::String) @ Base Base.jl:326 [22] top-level scope @ none:6 [23] eval(m::Module, e::Any) @ Core boot.jl:545 [24] exec_options(opts::Base.JLOptions) @ Base client.jl:321 [25] _start() @ Base client.jl:596 ┌ Warning: attempting to remove probably stale pidfile │ path = "/tmp/jl_NiiUQY/obj3.bin.lock" └ @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.14/FileWatching/src/pidfile.jl:251 ┌ Warning: attempting to remove probably stale pidfile │ path = "/tmp/jl_NiiUQY/obj3b.bin.lock" └ @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.14/FileWatching/src/pidfile.jl:251 fatal: not a git repository (or any parent up to mount point /) Stopping at filesystem boundary (GIT_DISCOVERY_ACROSS_FILESYSTEM not set). fatal: not a git repository (or any parent up to mount point /) Stopping at filesystem boundary (GIT_DISCOVERY_ACROSS_FILESYSTEM not set). fatal: not a git repository (or any parent up to mount point /) Stopping at filesystem boundary (GIT_DISCOVERY_ACROSS_FILESYSTEM not set). [ DataManifest Downloading dataset: to /tmp/jl_ZCwLyO/store/made Test Summary: | Pass Fail Error Total Time DataManifest.jl | 379 2 4 385 3m52.2s Registration | 4 4 0.5s DatasetEntry access | 5 5 0.7s Database string/repr | 2 2 0.1s Manifest filename discovery | 6 6 0.2s Path | 3 3 0.5s File format inference | 6 6 1.4s TOML | 13 13 6.0s canonical directive (config ladder + worktree CLI lookup) | 15 15 4.4s read pools (datasets_pools) | 8 8 4.9s spec-v4.3 lazy_access + identifier resolution | 11 11 11.7s spec-v5 two-folder storage | 27 27 5.6s spec-v5 scoped config files + ladder + state relocation | 17 17 3.3s git worktree has no state-file fallback | 3 3 1.0s description roundtrip | 5 5 2.2s uris (multiple URIs for one entry) | 12 12 5.2s storage_path (override the cache location) | 12 1 1 14 29.2s Command-based entry (templating) | 2 2 7.6s julia (inline Julia in isolated module) | 2 2 0.0s julia: uri, key, doi etc. in scope (same as shell template) | 4 4 1.3s julia: [_LOADERS].julia_modules applied to dataset julia code | 2 2 0.4s julia: [_LOADERS].julia_includes applied to loader context | 2 2 1.4s load_dataset | 1 1 0.4s Download (optional, may skip if offline) | 1 1 4.5s delete_dataset | 4 1 5 0.1s requires (dependency resolution) | 1 1 1.2s download_dataset overwrite | 1 1 0.2s DefaultLoaders | 1 1 56.6s validate_loaders | 3 3 5.8s Cache (@cached produce-or-load) | 62 62 23.8s format/ext decoupling + legacy-extension fallback | 14 14 2.4s shared format registry (datasets + cache) / loader=/saver= overrides | 23 23 4.0s database-scoped caching (db= / cache bundles) | 16 1 17 12.3s materialize lock semantics (spec-v5.2) | 24 24 7.4s with_lock consumer-side serialization (spec-v5.2) | 10 10 1.5s Cache index + usage + inspect (state file) | 38 38 3.5s spec-v3.3 bindings + delegation (rung 3) | 19 19 3.5s spec-v3.5 bare shell fetch (end-to-end) | 2 2 1.5s RNG of the outermost testset: Random.Xoshiro(0xc2ce6bb501a64a43, 0xf1b20e99edab09c3, 0xdffba7dafb73688d, 0xbc94f45e86f2b679, 0x1fe18d5f648b6f9c) ERROR: LoadError: Some tests did not pass: 379 passed, 2 failed, 4 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/DataManifest/W3Rrk/test/runtests.jl:78 Testing failed after 514.61s ERROR: LoadError: Package DataManifest errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3247 [3] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:587 [4] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172 [5] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [6] test(pkg::String; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [inlined] [7] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:223 [8] include(mod::Module, _path::String) @ Base Base.jl:325 [9] exec_options(opts::Base.JLOptions) @ Base client.jl:355 [10] _start() @ Base client.jl:596 in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 PkgEval failed after 663.03s: package fails to precompile